ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11l16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197320.1| Oryza sativa (japonica cultivar-group) kinesin-... 502 e-139
2gb|AY109066.1| Zea mays PCO084988 mRNA sequence 301 2e-78
3gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 224 3e-55
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 224 3e-55
6gb|AY112497.1| Zea mays CL422_1 mRNA sequence 98 5e-17
7gb|DQ263750.1| Deinagkistrodon acutus agkihagin mRNA, complete cds 44 0.61
8emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chro... 44 0.61
9emb|Z29712.1|ALTASGEN A.lumbricoides proretrovirus-like element ... 44 0.61
10gb|AE000786.1| Borrelia burgdorferi B31 plasmid lp28-2, complete... 44 0.61
11gb|AC122415.4| Mus musculus BAC clone RP24-156A2 from chromosome... 42 2.4
12gb|AC114918.4| Mus musculus BAC clone RP23-86N20 from 5, complet... 42 2.4
13gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complet... 42 2.4
14emb|BX930166.2| Gallus gallus finished cDNA, clone ChEST1022m23 42 2.4
15emb|CR942347.2| Xenopus tropicalis finished cDNA, clone TGas058j22 42 2.4
16emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chr... 42 2.4
17gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 9.6
18gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete... 40 9.6
19gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosom... 40 9.6
20gb|AC121912.3| Mus musculus BAC clone RP24-183P18 from chromosom... 40 9.6
21gb|AC004161.1| Homo sapiens BAC clone CTA-208K23 from 7, complet... 40 9.6
22emb|AL390962.11| Human DNA sequence from clone RP11-84G24 on chr... 40 9.6
23emb|AL355517.12| Human DNA sequence from clone RP11-254A5 on chr... 40 9.6
24gb|AC182731.2| Pan troglodytes BAC clone CH251-677O10 from chrom... 40 9.6
25gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Can... 40 9.6
26gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Can... 40 9.6
27emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in l... 40 9.6
28gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A... 40 9.6
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
30gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, comple... 40 9.6
31gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell ... 40 9.6
32gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K... 40 9.6
33dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
34gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-2... 40 9.6
35emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome;... 40 9.6
36gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 9.6
37gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 9.6
38emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chro... 40 9.6
39gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p... 40 9.6
40gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map ... 40 9.6
41emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on ch... 40 9.6 
>ref|NM_197320.1| Oryza sativa (japonica cultivar-group) kinesin-like protein
            (OSJNBa0026L12.18), mRNA
          Length = 2580

 Score =  502 bits (253), Expect = e-139
 Identities = 397/445 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  gtgaaggtaattatcctgtctacgattcgtgtgcggcacagagggcattccgaacaggca 313
            ||||||||||||||||||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 2576 gtgaaggtaattatcctgtctgcgattcttgtacggcatagagggcattctgaacaggca 2517

                                                                        
Query: 314  agtgcgcaaggcttgcacaagcaaaaatgccgacaaggaagcaaaactgcagcagttgcg 373
            || | ||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 2516 agcgagcaaggcttgcacaagcaaaaatgccgacaaggaagcaaaactgcagcagtggca 2457

                                                                        
Query: 374  gattcaaaacatactttgcagacatgggaattgacatctttatcactcaggggatcggtt 433
            ||||||||||||||||||||||||||||||||  ||||||| |||| || || ||| |||
Sbjct: 2456 gattcaaaacatactttgcagacatgggaatttccatctttgtcacccaaggaatcagtt 2397

                                                                        
Query: 434  tccttctccttcatctcctgaattttagccttgagacgaacaagaagaggttcaaattct 493
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2396 tccttctccttcatctcttgaattttagccttgagacgaacaagaagaggttcaaattct 2337

