ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11l08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1326 bits (669), Expect = 0.0 Identities = 690/696 (99%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118244 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118302 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118303 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118362 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118363 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagc 118422 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118423 gccgtagcgcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatact 118482 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118483 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118542 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118543 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118602 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118603 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118662 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118663 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118722 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118782 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118842 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118902 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118903 catcttcagcgcaagggcgctcgatcagtgagctat 118938 Score = 1326 bits (669), Expect = 0.0 Identities = 690/696 (99%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 96650 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96592 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96591 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96532 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 96531 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagc 96472 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96471 gccgtagcgcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatact 96412 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96411 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96352 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96351 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96292 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96291 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96232 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96231 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96172 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96171 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96112 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96111 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96052 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96051 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 95992 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 95991 catcttcagcgcaagggcgctcgatcagtgagctat 95956
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118109 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118167 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118168 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118227 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 118228 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 118287 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118288 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 118347 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118348 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118407 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118408 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118467 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118468 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118527 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118528 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118587 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118588 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118647 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118707 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118767 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118768 catcttcagcgcaagggcgctcgatcagtgagctat 118803 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 97047 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96989 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96988 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96929 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 96928 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 96869 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96868 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 96809 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96808 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96749 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96748 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96689 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96688 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96629 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96628 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96569 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96568 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96509 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96449 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 96389 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 96388 catcttcagcgcaagggcgctcgatcagtgagctat 96353
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118109 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118167 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118168 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118227 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 118228 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 118287 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118288 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 118347 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118348 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118407 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118408 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118467 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118468 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118527 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118528 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118587 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118588 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118647 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118707 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118767 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118768 catcttcagcgcaagggcgctcgatcagtgagctat 118803 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 97047 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96989 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96988 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96929 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 96928 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 96869 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96868 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 96809 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96808 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96749 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96748 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96689 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96688 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96629 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96628 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96569 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96568 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96509 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96449 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 96389 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 96388 catcttcagcgcaagggcgctcgatcagtgagctat 96353
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118058 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118116 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118117 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118176 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 118177 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 118236 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118237 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 118296 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118297 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118356 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118357 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118416 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118417 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118476 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118477 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118536 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118537 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118596 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118597 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118656 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118657 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118716 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118717 catcttcagcgcaagggcgctcgatcagtgagctat 118752 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 96992 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96934 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96933 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96874 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 96873 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 96814 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96813 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 96754 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96753 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96694 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96693 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96634 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96633 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96574 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96573 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96514 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96513 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96454 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96453 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96394 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96393 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 96334 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 96333 catcttcagcgcaagggcgctcgatcagtgagctat 96298
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 31509625 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 31509567 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509566 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 31509507 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31509506 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 31509447 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31509446 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 31509387 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509386 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 31509327 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509326 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 31509267 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509266 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 31509207 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509206 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 31509147 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509146 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 31509087 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509086 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 31509027 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509026 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 31508967 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 31508966 catcttcagcgcaagggcgctcgatcagtgagctat 31508931 Score = 1265 bits (638), Expect = 0.0 Identities = 682/696 (97%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 |||| |||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 27319925 ggggacaccccttctctcgaagttacggggctattttgccgagttcctta-aagagagtt 27319983 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27319984 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 27320043 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27320044 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 27320103 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27320104 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 27320163 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27320164 tcagcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttctt 27320223 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320224 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 27320283 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320284 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 27320343 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320344 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgt 27320403 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320404 ggaggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagcc 27320463 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320464 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 27320523 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320524 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 27320583 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 27320584 catcttcagcgcaagggcgctcgatcagtgagctat 27320619 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Plus Query: 443 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512918 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11512977 Query: 503 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512978 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11513037 Query: 563 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513038 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11513097 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513098 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 11513157 Query: 683 gatcagtgagctat 696 |||||||||||||| Sbjct: 11513158 gatcagtgagctat 11513171
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 82971 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 83029 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83030 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 83089 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 83090 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 83149 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 83150 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 83209 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83210 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 83269 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83270 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 83329 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83330 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 83389 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83390 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 83449 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83450 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 83509 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83510 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 83569 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83570 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 83629 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 83630 catcttcagcgcaagggcgctcgatcagtgagctat 83665
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 124088 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 124030 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124029 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 123970 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123969 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 123910 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123909 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 123850 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123849 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 123790 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123789 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 123730 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123729 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 123670 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123669 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 123610 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123609 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 123550 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123549 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 123490 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123489 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 123430 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 123429 catcttcagcgcaagggcgctcgatcagtgagctat 123394 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 15814 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 15756 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15755 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 15696 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 15695 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 15636 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 15635 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 15576 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15575 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 15516 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15515 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 15456 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15455 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 15396 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15395 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 15336 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15335 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 15276 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15275 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 15216 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15215 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 15156 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 15155 catcttcagcgcaagggcgctcgatcagtgagctat 15120
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 142622 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 142564 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142563 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 142504 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 142503 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 142444 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142443 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 142384 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142383 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 142324 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142323 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 142264 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142263 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 142204 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 142144 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 142084 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142083 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 142024 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142023 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 141964 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 141963 catcttcagcgcaagggcgctcgatcagtgagctat 141928
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 43068 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 43126 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43127 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 43186 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 43187 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 43246 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 43247 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 43306 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43307 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 43366 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43367 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 43426 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43427 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 43486 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43487 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 43546 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43547 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 43606 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 43607 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 43666 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43667 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 43726 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 43727 catcttcagcgcaagggcgctcgatcagtgagctat 43762 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 22049 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 21991 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21990 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 21931 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 21930 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 21871 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 21870 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 21811 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21810 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 21751 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21750 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 21691 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21690 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 21631 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21630 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 21571 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21570 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 21511 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21510 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 21451 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21450 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 21391 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 21390 catcttcagcgcaagggcgctcgatcagtgagctat 21355
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 9269974 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 9269916 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269915 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 9269856 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9269855 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 9269796 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9269795 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 9269736 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269735 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 9269676 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269675 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 9269616 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269615 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 9269556 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269555 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 9269496 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269495 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 9269436 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269435 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 9269376 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269375 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 9269316 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 9269315 catcttcagcgcaagggcgctcgatcagtgagctat 9269280 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 9229474 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 9229416 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229415 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 9229356 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9229355 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 9229296 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9229295 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 9229236 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229235 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 9229176 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229175 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 9229116 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229115 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 9229056 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229055 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 9228996 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228995 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 9228936 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228935 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 9228876 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228875 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 9228816 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 9228815 catcttcagcgcaagggcgctcgatcagtgagctat 9228780 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 9166062 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 9166004 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9166003 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 9165944 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9165943 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 9165884 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9165883 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 9165824 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165823 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 9165764 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165763 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 9165704 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165703 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 9165644 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165643 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 9165584 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165583 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 9165524 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165523 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 9165464 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165463 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 9165404 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 9165403 catcttcagcgcaagggcgctcgatcagtgagctat 9165368 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 9057888 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 9057830 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057829 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 9057770 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9057769 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 9057710 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9057709 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 9057650 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057649 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 9057590 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057589 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 9057530 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057529 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 9057470 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057469 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 9057410 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057409 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 9057350 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057349 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 9057290 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057289 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 9057230 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 9057229 catcttcagcgcaagggcgctcgatcagtgagctat 9057194 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Minus Query: 175 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 234 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 235 catacttcagcgctgcagcgcttggtactcggacctcgg 273 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 334 aacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 391 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaataaggg 5792165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 19939959 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 19939901 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939900 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 19939841 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19939840 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 19939781 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19939780 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 19939721 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939720 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 19939661 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939660 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 19939601 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939600 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 19939541 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939540 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 19939481 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939480 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 19939421 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939420 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 19939361 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939360 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 19939301 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 19939300 catcttcagcgcaagggcgctcgatcagtgagctat 19939265 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 10275472 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 10275530 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275531 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 10275590 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10275591 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 10275650 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10275651 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 10275710 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275711 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 10275770 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275771 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 10275830 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275831 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 10275890 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275891 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 10275950 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275951 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 10276010 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276011 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 10276070 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10276071 acgctcccctaccgatgcattttgacatcccacagcttcggcagattgcttagccccgtt 10276130 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 10276131 catcttcagcgcaagggcgctcgatcagtgagctat 10276166 Score = 1302 bits (657), Expect = 0.0 Identities = 687/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 10388826 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 10388768 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388767 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 10388708 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10388707 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 10388648 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10388647 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 10388588 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388587 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 10388528 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388527 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 10388468 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388467 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 10388408 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10388407 tcgactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgc 10388348 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388347 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 10388288 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388287 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 10388228 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388227 acgctctcctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 10388168 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 10388167 catcttcagcgcaagggcgctcgatcagtgagctat 10388132 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 648 gcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833473 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15833511
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 9240307 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 9240365 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240366 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 9240425 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9240426 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 9240485 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9240486 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 9240545 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240546 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 9240605 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240606 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 9240665 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240666 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 9240725 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240726 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 9240785 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240786 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 9240845 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240846 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 9240905 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240906 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 9240965 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 9240966 catcttcagcgcaagggcgctcgatcagtgagctat 9241001 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 89 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 148 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 3579634 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 3579693 Query: 149 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 208 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 3579694 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 3579748 Query: 209 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 268 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3579749 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 3579808 Query: 269 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 328 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 3579809 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 3579867 Query: 329 ccttaaacc 337 ||||||||| Sbjct: 3579868 ccttaaacc 3579876 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 591 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 637 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 3580239 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 3580285 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 437 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaa 488 ||||||||||||||||| | |||| |||| |||||||| |||| |||||||| Sbjct: 22198978 gcctgatcttaggccctaattcactctccatggacgaatcttgtggaggaaa 22199029 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Plus Query: 634 agcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||||| |||||||||||||||||| ||||| |||| |||| Sbjct: 22199093 agctttggcagatcgcttagccccattcattttcaacgca 22199132
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 31600141 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 31600083 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31600082 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 31600023 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31600022 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 31599963 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31599962 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 31599903 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599902 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 31599843 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599842 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 31599783 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599782 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 31599723 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599722 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 31599663 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599662 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 31599603 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599602 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 31599543 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599542 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 31599483 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 31599482 catcttcagcgcaagggcgctcgatcagtgagctat 31599447 Score = 1265 bits (638), Expect = 0.0 Identities = 682/696 (97%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 |||| |||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 27411248 ggggacaccccttctctcgaagttacggggctattttgccgagttcctta-aagagagtt 27411306 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411307 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 27411366 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27411367 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 27411426 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27411427 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 27411486 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27411487 tcagcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttctt 27411546 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411547 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 27411606 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411607 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 27411666 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411667 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgt 27411726 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411727 ggaggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagcc 27411786 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411787 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 27411846 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411847 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 27411906 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 27411907 catcttcagcgcaagggcgctcgatcagtgagctat 27411942 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Plus Query: 443 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509681 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11509740 Query: 503 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509741 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11509800 Query: 563 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509801 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11509860 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509861 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 11509920 Query: 683 gatcagtgagctat 696 |||||||||||||| Sbjct: 11509921 gatcagtgagctat 11509934
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 46084 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 46142 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46143 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 46202 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 46203 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 46262 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 46263 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 46322 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46323 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 46382 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46383 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 46442 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46443 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 46502 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46503 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 46562 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46563 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 46622 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46623 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 46682 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46683 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 46742 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 46743 catcttcagcgcaagggcgctcgatcagtgagctat 46778
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 121908 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 121966 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121967 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 122026 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122027 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 122086 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122087 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 122146 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122147 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 122206 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122207 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 122266 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122267 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 122326 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122327 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 122386 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122387 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 122446 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122447 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 122506 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122507 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 122566 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 122567 catcttcagcgcaagggcgctcgatcagtgagctat 122602 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 100929 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 100871 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100870 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 100811 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 100810 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 100751 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100750 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 100691 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100690 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 100631 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100630 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 100571 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100570 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 100511 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100510 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 100451 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100450 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 100391 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100390 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 100331 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100330 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 100271 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 100270 catcttcagcgcaagggcgctcgatcagtgagctat 100235
