ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11l18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a mitochondrial intermediate peptidase (MIPEP) pseudogene and a CpG island, complete sequence Length = 198794 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 503 caagaccacataggtgaccaccacaag 529 |||||||||||||||||||| |||||| Sbjct: 192062 caagaccacataggtgaccagcacaag 192036
>gb|AC104516.2| Drosophila melanogaster clone BACR20O17, complete sequence Length = 174404 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gtccagctgagacaacacataa 53 |||||||||||||||||||||| Sbjct: 58733 gtccagctgagacaacacataa 58712
>gb|AC130817.4| Mus musculus BAC clone RP23-68J13 from 16, complete sequence Length = 193917 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 ccagtttccaggtcccaaagct 240 |||||||||||||||||||||| Sbjct: 59285 ccagtttccaggtcccaaagct 59306
>emb|X55450.1|ACFIXABC A.caulinodans fixABCX genes, involved in nitrogen fixation Length = 4089 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 cacccagcagcaggatctctgg 296 |||||||||||||||||||||| Sbjct: 1359 cacccagcagcaggatctctgg 1338
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete sequence Length = 297236 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gtccagctgagacaacacataa 53 |||||||||||||||||||||| Sbjct: 233408 gtccagctgagacaacacataa 233387
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tggatggaaatgaagatctaa 471 ||||||||||||||||||||| Sbjct: 50500 tggatggaaatgaagatctaa 50480
>ref|XM_322830.1| Neurospora crassa OR74A predicted protein (NCU03573.1) partial mRNA Length = 4530 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 cttcagctccagtttccaggt 231 ||||||||||||||||||||| Sbjct: 2325 cttcagctccagtttccaggt 2305
>ref|XM_950919.1| Neurospora crassa OR74A hypothetical protein (NCU03573.1) partial mRNA Length = 4530 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 cttcagctccagtttccaggt 231 ||||||||||||||||||||| Sbjct: 2325 cttcagctccagtttccaggt 2305
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 675 acaaagaaagcagcaacatct 695 ||||||||||||||||||||| Sbjct: 65400 acaaagaaagcagcaacatct 65420
>emb|BX284746.1|NCB23I4 Neurospora crassa DNA linkage group II BAC contig B23I4 Length = 71047 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 cttcagctccagtttccaggt 231 ||||||||||||||||||||| Sbjct: 42013 cttcagctccagtttccaggt 41993
>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence Length = 180270 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 tactcttcagctccagtttcc 227 ||||||||||||||||||||| Sbjct: 127837 tactcttcagctccagtttcc 127857
>gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, complete sequence Length = 174138 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ataacaaaagacaagctagat 70 ||||||||||||||||||||| Sbjct: 68843 ataacaaaagacaagctagat 68823
>gb|AC034207.6| Homo sapiens chromosome 5 clone CTC-329H14, complete sequence Length = 163942 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ataacaaaagacaagctagat 70 ||||||||||||||||||||| Sbjct: 33178 ataacaaaagacaagctagat 33198
>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete sequence Length = 146960 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 675 acaaagaaagcagcaacatct 695 ||||||||||||||||||||| Sbjct: 126297 acaaagaaagcagcaacatct 126317
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tggatggaaatgaagatctaa 471 ||||||||||||||||||||| Sbjct: 12951584 tggatggaaatgaagatctaa 12951564 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tctaacacctaaagaacaaa 486 |||||||||||||||||||| Sbjct: 21883153 tctaacacctaaagaacaaa 21883134
>gb|AC108439.22| Mus musculus chromosome 8, clone RP23-214F1, complete sequence Length = 205732 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 82 accgacaatcaccacacagaatttagcac 110 ||||||||| ||||||||||||| ||||| Sbjct: 51268 accgacaatgaccacacagaattcagcac 51296
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 cacacattatcctccacaaat 437 ||||||||||||||||||||| Sbjct: 122895 cacacattatcctccacaaat 122915
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tggatggaaatgaagatctaa 471 ||||||||||||||||||||| Sbjct: 12958924 tggatggaaatgaagatctaa 12958904 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tctaacacctaaagaacaaa 486 |||||||||||||||||||| Sbjct: 21894816 tctaacacctaaagaacaaa 21894797
>emb|AL450395.7| Mouse DNA sequence from clone RP23-145O4 on chromosome X, complete sequence Length = 198602 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 cccaaagctaaagtcccagtt 252 ||||||||||||||||||||| Sbjct: 33128 cccaaagctaaagtcccagtt 33108
>emb|AL845157.7| Mouse DNA sequence from clone RP23-343I2 on chromosome 2, complete sequence Length = 193797 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 agggctcatcaaagatgactc 171 ||||||||||||||||||||| Sbjct: 116029 agggctcatcaaagatgactc 116049
>ref|NM_118448.3| Arabidopsis thaliana CRK11 (CYSTEINE-RICH RLK11); kinase AT4G23190 (CRK11) mRNA, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgaaactgaagcaacaccaa 386 |||||||||||||||||||| Sbjct: 192 tgaaactgaagcaacaccaa 173