                                                                        
Query: 494  ggacttctacattcttctgcggtcaatgacttcaaagtatcatctggcacttgtttctca 553
            ||| ||||  |||| ||||| |||||||||||||  |||| |||||  | ||||||||||
Sbjct: 2336 ggatttctgtattcctctgcagtcaatgacttcacggtattatctgaaagttgtttctca 2277

                                                                        
Query: 554  actagagctacatttgtatcacctttgttttcctttatatcattagttatgtcagttaga 613
            |||| |||||||||| | ||| |||||||||||||| || | ||||| ||||||| ||||
Sbjct: 2276 actacagctacatttttgtcagctttgttttcctttgtaccgttagtaatgtcagctaga 2217

                                                                        
Query: 614  ttgacagaccggtcatcaacatttaaatcagatatgctgaaagcccctctcttcaactta 673
            || | ||| || ||||||||||| || ||||||||||  |||||||||||||||| ||||
Sbjct: 2216 ttaatagatcgatcatcaacattcaagtcagatatgcctaaagcccctctcttcagctta 2157

                                     
Query: 674  gcaacaagaacccacatgcctgcta 698
            |||||||| |||||||| |||||||
Sbjct: 2156 gcaacaagtacccacattcctgcta 2132
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>gb|AY109066.1| Zea mays PCO084988 mRNA sequence
          Length = 785

 Score =  301 bits (152), Expect = 2e-78
 Identities = 347/412 (84%)
 Strand = Plus / Minus

                                                                       
Query: 252 acgtgaaggtaattatcctgtctacgattcgtgtgcggcacagagggcattccgaacagg 311
           |||||||||| |||||||||||| |||||| |||||||||||||||||| ||||| ||||
Sbjct: 423 acgtgaaggtgattatcctgtctgcgattcttgtgcggcacagagggcactccgagcagg 364

                                                                       
Query: 312 caagtgcgcaaggcttgcacaagcaaaaatgccgacaaggaagcaaaactgcagcagttg 371
           |||| | |||||||||||||||||| |||||||| ||||||||||| |||||||| | ||
Sbjct: 363 caagcgagcaaggcttgcacaagcagaaatgccggcaaggaagcaatactgcagcggctg 304

                                                                       
Query: 372 cggattcaaaacatactttgcagacatgggaattgacatctttatcactcaggggatcgg 431
           | ||||| ||||| |||||||||||||| || ||  ||||||||||  ||||||||||  
Sbjct: 303 cagattcgaaacaaactttgcagacatgtgagttcccatctttatcggtcaggggatcaa 244

                                                                       
Query: 432 tttccttctccttcatctcctgaattttagccttgagacgaacaagaagaggttcaaatt 491
           | ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 243 tgtccttttccttcatctcctgaattttagccttcagacgaacaagaagtggttcaaact 184

                                                                       
Query: 492 ctggacttctacattcttctgcggtcaatgacttcaaagtatcatctggcacttgtttct 551
           | |||||| ||  ||||||||   ||| |||||||| || ||| ||||   |||| ||||
Sbjct: 183 ccggacttgtatgttcttctgaactcagtgacttcacagaatcttctgatgcttgcttct 124

                                                                       
Query: 552 caactagagctacatttgtatcacctttgttttcctttatatcattagttatgtcagtta 611
           |||||||||| | |||  |  |||||||||| |||||| |    |||||||| |||| ||
Sbjct: 123 caactagagcaaaattctttccacctttgttctcctttgtgctgttagttatatcagcta 64

                                                               
Query: 612 gattgacagaccggtcatcaacatttaaatcagatatgctgaaagcccctct 663
           | || ||||  ||||| |||||||| |||||||||||||  |||||||||||
Sbjct: 63  ggttaacagttcggtcgtcaacattcaaatcagatatgcctaaagcccctct 12



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/69 (86%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 120 gaatggcantacaacatagaaggaacataaaagtaaccttctttgctacagaaaaa-agg 178
           |||||||  ||||||| ||||||||||||||||  |||||||||||||  |||||| || 
Sbjct: 552 gaatggcgatacaacacagaaggaacataaaaggcaccttctttgctaaggaaaaagaga 493