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 51520 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 51578 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51579 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 51638 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 51639 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 51698 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 51699 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 51758 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51759 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 51818 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51819 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 51878 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51879 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 51938 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51939 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 51998 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51999 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 52058 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52059 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 52118 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52119 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 52178 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 52179 catcttcagcgcaagggcgctcgatcagtgagctat 52214
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 896 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 838 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 778 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 777 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 718 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 717 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 658 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 598 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 538 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 478 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 418 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 358 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 298 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 238 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 237 catcttcagcgcaagggcgctcgatcagtgagctat 202
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1621 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1563 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1562 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1503 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1502 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 1443 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1442 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 1383 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1382 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 1323 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 1263 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 1203 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 1143 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 1083 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 1023 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 963 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 962 catcttcagcgcaagggcgctcgatcagtgagctat 927
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1621 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1563 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1562 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1503 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1502 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 1443 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1442 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 1383 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1382 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 1323 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 1263 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 1203 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 1143 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 1083 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 1023 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 963 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 962 catcttcagcgcaagggcgctcgatcagtgagctat 927
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 19951235 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 19951177 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951176 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 19951117 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19951116 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 19951057 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19951056 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 19950997 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950996 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 19950937 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950936 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 19950877 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950876 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 19950817 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950816 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 19950757 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950756 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 19950697 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950696 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 19950637 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950636 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 19950577 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 19950576 catcttcagcgcaagggcgctcgatcagtgagctat 19950541 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 10281511 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 10281569 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281570 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 10281629 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10281630 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 10281689 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10281690 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 10281749 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281750 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 10281809 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281810 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 10281869 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281870 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 10281929 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281930 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 10281989 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281990 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 10282049 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282050 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 10282109 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10282110 acgctcccctaccgatgcattttgacatcccacagcttcggcagattgcttagccccgtt 10282169 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 10282170 catcttcagcgcaagggcgctcgatcagtgagctat 10282205 Score = 1302 bits (657), Expect = 0.0 Identities = 687/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 10394865 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 10394807 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394806 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 10394747 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10394746 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 10394687 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10394686 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 10394627 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394626 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 10394567 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394566 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 10394507 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394506 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 10394447 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10394446 tcgactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgc 10394387 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394386 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 10394327 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394326 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 10394267 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394266 acgctctcctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 10394207 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 10394206 catcttcagcgcaagggcgctcgatcagtgagctat 10394171 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 648 gcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841714 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15841752
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 122625 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 122683 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122684 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 122743 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122744 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 122803 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122804 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 122863 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122864 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 122923 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122924 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 122983 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122984 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 123043 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123044 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 123103 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123104 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 123163 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123164 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 123223 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123224 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 123283 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 123284 catcttcagcgcaagggcgctcgatcagtgagctat 123319 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 101606 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 101548 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101547 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 101488 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 101487 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 101428 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101427 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 101368 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101367 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 101308 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101307 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 101248 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101247 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 101188 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101187 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 101128 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101127 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 101068 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 101067 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 101008 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101007 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 100948 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 100947 catcttcagcgcaagggcgctcgatcagtgagctat 100912
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118052 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118110 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118111 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118170 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 118171 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 118230 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118231 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 118290 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118291 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118350 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118351 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118410 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118411 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118470 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118471 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118530 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118531 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118590 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118591 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118650 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118651 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118710 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118711 catcttcagcgcaagggcgctcgatcagtgagctat 118746 Score = 1318 bits (665), Expect = 0.0 Identities = 689/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 96987 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96929 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96928 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96869 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 96868 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 96809 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96808 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 96749 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96748 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96689 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96688 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96629 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96628 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96569 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96568 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96509 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96449 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96389 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 96329 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 96328 catcttcagcgcaagggcgctcgatcagtgagctat 96293
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 117025 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 117083 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117084 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 117143 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 117144 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 117203 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117204 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 117263 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117264 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 117323 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117324 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 117383 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117384 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 117443 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117444 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 117503 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117504 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 117563 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117564 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 117623 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117624 acgctcccctaccgatgcattttgacatcccacagcttcggcagattgcttagccccgtt 117683 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 117684 catcttcagcgcaagggcgctcgatcagtgagctat 117719
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 56797 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 56855 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56856 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 56915 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 56916 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 56975 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 56976 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 57035 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57036 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 57095 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57096 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 57155 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57156 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 57215 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57216 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 57275 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57276 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 57335 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57336 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 57395 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 57396 acgctcccctaccgatgcattttgacatcccacagcttcggcagattgcttagccccgtt 57455 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 57456 catcttcagcgcaagggcgctcgatcagtgagctat 57491
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 700 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 642 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 582 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 581 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 522 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 521 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 462 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 402 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 342 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 282 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 281 tcgactacgcctttcggcctgatcctaggccctgactcaccctccgtggacgaaccttgc 222 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 162 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 102 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 42 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 41 catcttcagcgcaagggcgctcgatcagtgagctat 6
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 765 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 707 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 647 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 646 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 587 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 586 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 527 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 467 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 407 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 406 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacccgttgtcca 347 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 287 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 227 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 167 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 107 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 106 catcttcagcgcaagggcgctcgatcagtgagctat 71
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 709 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 651 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 591 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 590 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 531 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 530 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 471 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 411 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 351 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccg 291 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 231 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 171 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 111 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 51 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 50 catcttcagcgcaagggcgctcgatcagtgagctat 15
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1310 bits (661), Expect = 0.0 Identities = 688/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1244 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1186 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1126 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1125 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 1066 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1065 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 1006 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 946 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 886 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 826 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 766 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 706 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 705 gacattctcgcttccgcttcgtcaacccccgctttcgcggttgcttccctctaaggcgga 646 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 586 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 585 catcttcagcgcaagggcgctcgatcagtgagctat 550
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1302 bits (657), Expect = 0.0 Identities = 688/696 (98%), Gaps = 2/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 118079 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 118137 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118138 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 118197 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 118198 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-c 118256 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118257 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 118316 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118317 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 118376 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118377 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 118436 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118437 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 118496 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118497 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 118556 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118557 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 118616 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118617 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 118676 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118677 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 118736 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 118737 catcttcagcgcaagggcgctcgatcagtgagctat 118772 Score = 1302 bits (657), Expect = 0.0 Identities = 688/696 (98%), Gaps = 2/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 97039 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 96981 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96980 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 96921 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 96920 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-c 96862 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96861 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 96802 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96801 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 96742 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96741 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 96682 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96681 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 96622 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96621 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 96562 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96561 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 96502 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96501 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 96442 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96441 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 96382 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 96381 catcttcagcgcaagggcgctcgatcagtgagctat 96346
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1302 bits (657), Expect = 0.0 Identities = 687/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 95218 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 95160 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95159 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 95100 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95099 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 95040 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95039 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 94980 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94979 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 94920 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94919 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 94860 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94859 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 94800 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 94799 tcgactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgc 94740 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94739 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 94680 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94679 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 94620 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94619 acgctctcctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 94560 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 94559 catcttcagcgcaagggcgctcgatcagtgagctat 94524
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1302 bits (657), Expect = 0.0 Identities = 687/696 (98%), Gaps = 1/696 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 29282 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 29224 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29223 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 29164 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 29163 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 29104 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 29103 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 29044 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29043 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 28984 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28983 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 28924 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28923 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 28864 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 28863 tcgactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgc 28804 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28803 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 28744 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28743 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 28684 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28683 acgctctcctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 28624 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 28623 catcttcagcgcaagggcgctcgatcagtgagctat 28588
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1300 bits (656), Expect = 0.0 Identities = 672/676 (99%), Gaps = 1/676 (0%) Strand = Plus / Minus Query: 21 agttacggggctattttgccgagttccttagnagagagttgtctcgcgcccctaggtatt 80 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1472 agttacggggctattttgccgagttccttag-agagagttgtctcgcgcccctaggtatt 1414 Query: 81 ctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg 140 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1413 ctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcg 1354 Query: 141 agcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgag 200 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1353 agcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgag 1294 Query: 201 cctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggt 260 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 cctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggt 1234 Query: 261 actcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtca 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 actcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtca 1174 Query: 321 ccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 ccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt 1114 Query: 381 accaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcct 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 accaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcct 1054 Query: 441 gatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttc 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 gatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttc 994 Query: 501 ggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttc 934 Query: 561 gtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcat 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 gtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcat 874 Query: 621 tttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 814 Query: 681 tcgatcagtgagctat 696 |||||||||||||||| Sbjct: 813 tcgatcagtgagctat 798
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 1265 bits (638), Expect = 0.0 Identities = 682/696 (97%), Gaps = 1/696 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 |||| |||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 20132 ggggacaccccttctctcgaagttacggggctattttgccgagttcctta-aagagagtt 20190 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20191 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 20250 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20251 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 20310 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20311 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 20370 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 20371 tcagcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttctt 20430 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20431 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 20490 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20491 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 20550 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20551 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgt 20610 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20611 ggaggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagcc 20670 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20671 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 20730 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20731 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 20790 Query: 661 catcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||| Sbjct: 20791 catcttcagcgcaagggcgctcgatcagtgagctat 20826
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1239 bits (625), Expect = 0.0 Identities = 668/680 (98%), Gaps = 2/680 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 121851 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 121909 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121910 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 121969 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 121970 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gc 122028 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122029 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 122088 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122089 ttcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 122148 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122149 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 122208 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122209 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 122268 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122269 tcgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 122328 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122329 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 122388 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122389 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 122448 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122449 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 122508 Query: 661 catcttcagcgcaagggcgc 680 |||||||||||||||||||| Sbjct: 122509 catcttcagcgcaagggcgc 122528 Score = 1239 bits (625), Expect = 0.0 Identities = 668/680 (98%), Gaps = 2/680 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 100886 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 100828 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100827 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 100768 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 100767 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gc 100709 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100708 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 100649 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100648 ttcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 100589 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100588 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 100529 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100528 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 100469 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100468 tcgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 100409 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100408 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 100349 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100348 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 100289 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100288 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 100229 Query: 661 catcttcagcgcaagggcgc 680 |||||||||||||||||||| Sbjct: 100228 catcttcagcgcaagggcgc 100209
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1239 bits (625), Expect = 0.0 Identities = 668/680 (98%), Gaps = 2/680 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 7239 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 7181 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7180 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 7121 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 7120 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gc 7062 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 7061 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 7002 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7001 ttcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 6942 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6941 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 6882 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6881 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 6822 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6821 tcgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 6762 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6761 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 6702 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6701 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 6642 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6641 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 6582 Query: 661 catcttcagcgcaagggcgc 680 |||||||||||||||||||| Sbjct: 6581 catcttcagcgcaagggcgc 6562
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1239 bits (625), Expect = 0.0 Identities = 668/680 (98%), Gaps = 2/680 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1827 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1769 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1768 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1709 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 1708 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gc 1650 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1649 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 1590 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1589 ttcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 1530 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1529 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 1470 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1469 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 1410 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1409 tcgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 1350 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1349 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 1290 Query: 541 gacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcgga 600 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1289 gacattctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcgga 1230 Query: 601 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1229 acgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgtt 1170 Query: 661 catcttcagcgcaagggcgc 680 |||||||||||||||||||| Sbjct: 1169 catcttcagcgcaagggcgc 1150
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 1007 bits (508), Expect = 0.0 Identities = 547/559 (97%), Gaps = 1/559 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 5633991 gggggcaacccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 5634049 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634050 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 5634109 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5634110 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 5634169 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 5634170 accgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatact 5634229 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634230 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 5634289 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5634290 accctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacct 5634349 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634350 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 5634409 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634410 tcgactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgc 5634469 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634470 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 5634529 Query: 541 gacattctcgcttccgctt 559 ||||||||||||||||||| Sbjct: 5634530 gacattctcgcttccgctt 5634548 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 227 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 286 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146 Query: 287 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 329 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13417189
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 1007 bits (508), Expect = 0.0 Identities = 547/559 (97%), Gaps = 1/559 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 5633980 gggggcaacccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 5634038 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634039 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 5634098 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5634099 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 5634158 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 5634159 accgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatact 5634218 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634219 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 5634278 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5634279 accctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacct 5634338 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634339 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 5634398 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634399 tcgactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgc 5634458 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634459 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 5634518 Query: 541 gacattctcgcttccgctt 559 ||||||||||||||||||| Sbjct: 5634519 gacattctcgcttccgctt 5634537 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 227 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 286 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420 Query: 287 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 329 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13371463
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 1007 bits (508), Expect = 0.0 Identities = 547/559 (97%), Gaps = 1/559 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 18894 gggggcaacccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 18836 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18835 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 18776 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 18775 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 18716 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 18715 accgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatact 18656 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18655 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 18596 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 18595 accctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacct 18536 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18535 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 18476 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18475 tcgactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgc 18416 Query: 481 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18415 ggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagcc 18356 Query: 541 gacattctcgcttccgctt 559 ||||||||||||||||||| Sbjct: 18355 gacattctcgcttccgctt 18337
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 892 bits (450), Expect = 0.0 Identities = 474/481 (98%), Gaps = 1/481 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 480 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 422 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 362 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 361 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 302 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 301 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 242 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctt 182 Query: 301 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 accctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacct 122 Query: 361 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 62 Query: 421 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgc 2 Query: 481 g 481 | Sbjct: 1 g 1
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 884 bits (446), Expect = 0.0 Identities = 449/450 (99%) Strand = Plus / Plus Query: 247 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60 Query: 307 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 120 Query: 367 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 180 Query: 427 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 240 Query: 487 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 300 Query: 547 ctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctc 606 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 ctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgctc 360 Query: 607 ccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatctt 666 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatctt 420 Query: 667 cagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||| Sbjct: 421 cagcgcaagggcgctcgatcagtgagctat 450