>ref|XM_513235.1| PREDICTED: Pan troglodytes LOC456665 (LOC456665), mRNA Length = 5880 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 1102 ccacagtctcaaccaccaca 1121
>gb|AC004768.1| Homo sapiens chromosome 5, PAC clone 228g9 (LBNL H142), complete sequence Length = 148400 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 catggatggaaatgaagatc 468 |||||||||||||||||||| Sbjct: 146395 catggatggaaatgaagatc 146414
>gb|BC073445.1| Xenopus laevis MGC80946 protein, mRNA (cDNA clone MGC:80946 IMAGE:5516233), complete cds Length = 4788 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ctctgggaagccttcagctt 310 |||||||||||||||||||| Sbjct: 2646 ctctgggaagccttcagctt 2665
>gb|AY814289.1| Schistosoma japonicum SJCHGC02523 protein mRNA, complete cds Length = 2112 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ctgggaagccttcagctttg 312 |||||||||||||||||||| Sbjct: 1686 ctgggaagccttcagctttg 1667
>gb|AC124375.5| Mus musculus BAC clone RP24-572I2 from chromosome 1, complete sequence Length = 160443 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 accccacagtctcaaccacc 585 |||||||||||||||||||| Sbjct: 118474 accccacagtctcaaccacc 118455
>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence Length = 193890 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 aagctacaaggtggctctga 546 |||||||||||||||||||| Sbjct: 93546 aagctacaaggtggctctga 93527
>gb|AF521670.1| Homo sapiens SWI/SNF chromatin remodeling complex subunit OSA1 (OSA1) mRNA, partial cds Length = 6418 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 652 ccacagtctcaaccaccaca 671
>gb|AC121831.3| Mus musculus BAC clone RP24-66F17 from chromosome 2, complete sequence Length = 190963 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tcagcacccaacagcaggta 208 |||||||||||||||||||| Sbjct: 125573 tcagcacccaacagcaggta 125592
>gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosome 13, complete sequence Length = 186588 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 cctccacaaatggatcactg 446 |||||||||||||||||||| Sbjct: 70865 cctccacaaatggatcactg 70846
>ref|NM_006015.3| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A), transcript variant 1, mRNA Length = 8595 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 1880 ccacagtctcaaccaccaca 1899
>ref|NM_139135.1| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A), transcript variant 2, mRNA Length = 7944 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 1880 ccacagtctcaaccaccaca 1899
>emb|AL512408.12| Human DNA sequence from clone RP5-968P14 on chromosome 1 Contains the 5' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1) and a CpG island, complete sequence Length = 64214 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 9486 ccacagtctcaaccaccaca 9467
>emb|AL355300.9| Human DNA sequence from clone RP11-810B23 on chromosome 10 Contains a novel gene, complete sequence Length = 141456 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 accacatccttcacagcaac 602 |||||||||||||||||||| Sbjct: 81176 accacatccttcacagcaac 81157
>gb|AY188989.1| Bacillus circulans endo-beta-N-acetylglucosaminidase gene, complete cds Length = 6131 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 ttgacgttcaccgcacagaa 622 |||||||||||||||||||| Sbjct: 1113 ttgacgttcaccgcacagaa 1132
>emb|AL844518.5| Zebrafish DNA sequence from clone DKEY-83D9 in linkage group 21 Contains novel genes similar to vertebrate AQP3 (aquaporin 3),human and mouse VPS29 (vacuolar protein sorting 29 (yeast)), to human MGC14560 (x 0004 protein), human and mouse ARPC3 (actin related protein 2/3 complex, subunit 3, 21kDa), human UBE2G1 (ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)), vertebrate ATP2A2 (ATPase, Ca++ transporting, cardiac muscle, slow twitch 2), human BCR (breakpoint cluster region) and three CpG islands, complete sequence Length = 242235 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 cacacattatcctccacaaa 436 |||||||||||||||||||| Sbjct: 166247 cacacattatcctccacaaa 166266
>emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chromosome 4 Contains the (pseudo)gene for a novel protein similar to high-mobility group box 1 (Hmgb1), complete sequence Length = 226259 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tttccaggtcccaaagctaa 242 |||||||||||||||||||| Sbjct: 20943 tttccaggtcccaaagctaa 20962
>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58 Length = 193550 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tgaaactgaagcaacaccaa 386 |||||||||||||||||||| Sbjct: 185774 tgaaactgaagcaacaccaa 185793
>emb|AL022347.1|ATF21P8 Arabidopsis thaliana DNA chromosome 4, BAC clone F21P8 (ESSA project) Length = 85785 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tgaaactgaagcaacaccaa 386 |||||||||||||||||||| Sbjct: 31578 tgaaactgaagcaacaccaa 31597
>emb|BX322649.4| Mouse DNA sequence from clone RP23-206P23 on chromosome 4, complete sequence Length = 50666 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tttccaggtcccaaagctaa 242 |||||||||||||||||||| Sbjct: 28970 tttccaggtcccaaagctaa 28989