                    
Query: 179 aacatatac 187
           |||||||||
Sbjct: 492 aacatatac 484
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
              sequence
          Length = 152172

 Score =  224 bits (113), Expect = 3e-55
 Identities = 206/237 (86%)
 Strand = Plus / Minus

                                                                          
Query: 462    ccttgagacgaacaagaagaggttcaaattctggacttctacattcttctgcggtcaatg 521
              ||||||||||||||||||||||||||||||||||| ||||  |||| ||||| |||||||
Sbjct: 137745 ccttgagacgaacaagaagaggttcaaattctggatttctgtattcctctgcagtcaatg 137686

                                                                          
Query: 522    acttcaaagtatcatctggcacttgtttctcaactagagctacatttgtatcacctttgt 581
              ||||||  |||| |||||  | |||||||||||||| |||||||||| | ||| ||||||
Sbjct: 137685 acttcacggtattatctgaaagttgtttctcaactacagctacatttttgtcagctttgt 137626

                                                                          
Query: 582    tttcctttatatcattagttatgtcagttagattgacagaccggtcatcaacatttaaat 641
              |||||||| || | ||||| ||||||| |||||| | ||| || ||||||||||| || |
Sbjct: 137625 tttcctttgtaccgttagtaatgtcagctagattaatagatcgatcatcaacattcaagt 137566

                                                                       
Query: 642    cagatatgctgaaagcccctctcttcaacttagcaacaagaacccacatgcctgcta 698
              |||||||||  |||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 137565 cagatatgcctaaagcccctctcttcagcttagcaacaagtacccacattcctgcta 137509



 Score =  182 bits (92), Expect = 1e-42
 Identities = 122/132 (92%)
 Strand = Plus / Minus

                                                                          
Query: 333    agcaaaaatgccgacaaggaagcaaaactgcagcagttgcggattcaaaacatactttgc 392
              ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 138000 agcaaaaatgccgacaaggaagcaaaactgcagcagtggcagattcaaaacatactttgc 137941

                                                                          
Query: 393    agacatgggaattgacatctttatcactcaggggatcggtttccttctccttcatctcct 452
              |||||||||||||  ||||||| |||| || || ||| |||||||||||||||||||| |
Sbjct: 137940 agacatgggaatttccatctttgtcacccaaggaatcagtttccttctccttcatctctt 137881

                          
Query: 453    gaattttagcct 464
              ||||||||||||
Sbjct: 137880 gaattttagcct 137869



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                          
Query: 254    gtgaaggtaattatcctgtctacgattcgtgtgcggcacagagggcattccgaacaggca 313
              ||||||||||||||||||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 138327 gtgaaggtaattatcctgtctgcgattcttgtacggcatagagggcattctgaacaggca 138268

                                 
Query: 314    agtgcgcaaggcttgcaca 332
              || | ||||||||||||||
Sbjct: 138267 agcgagcaaggcttgcaca 138249



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 79/95 (83%), Gaps = 2/95 (2%)
 Strand = Plus / Minus

                                                                          
Query: 132    aacatagaaggaacataaaa-gtaaccttctttgctacagaaaaaaggaa-catatacgg 189
              |||| ||||||||||||||| |  |||||||||||||  | ||||| ||| |||||||  
Sbjct: 138546 aacacagaaggaacataaaaaggcaccttctttgctaggggaaaaaagaatcatatacca 138487

                                                 
Query: 190    ttggtgattttacagggagagattgggtgcgtcaa 224
               || |||||||||| | ||||||||||||| ||||
Sbjct: 138486 ctgatgattttacaagaagagattgggtgcttcaa 138452
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  224 bits (113), Expect = 3e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                            
Query: 462      ccttgagacgaacaagaagaggttcaaattctggacttctacattcttctgcggtcaatg 521
                ||||||||||||||||||||||||||||||||||| ||||  |||| ||||| |||||||
Sbjct: 19238636 ccttgagacgaacaagaagaggttcaaattctggatttctgtattcctctgcagtcaatg 19238695