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 868 bits (438), Expect = 0.0 Identities = 441/442 (99%) Strand = Plus / Minus Query: 255 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 314 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114 Query: 315 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1054 Query: 375 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 994 Query: 435 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 934 Query: 495 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 874 Query: 555 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 814 Query: 615 atgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 674 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 atgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 754 Query: 675 gggcgctcgatcagtgagctat 696 |||||||||||||||||||||| Sbjct: 753 gggcgctcgatcagtgagctat 732
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 769 bits (388), Expect = 0.0 Identities = 391/392 (99%) Strand = Plus / Plus Query: 305 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60 Query: 365 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 120 Query: 425 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 180 Query: 485 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 240 Query: 545 ttctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgc 604 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 ttctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgc 300 Query: 605 tcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatc 664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatc 360 Query: 665 ttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||| Sbjct: 361 ttcagcgcaagggcgctcgatcagtgagctat 392
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 729 bits (368), Expect = 0.0 Identities = 437/460 (95%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 126344 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 126403 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 126404 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 126463 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126464 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 126523 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 126524 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 126583 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 126584 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 126643 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126644 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 126703 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 126704 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 126743 Score = 729 bits (368), Expect = 0.0 Identities = 437/460 (95%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 108578 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 108519 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 108518 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 108459 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108458 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 108399 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 108398 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 108339 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 108338 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 108279 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108278 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 108219 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 108218 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 108179 Score = 280 bits (141), Expect = 6e-72 Identities = 181/193 (93%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126121 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 126179 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126180 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 126239 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| Sbjct: 126240 ttgttgaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgcc 126295 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 126296 gtagcgcctggta 126308 Score = 280 bits (141), Expect = 6e-72 Identities = 181/193 (93%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108801 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 108743 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108742 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 108683 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| Sbjct: 108682 ttgttgaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgcc 108627 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 108626 gtagcgcctggta 108614
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 722 bits (364), Expect = 0.0 Identities = 436/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 132436 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 132495 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132496 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132555 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132556 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132615 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132616 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 132675 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 132676 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 132735 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132736 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 132795 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 132796 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 132835 Score = 722 bits (364), Expect = 0.0 Identities = 436/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 106213 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 106154 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 106153 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 106094 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106093 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106034 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106033 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105974 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105973 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 105914 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105913 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 105854 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105853 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 105814 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132213 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 132271 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132272 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 132331 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 132332 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 132387 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 132388 gtagcgcctggta 132400 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106436 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 106378 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106377 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 106318 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 106317 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 106262 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 106261 gtagcgcctggta 106249
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 137981 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138040 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138041 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138100 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138101 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138160 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138161 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 138220 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 138221 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 138280 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138281 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 138340 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138341 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 138380 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111116 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111057 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111056 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110997 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110996 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110937 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110936 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 110877 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 110876 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 110817 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110816 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 110757 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110756 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 110717 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 137758 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 137816 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137817 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 137876 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 137877 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 137932 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 137933 gtagcgcctggta 137945 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111339 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 111281 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111280 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 111221 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 111220 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 111165 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 111164 gtagcgcctggta 111152
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 131475 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 131534 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131535 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131594 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131595 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131654 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131655 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 131714 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 131715 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 131774 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131775 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 131834 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131835 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 131874 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 105289 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 105230 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105229 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105170 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105169 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105110 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105109 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105050 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105049 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 104990 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104989 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 104930 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104929 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 104890 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131252 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 131310 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131311 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 131370 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 131371 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 131426 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 131427 gtagcgcctggta 131439 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105512 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 105454 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105453 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 105394 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 105393 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 105338 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 105337 gtagcgcctggta 105325
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 132700 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 132759 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132760 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132819 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132820 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132879 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 132939 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 132940 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 132999 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133000 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 133059 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 133060 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 133099 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105271 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105212 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105211 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105152 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105151 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105092 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105091 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105032 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 105031 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 104972 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104971 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 104912 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104911 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 104872 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132477 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 132535 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132536 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 132595 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 132596 ttgttaaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 132651 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 132652 gtagcgcctggta 132664 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105494 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 105436 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105435 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 105376 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 105375 ttgttaaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 105320 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 105319 gtagcgcctggta 105307
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 138186 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138245 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138246 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138305 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138306 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138365 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138366 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 138425 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 138426 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 138485 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 138486 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 138545 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138546 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 138585 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111113 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111054 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111053 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110994 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110993 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110934 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110933 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110874 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 110873 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 110814 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 110813 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 110754 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110753 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 110714 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 137963 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 138021 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138022 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 138081 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 138082 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 138137 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 138138 gtagcgcctggta 138150 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111336 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 111278 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111277 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 111218 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 111217 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 111162 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 111161 gtagcgcctggta 111149
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 714 bits (360), Expect = 0.0 Identities = 435/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||| | ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1158 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1099 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1098 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1039 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 979 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 978 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 919 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 918 agccgacattctcgcttccgcttcgtccacccccgctctcgcgggtgcttccctctaagg 859 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 858 cggaacgctcccctaccgatgcatttttacatcccgcagcttcggcagatcgcttagccc 799 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 798 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 759 Score = 236 bits (119), Expect = 8e-59 Identities = 172/189 (91%), Gaps = 12/189 (6%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1370 ccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcgc 1312 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgt 1252 Query: 128 tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 187 |||||||||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 1251 tgaaggtcgttcgagc-------gggagtatggcatgggt----tacttcagcgccgtag 1203 Query: 188 cgcctggta 196 | ||||||| Sbjct: 1202 cacctggta 1194
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131252 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131311 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131312 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131371 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131372 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131431 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131432 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131491 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131492 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131551 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 131552 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 131611 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131612 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 131651 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105626 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105567 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105566 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105507 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105506 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105447 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105446 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105387 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105386 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105327 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 105326 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 105267 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105266 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 105227 Score = 311 bits (157), Expect = 2e-81 Identities = 185/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131029 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 131087 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131088 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 131147 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131148 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgcc 131203 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 131204 gtagcgcctggta 131216 Score = 311 bits (157), Expect = 2e-81 Identities = 185/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105849 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 105791 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105790 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 105731 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105730 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgcc 105675 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 105674 gtagcgcctggta 105662
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130144 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 130203 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130204 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130263 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130264 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130323 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130324 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130383 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 130384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 130443 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 130444 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 130503 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130504 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 130543 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 104491 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 104432 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 104431 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 104372 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104371 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104312 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104311 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 104252 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 104251 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 104192 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 104191 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 104132 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104131 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 104092 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 129921 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 129979 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129980 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 130039 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 130040 ttgttgaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 130095 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 130096 gtagcgcctggta 130108 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104714 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 104656 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104655 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 104596 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 104595 ttgttgaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 104540 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 104539 gtagcgcctggta 104527
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 141416 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 141475 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141476 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 141535 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141536 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 141595 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 141596 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 141655 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 141656 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 141715 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 141716 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 141755 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 111912 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 111853 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111852 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111793 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111792 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 111733 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 111732 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 111673 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 111672 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 111613 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111612 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 111573 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141133 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 141191 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141192 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 141251 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 141252 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 141307 Query: 184 gtagcgcctggta 196 ||||||| ||||| Sbjct: 141308 gtagcgcttggta 141320 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112195 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 112137 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112136 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 112077 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 112076 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 112021 Query: 184 gtagcgcctggta 196 ||||||| ||||| Sbjct: 112020 gtagcgcttggta 112008
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 135069 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 135128 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 135129 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 135188 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135189 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135248 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135249 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135308 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 135309 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 135368 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135369 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135428 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135429 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 135468 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 107356 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 107297 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107296 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107237 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107236 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107177 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107176 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107117 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 107116 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 107057 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107056 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 106997 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106996 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106957 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134846 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134904 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 134905 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtaccctt 134964 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| Sbjct: 134965 ttgttgaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgcc 135020 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 135021 gtagcgcctggta 135033 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107579 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107521 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107520 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtaccctt 107461 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| Sbjct: 107460 ttgttgaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcgcc 107405 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 107404 gtagcgcctggta 107392
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131245 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131304 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131305 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131364 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131365 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131424 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131425 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131484 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131485 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131544 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 131545 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 131604 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131605 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 131644 Score = 698 bits (352), Expect = 0.0 Identities = 433/460 (94%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105624 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105565 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105564 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105505 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105504 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105445 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105444 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105385 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105325 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 105324 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 105265 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105264 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 105225 Score = 311 bits (157), Expect = 2e-81 Identities = 185/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131022 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 131080 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131081 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 131140 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131141 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgcc 131196 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 131197 gtagcgcctggta 131209 Score = 311 bits (157), Expect = 2e-81 Identities = 185/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105847 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 105789 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105788 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 105729 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105728 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcgcc 105673 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 105672 gtagcgcctggta 105660
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 692 bits (349), Expect = 0.0 Identities = 434/461 (94%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055 Query: 297 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 355 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 138056 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 138115 Query: 356 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 415 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 138116 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 138175 Query: 416 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138176 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 138235 Query: 476 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 535 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138236 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 138295 Query: 536 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 595 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 138296 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 138355 Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138356 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagcc 138415 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138416 ccgttcatcttcggcgcaagagcgctcgatcagtgagctat 138456 Score = 692 bits (349), Expect = 0.0 Identities = 434/461 (94%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890 Query: 297 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 355 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 111889 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 111830 Query: 356 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 415 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 111829 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 111770 Query: 416 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111769 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 111710 Query: 476 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 535 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111709 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 111650 Query: 536 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 595 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 111649 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 111590 Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111589 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagcc 111530 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111529 ccgttcatcttcggcgcaagagcgctcgatcagtgagctat 111489 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 137833 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 137891 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137892 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 137951 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 137952 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 138007 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 138008 gtagcgcctggta 138020 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112112 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 112054 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112053 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 111994 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 111993 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 111938 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 111937 gtagcgcctggta 111925 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 447 aggccctgactcaccctccgtgga 470 |||||||||||||||||||||||| Sbjct: 144304 aggccctgactcaccctccgtgga 144327 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 447 aggccctgactcaccctccgtgga 470 |||||||||||||||||||||||| Sbjct: 105641 aggccctgactcaccctccgtgga 105618
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 690 bits (348), Expect = 0.0 Identities = 432/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 | |||||||||| | | ||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1522 ttttaccctgaacacaccgggacaccttgcgtccttgaaccgataaccatctttcggcta 1463 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1462 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1403 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1343 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1342 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 1283 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 1282 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 1223 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 1163 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1162 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 1123 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1745 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1687 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 1627 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| Sbjct: 1626 ttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcgcc 1571 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 1570 gtagcgcctggta 1558
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 682 bits (344), Expect = 0.0 Identities = 433/460 (94%), Gaps = 2/460 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 474 tcttaccctgaaaaaacagggacaccgtgcgtccttgaaccgataaccatctttcggcta 415 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 414 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcgcctgttg 355 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 295 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 294 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 235 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| | Sbjct: 234 agccgacattctcgcttccgcttcgtccacccccgctcgcgcgggtgcttccctctaa-g 176 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 175 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 116 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 115 cgttcatcttc-gcgcaagagcgctcgatcagtgagctat 77 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 697 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 639 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 579 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 578 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 523 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 522 gtagcgcctggta 510
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 674 bits (340), Expect = 0.0 Identities = 430/460 (93%), Gaps = 5/460 (1%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 87780 tcttaccctgaaa-----gggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 87725 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 87666 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87665 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 87606 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87605 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 87546 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || ||| ||| | |||||| |||| ||| Sbjct: 87545 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttctctctgagg 87486 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 87485 cggaacgctcccctaccgatgtattttgacatcccacagcttcggcagatcgcttagtcc 87426 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 87425 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 87386 Score = 272 bits (137), Expect = 1e-69 Identities = 180/193 (93%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 88003 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 87945 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 87944 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccat 87885 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 87884 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgct 87829 Query: 184 gtagcgcctggta 196 ||||||| ||||| Sbjct: 87828 gtagcgcttggta 87816
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 674 bits (340), Expect = 0.0 Identities = 430/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||| ||||||||||||||| Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1524 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1465 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1464 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1405 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1345 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1285 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| |||||| Sbjct: 1284 agccgacattctcgcttccgcttcgtctaccgctgctcgcgcaggtgcttccccctaagg 1225 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1224 cggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatcgcttagccc 1165 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1164 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 1125 Score = 295 bits (149), Expect = 1e-76 Identities = 183/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1747 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1689 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1688 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtaccctt 1629 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 1628 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 1573 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 1572 gtagcgcctggta 1560
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134378 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134437 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134438 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134497 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134498 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134557 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134558 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134617 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134618 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134677 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134678 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 134737 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134738 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134777 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107528 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107469 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107468 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107409 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107408 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107349 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107348 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107289 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107288 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107229 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107228 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 107169 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107168 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107129 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134155 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134213 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134214 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 134273 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134274 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134329 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 134330 gtagcgcctggta 134342 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107751 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107693 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107692 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 107633 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107632 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107577 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 107576 gtagcgcctggta 107564