>emb|BX572628.6| Zebrafish DNA sequence from clone CH211-223G7 in linkage group 4, complete sequence Length = 165454 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 tccaccccacagtctcaacc 582 |||||||||||||||||||| Sbjct: 36139 tccaccccacagtctcaacc 36158
>dbj|AK222415.1| Ciona intestinalis mRNA for nuclear receptor, complete cds, clone: cicl061i08 Length = 2793 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 caaagctaaagtcccagttt 253 |||||||||||||||||||| Sbjct: 2395 caaagctaaagtcccagttt 2414
>dbj|AB001895.1| Homo sapiens mRNA for B120, complete cds Length = 3811 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 648 ccacagtctcaaccaccaca 667
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tctaacacctaaagaacaaa 486 |||||||||||||||||||| Sbjct: 125168 tctaacacctaaagaacaaa 125187
>gb|AC108121.2| Homo sapiens chromosome 5 clone RP11-553D6, complete sequence Length = 148288 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 catggatggaaatgaagatc 468 |||||||||||||||||||| Sbjct: 21285 catggatggaaatgaagatc 21266
>gb|AF219114.1| Homo sapiens chromatin remodelling factor p250 mRNA, partial cds Length = 6042 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 472 ccacagtctcaaccaccaca 491
>gb|AF268913.1|AF268913 Homo sapiens OSA1 nuclear protein mRNA, complete cds Length = 5120 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 361 ccacagtctcaaccaccaca 380
>dbj|AB210022.1| Homo sapiens mRNA for ARID1A variant protein, partial cds, clone: ha02793 Length = 5177 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 472 ccacagtctcaaccaccaca 491
>gb|AC009503.3| Homo sapiens BAC clone RP11-516K23 from 2, complete sequence Length = 201040 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 catggatggaaatgaagatc 468 |||||||||||||||||||| Sbjct: 2449 catggatggaaatgaagatc 2468
>dbj|AB024075.2| Homo sapiens gene for B120, complete cds Length = 5765 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 779 ccacagtctcaaccaccaca 798
>gb|AC007251.4| Homo sapiens BAC clone RP11-373G23 from 2, complete sequence Length = 180964 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 cttcacagcaacttgacgtt 610 |||||||||||||||||||| Sbjct: 123080 cttcacagcaacttgacgtt 123061
>gb|AF231056.1|AF231056 Homo sapiens BRG1-Associated Factor 250a (BAF250a) mRNA, complete cds Length = 7697 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 1888 ccacagtctcaaccaccaca 1907
>gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y, complete sequence Length = 160302 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 catggatggaaatgaagatc 468 |||||||||||||||||||| Sbjct: 105800 catggatggaaatgaagatc 105781
>ref|XM_215994.3| PREDICTED: Rattus norvegicus anaphase promoting complex subunit 2 (predicted) (Anapc2_predicted), mRNA Length = 3048 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ctaacacctaaagaacaaat 487 |||||||||||||||||||| Sbjct: 2701 ctaacacctaaagaacaaat 2720
>gb|AF265208.1|AF265208 Homo sapiens SWI-SNF complex protein p270 mRNA, partial cds Length = 6251 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 438 ccacagtctcaaccaccaca 457
>emb|AJ011674.1|ATH011674 Arabidopsis thaliana mRNA for receptor-like protein kinase Length = 2196 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgaaactgaagcaacaccaa 386 |||||||||||||||||||| Sbjct: 120 tgaaactgaagcaacaccaa 101
>gb|BC107471.1| Rattus norvegicus anaphase promoting complex subunit 2, mRNA (cDNA clone IMAGE:7446651), partial cds Length = 1797 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ctaacacctaaagaacaaat 487 |||||||||||||||||||| Sbjct: 1735 ctaacacctaaagaacaaat 1754
>dbj|AK115517.1| Ciona intestinalis cDNA, clone:cieg057j21, full insert sequence Length = 2928 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 caaagctaaagtcccagttt 253 |||||||||||||||||||| Sbjct: 2433 caaagctaaagtcccagttt 2452
>dbj|AK112182.1| Ciona intestinalis cDNA, clone:cilv007n15, full insert sequence Length = 1735 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 acatccttcacagcaacttg 605 |||||||||||||||||||| Sbjct: 802 acatccttcacagcaacttg 783
>emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on chromosome 2, complete sequence Length = 209560 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tcagcacccaacagcaggta 208 |||||||||||||||||||| Sbjct: 206167 tcagcacccaacagcaggta 206148
>dbj|AB051293.1| Homo sapiens mRNA for SWI related protein, complete cds Length = 4362 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ccacagtctcaaccaccaca 588 |||||||||||||||||||| Sbjct: 441 ccacagtctcaaccaccaca 460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,747,386 Number of Sequences: 3902068 Number of extensions: 6747386 Number of successful extensions: 125772 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125544 Number of HSP's gapped (non-prelim): 228 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