                                                                            
Query: 522      acttcaaagtatcatctggcacttgtttctcaactagagctacatttgtatcacctttgt 581
                ||||||  |||| |||||  | |||||||||||||| |||||||||| | ||| ||||||
Sbjct: 19238696 acttcacggtattatctgaaagttgtttctcaactacagctacatttttgtcagctttgt 19238755

                                                                            
Query: 582      tttcctttatatcattagttatgtcagttagattgacagaccggtcatcaacatttaaat 641
                |||||||| || | ||||| ||||||| |||||| | ||| || ||||||||||| || |
Sbjct: 19238756 tttcctttgtaccgttagtaatgtcagctagattaatagatcgatcatcaacattcaagt 19238815

                                                                         
Query: 642      cagatatgctgaaagcccctctcttcaacttagcaacaagaacccacatgcctgcta 698
                |||||||||  |||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 19238816 cagatatgcctaaagcccctctcttcagcttagcaacaagtacccacattcctgcta 19238872



 Score =  182 bits (92), Expect = 1e-42
 Identities = 122/132 (92%)
 Strand = Plus / Plus

                                                                            
Query: 333      agcaaaaatgccgacaaggaagcaaaactgcagcagttgcggattcaaaacatactttgc 392
                ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 19238381 agcaaaaatgccgacaaggaagcaaaactgcagcagtggcagattcaaaacatactttgc 19238440

                                                                            
Query: 393      agacatgggaattgacatctttatcactcaggggatcggtttccttctccttcatctcct 452
                |||||||||||||  ||||||| |||| || || ||| |||||||||||||||||||| |
Sbjct: 19238441 agacatgggaatttccatctttgtcacccaaggaatcagtttccttctccttcatctctt 19238500

                            
Query: 453      gaattttagcct 464
                ||||||||||||
Sbjct: 19238501 gaattttagcct 19238512



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                            
Query: 254      gtgaaggtaattatcctgtctacgattcgtgtgcggcacagagggcattccgaacaggca 313
                ||||||||||||||||||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 19238054 gtgaaggtaattatcctgtctgcgattcttgtacggcatagagggcattctgaacaggca 19238113

                                   
Query: 314      agtgcgcaaggcttgcaca 332
                || | ||||||||||||||
Sbjct: 19238114 agcgagcaaggcttgcaca 19238132



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 79/95 (83%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                            
Query: 132      aacatagaaggaacataaaa-gtaaccttctttgctacagaaaaaaggaa-catatacgg 189
                |||| ||||||||||||||| |  |||||||||||||  | ||||| ||| |||||||  
Sbjct: 19237835 aacacagaaggaacataaaaaggcaccttctttgctaggggaaaaaagaatcatatacca 19237894

                                                   
Query: 190      ttggtgattttacagggagagattgggtgcgtcaa 224
                 || |||||||||| | ||||||||||||| ||||
Sbjct: 19237895 ctgatgattttacaagaagagattgggtgcttcaa 19237929
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  224 bits (113), Expect = 3e-55
 Identities = 206/237 (86%)
 Strand = Plus / Plus

                                                                            
Query: 462      ccttgagacgaacaagaagaggttcaaattctggacttctacattcttctgcggtcaatg 521
                ||||||||||||||||||||||||||||||||||| ||||  |||| ||||| |||||||
Sbjct: 19249912 ccttgagacgaacaagaagaggttcaaattctggatttctgtattcctctgcagtcaatg 19249971

                                                                            
Query: 522      acttcaaagtatcatctggcacttgtttctcaactagagctacatttgtatcacctttgt 581
                ||||||  |||| |||||  | |||||||||||||| |||||||||| | ||| ||||||
Sbjct: 19249972 acttcacggtattatctgaaagttgtttctcaactacagctacatttttgtcagctttgt 19250031