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134657 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134716 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134717 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134776 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134836 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134837 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134896 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134897 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134956 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134957 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 135016 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135017 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 135056 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107750 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107691 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107690 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107631 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107630 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107571 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107570 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107511 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107510 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107451 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107450 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 107391 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107390 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107351 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134434 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134492 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134493 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 134552 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134553 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134608 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 134609 gtagcgcctggta 134621 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107973 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107915 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107914 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 107855 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107854 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107799 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 107798 gtagcgcctggta 107786
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 129007 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 129066 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 129067 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 129126 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129127 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 129186 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 129187 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 129246 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 129247 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 129306 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 129307 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgcttagccc 129366 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 129367 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 129406 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 103449 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 103390 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103389 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103330 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103329 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 103270 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 103269 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 103210 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 103209 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 103150 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 103149 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgcttagccc 103090 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 103089 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 103050 Score = 281 bits (142), Expect = 1e-72 Identities = 183/194 (94%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 128783 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 128841 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-t 122 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 128842 tcgcgcctctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 128901 Query: 123 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 128902 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgc 128957 Query: 183 cgtagcgcctggta 196 |||||||||||||| Sbjct: 128958 cgtagcgcctggta 128971 Score = 281 bits (142), Expect = 1e-72 Identities = 183/194 (94%), Gaps = 6/194 (3%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 103673 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 103615 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-t 122 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103614 tcgcgcctctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 103555 Query: 123 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 103554 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgc 103499 Query: 183 cgtagcgcctggta 196 |||||||||||||| Sbjct: 103498 cgtagcgcctggta 103485
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134506 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134565 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134566 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134625 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134626 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134685 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134686 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134745 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134746 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134805 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 134806 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 134865 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134866 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134905 Score = 666 bits (336), Expect = 0.0 Identities = 429/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107632 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107573 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107572 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107513 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107512 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107453 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107452 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107393 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107392 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107333 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107332 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107273 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107272 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107233 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134283 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134341 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134342 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 134401 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134402 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134457 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134458 gtagcgcctggtat 134471 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107855 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107797 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107796 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107737 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107736 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107681 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107680 gtagcgcctggtat 107667
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134777 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134836 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134837 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134896 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134897 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134956 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134957 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135016 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135017 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135076 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135077 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135136 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135137 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 135176 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107853 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107794 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107793 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107734 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107733 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107674 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107673 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107614 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107613 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107554 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107553 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107494 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107493 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107454 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134554 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134612 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134613 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 134672 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134673 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134728 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134729 gtagcgcctggtat 134742 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108076 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 108018 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108017 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107958 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107957 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107902 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107901 gtagcgcctggtat 107888
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 658 bits (332), Expect = 0.0 Identities = 435/469 (92%), Gaps = 9/469 (1%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 138835 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 138894 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138895 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138954 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138955 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 139014 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139015 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 139074 Query: 537 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 139075 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 139134 Query: 595 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 647 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 139135 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 139194 Query: 648 gcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 139195 gcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 139243 Score = 658 bits (332), Expect = 0.0 Identities = 435/469 (92%), Gaps = 9/469 (1%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 111225 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 111166 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111165 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 111106 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111105 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111046 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111045 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110986 Query: 537 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 110985 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 110926 Query: 595 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 647 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 110925 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 110866 Query: 648 gcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110865 gcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 110817 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138612 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 138670 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138671 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 138730 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 138731 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 138786 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 138787 gtagcgcctggta 138799 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111448 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 111390 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111389 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 111330 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 111329 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 111274 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 111273 gtagcgcctggta 111261
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 658 bits (332), Expect = 0.0 Identities = 433/465 (93%), Gaps = 5/465 (1%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578 Query: 297 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 351 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 140579 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 140638 Query: 352 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 411 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 140639 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 140698 Query: 412 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140699 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 140758 Query: 472 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 531 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 140759 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 140818 Query: 532 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 591 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 140819 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 140878 Query: 592 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 651 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140879 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 140938 Query: 652 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 140939 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 140983 Score = 658 bits (332), Expect = 0.0 Identities = 433/465 (93%), Gaps = 5/465 (1%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079 Query: 297 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 351 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 113078 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 113019 Query: 352 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 411 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 113018 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 112959 Query: 412 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112958 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 112899 Query: 472 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 531 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 112898 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 112839 Query: 532 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 591 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 112838 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 112779 Query: 592 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 651 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112778 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 112719 Query: 652 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 112718 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 112674 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 140356 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 140414 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 140415 tcgtgcccctaggtattctctacctacccacctgtgttggtttcgggtacaggtaccctt 140474 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 140475 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 140530 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 140531 gtagcgcctggta 140543 Score = 287 bits (145), Expect = 2e-74 Identities = 182/193 (94%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113301 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 113243 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 113242 tcgtgcccctaggtattctctacctacccacctgtgttggtttcgggtacaggtaccctt 113183 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 113182 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 113127 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 113126 gtagcgcctggta 113114
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 135415 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 135474 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 135475 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 135534 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135594 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135595 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135654 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 135655 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 135714 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135715 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135774 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135775 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 135814 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 108142 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 108083 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 108082 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 108023 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108022 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107963 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107962 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107903 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 107902 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 107843 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107842 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107783 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107782 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107743 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135192 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 135250 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135251 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 135310 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 135311 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 135366 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 135367 gtagcgcctggtat 135380 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108365 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 108307 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108306 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 108247 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 108246 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 108191 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 108190 gtagcgcctggtat 108177
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3047 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 2988 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 2987 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 2928 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2927 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 2868 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2867 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 2808 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 2807 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2748 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2747 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 2688 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2687 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 2648 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3270 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 3212 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3211 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 3152 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 3151 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 3096 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 3095 gtagcgcctggtat 3082
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134023 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134082 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134083 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134142 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134143 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134202 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134203 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134262 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134263 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134322 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134323 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134382 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134383 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134422 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107013 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106954 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106953 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106894 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106834 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106833 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106774 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106773 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106714 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106713 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106654 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106653 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106614 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133800 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133858 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133859 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 133918 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 133919 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 133974 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 133975 gtagcgcctggtat 133988 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107236 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107178 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107177 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107118 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107117 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107062 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107061 gtagcgcctggtat 107048
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134158 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134217 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134218 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134277 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134278 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134337 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134338 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134397 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134398 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134457 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134458 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134517 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134518 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134557 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107185 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107126 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107125 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107066 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107065 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107006 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107005 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106946 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106945 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106886 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106885 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106826 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106825 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106786 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133935 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133993 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133994 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 134053 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134054 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134109 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134110 gtagcgcctggtat 134123 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107408 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107350 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107349 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107290 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107289 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107234 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107233 gtagcgcctggtat 107220
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134156 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134215 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134216 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134275 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134276 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134335 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134336 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134395 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134396 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134455 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134456 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134515 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134516 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134555 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107182 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107123 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107122 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107063 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107062 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107003 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107002 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106943 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106942 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106883 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106882 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106823 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106822 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106783 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133933 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133991 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133992 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 134051 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134052 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134107 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134108 gtagcgcctggtat 134121 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107405 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107347 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107346 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107287 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107286 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107231 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107230 gtagcgcctggtat 107217
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134068 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134127 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134128 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134187 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134188 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134247 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134248 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134307 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134308 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134367 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134368 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134427 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134428 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134467 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107060 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107001 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107000 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106941 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106940 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106881 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106821 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106820 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106761 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106760 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106701 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106700 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106661 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133845 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133903 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133904 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 133963 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 133964 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134019 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134020 gtagcgcctggtat 134033 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107283 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107225 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107224 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107165 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107164 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107109 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107108 gtagcgcctggtat 107095
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 130404 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 130463 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130464 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130523 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 130524 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 130583 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 130584 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 130643 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 130644 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgcttagccc 130703 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130704 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 130743 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 104990 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 104931 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104871 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 104870 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 104811 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 104810 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 104751 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 104750 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgcttagccc 104691 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104690 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 104651 Score = 272 bits (137), Expect = 1e-69 Identities = 180/193 (93%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130121 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 130179 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130180 tcgcgcctctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccat 130239 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| Sbjct: 130240 ttgttgaaggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgct 130295 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 130296 gtagcgcctggta 130308 Score = 272 bits (137), Expect = 1e-69 Identities = 180/193 (93%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105273 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 105215 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105214 tcgcgcctctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccat 105155 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| Sbjct: 105154 ttgttgaaggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgct 105099 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 105098 gtagcgcctggta 105086
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134775 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134834 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134835 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134894 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134895 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134954 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134955 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135014 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135015 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135074 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135075 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135134 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135135 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 135174 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107851 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107792 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107791 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107732 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107731 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107672 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107671 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107612 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107611 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107552 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107551 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107492 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107491 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 107452 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134552 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 134610 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134611 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 134670 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 134671 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 134726 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 134727 gtagcgcctggtat 134740 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108074 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 108016 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108015 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107956 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107955 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107900 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107899 gtagcgcctggtat 107886
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134035 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134094 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134095 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134154 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134155 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134214 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134215 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134274 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134275 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134334 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134335 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134394 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134395 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 134434 Score = 658 bits (332), Expect = 0.0 Identities = 428/460 (93%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107027 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106968 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106967 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106908 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106907 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106848 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106847 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106788 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106787 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106728 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106727 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106668 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106667 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 106628 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133812 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133870 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133871 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 133930 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 133931 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 133986 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 133987 gtagcgcctggtat 134000 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107250 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 107192 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107191 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 107132 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 107131 ttgcttaacgtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 107076 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 107075 gtagcgcctggtat 107062
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 656 bits (331), Expect = 0.0 Identities = 428/460 (93%), Gaps = 4/460 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||| |||| |||||| |||||| |||| |||||||||||||||||| Sbjct: 89868 tcttaccctgaaaa----gggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 89812 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 89753 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89752 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 89693 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89692 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 89633 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| || || ||| ||| | ||||||||||| ||| Sbjct: 89632 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttccctctgagg 89573 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 89572 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagtcc 89513 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||| | |||||||||||||||||||| Sbjct: 89512 cgttcatcttcggcgcacgagcgctcgatcagtgagctat 89473 Score = 278 bits (140), Expect = 2e-71 Identities = 161/167 (96%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 90091 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 90033 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90032 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtaccctt 89973 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttac 170 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 89972 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttac 89926
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 652 bits (329), Expect = 0.0 Identities = 432/465 (92%), Gaps = 6/465 (1%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463 Query: 297 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 351 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 133523 Query: 352 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 411 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 133524 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 133583 Query: 412 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133584 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 133643 Query: 472 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 531 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 133644 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 133703 Query: 532 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 591 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 133704 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 133763 Query: 592 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 651 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133764 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 133822 Query: 652 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 133823 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 133867 Score = 652 bits (329), Expect = 0.0 Identities = 432/465 (92%), Gaps = 6/465 (1%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819 Query: 297 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 351 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 106759 Query: 352 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 411 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 106758 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 106699 Query: 412 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106698 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 106639 Query: 472 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 531 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 106638 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 106579 Query: 532 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 591 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 106578 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 106519 Query: 592 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 651 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106518 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 106460 Query: 652 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106459 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 106415 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133241 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 133299 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133300 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 133359 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 133360 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 133415 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 133416 gtagcgcctggta 133428 Score = 303 bits (153), Expect = 4e-79 Identities = 184/193 (95%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107041 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 106983 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106982 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 106923 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 106922 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 106867 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 106866 gtagcgcctggta 106854
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 650 bits (328), Expect = 0.0 Identities = 427/460 (92%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3292 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 3233 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 3232 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 3173 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3172 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 3113 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3112 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 3053 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 3052 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2993 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2992 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 2933 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 2932 cgttcatcttcggcgcaagagcgctcgatcagtgsgctat 2893 Score = 262 bits (132), Expect = 1e-66 Identities = 167/177 (94%), Gaps = 5/177 (2%) Strand = Plus / Minus Query: 21 agttacggggctattttgccgagttccttagnagagagttgtctcgcgcccctaggtatt 80 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3498 agttacggggctattttgccgagttccttag-agagagttgtctcgcgcccctaggtatt 3440 Query: 81 ctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg 140 |||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||| Sbjct: 3439 ctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcg 3380 Query: 141 agcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 197 ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3379 agcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3327