                                                                            
Query: 582      tttcctttatatcattagttatgtcagttagattgacagaccggtcatcaacatttaaat 641
                |||||||| || | ||||| ||||||| |||||| | ||| || ||||||||||| || |
Sbjct: 19250032 tttcctttgtaccgttagtaatgtcagctagattaatagatcgatcatcaacattcaagt 19250091

                                                                         
Query: 642      cagatatgctgaaagcccctctcttcaacttagcaacaagaacccacatgcctgcta 698
                |||||||||  |||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct: 19250092 cagatatgcctaaagcccctctcttcagcttagcaacaagtacccacattcctgcta 19250148



 Score =  182 bits (92), Expect = 1e-42
 Identities = 122/132 (92%)
 Strand = Plus / Plus

                                                                            
Query: 333      agcaaaaatgccgacaaggaagcaaaactgcagcagttgcggattcaaaacatactttgc 392
                ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 19249657 agcaaaaatgccgacaaggaagcaaaactgcagcagtggcagattcaaaacatactttgc 19249716

                                                                            
Query: 393      agacatgggaattgacatctttatcactcaggggatcggtttccttctccttcatctcct 452
                |||||||||||||  ||||||| |||| || || ||| |||||||||||||||||||| |
Sbjct: 19249717 agacatgggaatttccatctttgtcacccaaggaatcagtttccttctccttcatctctt 19249776

                            
Query: 453      gaattttagcct 464
                ||||||||||||
Sbjct: 19249777 gaattttagcct 19249788



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                            
Query: 254      gtgaaggtaattatcctgtctacgattcgtgtgcggcacagagggcattccgaacaggca 313
                ||||||||||||||||||||| |||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 19249330 gtgaaggtaattatcctgtctgcgattcttgtacggcatagagggcattctgaacaggca 19249389

                                   
Query: 314      agtgcgcaaggcttgcaca 332
                || | ||||||||||||||
Sbjct: 19249390 agcgagcaaggcttgcaca 19249408



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 79/95 (83%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                            
Query: 132      aacatagaaggaacataaaa-gtaaccttctttgctacagaaaaaaggaa-catatacgg 189
                |||| ||||||||||||||| |  |||||||||||||  | ||||| ||| |||||||  
Sbjct: 19249111 aacacagaaggaacataaaaaggcaccttctttgctaggggaaaaaagaatcatatacca 19249170

                                                   
Query: 190      ttggtgattttacagggagagattgggtgcgtcaa 224
                 || |||||||||| | ||||||||||||| ||||
Sbjct: 19249171 ctgatgattttacaagaagagattgggtgcttcaa 19249205
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>gb|AY112497.1| Zea mays CL422_1 mRNA sequence
          Length = 801

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcatcaacatttaaatcagatatgctgaaagcccctctcttcaacttagcaacaagaacc 685
           ||||||||||| ||||||||||||   ||||||||||| |||||||||||||||||||||
Sbjct: 641 tcatcaacattcaaatcagatatgtctaaagcccctcttttcaacttagcaacaagaacc 582

                        
Query: 686 cacatgcctgcta 698
           ||||||| |||||
Sbjct: 581 cacatgcttgcta 569
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>gb|DQ263750.1| Deinagkistrodon acutus agkihagin mRNA, complete cds
          Length = 2551

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 518  aatgacttcaaagtatcatctg 539
            ||||||||||||||||||||||
Sbjct: 1101 aatgacttcaaagtatcatctg 1080
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>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
             sequence
          Length = 122069

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 486   caaattctggacttctacattc 507
             ||||||||||||||||||||||
Sbjct: 80969 caaattctggacttctacattc 80990
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>emb|Z29712.1|ALTASGEN A.lumbricoides proretrovirus-like element Tas genes for gag protein,
            reverse transcriptase and env-like protein
          Length = 7627

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 541  cacttgtttctcaactagagct 562
            ||||||||||||||||||||||
Sbjct: 4822 cacttgtttctcaactagagct 4843
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>gb|AE000786.1| Borrelia burgdorferi B31 plasmid lp28-2, complete sequence
          Length = 29766

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 347   caaggaagcaaaactgcagcagttgc 372
             |||||||||||||||||| |||||||
Sbjct: 19988 caaggaagcaaaactgcatcagttgc 19963
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>gb|AC122415.4| Mus musculus BAC clone RP24-156A2 from chromosome 16, complete sequence
          Length = 173829

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 578   ttgttttcctttatatcatta 598
             |||||||||||||||||||||
Sbjct: 69542 ttgttttcctttatatcatta 69522
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>gb|AC114918.4| Mus musculus BAC clone RP23-86N20 from 5, complete sequence
          Length = 165767

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   tttccttctccttcatctcct 452
             |||||||||||||||||||||
Sbjct: 77484 tttccttctccttcatctcct 77504
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>gb|AC121998.2| Mus musculus BAC clone RP24-318H5 from 2, complete sequence
          Length = 135317

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 577    tttgttttcctttatatcattagtt 601
              |||||||| ||||||||||||||||
Sbjct: 113800 tttgtttttctttatatcattagtt 113776
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>emb|BX930166.2| Gallus gallus finished cDNA, clone ChEST1022m23
          Length = 954

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 352 aagcaaaactgcagcagttgc 372
           |||||||||||||||||||||
Sbjct: 163 aagcaaaactgcagcagttgc 143
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>emb|CR942347.2| Xenopus tropicalis finished cDNA, clone TGas058j22
          Length = 4479

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                             
Query: 154  aaccttcttt-gctacagaaaaaaggaacatat 185
            |||||||||| |||||||||| |||||||||||
Sbjct: 3103 aaccttctttagctacagaaataaggaacatat 3071
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>emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chromosome 2, complete
              sequence
          Length = 143594

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 577    tttgttttcctttatatcattagtt 601
              |||||||| ||||||||||||||||
Sbjct: 131425 tttgtttttctttatatcattagtt 131449
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    atgggaattgacatctttat 416
              ||||||||||||||||||||
Sbjct: 801625 atgggaattgacatctttat 801606
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>gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete sequence
          Length = 75609

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  gtatcacctttgttttcctt 588
            ||||||||||||||||||||
Sbjct: 8755 gtatcacctttgttttcctt 8774
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>gb|AC141563.3| Mus musculus BAC clone RP23-410M22 from chromosome 6, complete sequence
          Length = 186983

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 579    tgttttcctttatatcatta 598
              ||||||||||||||||||||
Sbjct: 178221 tgttttcctttatatcatta 178202
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>gb|AC121912.3| Mus musculus BAC clone RP24-183P18 from chromosome 14, complete sequence
          Length = 198542

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    acaagaagaggttcaaattc 492
              ||||||||||||||||||||
Sbjct: 178174 acaagaagaggttcaaattc 178155
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>gb|AC004161.1| Homo sapiens BAC clone CTA-208K23 from 7, complete sequence
          Length = 112237

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   caaaagtttccttaggctaa 241
             ||||||||||||||||||||
Sbjct: 98013 caaaagtttccttaggctaa 97994
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>emb|AL390962.11| Human DNA sequence from clone RP11-84G24 on chromosome 9 Contains the
            5' end of a novel gene, complete sequence
          Length = 169670

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  tccttcatctcctgaatttt 459
            ||||||||||||||||||||
Sbjct: 9909 tccttcatctcctgaatttt 9928
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>emb|AL355517.12| Human DNA sequence from clone RP11-254A5 on chromosome 10, complete
             sequence
          Length = 171348