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 636 bits (321), Expect = e-179 Identities = 427/461 (92%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745 Query: 297 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 355 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 5744 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 5685 Query: 356 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 415 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 5684 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 5625 Query: 416 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 5565 Query: 476 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 535 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5564 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 5505 Query: 536 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 595 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 5504 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 5445 Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 5444 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgcttagcc 5385 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 5384 ccgttcatcttcggcgcaagagcgctcgatcagtgagctat 5344 Score = 266 bits (134), Expect = 9e-68 Identities = 155/161 (96%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5967 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 5909 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5908 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 5849 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 164 ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 5848 ttgtttaaggtcgttcgagcttttcttgggagtatggcatc 5808
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 636 bits (321), Expect = e-179 Identities = 427/461 (92%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180 Query: 297 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 355 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 22181 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 22240 Query: 356 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 415 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 22241 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 22300 Query: 416 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22301 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 22360 Query: 476 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 535 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 22361 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 22420 Query: 536 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 595 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 22421 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 22480 Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 22481 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgcttagcc 22540 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 22541 ccgttcatcttcggcgcaagagcgctcgatcagtgagctat 22581 Score = 266 bits (134), Expect = 9e-68 Identities = 155/161 (96%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 21958 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 22016 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22017 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 22076 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 164 ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 22077 ttgtttaaggtcgttcgagcttttcttgggagtatggcatc 22117
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 630 bits (318), Expect = e-177 Identities = 415/446 (93%), Gaps = 1/446 (0%) Strand = Plus / Minus Query: 251 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 310 ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| || Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606 Query: 311 agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 370 ||||||| |||||| || ||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1605 agcagggacaccttacgttcttgaaccgataaccatctttcggctaacctagcctcctcc 1546 Query: 371 gtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgc 430 ||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||| || Sbjct: 1545 gtccctcgggaccaacaaggggcagtacaggaatattcacctgttgtccatcgacta-gc 1487 Query: 431 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacc 490 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1486 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaccc 1427 Query: 491 ttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcg 550 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1426 ttaggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcg 1367 Query: 551 cttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccct 610 ||||||||||||| ||| ||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1366 cttccgcttcgtccaccaccgctcgcgcggaggcttctctctaaggcggaacgctcccct 1307 Query: 611 accgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagc 670 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1306 accgatgtatttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggc 1247 Query: 671 gcaagggcgctcgatcagtgagctat 696 ||||| |||||||||||||||||||| Sbjct: 1246 gcaagagcgctcgatcagtgagctat 1221 Score = 254 bits (128), Expect = 3e-64 Identities = 158/167 (94%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1841 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1783 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 1723 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttac 170 ||| | || ||||||||||||||||||||||||||||||| |||||| Sbjct: 1722 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggttac 1676
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 613 bits (309), Expect = e-172 Identities = 426/461 (92%), Gaps = 3/461 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||| |||| || | ||||||||| ||||||||||||||| Sbjct: 1598 tacttcagcgccgtagcgcctggt-ctcgaacattggctcgaggtattttctctacccct 1540 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1539 tcttaccctgaaaa-gcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1481 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1480 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1421 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccct-ccgtggacgaac 475 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1420 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctaccgtggacgaac 1361 Query: 476 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 535 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1360 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 1301 Query: 536 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 595 |||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| ||||| Sbjct: 1300 aagccgacattctcgcttccgcttcgtctaccactgctcgcgcaggtgcttccccctaag 1241 Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 1240 acggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatcacttagcc 1181 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1180 ccgttcatcttcggcgcaagagcgctcgatcagtgagctat 1140 Score = 278 bits (140), Expect = 2e-71 Identities = 180/192 (93%), Gaps = 5/192 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1761 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1703 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1702 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtaccctt 1643 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 1642 ttgttgaaggtcgttcgagcttttcctgggagtatggctagggt----tacttcagcgcc 1587 Query: 184 gtagcgcctggt 195 |||||||||||| Sbjct: 1586 gtagcgcctggt 1575
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 613 bits (309), Expect = e-172 Identities = 426/460 (92%), Gaps = 5/460 (1%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||||| |||||| |||||||| || | ||||||||||||||||||||||||| Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 | ||||||||||||||||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 791 tattaccctgaaaaagcaggggcaccatgcgtccttgaaccgataaccatctttcggcta 732 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 731 acctagcctcctccgtccctcgg-accaacaaagggtagtacaggaatattcacctgttg 673 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 tccatcgactacg--tttcggcctgatcttaggccctgactcaccctccgtggacgaacc 615 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 614 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 555 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| | | | ||| ||||| | |||||| |||||| Sbjct: 554 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccccctaagg 495 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 494 cggaacg-tcccctaccgattcattttgacatcccacagcttcggcagatcgcttagccc 436 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 435 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 396 Score = 272 bits (137), Expect = 1e-69 Identities = 155/160 (96%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1013 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 955 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 954 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccat 895 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 |||||||||||||||||||||||||||||||||||||||| Sbjct: 894 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 855
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 611 bits (308), Expect = e-171 Identities = 423/460 (91%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctttcgtccttgaaccgataaccatctttcggcta 1960 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||||||| Sbjct: 1959 acctagcctcctccgtccctcgggccctacaaggggtagtacaggaatattcacctgttg 1900 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1840 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1839 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1780 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||||||||||||||||| | ||| ||| | |||||||| |||| Sbjct: 1779 agccgacattctcgcttccgcttcgtctggcatggctcgcgccgatgcttccccctaaca 1720 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1719 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagatcgcttagccc 1660 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1659 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 1620 Score = 301 bits (152), Expect = 2e-78 Identities = 186/196 (94%), Gaps = 5/196 (2%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 2244 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 2186 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2185 gtctcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacc 2126 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 2125 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagc 2070 Query: 181 gccgtagcgcctggta 196 |||||||||||||||| Sbjct: 2069 gccgtagcgcctggta 2054
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 607 bits (306), Expect = e-170 Identities = 306/306 (100%) Strand = Plus / Minus Query: 391 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 388 Query: 451 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 328 Query: 511 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 268 Query: 571 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 208 Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 148 Query: 691 agctat 696 |||||| Sbjct: 147 agctat 142
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 579 bits (292), Expect = e-162 Identities = 298/300 (99%) Strand = Plus / Plus Query: 397 acaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgac 456 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 acaggaatattgacctgttgtccatcgagtacgcctttcggcctgatcttaggccctgac 60 Query: 457 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 120 Query: 517 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 180 Query: 577 gcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 636 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 240 Query: 637 ttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 300
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 569 bits (287), Expect = e-159 Identities = 391/422 (92%), Gaps = 4/422 (0%) Strand = Plus / Minus Query: 279 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 334 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 335 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 394 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 694 ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5677 gcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagct 5618 Query: 695 at 696 || Sbjct: 5617 at 5616 Score = 250 bits (126), Expect = 5e-63 Identities = 153/161 (95%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6253 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 6195 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6194 tcgcgcccctaggtattctctacctacccacctgtgtcggtttccggtacaggtaccctc 6135 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 164 |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 6134 ttgttgtaggtcgttcgaacttttcctgggagtatggcatc 6094
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 569 bits (287), Expect = e-159 Identities = 391/422 (92%), Gaps = 4/422 (0%) Strand = Plus / Minus Query: 279 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 334 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 335 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 394 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 694 ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5677 gcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagct 5618 Query: 695 at 696 || Sbjct: 5617 at 5616 Score = 250 bits (126), Expect = 5e-63 Identities = 153/161 (95%), Gaps = 1/161 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6253 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 6195 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6194 tcgcgcccctaggtattctctacctacccacctgtgtcggtttccggtacaggtaccctc 6135 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 164 |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 6134 ttgttgtaggtcgttcgaacttttcctgggagtatggcatc 6094
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 557 bits (281), Expect = e-155 Identities = 353/377 (93%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 1385 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1384 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1325 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1324 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1265 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 1264 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 1205 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 1204 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 1145 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 1144 cttgatcagtgagctat 1128 Score = 214 bits (108), Expect = 3e-52 Identities = 153/167 (91%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1755 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 1697 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1696 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 1637 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttac 170 ||||| | ||||||||||||||||| ||| ||| |||||| |||||| Sbjct: 1636 ttgttaatggtcgttcgagcttttcttggaagtgtggcattggttac 1590 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 gtactcggacctcggctcgaggcattttctctaccc 294 |||||| ||| | ||||||||||||||||||||||| Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 557 bits (281), Expect = e-155 Identities = 353/377 (93%) Strand = Plus / Plus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 116764 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 116765 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 116824 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 116825 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 116884 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 116885 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 116944 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 116945 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 117004 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 117005 cttgatcagtgagctat 117021 Score = 557 bits (281), Expect = e-155 Identities = 353/377 (93%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 91338 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 91337 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 91278 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91277 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 91218 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 91217 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 91158 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 91157 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 91098 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 91097 cttgatcagtgagctat 91081 Score = 224 bits (113), Expect = 3e-55 Identities = 174/193 (90%), Gaps = 5/193 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 116394 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 116452 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 116453 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 116512 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||| ||| |||||| | | ||||||||| || Sbjct: 116513 ttgttaaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcacc 116568 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 116569 gtagcgcctggta 116581 Score = 224 bits (113), Expect = 3e-55 Identities = 174/193 (90%), Gaps = 5/193 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 91708 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 91650 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 91649 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 91590 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||| ||| |||||| | | ||||||||| || Sbjct: 91589 ttgttaaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcacc 91534 Query: 184 gtagcgcctggta 196 ||||||||||||| Sbjct: 91533 gtagcgcctggta 91521 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 116557 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 116616 Query: 297 tcttacc 303 | ||||| Sbjct: 116617 ttttacc 116623 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 91545 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 91486 Query: 297 tcttacc 303 | ||||| Sbjct: 91485 ttttacc 91479
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 533 bits (269), Expect = e-148 Identities = 401/445 (90%), Gaps = 5/445 (1%) Strand = Plus / Plus Query: 257 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 316 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 145041 Query: 317 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 371 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 145042 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 145101 Query: 372 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 431 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 145102 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 145161 Query: 432 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 491 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145162 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 145221 Query: 492 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 551 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145222 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 145281 Query: 552 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 611 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 145282 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 145341 Query: 612 ccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcg 671 |||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| Sbjct: 145342 ccgatgttttttgacatcccacagcttcggcagaccgcttagtcccgttcattttcggcg 145401 Query: 672 caagggcgctcgatcagtgagctat 696 |||| ||||| |||||||||||||| Sbjct: 145402 caagagcgcttgatcagtgagctat 145426 Score = 533 bits (269), Expect = e-148 Identities = 401/445 (90%), Gaps = 5/445 (1%) Strand = Plus / Minus Query: 257 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 316 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 113421 Query: 317 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 371 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 113420 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 113361 Query: 372 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 431 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 113360 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 113301 Query: 432 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 491 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 113300 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 113241 Query: 492 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 551 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113240 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 113181 Query: 552 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 611 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 113180 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 113121 Query: 612 ccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcg 671 |||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| Sbjct: 113120 ccgatgttttttgacatcccacagcttcggcagaccgcttagtcccgttcattttcggcg 113061 Query: 672 caagggcgctcgatcagtgagctat 696 |||| ||||| |||||||||||||| Sbjct: 113060 caagagcgcttgatcagtgagctat 113036 Score = 232 bits (117), Expect = 1e-57 Identities = 150/160 (93%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 144799 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 144857 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 144858 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 144917 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 | ||||||||||||||||||||||| ||||||| |||||| Sbjct: 144918 tcgttgaaggtcgttcgagcttttcttgggagtgtggcat 144957 Score = 232 bits (117), Expect = 1e-57 Identities = 150/160 (93%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113663 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 113605 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 113604 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 113545 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 | ||||||||||||||||||||||| ||||||| |||||| Sbjct: 113544 tcgttgaaggtcgttcgagcttttcttgggagtgtggcat 113505
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 529 bits (267), Expect = e-147 Identities = 414/462 (89%), Gaps = 2/462 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 297 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 354 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 355 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 414 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 415 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 475 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 534 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 535 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 595 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 654 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 1173 Query: 655 cccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||| ||||||||| ||||||| ||||| |||||||||||||| Sbjct: 1172 cccattcatcttcggcgcaagagcgcttgatcagtgagctat 1131 Score = 226 bits (114), Expect = 8e-56 Identities = 175/194 (90%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1755 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1697 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1696 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccac 1637 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 1636 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 1581 Query: 184 gtagcgcctggtat 197 ||||| ||| |||| Sbjct: 1580 gtagcacctagtat 1567
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 529 bits (267), Expect = e-147 Identities = 414/462 (89%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 149653 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 149712 Query: 297 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 354 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 149713 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 149772 Query: 355 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 414 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 149773 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 149832 Query: 415 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 149892 Query: 475 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 534 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149893 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 149952 Query: 535 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 149953 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 150012 Query: 595 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 654 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 150013 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 150072 Query: 655 cccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||| ||||||||| ||||||| ||||| |||||||||||||| Sbjct: 150073 cccattcatcttcggcgcaagagcgcttgatcagtgagctat 150114 Score = 529 bits (267), Expect = e-147 Identities = 414/462 (89%), Gaps = 2/462 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 119013 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 118954 Query: 297 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 354 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 118953 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 118894 Query: 355 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 414 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 118893 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 118834 Query: 415 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 118774 Query: 475 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 534 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118773 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 118714 Query: 535 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 118713 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 118654 Query: 595 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 654 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 118653 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 118594 Query: 655 cccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||| ||||||||| ||||||| ||||| |||||||||||||| Sbjct: 118593 cccattcatcttcggcgcaagagcgcttgatcagtgagctat 118552 Score = 226 bits (114), Expect = 8e-56 Identities = 175/194 (90%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 149490 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 149548 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 149549 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccac 149608 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 149609 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 149664 Query: 184 gtagcgcctggtat 197 ||||| ||| |||| Sbjct: 149665 gtagcacctagtat 149678 Score = 226 bits (114), Expect = 8e-56 Identities = 175/194 (90%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 119176 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 119118 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 119117 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccac 119058 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 119057 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 119002 Query: 184 gtagcgcctggtat 197 ||||| ||| |||| Sbjct: 119001 gtagcacctagtat 118988
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 529 bits (267), Expect = e-147 Identities = 414/462 (89%), Gaps = 2/462 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 297 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 354 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 355 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 414 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 415 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 475 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 534 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 535 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 595 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 654 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 1173 Query: 655 cccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||| ||||||||| ||||||| ||||| |||||||||||||| Sbjct: 1172 cccattcatcttcggcgcaagagcgcttgatcagtgagctat 1131 Score = 226 bits (114), Expect = 8e-56 Identities = 175/194 (90%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1755 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1697 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1696 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccac 1637 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 1636 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 1581 Query: 184 gtagcgcctggtat 197 ||||| ||| |||| Sbjct: 1580 gtagcacctagtat 1567
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 527 bits (266), Expect = e-146 Identities = 416/464 (89%), Gaps = 4/464 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 51097 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 51156 Query: 297 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 352 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 51157 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 51216 Query: 353 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 412 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 51217 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 51276 Query: 413 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 472 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51277 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 51336 Query: 473 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 532 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 51337 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 51396 Query: 533 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 592 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 51397 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 51456 Query: 593 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 652 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 51457 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 51516 Query: 653 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||| ||||||| ||||||||||||| |||||| Sbjct: 51517 gccccgttcatattcggcgcaagagcgctcgatcagtaagctat 51560 Score = 527 bits (266), Expect = e-146 Identities = 416/464 (89%), Gaps = 4/464 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 38731 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 38672 Query: 297 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 352 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 38671 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 38612 Query: 353 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 412 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 38611 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 38552 Query: 413 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 472 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38551 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 38492 Query: 473 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 532 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 38491 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 38432 Query: 533 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 592 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 38431 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 38372 Query: 593 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 652 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 38371 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 38312 Query: 653 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||| ||||||| ||||||||||||| |||||| Sbjct: 38311 gccccgttcatattcggcgcaagagcgctcgatcagtaagctat 38268 Score = 232 bits (117), Expect = 1e-57 Identities = 176/193 (91%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 50933 ggcaccccttctcccgaagttatggggctattttgccgagttccttag-agagagttgtc 50991 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 50992 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgccctt 51051 Query: 124 ttg-ttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||| || |||| ||||||||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 51052 ttgtttaaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgc 51107 Query: 183 cgtagcgcctggt 195 ||||||||||||| Sbjct: 51108 cgtagcgcctggt 51120 Score = 232 bits (117), Expect = 1e-57 Identities = 176/193 (91%), Gaps = 6/193 (3%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 38895 ggcaccccttctcccgaagttatggggctattttgccgagttccttag-agagagttgtc 38837 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 38836 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgccctt 38777 Query: 124 ttg-ttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||| || |||| ||||||||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 38776 ttgtttaaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgc 38721 Query: 183 cgtagcgcctggt 195 ||||||||||||| Sbjct: 38720 cgtagcgcctggt 38708
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 527 bits (266), Expect = e-146 Identities = 351/378 (92%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| | Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446 Query: 380 taccaacaagggg-tagtacaggaatattgacctgttgtccatcgactacgcctttcggc 438 |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgttgtccatcgactacgcctttcggc 1386 Query: 439 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 498 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1385 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1326 Query: 499 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 558 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1325 tcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgct 1266 Query: 559 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 618 ||||| || || ||| ||| | |||||||| ||||||||||||||||||||||||||| Sbjct: 1265 tcgtccacacctgctcgcgctggtgcttccccctaaggcggaacgctcccctaccgatgt 1206 Query: 619 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 678 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| || Sbjct: 1205 tttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagc 1146 Query: 679 gctcgatcagtgagctat 696 ||| |||||||||||||| Sbjct: 1145 gcttgatcagtgagctat 1128 Score = 250 bits (126), Expect = 5e-63 Identities = 175/190 (92%), Gaps = 5/190 (2%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1754 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcg 1696 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg 126 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1695 cgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttg 1636 Query: 127 ttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgta 186 |||||||||||||||||||||| ||||||| |||||| ||| ||||||||| ||||| Sbjct: 1635 ttgaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcagcaccgta 1580 Query: 187 gcgcctggta 196 |||||||||| Sbjct: 1579 gcgcctggta 1570 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||| | | ||||| |||||||||||| | |||| |||| ||||||||||||||| Sbjct: 1594 tacttcagcaccgtagcgcctggtactcggacgttggcttgaggtattttctctacccct 1535 Query: 297 tcttaccct 305 |||||||| Sbjct: 1534 ccttaccct 1526
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 527 bits (266), Expect = e-146 Identities = 416/464 (89%), Gaps = 4/464 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 5659 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 5600 Query: 297 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 352 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 5599 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 5540 Query: 353 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 412 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 5539 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 5480 Query: 413 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 472 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5479 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 5420 Query: 473 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 532 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 5419 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 5360 Query: 533 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 592 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 5359 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 5300 Query: 593 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 652 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 5299 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 5240 Query: 653 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||| ||||||| ||||||||||||| |||||| Sbjct: 5239 gccccgttcatattcggcgcaagagcgctcgatcagtaagctat 5196 Score = 232 bits (117), Expect = 1e-57 Identities = 176/193 (91%), Gaps = 6/193 (3%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 5823 ggcaccccttctcccgaagttatggggctattttgccgagttccttag-agagagttgtc 5765 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 5764 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtgccctt 5705 Query: 124 ttg-ttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||| || |||| ||||||||||||||| ||||||||||| | ||| ||||||||||| Sbjct: 5704 ttgtttaaaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgc 5649 Query: 183 cgtagcgcctggt 195 ||||||||||||| Sbjct: 5648 cgtagcgcctggt 5636
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 525 bits (265), Expect = e-146 Identities = 349/377 (92%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 |||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 5278 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5277 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 5218 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5217 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 5158 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 5157 cgtccacacctgctcacgctggtgcttccctctaaggcggaacgctcccctaccgatgta 5098 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 ||| |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 5097 tttcgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcg 5038 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 5037 cttgatcagtgagctat 5021 Score = 226 bits (114), Expect = 8e-56 Identities = 175/194 (90%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5645 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 5587 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 5586 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtatccac 5527 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 5526 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 5471 Query: 184 gtagcgcctggtat 197 ||||| ||| |||| Sbjct: 5470 gtagcacctagtat 5457
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 525 bits (265), Expect = e-146 Identities = 349/377 (92%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1428 gaccaacaaggggtagtacaggaatattcgcctgttgtccatcgactacgccttttggcc 1369 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1368 tgatcttaggccctgactcaccctccgtggacgaaccttgcagaggaacccttaggtttt 1309 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1308 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1249 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| | ||||| ||||||||||||||||||||||||||||| | Sbjct: 1248 cgtccacacctgctcacgctggcgcttctctctaaggcggaacgctcccctaccgatgta 1189 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 |||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 1188 ttttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcg 1129 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 1128 cttgatcagtgagctat 1112 Score = 224 bits (113), Expect = 3e-55 Identities = 149/160 (93%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1716 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1658 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1657 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 1598 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 ||| | ||||||||||||||||||| ||||||| |||||| Sbjct: 1597 ttgcttaaggtcgttcgagcttttcttgggagtgtggcat 1558 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 293 ||||||||| | | |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggacgttggctcgaggcattttctctacc 1497
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 523 bits (264), Expect = e-145 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 |||||||||| ||| |||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 983 tcttaccctgcaaa-gcagggacaccttacgttcttgaaccgataaccatctttcggcta 925 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 924 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 865 Query: 417 tccatcgactacgcctttcggcctga--tc----ttaggccctgactcaccctccgtgga 470 ||||||||||||||||||||| |||| || |||||||||||||||||||||||||| Sbjct: 864 tccatcgactacgcctttcgg-ctgacgtcacgtttaggccctgactcaccctccgtgga 806 Query: 471 cgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgt 530 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 805 cgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgc-- 748 Query: 531 tactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccct 590 ||||| | ||||||||||||||||||||||| ||| ||||| ||||| ||||| || Sbjct: 747 -actcacg-tgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctct 690 Query: 591 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgct 650 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 689 ctaaggcggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgct 630 Query: 651 tagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 629 tagccccgttcatcttcggcgcaagagcgctcgatcagtgagctat 584 Score = 274 bits (138), Expect = 4e-70 Identities = 181/194 (93%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1206 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 1148 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctc 1088 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||| | || ||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 1087 ttgctcaaagtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 1032 Query: 184 gtagcgcctggtat 197 |||||||||||||| Sbjct: 1031 gtagcgcctggtat 1018 Score = 186 bits (94), Expect = 7e-44 Identities = 148/163 (90%), Gaps = 5/163 (3%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 ||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1785 ggcaccccttcacccgaagttacggggctattttgccgtgttccttag-agagagttgtc 1727 Query: 64 tcgcgcccctaggtattct---ctacctacccacctgtgtcggtttcgggtacaggtacc 120 || ||||| ||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 1726 tcccgccca-aggcatccttatcttcctacccacctgtgtcggtttcgggtacaggtacc 1668 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1667 cttttgttgaaggtcgttcgagcttttcctgggagtatggcat 1625
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 517 bits (261), Expect = e-143 Identities = 342/369 (92%) Strand = Plus / Minus Query: 328 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 387 ||||| |||| ||||||||||||||||||||||||||| ||||||||||| | |||| || Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgggaccagca 1441 Query: 388 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1440 aggggtagtacaggaatattcgcctgttgtccatcgactacgcctttcggcctgatctta 1381 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1380 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1321 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 1320 tggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgcttcgtccaca 1261 Query: 568 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgaca 627 || ||| ||| | |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 1260 cctgctcacgctggtgcttctccctaaggcggaacgctcccctaccgatgtattttgaca 1201 Query: 628 tcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatca 687 |||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| ||||| Sbjct: 1200 tcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttgatca 1141 Query: 688 gtgagctat 696 ||||||||| Sbjct: 1140 gtgagctat 1132 Score = 202 bits (102), Expect = 1e-48 Identities = 144/157 (91%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1758 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcg 1700 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg 126 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | Sbjct: 1699 cgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcg 1640 Query: 127 ttgaaggtcgttcgagcttttcctgggagtatggcat 163 | ||||||||||||||||||| |||||| |||||| Sbjct: 1639 cttaaggtcgttcgagcttttctcgggagtgtggcat 1603
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 515 bits (260), Expect = e-143 Identities = 260/260 (100%) Strand = Plus / Minus Query: 437 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 748 Query: 497 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 688 Query: 557 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 628 Query: 617 gcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagg 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 gcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagg 568 Query: 677 gcgctcgatcagtgagctat 696 |||||||||||||||||||| Sbjct: 567 gcgctcgatcagtgagctat 548
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130269 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 130327 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130328 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130387 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130388 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130447 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130448 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130507 Query: 537 agccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||| Sbjct: 130508 agccgacattctcgcttccgcttcgtc 130534 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177 Query: 297 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 356 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 103176 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 103118 Query: 357 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 416 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103117 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103058 Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103057 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 102998 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102997 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 102938 Query: 537 agccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||| Sbjct: 102937 agccgacattctcgcttccgcttcgtc 102911 Score = 309 bits (156), Expect = 7e-81 Identities = 187/196 (95%), Gaps = 5/196 (2%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 130043 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 130101 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 130102 gtctcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacc 130161 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130162 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagc 130217 Query: 181 gccgtagcgcctggta 196 |||||||||||||||| Sbjct: 130218 gccgtagcgcctggta 130233 Score = 309 bits (156), Expect = 7e-81 Identities = 187/196 (95%), Gaps = 5/196 (2%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 103402 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 103344 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103343 gtctcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacc 103284 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103283 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagc 103228 Query: 181 gccgtagcgcctggta 196 |||||||||||||||| Sbjct: 103227 gccgtagcgcctggta 103212 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 130568 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgcttagccc 130627 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130628 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 130667 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 102877 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgcttagccc 102818 Query: 657 cgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||| ||||||| |||||||||||||||||||| Sbjct: 102817 cgttcatcttcggcgcaagagcgctcgatcagtgagctat 102778
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 507 bits (256), Expect = e-140 Identities = 280/287 (97%), Gaps = 1/287 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 286 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 228 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 168 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 167 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 108 Query: 181 gccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatact 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107 gccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatact 48 Query: 241 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttc 287 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 tcagcgctgcagcgcttggtactcggacctcggctcgaggcattttc 1
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 505 bits (255), Expect = e-140 Identities = 350/379 (92%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 114707 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 114765 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114766 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 114825 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 114826 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 114885 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 114886 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 114945 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 114946 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 115004 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| | Sbjct: 115005 tattttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagag 115064 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 115065 cgcttgatcagtgagctat 115083 Score = 505 bits (255), Expect = e-140 Identities = 350/379 (92%), Gaps = 2/379 (0%) Strand = Plus / Minus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 87413 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 87355 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 87354 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 87295 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 87294 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 87235 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 87234 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 87175 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 87174 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 87116 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| | Sbjct: 87115 tattttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagag 87056 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 87055 cgcttgatcagtgagctat 87037 Score = 224 bits (113), Expect = 3e-55 Identities = 149/160 (93%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 114457 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 114515 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 114516 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 114575 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 ||||| ||||||||||||||||||| ||||||| |||||| Sbjct: 114576 ttgtttaaggtcgttcgagcttttcttgggagtgtggcat 114615 Score = 224 bits (113), Expect = 3e-55 Identities = 149/160 (93%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 87663 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 87605 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 87604 tcgcgcccctaggtattctctacctacctacctgtgtcggtttcgggtacaggtacccac 87545 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 ||||| ||||||||||||||||||| ||||||| |||||| Sbjct: 87544 ttgtttaaggtcgttcgagcttttcttgggagtgtggcat 87505 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 gcttggtactcggacctcggctcgaggcattttctctacc 293 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 254 gcttggtactcggacctcggctcgaggcattttctctacc 293 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Plus Query: 443 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63490 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 63549 Query: 503 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63550 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 63609 Query: 563 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63610 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 63669 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63670 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 63729 Query: 683 gatcagtgagctat 696 |||||||||||||| Sbjct: 63730 gatcagtgagctat 63743
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Minus Query: 443 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 1120 Query: 503 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 1060 Query: 563 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 1000 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 940 Query: 683 gatcagtgagctat 696 |||||||||||||| Sbjct: 939 gatcagtgagctat 926
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 500 bits (252), Expect = e-138 Identities = 388/431 (90%), Gaps = 8/431 (1%) Strand = Plus / Minus Query: 272 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtcct 331 ||||||||| |||||||||||||||||||||||||||||| ||||| |||||| || || Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494 Query: 332 taaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 391 | |||| |||||||||||| |||||||||||||| ||||||||||| | ||||||||||| Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggg 1434 Query: 392 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 451 ||||||||| |||||| |||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1433 gtagtacagaaatattcacctgttgcccatcgactac-cgtttcggcctgatcttaggcc 1375 Query: 452 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 511 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 1374 ctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcattgga 1315 Query: 512 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 571 ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| | | Sbjct: 1314 ttctcaccaatgtttgcgttactcaagccgacattctcgcttccgtttcgtccaccgctg 1255 Query: 572 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg------cattttga 625 || || | ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1254 ctcgtgcagaggcttccctctaaggcggaacgctcccctaccgatgtatttttattttta 1195 Query: 626 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 685 ||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 1194 catcccacagcttcggcggatcgcttagccccgttaatcttcggcgcaagagcgctcgat 1135 Query: 686 cagtgagctat 696 |||| |||||| Sbjct: 1134 cagtaagctat 1124 Score = 178 bits (90), Expect = 2e-41 Identities = 117/125 (93%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||| ||||||||||||||||||||||||| |||||||| || Sbjct: 1763 ggcaccccttctcccgaagttatggggctattttgccgagttccttag-agagagttatc 1705 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1704 tcgcgcccctagatattctctacctacccacctgtgttggtttcgggtacaggtaccctt 1645 Query: 124 ttgtt 128 ||||| Sbjct: 1644 ttgtt 1640 Score = 65.9 bits (33), Expect = 2e-07 Identities = 58/66 (87%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 130 aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 189 |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| | Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570 Query: 190 cctggt 195 |||||| Sbjct: 1569 cctggt 1564
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 482 bits (243), Expect = e-133 Identities = 415/467 (88%), Gaps = 9/467 (1%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | |||||||| ||||||| || ||| ||||||||||||||||||||| Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033 Query: 297 tcttaccct----gaaaaa--gcagggtcaccttgtgtccttaaacctataaccatcttt 350 ||| ||||| |||||| ||| |||||||||| |||||| |||| |||||||| ||| Sbjct: 5034 tctgaccctccctgaaaaaaggcaaggtcaccttgcgtccttgaaccgataaccattttt 5093 Query: 351 cggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgac 410 ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||| || Sbjct: 5094 cggctaacctagcctcctccgtccctcgggaccaacaaaggatagtacaggaatattcac 5153 Query: 411 ctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgt-gg 469 ||||||||||||||| || | ||||||||||||||||||||||||||||||| |||| || Sbjct: 5154 ctgttgtccatcgacaac-cgtttcggcctgatcttaggccctgactcaccccccgttgg 5212 Query: 470 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 529 |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || Sbjct: 5213 acgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcg 5272 Query: 530 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 589 |||||||||||||||||||| ||||||||||||| || || ||| ||||| |||||| | Sbjct: 5273 ttactcaagccgacattctcacttccgcttcgtccacacctgctcgcgcgggtgcttctc 5332 Query: 590 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 649 ||| | ||||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 5333 tctgaaacggaacgctcccctaccgatgtttttagatatcccacagcttcggcagatcgc 5392 Query: 650 ttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||| ||||||||||||| | ||||| ||||||||||||| |||||| Sbjct: 5393 ttagtcccgttcatcttcggtgcaagagcgctcgatcagtaagctat 5439 Score = 254 bits (128), Expect = 3e-64 Identities = 149/155 (96%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4812 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 4870 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4871 tcgcgcccctaggtattttctacctacctacctgtgtcggtttcgggtacaggtaccctt 4930 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtat 158 ||||||||||||||||||||||||||||||||||| Sbjct: 4931 ttgttgaaggtcgttcgagcttttcctgggagtat 4965
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 472 bits (238), Expect = e-130 Identities = 337/370 (91%) Strand = Plus / Minus Query: 327 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 386 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 145425 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 145366 Query: 387 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 446 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 145365 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 145306 Query: 447 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 506 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 145305 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 145246 Query: 507 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 566 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145245 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 145186 Query: 567 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 626 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 145185 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 145126 Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |||| Sbjct: 145125 atcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttgatc 145066 Query: 687 agtgagctat 696 |||||||||| Sbjct: 145065 agtgagctat 145056 Score = 472 bits (238), Expect = e-130 Identities = 337/370 (91%) Strand = Plus / Plus Query: 327 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 386 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 87426 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 87485 Query: 387 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 446 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 87486 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 87545 Query: 447 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 506 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 87546 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 87605 Query: 507 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 566 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87606 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 87665 Query: 567 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 626 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 87666 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 87725 Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |||| Sbjct: 87726 atcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttgatc 87785 Query: 687 agtgagctat 696 |||||||||| Sbjct: 87786 agtgagctat 87795 Score = 224 bits (113), Expect = 3e-55 Identities = 171/189 (90%), Gaps = 5/189 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||||| Sbjct: 145666 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agaaagttgtc 145608 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145607 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccac 145548 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||| ||||||||||||||||||| ||||||| |||||| ||| |||||| ||||| Sbjct: 145547 ttgtcaaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgcc 145492 Query: 184 gtagcgcct 192 ||||||||| Sbjct: 145491 gtagcgcct 145483 Score = 224 bits (113), Expect = 3e-55 Identities = 171/189 (90%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||||| Sbjct: 87185 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agaaagttgtc 87243 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87244 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccac 87303 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 |||| ||||||||||||||||||| ||||||| |||||| ||| |||||| ||||| Sbjct: 87304 ttgtcaaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgcc 87359 Query: 184 gtagcgcct 192 ||||||||| Sbjct: 87360 gtagcgcct 87368 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 145503 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 145444 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 87348 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 87407
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 470 bits (237), Expect = e-129 Identities = 342/377 (90%) Strand = Plus / Plus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 127057 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 127058 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 127117 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127118 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 127177 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 127178 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 127237 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 ||||||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||| Sbjct: 127238 ctttgacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcg 127297 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 127298 cttgatcagtgagctat 127314 Score = 470 bits (237), Expect = e-129 Identities = 342/377 (90%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 96390 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 96389 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 96330 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96329 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 96270 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 96269 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 96210 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 ||||||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||| Sbjct: 96209 ctttgacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcg 96150 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 96149 cttgatcagtgagctat 96133 Score = 256 bits (129), Expect = 9e-65 Identities = 175/189 (92%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126690 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 126748 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126749 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccac 126808 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||| Sbjct: 126809 ttgttgaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgcc 126864 Query: 184 gtagcgcct 192 |||||||| Sbjct: 126865 atagcgcct 126873 Score = 256 bits (129), Expect = 9e-65 Identities = 175/189 (92%), Gaps = 5/189 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 96757 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 96699 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96698 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccac 96639 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 183 ||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||| Sbjct: 96638 ttgttgaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgcc 96583 Query: 184 gtagcgcct 192 |||||||| Sbjct: 96582 atagcgcct 96574 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 126853 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 126912 Query: 297 t 297 | Sbjct: 126913 t 126913 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 96594 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 96535 Query: 297 t 297 | Sbjct: 96534 t 96534
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 434 bits (219), Expect = e-118 Identities = 339/379 (89%) Strand = Plus / Minus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 ||||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgtatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 1205 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 1146 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 1145 cgcttgatcagtgagctat 1127 Score = 159 bits (80), Expect = 1e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1727 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcg 1669 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 121 ||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 1668 cgcccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 1614
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 430 bits (217), Expect = e-117 Identities = 226/229 (98%) Strand = Plus / Plus Query: 114 aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 173 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689 Query: 174 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 233 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749 Query: 234 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 809 Query: 294 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 342 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 858
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 426 bits (215), Expect = e-116 Identities = 338/379 (89%) Strand = Plus / Minus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 5538 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 5479 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 5478 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 5419 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 5418 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 5359 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5358 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 5299 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 5298 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 5239 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 5238 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 5179 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 5178 cgcttgatcagtgagctat 5160 Score = 159 bits (80), Expect = 1e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5760 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcg 5702 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 121 ||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 5701 cgcccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 5647
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 426 bits (215), Expect = e-116 Identities = 338/379 (89%) Strand = Plus / Minus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 1205 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 1146 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 1145 cgcttgatcagtgagctat 1127 Score = 159 bits (80), Expect = 1e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1727 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtctcg 1669 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 121 ||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 1668 cgcccctaggtattctctacctacctacctgtgtcggtttgaggtacaggcaccc 1614
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 412 bits (208), Expect = e-112 Identities = 335/373 (89%), Gaps = 7/373 (1%) Strand = Plus / Plus Query: 329 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 387 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 137767 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 137825 Query: 388 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 137826 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 137885 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 137886 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 137945 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 137946 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 138005 Query: 568 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 622 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 138006 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 138065 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| Sbjct: 138066 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 138125 Query: 683 gatcagtgagcta 695 ||||||||||||| Sbjct: 138126 gatcagtgagcta 138138 Score = 412 bits (208), Expect = e-112 Identities = 335/373 (89%), Gaps = 7/373 (1%) Strand = Plus / Minus Query: 329 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 387 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 84110 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 84052 Query: 388 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 84051 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 83992 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 83991 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 83932 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 83931 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 83872 Query: 568 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 622 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 83871 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 83812 Query: 623 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 682 |||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| Sbjct: 83811 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 83752 Query: 683 gatcagtgagcta 695 ||||||||||||| Sbjct: 83751 gatcagtgagcta 83739 Score = 218 bits (110), Expect = 2e-53 Identities = 168/186 (90%), Gaps = 5/186 (2%) Strand = Plus / Plus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || |||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 137514 ccccttctcccgaagttgcggggctattttgccgagttccttag-agagagttgtctcgc 137572 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgt 127 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || Sbjct: 137573 gcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgt 137632 Query: 128 tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 187 ||||||||||||| ||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 137633 tgaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtag 137688 Query: 188 cgcctg 193 |||||| Sbjct: 137689 cgcctg 137694 Score = 218 bits (110), Expect = 2e-53 Identities = 168/186 (90%), Gaps = 5/186 (2%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || |||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 84363 ccccttctcccgaagttgcggggctattttgccgagttccttag-agagagttgtctcgc 84305 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgt 127 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || Sbjct: 84304 gcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgt 84245 Query: 128 tgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtag 187 ||||||||||||| ||||||| ||||||| |||||| || |||||||||||||||| Sbjct: 84244 tgaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtag 84189 Query: 188 cgcctg 193 |||||| Sbjct: 84188 cgcctg 84183 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 295 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 295 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 412 bits (208), Expect = e-112 Identities = 332/371 (89%), Gaps = 3/371 (0%) Strand = Plus / Minus Query: 329 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 388 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 1481 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 1422 Query: 389 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 1421 ataagtggtacaggaatattaacctgttgtccatcgactgcgcctttcggcctcatctta 1362 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1361 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1302 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 1301 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 1242 Query: 568 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 625 | |||||||| |||||| | ||| || ||||||||||||||||||| |||||| Sbjct: 1241 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcttttttga 1182 Query: 626 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 685 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 1181 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 1122 Query: 686 cagtgagctat 696 ||||||||||| Sbjct: 1121 cagtgagctat 1111 Score = 161 bits (81), Expect = 4e-36 Identities = 108/116 (93%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1721 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1663 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 1662 atctcgcgcccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 1607 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 133 gtcgttcgagcttttcctgggagtatggcatcggttac 170 |||||||||||||||| |||||||||||||| |||||| Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gctcgaggcattttctctacc 293 ||||||||||||||||||||| Sbjct: 1518 gctcgaggcattttctctacc 1498
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 402 bits (203), Expect = e-109 Identities = 335/379 (88%) Strand = Plus / Minus Query: 318 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 377 ||||||||| ||||| |||| || ||||| ||||||| || ||||||| ||||||||||| Sbjct: 1500 tcaccttgtatccttgaaccgatcaccatttttcggccaatctagccttctccgtccctc 1441 Query: 378 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 437 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1440 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1381 Query: 438 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 497 ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct: 1380 cctaatcttaggccctgactaaccctccgtggacgaaccttgcggaggaacccttaggtt 1321 Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1320 ttcggggcattggattctcaccaatgtttccgttactcaagccgacattctcgcttccgc 1261 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||| || | | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1260 ttcgtccacatctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1201 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 ||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||| || | Sbjct: 1200 tattttagcatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcgagag 1141 Query: 678 cgctcgatcagtgagctat 696 |||| |||||||||||||| Sbjct: 1140 cgcttgatcagtgagctat 1122 Score = 157 bits (79), Expect = 6e-35 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1725 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttctc 1667 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 121 |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 1666 tcgcgcccctaggtattctctacctacctacctgtgtcggttttaggtacaggcaccc 1609
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 396 bits (200), Expect = e-107 Identities = 330/371 (88%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 329 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 388 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 123784 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 123843 Query: 389 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 123844 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 123903 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 123904 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 123963 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 123964 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 124023 Query: 568 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 625 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 124024 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 124083 Query: 626 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 685 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 124084 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 124143 Query: 686 cagtgagctat 696 ||||||||||| Sbjct: 124144 cagtgagctat 124154 Score = 396 bits (200), Expect = e-107 Identities = 330/371 (88%), Gaps = 3/371 (0%) Strand = Plus / Minus Query: 329 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 388 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 96082 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 96023 Query: 389 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 96022 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 95963 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 95962 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 95903 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 567 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 95902 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 95843 Query: 568 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 625 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 95842 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 95783 Query: 626 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 685 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 95782 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 95723 Query: 686 cagtgagctat 696 ||||||||||| Sbjct: 95722 cagtgagctat 95712 Score = 161 bits (81), Expect = 4e-36 Identities = 108/116 (93%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 123544 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 123602 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 123603 atctcgcgcccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 123658 Score = 161 bits (81), Expect = 4e-36 Identities = 108/116 (93%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 96322 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 96264 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 96263 atctcgcgcccctaggtattctctacctacctacctgtgtcggtttcaggtacagg 96208 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 133 gtcgttcgagcttttcctgggagtatggcatcggttac 170 |||||||||||||||| |||||||||||||| |||||| Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 133 gtcgttcgagcttttcctgggagtatggcatcggttac 170 |||||||||||||||| |||||||||||||| |||||| Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gctcgaggcattttctctacc 293 ||||||||||||||||||||| Sbjct: 123747 gctcgaggcattttctctacc 123767 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gctcgaggcattttctctacc 293 ||||||||||||||||||||| Sbjct: 96119 gctcgaggcattttctctacc 96099
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 394 bits (199), Expect = e-106 Identities = 199/199 (100%) Strand = Plus / Minus Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526961 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 33526902 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526901 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 33526842 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526841 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 33526782 Query: 678 cgctcgatcagtgagctat 696 ||||||||||||||||||| Sbjct: 33526781 cgctcgatcagtgagctat 33526763 Score = 147 bits (74), Expect = 6e-32 Identities = 77/78 (98%) Strand = Plus / Minus Query: 619 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 678 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 527960 attttgacatcccacagctttggcagatcgcttagccccgttcatcttcagcgcaagggc 527901 Query: 679 gctcgatcagtgagctat 696 |||||||||||||||||| Sbjct: 527900 gctcgatcagtgagctat 527883 Score = 141 bits (71), Expect = 4e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 467 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 526 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||| Sbjct: 1076634 tggacgaaccttgcggaggaaaccctgggttttcgaggcattggattcttaccgatgttt 1076693 Query: 527 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 586 | ||||||||||| ||||||||| | |||||||| |||| ||| |||| | ||| |||| Sbjct: 1076694 t-gttactcaagcagacattctcacatccgcttcatcga-ccctacttttgtggtggctt 1076751 Query: 587 ccctctaaggcggaacgctcccctacc 613 |||||||||| ||||| |||||||||| Sbjct: 1076752 ccctctaaggtggaacactcccctacc 1076778 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 9371911 atcgcttagccctgttcatcttcagcgcaagggtgctcgatc 9371952 Score = 58.0 bits (29), Expect = 4e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 529 gttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttcc 588 ||||||| |||| |||||||| ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 1076806 gttactccagccaacattctcacttccactttgtcgaccct-gcttttgcggttgcttcc 1076864 Query: 589 ctctaaggcggaacgctcccctaccgatg 617 | |||||| |||| ||| || ||||||| Sbjct: 1076865 ttttaaggcagaacactcaccaaccgatg 1076893 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 510 gattctcaccaatgttttcgttactcaa 537 |||||||||||||||||||||||||||| Sbjct: 33498146 gattctcaccaatgttttcgttactcaa 33498173 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ctacgcctttcggcctgatc 444 |||||||||||||||||||| Sbjct: 41814877 ctacgcctttcggcctgatc 41814858
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 394 bits (199), Expect = e-106 Identities = 199/199 (100%) Strand = Plus / Minus Query: 498 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72158 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 72099 Query: 558 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72098 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 72039 Query: 618 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72038 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 71979 Query: 678 cgctcgatcagtgagctat 696 ||||||||||||||||||| Sbjct: 71978 cgctcgatcagtgagctat 71960 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 510 gattctcaccaatgttttcgttactcaa 537 |||||||||||||||||||||||||||| Sbjct: 43343 gattctcaccaatgttttcgttactcaa 43370
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 377 bits (190), Expect = e-101 Identities = 313/352 (88%), Gaps = 4/352 (1%) Strand = Plus / Minus Query: 349 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 406 |||||||| | |||||||||||||||||| | || |||||||||||||||||||| | Sbjct: 1577 ttcggctagcttagcctcctccgtccctcttattgccgacaaggggtagtacaggaatct 1518 Query: 407 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 466 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1517 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1458 Query: 467 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 526 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1457 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1398 Query: 527 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 586 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1397 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttacactgatgctt 1338 Query: 587 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 644 | | | ||||||||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 1337 ctcccgtttgcggaacgctcccctaccgatgccctaatggacatcccacagcttcggcag 1278 Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1277 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctat 1226 Score = 174 bits (88), Expect = 3e-40 Identities = 112/119 (94%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 2 ggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttg 61 |||||||||||||| || ||||||||||| || |||||||||||||||| ||||||||| Sbjct: 1914 ggggcaccccttctcccgaagttacggggccatcttgccgagttccttag-agagagttg 1856 Query: 62 tctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1855 tctcgcgcccctaggtattctcaacctacccacctgtgtcggtttcgggtacaggtacc 1797
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 361 bits (182), Expect = 2e-96 Identities = 311/352 (88%), Gaps = 4/352 (1%) Strand = Plus / Minus Query: 349 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 406 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1460 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1401 Query: 407 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 466 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1400 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1341 Query: 467 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 526 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1281 Query: 527 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 586 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1280 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1221 Query: 587 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 644 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1220 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1161 Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1160 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctat 1109 Score = 182 bits (92), Expect = 1e-42 Identities = 113/119 (94%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| || |||||||||||||||| |||||||| Sbjct: 1777 gggggcaccccttctcccgaagttacggggccatcttgccgagttccttag-agagagtt 1719 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1718 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1660
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 361 bits (182), Expect = 2e-96 Identities = 311/352 (88%), Gaps = 4/352 (1%) Strand = Plus / Minus Query: 349 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 406 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1473 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1414 Query: 407 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 466 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1413 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1354 Query: 467 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 526 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1353 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1294 Query: 527 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 586 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1293 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1234 Query: 587 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 644 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1233 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1174 Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1173 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctat 1122 Score = 182 bits (92), Expect = 1e-42 Identities = 113/119 (94%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| || |||||||||||||||| |||||||| Sbjct: 1790 gggggcaccccttctcccgaagttacggggccatcttgccgagttccttag-agagagtt 1732 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1731 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 1673
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 359 bits (181), Expect = 8e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 516 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 1050 Query: 576 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 990 Query: 636 cttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagcta 695 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 cttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagcta 930 Query: 696 t 696 | Sbjct: 929 t 929
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 353 bits (178), Expect = 5e-94 Identities = 205/213 (96%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 814609 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 814551 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814550 gtctcgcacccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 814491 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 814490 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 814431 Query: 181 gccgtagcgcctggtatgagcctcgtggagaag 213 ||||||| ||||||||||||||||||||||||| Sbjct: 814430 gccgtagtgcctggtatgagcctcgtggagaag 814398 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 388 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 9725496 aggggtagtacaggtatattgacatgttgtccatcgactacgcctttcagcctgatctta 9725437 Query: 448 ggccctgactcaccctccgtggacgaaccttgcgg 482 ||||||||||||||||||||||||||||||||||| Sbjct: 9725436 ggccctgactcaccctccgtggacgaaccttgcgg 9725402 Score = 42.1 bits (21), Expect = 2.4 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 202 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 243 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 353 bits (178), Expect = 5e-94 Identities = 205/213 (96%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 23817 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 23759 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23758 gtctcgcacccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 23699 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23698 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 23639 Query: 181 gccgtagcgcctggtatgagcctcgtggagaag 213 ||||||| ||||||||||||||||||||||||| Sbjct: 23638 gccgtagtgcctggtatgagcctcgtggagaag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 353 bits (178), Expect = 5e-94 Identities = 205/213 (96%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 92740 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 92682 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92681 gtctcgcacccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 92622 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 92621 cctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagc 92562 Query: 181 gccgtagcgcctggtatgagcctcgtggagaag 213 ||||||| ||||||||||||||||||||||||| Sbjct: 92561 gccgtagtgcctggtatgagcctcgtggagaag 92529