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   gggaattgacatctttatca 418
             ||||||||||||||||||||
Sbjct: 56569 gggaattgacatctttatca 56550
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>gb|AC182731.2| Pan troglodytes BAC clone CH251-677O10 from chromosome 7, complete
             sequence
          Length = 217081

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    atacacatttgttgagaagt 62
             ||||||||||||||||||||
Sbjct: 36612 atacacatttgttgagaagt 36631
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>gb|AC016920.14| Homo sapiens 3 BAC RP11-203L15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142127

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    tatatcattagttatgtcag 608
              ||||||||||||||||||||
Sbjct: 110140 tatatcattagttatgtcag 110121
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>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 170004

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   acagaaaaaaggaacatata 186
             ||||||||||||||||||||
Sbjct: 66520 acagaaaaaaggaacatata 66539
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>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete
              sequence
          Length = 213917

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     aatacaacaaggagccaaggtaaa 99
              |||||||||||||||||| |||||
Sbjct: 118435 aatacaacaaggagccaaagtaaa 118458
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>gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A17 map 3p, complete sequence
          Length = 152580

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     atacacatttgttgagaagt 62
              ||||||||||||||||||||
Sbjct: 134438 atacacatttgttgagaagt 134457
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 433      ttccttctccttcatctcctgaat 456
                ||||| ||||||||||||||||||
Sbjct: 25350727 ttcctcctccttcatctcctgaat 25350750
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>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence
          Length = 194508

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    ttatatcattagttatgtca 607
              ||||||||||||||||||||
Sbjct: 191641 ttatatcattagttatgtca 191622
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>gb|AC021058.16|AC021058 Homo sapiens 12 BAC RP11-373H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168134

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   acagaaaaaaggaacatata 186
             ||||||||||||||||||||
Sbjct: 17778 acagaaaaaaggaacatata 17759
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>gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K24 map 3p, complete sequence
          Length = 142190

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    atacacatttgttgagaagt 62
             ||||||||||||||||||||
Sbjct: 94505 atacacatttgttgagaagt 94486
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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1056G08
          Length = 168173

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 433   ttccttctccttcatctcctgaat 456
             ||||| ||||||||||||||||||
Sbjct: 43817 ttcctcctccttcatctcctgaat 43840
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>gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-218N2, complete sequence
          Length = 201728

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     atctatacacatttgttgagaagt 62
              |||||||||||||||||| |||||
Sbjct: 125141 atctatacacatttgttgggaagt 125164
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>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7
          Length = 346683

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    ttccttaggctaacaagtgatcta 252
              |||||||| |||||||||||||||
Sbjct: 104179 ttccttagtctaacaagtgatcta 104202
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    tttccttctccttcatctcc 451
              ||||||||||||||||||||
Sbjct: 439355 tttccttctccttcatctcc 439374
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    atgggaattgacatctttat 416
              ||||||||||||||||||||
Sbjct: 795201 atgggaattgacatctttat 795182
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>emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chromosome 2, complete
              sequence
          Length = 189821

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ttacttctgaggacaatgtt 30
              ||||||||||||||||||||
Sbjct: 111024 ttacttctgaggacaatgtt 111005
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>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence
          Length = 185496

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     atacacatttgttgagaagt 62
              ||||||||||||||||||||
Sbjct: 174591 atacacatttgttgagaagt 174572
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>gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map 3p, complete sequence
          Length = 181736

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     atacacatttgttgagaagt 62
              ||||||||||||||||||||
Sbjct: 150144 atacacatttgttgagaagt 150163
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>emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on chromosome 11, complete
              sequence
          Length = 155262

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     atctatacacatttgttgagaagt 62
              |||||||||||||||||| |||||
Sbjct: 116551 atctatacacatttgttgggaagt 116574


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,912,012
Number of Sequences: 3902068
Number of extensions: 6912012
Number of successful extensions: 145850
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 145522
Number of HSP's gapped (non-prelim): 325
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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