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 349 bits (176), Expect = 8e-93 Identities = 233/252 (92%) Strand = Plus / Minus Query: 445 ttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgggg 504 ||||||| ||||||||||||||||||||||||||||||||||| |||| | |||| |||| Sbjct: 1372 ttaggccttgactcaccctccgtggacgaaccttgcggaggaacccttagtttttggggg 1313 Query: 505 cattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcg 564 |||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| Sbjct: 1312 cattagattctcaccaatgtttgcgttactcaagcggacattttcgcttccgcttcgtcc 1253 Query: 565 acccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttg 624 |||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1252 acccttgctggcgcggttgcttccctttaaggcggaacgctcccctacggatgcattttt 1193 Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1192 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 1133 Query: 685 tcagtgagctat 696 |||||||||||| Sbjct: 1132 tcagtgagctat 1121 Score = 301 bits (152), Expect = 2e-78 Identities = 186/196 (94%), Gaps = 5/196 (2%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1767 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1709 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1708 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1649 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagc 180 ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 1648 cttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagc 1593 Query: 181 gccgtagcgcctggta 196 |||||| ||||||||| Sbjct: 1592 gccgtatcgcctggta 1577 Score = 97.6 bits (49), Expect = 5e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | | ||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 1601 tacttcagcgccgtatcgcctggtactcgaacattggctcgaggcattttctctacccct 1542 Query: 297 tcttaccctgaaaaagcaggg 317 ||||||||||||||| ||||| Sbjct: 1541 tcttaccctgaaaaaccaggg 1521
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 345 bits (174), Expect = 1e-91 Identities = 329/378 (87%), Gaps = 2/378 (0%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 4519 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 4461 Query: 380 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 438 || || || | | ||||||||||||||||| ||| |||||||| | ||||||||||| Sbjct: 4460 tagttaataaagaatggtacaggaatattgaccagttatccatcgattgcgcctttcggc 4401 Query: 439 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 498 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 4400 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 4341 Query: 499 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 558 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 4340 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 4281 Query: 559 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 618 ||||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| Sbjct: 4280 tcgtccacatctgttttcactgatgcttcactctatagcagaacgctcccctaccgatgt 4221 Query: 619 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 678 | || ||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| || Sbjct: 4220 acttaaacatcccacagtttcggcaaatcgcttagtcccgttcatcttcggcgcaagagc 4161 Query: 679 gctcgatcagtgagctat 696 ||| |||||||||||||| Sbjct: 4160 gcttgatcagtgagctat 4143 Score = 165 bits (83), Expect = 2e-37 Identities = 104/110 (94%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 4743 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 4685 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4684 cgcccctaggtattctctacctacccacctgtgtcggttttgggtacagg 4635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 335 bits (169), Expect = 1e-88 Identities = 326/377 (86%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 ||||||| |||||||||| ||||||||| ||||| |||| |||||| ||||||||||| | Sbjct: 1484 accttgtatccttaaaccgataaccatcattcggataacttagccttctccgtccctcag 1425 Query: 380 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 439 || || | | ||||||||||||| ||| ||| |||||||| | ||||| |||||| Sbjct: 1424 agttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctgtcggcc 1365 Query: 440 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 499 | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1364 tcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1305 Query: 500 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1304 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1245 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| | Sbjct: 1244 cgtccacatctgttttcactggtgcttcactctatagcagaacgctcccctaccgatgta 1185 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 || ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| ||| Sbjct: 1184 -ttaaacatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagcg 1126 Query: 680 ctcgatcagtgagctat 696 || |||||||||||||| Sbjct: 1125 cttgatcagtgagctat 1109 Score = 165 bits (83), Expect = 2e-37 Identities = 104/110 (94%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1709 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 1651 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1650 cgcccctaggtattctctacctacccacctgtgtcggttttgggtacagg 1601
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 321 bits (162), Expect = 2e-84 Identities = 326/378 (86%), Gaps = 2/378 (0%) Strand = Plus / Minus Query: 320 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 379 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 1485 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 1427 Query: 380 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 438 || || || | | ||||||||||||| ||| ||| |||||||| | ||||||||||| Sbjct: 1426 tagttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctttcggc 1367 Query: 439 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 498 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1366 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1307 Query: 499 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 558 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 1306 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 1247 Query: 559 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 618 ||||| || | | |||| | | |||||| |||| || ||||||||||||||||||| Sbjct: 1246 tcgtccacatctgttttcactgatgcttcaatctatagcagaacgctcccctaccgatgt 1187 Query: 619 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 678 | || ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| || Sbjct: 1186 acttaaacatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagc 1127 Query: 679 gctcgatcagtgagctat 696 ||| |||||||||||||| Sbjct: 1126 gcttgatcagtgagctat 1109 Score = 165 bits (83), Expect = 2e-37 Identities = 104/110 (94%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1709 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 1651 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1650 cgcccctaggtattctctacctacccacctgtgtcggttttgggtacagg 1601
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 301 bits (152), Expect = 2e-78 Identities = 270/309 (87%), Gaps = 4/309 (1%) Strand = Plus / Minus Query: 392 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 451 ||||||||||||||| |||||||||||||| | | | || || || || | |||||| | Sbjct: 1376 gtagtacaggaatataaacctgttgtccatcaattgcaccatttggtctcaccttaggtc 1317 Query: 452 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 511 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 1316 ctgactcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattgga 1257 Query: 512 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 571 ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || | | Sbjct: 1256 ttctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccacatctg 1197 Query: 572 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatt----ttgaca 627 ||| ||| |||||| ||||||||||||||||||||||||||| || | |||| Sbjct: 1196 cttacgctaatgcttctatctaaggcggaacgctcccctaccgatatcttataatagaca 1137 Query: 628 tcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatca 687 |||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||||||| Sbjct: 1136 tcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcgatca 1077 Query: 688 gtgagctat 696 ||||||||| Sbjct: 1076 gtgagctat 1068 Score = 161 bits (81), Expect = 4e-36 Identities = 108/116 (93%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 ||||| |||||| || |||||||| |||||||||||||||||||||| |||||||| || Sbjct: 1642 ggcactccttcttcctaagttacggagctattttgccgagttccttag-agagagttatc 1584 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1583 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcaggtacaggtac 1528
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 297 bits (150), Expect = 3e-77 Identities = 294/342 (85%), Gaps = 10/342 (2%) Strand = Plus / Minus Query: 355 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 414 ||||||||||| ||||||||||| ||| | ||||||||||||||||||| |||| | Sbjct: 1490 taacctagcctactccgtccctcggta-----agggggtagtacaggaatattaacctat 1436 Query: 415 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 474 |||||||| |||| |||||| | |||||||||| ||||||||||||| |||||||||| Sbjct: 1435 tgtccatcaactaaacctttcagtatgatcttaggacctgactcaccctacgtggacgaa 1376 Query: 475 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 534 ||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1375 ccttgcgaaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1316 Query: 535 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 594 ||||||||||||||| |||| ||||| || ||| | ||| || | ||||||||| ||| Sbjct: 1315 caagccgacattctcacttctgcttcatccaccactgctcgtgcaggtgcttccctataa 1256 Query: 595 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 654 ||| ||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 1255 ggcagaacgctcccctaccgatg-----ttacatcccacagcttcggcggatcgcttatt 1201 Query: 655 cccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||| ||| ||||||| ||||||||||||| |||||| Sbjct: 1200 cccgttcatattcggcgcaagagcgctcgatcagttagctat 1159 Score = 174 bits (88), Expect = 3e-40 Identities = 112/119 (94%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1732 accccttctcccaaagttacggggctattttgccgagttccttag-agagagttgtcccg 1674 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1673 cgcccctaggtattctctacctacctacctgtgttggtttcgggtacaggtaccctttt 1615
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 278 bits (140), Expect = 2e-71 Identities = 165/171 (96%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1770 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1712 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1711 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1652 Query: 121 c-ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttac 170 | |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1651 ctttttgttgaaggtcgttcgagcttttcctgggagtatggcattggttac 1601 Score = 174 bits (88), Expect = 3e-40 Identities = 106/112 (94%) Strand = Plus / Minus Query: 585 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 644 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1243 ttccctctaagggggaacgctcccctaccgatgcatttttacatcccacagcttcggcag 1184 Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||| ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1183 atcgtttagccccgttcatcttgggcgcaagagcgctcgatcagtgagctat 1132 Score = 77.8 bits (39), Expect = 4e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 459 accctccgtggacgaacctt-gcggaggaaaccttgggttttcgggg-cattggattctc 516 |||||||||||||||||||| | ||||||| |||| | ||||||||| |||| ||||||| Sbjct: 1370 accctccgtggacgaacctttggggaggaacccttagtttttcgggggcattagattctc 1311 Query: 517 accaatgttttcgttactcaagc 539 |||| ||||| |||||||||||| Sbjct: 1310 accattgtttgcgttactcaagc 1288
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 9e-71 Identities = 266/308 (86%), Gaps = 4/308 (1%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 1416 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 1357 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 1356 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 1297 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 572 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 1296 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 1237 Query: 573 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 628 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 1236 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 1177 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 1176 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 1117 Query: 689 tgagctat 696 |||||||| Sbjct: 1116 tgagctat 1109 Score = 157 bits (79), Expect = 6e-35 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 2 ggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttg 61 |||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1718 ggggtaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtta 1660 Query: 62 tctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1659 tctcgcgccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 1602
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 276 bits (139), Expect = 9e-71 Identities = 266/308 (86%), Gaps = 4/308 (1%) Strand = Plus / Plus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 114246 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 114305 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 114306 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 114365 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 572 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 114366 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 114425 Query: 573 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 628 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 114426 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 114485 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 114486 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 114545 Query: 689 tgagctat 696 |||||||| Sbjct: 114546 tgagctat 114553 Score = 276 bits (139), Expect = 9e-71 Identities = 266/308 (86%), Gaps = 4/308 (1%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 87742 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 87683 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 87682 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 87623 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 572 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 87622 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 87563 Query: 573 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 628 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 87562 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 87503 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 87502 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 87443 Query: 689 tgagctat 696 |||||||| Sbjct: 87442 tgagctat 87435 Score = 157 bits (79), Expect = 6e-35 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 2 ggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttg 61 |||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 113945 ggggtaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtta 114003 Query: 62 tctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 114004 tctcgcgccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 114061 Score = 157 bits (79), Expect = 6e-35 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 2 ggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttg 61 |||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 88043 ggggtaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtta 87985 Query: 62 tctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 87984 tctcgcgccccttggtatactctacctacctacctgtgtcggtttcgggtacaggtac 87927
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 272 bits (137), Expect = 1e-69 Identities = 159/164 (96%), Gaps = 2/164 (1%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1787 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1729 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1728 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 1669 Query: 121 cttttgttgaaggtcgttcg-agcttttcctgggagtatggcat 163 |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1668 cttttgttgaaggtcgttcgaagcttttcctgggagtatggcat 1625 Score = 167 bits (84), Expect = 6e-38 Identities = 213/252 (84%), Gaps = 3/252 (1%) Strand = Plus / Minus Query: 448 ggccctgactcaccc-tccgtggacgaacc-ttgcggaggaaaccttgggtttt-cgggg 504 |||| |||||||||| || ||||||||||| ||| ||||||| | || | |||| |||| Sbjct: 1394 ggccttgactcacccctcggtggacgaacctttggggaggaacctttagtttttgggggg 1335 Query: 505 cattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcg 564 |||| ||||||||||||||||| ||||||| | || |||||||| | ||||| || ||| Sbjct: 1334 cattagattctcaccaatgtttgcgttactaaggcggacattctggtttccgtttggtcc 1275 Query: 565 acccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttg 624 |||| | | | || || |||||| ||||| ||||||||||||||| |||||||||| Sbjct: 1274 acccatgttggggggggtgtttccctttaagggggaacgctcccctacggatgcattttt 1215 Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| || Sbjct: 1214 acatcccacagcttcggcagatcgcttagccccgttcattttgggcgcaagagcgctgga 1155 Query: 685 tcagtgagctat 696 |||||||||||| Sbjct: 1154 tcagtgagctat 1143
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 270 bits (136), Expect = 6e-69 Identities = 158/163 (96%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1781 gggggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagtt 1723 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1722 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta-c 1664 Query: 121 cttttgttgaaggtcgttcgagcttttcctgggagtatggcat 163 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 cttttgttgaaggtcgttcgagcttttcctgggagtatggcat 1621 Score = 163 bits (82), Expect = 1e-36 Identities = 109/118 (92%) Strand = Plus / Minus Query: 579 ggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagctt 638 ||||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1255 ggttgtttccctttagggcggaacgctcccctaccgatgcatttttacatcccacagctt 1196 Query: 639 cggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||| |||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 1195 cggcagatcgtttagccccgttcattttgggcgcaagagcgctcgatcagtgagctat 1138 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 496 ttttcggggcattggattctcaccaatgttt 526 ||||||||||||| ||||||||||| ||||| Sbjct: 1341 ttttcggggcattagattctcaccattgttt 1311
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 266 bits (134), Expect = 9e-68 Identities = 155/161 (96%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 77233 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttgtc 77291 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77292 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctt 77351 Query: 124 ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 164 ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 77352 ttgtttaaggtcgttcgagcttttcttgggagtatggcatc 77392 Score = 167 bits (84), Expect = 6e-38 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 237 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 296 ||||||||||| | ||||| | ||||||| |||| |||| ||| |||||||||||||||| Sbjct: 77396 tacttcagcgccggagcgcctcgtactcgaaccttggctggagccattttctctacccct 77455 Query: 297 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 355 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 77456 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 77515 Query: 356 aacctagcctcctccgtccctccgtaccaaca 387 |||||||||||||||||||||| | ||||||| Sbjct: 77516 aacctagcctcctccgtccctcgggaccaaca 77547
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 266 bits (134), Expect = 9e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 392 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 451 |||||||||||||||| ||||||| ||||||||||||||| || ||| | | |||||| Sbjct: 1380 gtagtacaggaatattaacctgttatccatcgactacgccgtttggctttaccttaggtt 1321 Query: 452 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 511 |||||||||||| || ||||||||||| || ||||| |||||||||||||||||| |||| Sbjct: 1320 ctgactcaccctacgcggacgaaccttccgtaggaatccttgggttttcggggcactgga 1261 Query: 512 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 571 ||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| || || Sbjct: 1260 ttctcaccagtgtttgcgttactcaagccgacattctcacttccgctttgtccacattcg 1201 Query: 572 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg---cattttgacat 628 ||| ||| |||||| |||| |||||||||||||||||||||| |||| |||| Sbjct: 1200 cttacgctagtgcttcaacctaatgcggaacgctcccctaccgatgttatatttaaacat 1141 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 | ||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||||||| Sbjct: 1140 ctcacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcgatcag 1081 Query: 689 tgagctat 696 |||||||| Sbjct: 1080 tgagctat 1073 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||| | || |||||||||||||| |||||||||||||||| |||||||| || Sbjct: 1656 ggcaccccttatcccgaagttacggggctatattgccgagttccttag-agagagttatc 1598 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacag 115 |||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 1597 tcgcgcccctaggtattctcaacctacccacctgtgtcggttttaggtacag 1546
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 4e-67 Identities = 196/217 (90%) Strand = Plus / Minus Query: 398 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 457 |||||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1408 caggaatattaacctgatagccatcgactacgcctttcggccttatcttaggacctgact 1349 Query: 458 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 517 |||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 1348 caccctccgtggacgagccttgcggaggaacccttagggtttcggggcattggattctca 1289 Query: 518 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcg 577 |||||||||||| ||||||||||||||||||| ||||||||||||| || || ||||||| Sbjct: 1288 ccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacacctgctttcg 1229 Query: 578 cggttgcttccctctaaggcggaacgctcccctaccg 614 | | |||||| | ||| ||||||||||||||||||| Sbjct: 1228 ctgatgcttcaccctagagcggaacgctcccctaccg 1192 Score = 137 bits (69), Expect = 5e-29 Identities = 105/116 (90%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 2 ggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttg 61 |||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1684 ggggtaccccttcttccgaagttacggggccattttgccgagttccttag-agagagtta 1626 Query: 62 tctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1625 tctcgcgccccttggtattctctacctccccacctgtgtcggtttatggtacaggt 1570 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 |||| |||||||||| ||||||| ||||||| | ||| |||| || ||||| || ||||| Sbjct: 1167 cacaacttcggcagaccgcttagtcccgttcgttttcggcgcgagagcgcttgaccagtg 1108 Query: 691 agctat 696 |||||| Sbjct: 1107 agctat 1102 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 351 cggctaacctagcctcctccgtccctc 377 |||||||||||||||||| |||||||| Sbjct: 1455 cggctaacctagcctccttcgtccctc 1429
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 260 bits (131), Expect = 5e-66 Identities = 231/258 (89%), Gaps = 6/258 (2%) Strand = Plus / Minus Query: 445 ttaggccctgactcaccctccgtggacgaacctt-gcggaggaaaccttgggttttcggg 503 ||||||| |||||||||||||||||||||||||| | ||||||| | || |||||||||| Sbjct: 1401 ttaggccttgactcaccctccgtggacgaacctttggggaggaacctttaggttttcggg 1342 Query: 504 gcattggattctcaccaa-tgtttt-cgttactcaagccgacattctcgctt-ccgcttc 560 ||||| |||||||||||| |||||| ||||||||||||||||||||| | || ||| ||| Sbjct: 1341 gcattagattctcaccaaatgttttgcgttactcaagccgacattcttggtttccgtttc 1282 Query: 561 gtcgacccccgctttcgcg--gttgcttccctctaaggcggaacgctcccctaccgatgc 618 ||| | |||| |||||| | || |||| | ||||||||||||||||||||||||||| Sbjct: 1281 gtccaaccccttgttcgcgcgggtgtttccttttaaggcggaacgctcccctaccgatgc 1222 Query: 619 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 678 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1221 atttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagc 1162 Query: 679 gctcgatcagtgagctat 696 |||||||||||||||||| Sbjct: 1161 gctcgatcagtgagctat 1144 Score = 149 bits (75), Expect = 1e-32 Identities = 107/117 (91%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 9 cccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgcg 68 ||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||| || Sbjct: 1805 cccttctccccaagttactgggctattttgccgagttcctta-tagagagttgtctcccg 1747 Query: 69 cccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||| |||||||||||||||||||||||||||||||||| |||| | |||||||||| Sbjct: 1746 cccccaggtattctctacctacccacctgtgtcggtttctggtaaaagtaccctttt 1690
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 256 bits (129), Expect = 9e-65 Identities = 162/171 (94%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || |||||||||||||||||||||||||||||| |||||||| Sbjct: 1799 gggggcaccccttctcccgaagttacggggctattttgccgagttcctta-aagagagtt 1741 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1740 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtaaaggtaac 1681 Query: 121 cttttgttgaaggtcgttcg-agcttttcctgggagtatggcatcggttac 170 |||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1680 cttttgttgaaggtcgttcgaagcttttcctgggagtatggcatgggttac 1630 Score = 202 bits (102), Expect = 1e-48 Identities = 220/253 (86%), Gaps = 6/253 (2%) Strand = Plus / Minus Query: 445 ttaggccct-gactcaccc--tccgtggacgaacctt-gcggaggaaaccttgggttttc 500 ||||||||| ||||||||| |||||||||||||||| | ||||||| |||| |||||| Sbjct: 1399 ttaggcccttgactcaccccatccgtggacgaacctttggggaggaacccttaggttttg 1340 Query: 501 ggggcattggattctcaccaa-tgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||||||||||| ||||| ||||||||| |||||| | | | | | || Sbjct: 1339 ggggcattggattctcaccaaatgtttggtttactcaaggggacattttagat-cggttt 1281 Query: 560 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 619 |||| |||| ||| |||| ||||||||| ||||| ||||||||||||||| |||||| Sbjct: 1280 cgtccacccttgctggggcgggtgcttccctataagggggaacgctcccctacggatgca 1221 Query: 620 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 679 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1220 tttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcg 1161 Query: 680 ctcgatcagtgag 692 ||||||||||||| Sbjct: 1160 ctcgatcagtgag 1148
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1632 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1573 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1572 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1513 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 573 |||||||||||||||||||||||||||||||||||| ||||||||||||| || || || Sbjct: 1512 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacacctact 1453 Query: 574 ttcgcggttgcttccctctaaggcggaacgctcccctaccgat 616 |||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 1452 ttcgttgatgcttcaccctagagcggaacgctcccctaccgat 1410 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 1959 gggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttat 1901 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||| ||||||| ||| |||||||||||||| |||||||||| Sbjct: 1900 ctcgcgccccttggtatactctacccacctacctgtgtcggtttaaggtacaggta 1845 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 1329 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctccacc 1270 Query: 687 agtgagctat 696 |||||||||| Sbjct: 1269 agtgagctat 1260
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 5e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1451 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 1392 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 1391 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 1332 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1331 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 1282 Score = 153 bits (77), Expect = 9e-34 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1756 accccttctcccgaagttacggggccattttgccgagttccttag-agagagttatctcg 1698 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1697 cgccccttggtattctctacctacctacctgtgtcggtttcgggtacaggta 1646 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 ||||||||||||||| |||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 1194 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 1135 Query: 691 agctat 696 |||||| Sbjct: 1134 agctat 1129
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 5e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3220 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 3161 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 3160 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 3101 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 3100 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 3051 Score = 153 bits (77), Expect = 9e-34 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 3525 accccttctcccgaagttacggggccattttgccgagttccttag-agagagttatctcg 3467 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3466 cgccccttggtattctctacctacctacctgtgtcggtttcgggtacaggta 3415 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 ||||||||||||||| |||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 2963 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 2904 Query: 691 agctat 696 |||||| Sbjct: 2903 agctat 2898
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 246 bits (124), Expect = 8e-62 Identities = 241/279 (86%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 189405 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 189346 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 189345 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 189286 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 189285 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 189226 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 189225 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 189168 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||||||||| || ||||| ||||||||| ||| ||||| Sbjct: 189167 gcttcggcaaattacttagtcccgttcattttcggcgca 189129 Score = 246 bits (124), Expect = 8e-62 Identities = 241/279 (86%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 150962 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 150903 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 150902 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 150843 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 150842 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 150783 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 150782 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 150725 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||||||||| || ||||| ||||||||| ||| ||||| Sbjct: 150724 gcttcggcaaattacttagtcccgttcattttcggcgca 150686 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 151260 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 151202 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||| |||| |||||| |||| |||||||||||||| ||||||||| Sbjct: 151201 cgccccttagtatactctacttacctacctgtgtcggtttagggtacagg 151152 Score = 121 bits (61), Expect = 3e-24 Identities = 100/112 (89%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 189703 accccttctcccgaagttacggggttattttgccgagttccttag-agagagttatctcg 189645 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||| |||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 189644 cgccccttagtatactctacttacctacctgtgtcggtttagggtacaggta 189593
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1437 agtacaggaatattaacctgttttccatcgactacgcctttcggcctcgccttaggccct 1378 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1377 gactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1318 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1317 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1268 Score = 149 bits (75), Expect = 1e-32 Identities = 105/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 1772 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 1714 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| Sbjct: 1713 tcgcgcccctaggtatactctacccacctacctgtgtcggtttcgggtacaggt 1660 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 |||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | ||||| Sbjct: 1182 cacagcttcggcaggccgcttagtcccgttcattttcggcgcaagaacgctccaccagtg 1123 Query: 691 agctat 696 |||||| Sbjct: 1122 agctat 1117 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 gcggaacgctcccctaccgat 616 ||||||||||||||||||||| Sbjct: 1235 gcggaacgctcccctaccgat 1215
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 89 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 148 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 58140 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 58199 Query: 149 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 208 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 58200 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 58254 Query: 209 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 268 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58255 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 58314 Query: 269 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 328 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 58315 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 58373 Query: 329 ccttaaacc 337 ||||||||| Sbjct: 58374 ccttaaacc 58382 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 591 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 637 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 58745 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 58791
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 89 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 148 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 135351 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 135410 Query: 149 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 208 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 135411 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 135465 Query: 209 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 268 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135466 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 135525 Query: 269 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 328 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 135526 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 135584 Query: 329 ccttaaacc 337 ||||||||| Sbjct: 135585 ccttaaacc 135593 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 591 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 637 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 135956 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 136002
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 8e-59 Identities = 158/171 (92%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || Sbjct: 1602 tagtacaggaatattaacctgttttccatcgacgacgcctttcggcctggccttaggtcc 1543 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1542 tgactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1483 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1482 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1432 Score = 127 bits (64), Expect = 5e-26 Identities = 106/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1951 gggggtaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1893 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtac 119 ||||| |||||||||||| ||||||| ||| |||||||||||||| ||||||||||| Sbjct: 1892 atctcgagcccctaggtatactctacccacctacctgtgtcggtttaaggtacaggtac 1834 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 |||||||||||||||| ||||||| ||||||||| ||| ||||||| |||| | ||| Sbjct: 1247 cccacagcttcggcaggccgcttagtcccgttcattttcggcgcaagaacgctttaccag 1188 Query: 689 tgagctat 696 |||||||| Sbjct: 1187 tgagctat 1180
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 234 bits (118), Expect = 3e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 238 acttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 297 |||||| || || ||||| ||||||||| || | |||| |||| |||||||||||||||| Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292 Query: 298 cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaa 357 | ||| | ||||| |||| ||||||| ||||| |||| |||||||| |||| ||||| Sbjct: 2293 ttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttttctgctaa 2352 Query: 358 cctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgt 417 ||||||||||||||| |||| | ||||||||| |||||||| |||||||| |||| |||| Sbjct: 2353 cctagcctcctccgtacctcgggaccaacaagaggtagtactggaatattcacctcttgt 2412 Query: 418 ccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacct 477 ||||||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 2413 ccatcgactacacctttcggcctaatcttaggccctaactcaccctccgtggatgaacct 2472 Query: 478 tgcggaggaa 487 |||||||||| Sbjct: 2473 tgcggaggaa 2482 Score = 196 bits (99), Expect = 7e-47 Identities = 133/143 (93%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 21 agttacggggctattttgccgagttccttagnagagagttgtctcgcgcccctaggtatt 80 ||||||| | |||||||| |||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 2086 agttacgagactattttgtcgagttccttag-agagagttgcctcgcacccctaggtatt 2144 Query: 81 ctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg 140 ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2145 ctctacctacctacctgtgttagtttcgggtacaggtacccttttgttgaaggtcgttcg 2204 Query: 141 agcttttcctgggagtatggcat 163 |||||||||| |||||||||||| Sbjct: 2205 agcttttcctaggagtatggcat 2227 Score = 168 bits (85), Expect = 2e-38 Identities = 172/201 (85%) Strand = Plus / Plus Query: 496 ttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttcc 555 ||||| ||||||||||||||||||||||||| | ||| |||||||||||| ||||||| Sbjct: 2497 ttttcagggcattggattctcaccaatgtttgccttaaaaaagccgacattcccgcttcc 2556 Query: 556 gcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccga 615 || || || ||| | || || | |||||||||||||||||||||||||||||| ||| Sbjct: 2557 gcctcttccaccactactcgtgcaggtgcttccctctaaggcggaacgctcccctatcga 2616 Query: 616 tgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 675 ||||||||||||||||| |||||| ||||||||||||||| |||||||| | ||||| Sbjct: 2617 tgcattttgacatcccatagcttcaacagatcgcttagcccaattcatctttggtgcaag 2676 Query: 676 ggcgctcgatcagtgagctat 696 ||||||||| |||||||||| Sbjct: 2677 tgcgctcgattagtgagctat 2697
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 232 bits (117), Expect = 1e-57 Identities = 222/257 (86%), Gaps = 5/257 (1%) Strand = Plus / Minus Query: 417 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 476 |||||||||||||| |||| |||| |||||| |||||||||||||||| ||||||||| Sbjct: 2936 tccatcgactacgcttttcagcctcgccttaggtcctgactcaccctccgcggacgaacc 2877 Query: 477 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 536 || | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2876 ttccagaggaaaccttaggttttcggggcattggattctcaccaatgttttcgctactca 2817 Query: 537 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 596 ||||||||||||| |||| |||||||| || ||||||| ||| |||||| ||||| | Sbjct: 2816 agccgacattctcacttctgcttcgtccacacccgcttacgctaatgcttcaatctaatg 2757 Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 | |||||||||||||||||| ||| ||||||||||||||||| || |||||| || Sbjct: 2756 cagaacgctcccctaccgataaatt-----atcccacagcttcggcaaattgcttagtcc 2702 Query: 657 cgttcatcttcagcgca 673 ||||||| ||| ||||| Sbjct: 2701 cgttcattttcggcgca 2685 Score = 157 bits (79), Expect = 6e-35 Identities = 106/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| | Sbjct: 3260 gggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttat 3202 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 3201 ctcgcgccccttggtatactctacctacctacctgtgtcggtttcgggtacagg 3148
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 230 bits (116), Expect = 5e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 |||||||||||| || ||||||| |||||||||| |||| |||||| |||||||||| || Sbjct: 1823 tagtacaggaatgtt-acctgttatccatcgactgcgccattcggcttgatcttaggtcc 1765 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 |||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||||||| Sbjct: 1764 tgactcaccccacgtggacgaaccttgcgtaggaatccttaggttttcagggcattggat 1705 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 572 |||||||||||||| |||||||||||||||||||||| ||||||| ||||| || || || Sbjct: 1704 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcctcgtccacacctgc 1645 Query: 573 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 616 || ||| |||||| ||||| ||||||||||||||||||||| Sbjct: 1644 ttacgctaatgcttcgatctaacgcggaacgctcccctaccgat 1601 Score = 167 bits (84), Expect = 6e-38 Identities = 108/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||||||| |||||||||||||||| |||||||| || Sbjct: 2071 ggcaccccttctcccgaagttacggggctatcttgccgagttccttag-agagagttatc 2013 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2012 tcgcgcccctaggtattctctacctacccacctgtgtcggtttctggtacaggta 1958 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 690 ||||||||||||||| ||||||| ||||||||| ||| ||||||| |||||||||||||| Sbjct: 1579 cacagcttcggcagaccgcttagtcccgttcattttcggcgcaagagcgctcgatcagtg 1520 Query: 691 agctat 696 |||||| Sbjct: 1519 agctat 1514
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 230 bits (116), Expect = 5e-57 Identities = 239/279 (85%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 190328 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 190269 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 190268 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 190209 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 190208 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 190149 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 190148 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 190091 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||||||||| || ||||| ||||||||| ||| ||||| Sbjct: 190090 gcttcggcaaattacttagtcccgttcattttcggcgca 190052 Score = 230 bits (116), Expect = 5e-57 Identities = 239/279 (85%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 151755 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 151696 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 151695 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 151636 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 151635 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 151576 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 151575 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 151518 Query: 635 gcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||||||||| || ||||| ||||||||| ||| ||||| Sbjct: 151517 gcttcggcaaattacttagtcccgttcattttcggcgca 151479 Score = 133 bits (67), Expect = 9e-28 Identities = 100/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 190626 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 190568 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||| |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 190567 cgccccttagtatactctacctacctacctgtgtcggtttagggtacagg 190518 Score = 133 bits (67), Expect = 9e-28 Identities = 100/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 152053 accccttctcccgaagttacggggctattttgccgagttccttag-agagagttatctcg 151995 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||| |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 151994 cgccccttagtatactctacctacctacctgtgtcggtttagggtacagg 151945
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| | | ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3241 gtacgggaatattaatccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3182 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 3181 actcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattc 3122 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||||||||||||| ||||||||||||||||||| |||||| |||||| || | | ||| Sbjct: 3121 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtccacactcactt 3062 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatg 617 || |||||| | ||| | ||||||||||||||||||||| Sbjct: 3061 acgttagtgcttcaccctatgacggaacgctcccctaccgatg 3019 Score = 145 bits (73), Expect = 2e-31 Identities = 103/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 3574 gggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttat 3516 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtaca 114 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 3515 ctcgcgccccttagtattctctacctacccacctgtgtcggtttggggtaca 3464 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| ||||| || Sbjct: 2994 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcagaagcgcttga 2935 Query: 685 tcagtgagctat 696 ||||||||||| Sbjct: 2934 ccagtgagctat 2923
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 8e-56 Identities = 195/222 (87%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1494 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1435 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1434 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1375 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 573 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || Sbjct: 1374 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacccccact 1315 Query: 574 ttcgcggttgcttccctctaaggcggaacgctcccctaccga 615 | || | ||||| | | | |||||||||||||||||||| Sbjct: 1314 tccgtgaaagcttcacccgagagcggaacgctcccctaccga 1273 Score = 119 bits (60), Expect = 1e-23 Identities = 102/115 (88%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 1806 gggcgccccttctcccgaagttacggggctagtttgccgagttccttag-agagagttct 1748 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1747 ctcgcgccccttagtattctctactaacctacctgtgtcggtttcaggtacaggt 1693
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 226 bits (114), Expect = 8e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1407 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1348 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1347 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1288 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1287 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1238 Score = 133 bits (67), Expect = 9e-28 Identities = 103/114 (90%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||| |||||||||||||||||||| |||||||| || Sbjct: 1716 ggcaccccttctcccgaagttacggggttattttgccgagttccttag-agagagttatc 1658 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||| ||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 1657 tcgcgccccttggtatactctaccaacccacctgtgtcggtttacggtacaggt 1604 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||||| |||| |||| ||| ||| ||||||| ||||| | | Sbjct: 1171 atcccacagcttcggcagatcatttagtcccggacattttcggcgcaagaacgctccacc 1112 Query: 687 agtgagctat 696 |||||||||| Sbjct: 1111 agtgagctat 1102
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 226 bits (114), Expect = 8e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 26216 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 26157 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 26156 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 26097 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 26096 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 26047 Score = 133 bits (67), Expect = 9e-28 Identities = 103/114 (90%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||| |||||||||||||||||||| |||||||| || Sbjct: 26525 ggcaccccttctcccgaagttacggggttattttgccgagttccttag-agagagttatc 26467 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||| ||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 26466 tcgcgccccttggtatactctaccaacccacctgtgtcggtttacggtacaggt 26413 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||||| |||| |||| ||| ||| ||||||| ||||| | | Sbjct: 25980 atcccacagcttcggcagatcatttagtcccggacattttcggcgcaagaacgctccacc 25921 Query: 687 agtgagctat 696 |||||||||| Sbjct: 25920 agtgagctat 25911
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 224 bits (113), Expect = 3e-55 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Minus Query: 328 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 387 ||||| ||||||||||||| ||| || ||||||||||| ||||||||||| | | | Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccctcggga-----a 1443 Query: 388 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 447 ||||||||| ||||||||| |||| ||||||||| |||| |||||| | |||||||| Sbjct: 1442 gggggtagtataggaatattaacctattgtccatcaactaaacctttcagtatgatctta 1383 Query: 448 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 507 || ||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 1382 ggacctgactcaccctacgtggacgaaccttgcgaaggaacccttaggttttcggggcat 1323 Query: 508 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttc 560 ||||||||||||||||||| |||||||||||||||||||||| |||| ||||| Sbjct: 1322 tggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttc 1270 Score = 151 bits (76), Expect = 4e-33 Identities = 109/119 (91%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||| | ||||||||||||||||||||||| ||||||||||| || Sbjct: 1725 accccttctcccaaagttatgtggctattttgccgagttccttag-agagagttgtcccg 1667 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 1666 cgcccctaggtattctctacctacctacctgtgttggttttgggtacaggtaccctttt 1608 Score = 75.8 bits (38), Expect = 2e-10 Identities = 88/105 (83%), Gaps = 6/105 (5%) Strand = Plus / Minus Query: 592 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 651 |||||| |||||||||||||||||| | |||||||||||||||||| | |||||| Sbjct: 1228 taaggcagaacgctcccctaccgat------ttacatcccacagcttcggcgggtcgctt 1175 Query: 652 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 | ||| ||||| ||| ||||||| ||||||||||||| |||||| Sbjct: 1174 attcccattcatattcggcgcaagagcgctcgatcagttagctat 1130 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 137 ttcgagcttttcctgggagtatggcat 163 |||||||||||||||||||||| |||| Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 273 gctcgaggcattttctctaccccttc 298 ||||||||||||||||||||| |||| Sbjct: 1534 gctcgaggcattttctctacctcttc 1509
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Minus Query: 585 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 859 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 800 Query: 645 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 748
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 5e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1803 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1745 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1744 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 5e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1803 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1745 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1744 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 218 bits (110), Expect = 2e-53 Identities = 240/281 (85%), Gaps = 3/281 (1%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| |||||||||||||| | ||||||||||||||| || ||||| || Sbjct: 3096 tagtacaggaatattaacctgttgtccatcaattacgcctttcggcctcattttaggtcc 3037 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| ||||||||||||||| |||| | |||||| |||| ||||| ||||||||||||| Sbjct: 3036 tgactaaccctccgtggacgagccttccagaggaatccttaggtttccggggcattggat 2977 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 572 ||||||||||||||||| ||||||||||||||||||| |||| |||| ||| || || | Sbjct: 2976 tctcaccaatgttttcgctactcaagccgacattctcacttctgctttgtccacatccac 2917 Query: 573 tttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatccca 632 ||||| |||||| ||||| || ||||||||||||||||||||| | |||||||| Sbjct: 2916 tttcgttaatgcttcaatctaa-gcagaacgctcccctaccgatgca--taaacatccca 2860 Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgca 673 ||| ||||||| | ||||| ||||||||| ||| ||||| Sbjct: 2859 cagattcggcaagttacttagtcccgttcattttcggcgca 2819 Score = 129 bits (65), Expect = 1e-26 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 3392 accccttcttccgaagttacggggctattttgccgagttccttag-agagagttatctcg 3334 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||| |||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 3333 cgccccttagtatactctacttacctacctgtgtcggtttagggtacaggta 3282
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 7e-53 Identities = 154/169 (91%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| ||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 1894 gtacgggaatattaacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 1835 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 1834 actaaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattt 1775 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1774 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtc 1726 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| | Sbjct: 2221 gggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttct 2163 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtaca 114 ||||| ||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 2162 ctcgctccccttagtattctctacttacccacctgtgtcggttttgggtaca 2111 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||||| ||||| || Sbjct: 1626 acatcccacagcttcggcaaatagcttagtccctttcattttcggcgcaagagcgcttga 1567 Query: 685 tcagtgagctat 696 ||||||||||| Sbjct: 1566 ccagtgagctat 1555
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 212 bits (107), Expect = 1e-51 Identities = 256/303 (84%), Gaps = 2/303 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1412 gtacaggaattttgacctgttgtccatcgactacgcctttcggcatcatcttaggccctg 1353 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||||||||| ||||||||| |||| || ||||| |||| |||||||||||||| |||||| Sbjct: 1352 actcacccttcgtggacgagccttccgaaggaacccttaggttttcggggcatgggattc 1293 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 574 ||||| | |||| |||||||||||||||||||||| |||| | || ||| || | |||| Sbjct: 1292 tcacccacgtttgcgttactcaagccgacattctcacttctgttttgtccacacatgctt 1233 Query: 575 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 634 |||| ||||| |||| | ||||||||||||||| ||| | ||| |||| |||| Sbjct: 1232 tcgcttacgcttctaactaaaacagaacgctcccctacccatgtaattt-acatgccacg 1174 Query: 635 gcttcggcagatcgctt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagc 693 |||||||||||| ||| || ||| ||||| ||| |||| || ||||| ||||||||||| Sbjct: 1173 gcttcggcagattccttgagtccctttcattttcggcgccagagcgcttgatcagtgagc 1114 Query: 694 tat 696 ||| Sbjct: 1113 tat 1111 Score = 147 bits (74), Expect = 6e-32 Identities = 103/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 5 gcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtct 64 ||||||||||| || ||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1684 gcaccccttctcccgaagttacggggccattttgccgagttcctt-ggagagagttgtct 1626 Query: 65 cgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1625 cgcgcccctaggtattctctacctacctacctgtgtcggttttaggtacagg 1574
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 210 bits (106), Expect = 5e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 137909 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 137850 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 137849 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 137790 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 137789 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 137740 Score = 210 bits (106), Expect = 5e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 47635 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 47694 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 47695 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 47754 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 47755 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 47804 Score = 143 bits (72), Expect = 9e-31 Identities = 105/115 (91%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 138231 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 138173 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| |||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 138172 tcgcgccccttagtatactctacctacccacctgtgtcggtttagggtacaggta 138118 Score = 143 bits (72), Expect = 9e-31 Identities = 105/115 (91%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 47313 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 47371 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| |||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 47372 tcgcgccccttagtatactctacctacccacctgtgtcggtttagggtacaggta 47426 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||||||||||||||| |||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 137668 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaagaacgctctacc 137609 Query: 687 agtgagctat 696 |||||||||| Sbjct: 137608 agtgagctat 137599 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||||||||||||||| |||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 47876 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaagaacgctctacc 47935 Query: 687 agtgagctat 696 |||||||||| Sbjct: 47936 agtgagctat 47945
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 210 bits (106), Expect = 5e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| || Sbjct: 1559 agtacaggaatattaacctgttttccatcgactacgcctttcggcctggccttaggtccc 1500 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1499 gactaaccccccatggacgagcctagtggaggaagccttaggttttcggggcattggatt 1440 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1439 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1394 Score = 137 bits (69), Expect = 5e-29 Identities = 105/116 (90%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 1893 gggcgccccttctcccgaagttacggggccattttgccgagttccttag-agagagttat 1835 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1834 ctcgcgccccttggtatactctacctacctacctgtgtcggtttcgggtacgggta 1779 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | ||| Sbjct: 1314 cccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctctaccag 1255 Query: 689 tgagctat 696 |||||||| Sbjct: 1254 tgagctat 1247
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 210 bits (106), Expect = 5e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 1401 agtacaggaatattaacctgttttccatcaactacgcctttcggcctggctttaggtcct 1342 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| ||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1341 gactaaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1282 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 ||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1281 ctcaccaatgtttgcgttactcaagccgacattctcacttccgctt 1236 Score = 127 bits (64), Expect = 5e-26 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1729 accccttctcccgaagttacggggccattttgccgagttccttag-agagagttatctcg 1671 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||| ||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 1670 cgccccttggtatactctacctacctacctgtgtcggtttaaggtacaggt 1620 Score = 44.1 bits (22), Expect = 0.61 Identities = 58/70 (82%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||| ||||||||||| ||||||| ||||| || ||| ||||||| ||||| | | Sbjct: 1159 atcccatagcttcggcaggccgcttagtcccgtgaattttcggcgcaagaacgctccacc 1100 Query: 687 agtgagctat 696 |||||||||| Sbjct: 1099 agtgagctat 1090 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgat 616 |||||||||||||||||||| Sbjct: 1198 cggaacgctcccctaccgat 1179
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 5e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| |||||| |||||||||||||| |||| |||| |||||||||| Sbjct: 3164 agtacaggaatattaacctgtcatccatcgactacgcttttcagcctcgccttaggccct 3105 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 3104 gactcaccctccgtggacgaaccttccagaggaaaccttaggttttcggggcattggatt 3045 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 |||||||||||||||| |||| |||||||||||||| |||| |||| Sbjct: 3044 ctcaccaatgttttcgctacttaagccgacattctcacttctgctt 2999 Score = 143 bits (72), Expect = 9e-31 Identities = 102/111 (91%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| ||||| Sbjct: 3461 accccttcttccgaagttacggggccattttgccgagttccttag-agagagttatctcg 3403 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 3402 cgccccttggtatactctacctacctacctgtgtcggtttcgggtacaggt 3352 Score = 46.1 bits (23), Expect = 0.15 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Minus Query: 599 gaacgctcccctaccgatgcattttgacatcccacagcttcggca 643 ||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2960 gaacgctcccctaccgatg---ttaaacatcccacagcttcggca 2919
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 150948 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 151007 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 151008 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 151067 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 151068 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 151116 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 43255 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 43196 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 43195 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 43136 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43135 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 43087 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 150643 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 150701 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 150702 gccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 150751 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 43560 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 43502 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 43501 gccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 43452
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 1427 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 1368 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 1367 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 1308 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1307 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1259 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 1732 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 1674 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1673 gccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 1624
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 2e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||| || Sbjct: 1443 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctggtcttaggtcc 1384 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1383 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1324 Query: 513 tctcaccaatgttttcgttactcaagccgacattctc 549 ||||||||||||||||||||||||||||||||||||| Sbjct: 1323 tctcaccaatgttttcgttactcaagccgacattctc 1287 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1752 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1694 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1693 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 1638
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 3e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2034 agtacaggaatattaacctgttttccatcgactacgccattcggcctcgccttaggccct 1975 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1974 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1915 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1914 ctcaccaatgttttcgttactcaagccaacattctcacttccg 1872 Score = 117 bits (59), Expect = 5e-23 Identities = 98/110 (89%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 2524 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 2466 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||| ||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2465 gccccttggtatactctaccaacctacctgtgtcggtttcaggtacaggt 2416
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 3e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||| ||| Sbjct: 1480 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctaatcttaggtcct 1421 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 1420 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1361 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 | |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1360 cacaccaatgttttcgttactcaagccgacattctcacttccg 1318 Score = 121 bits (61), Expect = 3e-24 Identities = 103/116 (88%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1809 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1751 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 1750 ctcgcgccccttggtattctctaccaacctacctgtgtcggttttaggtacaggta 1695 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgat 616 |||||||||||||||||||| Sbjct: 1278 cggaacgctcccctaccgat 1259 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 631 cacagcttcggcagatcgcttagccccg 658 ||||||||||||||||| ||||| |||| Sbjct: 1212 cacagcttcggcagatcacttagtcccg 1185
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 3e-49 Identities = 157/175 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1670 agtacaggaatattcgcctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1611 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1610 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1551 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| Sbjct: 1550 ctcaccaatgttttcgttacttaagccgacattctcacttccgcttcgtccaccc 1496 Score = 127 bits (64), Expect = 5e-26 Identities = 103/115 (89%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 1984 gggcgccccttctcccgaagttacggggctagtttgccgagttccttag-agagagttat 1926 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||||||| |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1925 ctcgcgccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggt 1871
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||| Sbjct: 1581 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctggccttaggtcct 1522 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1521 gactcaccccccacggacgaacctggtggaggaacccttaggttttcggggcattggatt 1462 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 555 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1461 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1420 Score = 115 bits (58), Expect = 2e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 5 gcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtct 64 ||||||||||| || |||||||||| | ||||||||||||||||| |||||||| ||| Sbjct: 1983 gcaccccttcttccgaagttacggggtcaatttgccgagttccttag-agagagttctct 1925 Query: 65 cgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 1924 cgcgccccttggtattctctaccaacctacctgtgtcggtttaaggtacaggt 1872
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 198 bits (100), Expect = 2e-47 Identities = 243/288 (84%), Gaps = 2/288 (0%) Strand = Plus / Minus Query: 410 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 469 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1385 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1326 Query: 470 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 529 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1325 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1266 Query: 530 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 589 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1265 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1206 Query: 590 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 649 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 1205 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 1147 Query: 650 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 || || |||||||||||| |||| | ||||| |||||||||||||| Sbjct: 1146 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctat 1099 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 5 gcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtct 64 ||||| ||||| || ||||||| ||||||||||||||||||||||| |||| |||| || Sbjct: 1704 gcacctcttctcccgaagttacgaggctattttgccgagttccttag-agagggttgcct 1646 Query: 65 cgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1645 cgcgcccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 1594
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 198 bits (100), Expect = 2e-47 Identities = 243/288 (84%), Gaps = 2/288 (0%) Strand = Plus / Minus Query: 410 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 469 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1398 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1339 Query: 470 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 529 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1338 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1279 Query: 530 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 589 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1278 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1219 Query: 590 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 649 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 1218 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 1160 Query: 650 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 || || |||||||||||| |||| | ||||| |||||||||||||| Sbjct: 1159 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctat 1112 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 5 gcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtct 64 ||||| ||||| || ||||||| ||||||||||||||||||||||| |||| |||| || Sbjct: 1717 gcacctcttctcccgaagttacgaggctattttgccgagttccttag-agagggttgcct 1659 Query: 65 cgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1658 cgcgcccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 1607
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 198 bits (100), Expect = 2e-47 Identities = 243/288 (84%), Gaps = 2/288 (0%) Strand = Plus / Minus Query: 410 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 469 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 5972 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 5913 Query: 470 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 529 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 5912 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 5853 Query: 530 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 589 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 5852 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 5793 Query: 590 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 649 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 5792 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 5734 Query: 650 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 || || |||||||||||| |||| | ||||| |||||||||||||| Sbjct: 5733 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctat 5686 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 5 gcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtct 64 ||||| ||||| || ||||||| ||||||||||||||||||||||| |||| |||| || Sbjct: 6291 gcacctcttctcccgaagttacgaggctattttgccgagttccttag-agagggttgcct 6233 Query: 65 cgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 6232 cgcgcccctaggtattctctacccacccacctgtgtcggtctcgggtacagg 6181
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 7e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| ||||| || |||||||||||||| || Sbjct: 3599 tagtacaggaatattaacctgttttccatcgacgacgccgtttggcctgatcttaggtcc 3540 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 3539 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 3480 Query: 513 tctcaccaatgttttcgttactcaagccgac 543 ||||||||||||||||||||||||||||||| Sbjct: 3479 tctcaccaatgttttcgttactcaagccgac 3449 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 3907 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 3849 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3848 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 3793
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 7e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| || Sbjct: 1539 tagtacaggaatattcacctgtttgccatcgactgcgcctttcggcctggccttaggtcc 1480 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| ||| |||||| ||| ||| |||| |||| ||||||||||||||||||| Sbjct: 1479 tgactaacccaccgcggacgaccctaccggtggaacccttaggttttcggggcattggat 1420 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1419 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1369 Score = 109 bits (55), Expect = 1e-20 Identities = 103/117 (88%), Gaps = 3/117 (2%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1891 ggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttatc 1833 Query: 64 tcgcgcccctaggtattctcta--cctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| |||||||||| | ||| |||||||||||||| |||||||||| Sbjct: 1832 tcgcgcccctgagtattctctactcacacctacctgtgtcggtttatggtacaggta 1776
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 194 bits (98), Expect = 3e-46 Identities = 104/106 (98%) Strand = Plus / Minus Query: 123 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 182 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821 Query: 183 cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 228 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 194 bits (98), Expect = 3e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||| ||||| || ||| ||||||||||||||||||| |||||||| |||||| ||| Sbjct: 1028 agtacgggaattttaacccgttgtccatcgactacgccgttcggcctcgccttaggtcct 969 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||||||| |||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 968 gactaaccctccggggacgaacctggcggaggaaaccttagggtttcggggcattggatt 909 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||||||||||| || ||||||||||||||||||| |||||| |||||| Sbjct: 908 ctcaccaatgtttgcgctactcaagccgacattctcacttccgtttcgtc 859 Score = 145 bits (73), Expect = 2e-31 Identities = 106/116 (91%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 1328 gggcaccccttcttccgaagttacggggccattttgccgagttccttag-agagagttat 1270 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||| |||| || |||||||||||||||||||||||||| Sbjct: 1269 ctcgcgccccttggtattctcaacctccctacctgtgtcggtttcgggtacaggta 1214 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcat 663 ||||||||||||||| | ||||||||||||||||||| Sbjct: 792 atcccacagcttcggtacatcgcttagccccgttcat 756 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgat 616 |||||||||||||||||||| Sbjct: 824 cggaacgctcccctaccgat 805
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 194 bits (98), Expect = 3e-46 Identities = 146/162 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||| Sbjct: 1484 agtacaggaatattaacctgtttgccatcgactacgccgttcggcctcgccttaggtcct 1425 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || ||||||| ||||| ||||||| |||| ||||| |||||||||||||| Sbjct: 1424 gactcaccccccatggacgagccttgtggaggaacccttaggtttccggggcattggatt 1365 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 555 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1364 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1323 Score = 117 bits (59), Expect = 5e-23 Identities = 98/110 (89%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 1815 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 1757 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| |||||||||||||||| |||||||||||||| ||||||||| Sbjct: 1756 gccccttagtattctctacctacctacctgtgtcggtttatggtacaggt 1707 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccg 658 ||||||||||||||||||| ||||||| |||| Sbjct: 1185 atcccacagcttcggcagaccgcttagtcccg 1154
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 194 bits (98), Expect = 3e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||||||| |||||||| ||| |||||| ||| Sbjct: 1464 agtacaggaatattaacctgttctccatcgactacacctttcggtctggccttaggtcct 1405 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| ||||| | ||||||||||| | ||||| |||| |||||||||||||||||||| Sbjct: 1404 gactaacccttcatggacgaacctagtaaaggaacccttaggttttcggggcattggatt 1345 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1299 Score = 157 bits (79), Expect = 6e-35 Identities = 109/118 (92%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1810 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1752 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| Sbjct: 1751 atctcgcgcccctaggtatactctacccacctacctgtgtcggtttcgggtacaggta 1694 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 1192 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctccacc 1133 Query: 687 agtgagctat 696 |||||||||| Sbjct: 1132 agtgagctat 1123 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 gcggaacgctcccctaccgat 616 ||||||||||||||||||||| Sbjct: 1262 gcggaacgctcccctaccgat 1242
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 192 bits (97), Expect = 1e-45 Identities = 145/161 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542 Score = 109 bits (55), Expect = 1e-20 Identities = 97/110 (88%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 2006 ccccttcttccgaagttacggggccaatttgccgagttccttag-agagagttctctcgc 1948 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1947 gccccttagtattctctactaacctacctgtgtcggtttcaggtacaggt 1898
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 192 bits (97), Expect = 1e-45 Identities = 145/161 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542 Score = 109 bits (55), Expect = 1e-20 Identities = 97/110 (88%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 2006 ccccttcttccgaagttacggggccaatttgccgagttccttag-agagagttctctcgc 1948 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1947 gccccttagtattctctactaacctacctgtgtcggtttcaggtacaggt 1898
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 170075 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 170134 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 170135 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 170194 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 573 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 170195 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 170254 Query: 574 ttcgcggttgcttccctctaaggcggaacgctcccctacc 613 | || | ||||| | || |||||||||||||||||||| Sbjct: 170255 tccggaatagcttctccctcaggcggaacgctcccctacc 170294 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 122851 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 122792 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 122791 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 122732 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 573 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 122731 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 122672 Query: 574 ttcgcggttgcttccctctaaggcggaacgctcccctacc 613 | || | ||||| | || |||||||||||||||||||| Sbjct: 122671 tccggaatagcttctccctcaggcggaacgctcccctacc 122632 Score = 139 bits (70), Expect = 1e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 169728 gggggtaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 169786 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 169787 ctctcgagcccttaggtattctctacttacctacctgtgtcggtttcgggtacaggt 169843 Score = 139 bits (70), Expect = 1e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 123198 gggggtaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 123140 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123139 ctctcgagcccttaggtattctctacttacctacctgtgtcggtttcgggtacaggt 123083 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 632 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 691 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 170310 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 170369 Query: 692 gctat 696 ||||| Sbjct: 170370 gctat 170374 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 632 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 691 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 122616 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 122557 Query: 692 gctat 696 ||||| Sbjct: 122556 gctat 122552
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 154770 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 154829 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 154830 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 154889 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 154890 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 154933 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 79122 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 79063 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 79062 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 79003 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79002 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 78959 Score = 135 bits (68), Expect = 2e-28 Identities = 104/115 (90%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 154439 gggcgccccttcttccgaagttacggggctagtttgccgagttccttag-agagagttct 154497 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 154498 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 154552 Score = 135 bits (68), Expect = 2e-28 Identities = 104/115 (90%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 79453 gggcgccccttcttccgaagttacggggctagtttgccgagttccttag-agagagttct 79395 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 79394 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 79340 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 627 atcccacagcttcggcagatcgcttagccccg 658 |||||| ||||||||||||| |||||| |||| Sbjct: 155032 atcccatagcttcggcagattgcttagtcccg 155063 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccg 658 |||||| ||||||||||||| |||||| |||| Sbjct: 78860 atcccatagcttcggcagattgcttagtcccg 78829
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 190 bits (96), Expect = 4e-45 Identities = 144/160 (90%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || | Sbjct: 1666872 gtacaggaatattgacctgttatccatcgactacgcctttcggcctgaccttaggaccag 1666813 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1666812 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1666753 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1666752 tcacccatgttttcgctactcaagccgacattctcacttc 1666713 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||| ||||||| || ||||||||| | ||||||||||||||||||| |||||||| || Sbjct: 1667173 ggcatcccttctcccgaagttacgggaccattttgccgagttccttag-agagagttatc 1667115 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 1667114 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 1667065 Score = 40.1 bits (20), Expect = 9.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||||| ||||| ||||| Sbjct: 1666621 cttagccccgttcattttcggcgcaggatcgctcgaccagtgggctat 1666574
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 190 bits (96), Expect = 4e-45 Identities = 301/367 (82%), Gaps = 3/367 (0%) Strand = Plus / Plus Query: 330 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 389 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 17574 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 17633 Query: 390 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 449 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 17634 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 17692 Query: 450 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 509 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 17693 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 17752 Query: 510 gattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccc 569 |||||||||||||||||||| ||||||||| |||||||| |||| | | ||| || || Sbjct: 17753 gattctcaccaatgttttcgctactcaagctaacattctcacttctaccttgtccacgcc 17812 Query: 570 cgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatc 629 ||||| ||| ||||| |||| | ||||||||||||||||||| |||| ||||| Sbjct: 17813 cgcttccgctaacgcttcaaactaatgtagaacgctcccctaccgatg--ttttaacatc 17870 Query: 630 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 689 |||||||||||| || ||||| ||| ||||| ||| ||||| | || ||||| |||| Sbjct: 17871 ttacagcttcggcaaattacttagtcccattcattttcggcgcaggagcactcgaacagt 17930 Query: 690 gagctat 696 ||||||| Sbjct: 17931 gagctat 17937 Score = 190 bits (96), Expect = 4e-45 Identities = 301/367 (82%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 330 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 389 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 3292 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 3233 Query: 390 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 449 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 3232 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 3174 Query: 450 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 509 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 3173 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 3114 Query: 510 gattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccc 569 |||||||||||||||||||| ||||||||| |||||||| |||| | | ||| || || Sbjct: 3113 gattctcaccaatgttttcgctactcaagctaacattctcacttctaccttgtccacgcc 3054 Query: 570 cgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatc 629 ||||| ||| ||||| |||| | ||||||||||||||||||| |||| ||||| Sbjct: 3053 cgcttccgctaacgcttcaaactaatgtagaacgctcccctaccgatg--ttttaacatc 2996 Query: 630 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 689 |||||||||||| || ||||| ||| ||||| ||| ||||| | || ||||| |||| Sbjct: 2995 ttacagcttcggcaaattacttagtcccattcattttcggcgcaggagcactcgaacagt 2936 Query: 690 gagctat 696 ||||||| Sbjct: 2935 gagctat 2929 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||| ||||| || ||||||| ||| ||||||||||||||||||| |||||||| | Sbjct: 17336 gggcacctcttctcccgaagttacgaggccattttgccgagttccttag-agagagttat 17394 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 17395 ctcgcgccccttagtattctctacttacccacctgtgtcggtttagggtacaggta 17450 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||| ||||| || ||||||| ||| ||||||||||||||||||| |||||||| | Sbjct: 3530 gggcacctcttctcccgaagttacgaggccattttgccgagttccttag-agagagttat 3472 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 3471 ctcgcgccccttagtattctctacttacccacctgtgtcggtttagggtacaggta 3416
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1587 agtacaggaatataaacctgtttgccatcgactacgcctgtcggcctcgccttaggtcct 1528 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||| | ||||||||||||| ||||| |||| |||||||||||||||||||| Sbjct: 1527 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcggggcattggatt 1468 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 557 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1467 ctcaccaatgttttcgttactcaagccgacattctcgctcccgc 1424 Score = 111 bits (56), Expect = 3e-21 Identities = 101/115 (87%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1921 gggcgccccttcttccgaagttacggggccaatttgccgagttccttag-agagagttct 1863 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 || |||||||| |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1862 cttgcgccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggt 1808
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 1442 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 1383 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 1382 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 1323 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 573 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 1322 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 1263 Query: 574 ttcgcggttgcttccctctaaggcggaacgctcccctacc 613 | || | ||||| | || |||||||||||||||||||| Sbjct: 1262 tccggaatagcttctccctcaggcggaacgctcccctacc 1223 Score = 139 bits (70), Expect = 1e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1789 gggggtaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1731 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 1730 ctctcgagcccttaggtattctctacttacctacctgtgtcggtttcgggtacaggt 1674 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 632 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 691 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 1207 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 1148 Query: 692 gctat 696 ||||| Sbjct: 1147 gctat 1143
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 188 bits (95), Expect = 2e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 7149 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 7090 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 7089 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 7030 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 7029 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 6983 Score = 127 bits (64), Expect = 5e-26 Identities = 103/115 (89%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||| ||||||||||||||||||| |||||||| || Sbjct: 7465 ggcaccccttcttccgaagttacggggtcattttgccgagttccttag-agagagttatc 7407 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| |||| |||||||||||||||||||||||||| |||||||||| Sbjct: 7406 tcgcgccccttagtatactctacctacccacctgtgtcggtttatggtacaggta 7352
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 188 bits (95), Expect = 2e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 193281 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 193222 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 193221 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 193162 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 193161 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 193107 Score = 188 bits (95), Expect = 2e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 143501 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 143560 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 143561 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 143620 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 143621 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 143675 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 6 caccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctc 65 |||||||||| || ||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 193589 caccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatctc 193531 Query: 66 gcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||| |||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 193530 gcgtcccttagtattctctacctacctacctgtgtcggtttcgggtacaggt 193479 Score = 137 bits (69), Expect = 5e-29 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 6 caccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctc 65 |||||||||| || ||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 143193 caccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatctc 143251 Query: 66 gcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||| |||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 143252 gcgtcccttagtattctctacctacctacctgtgtcggtttcgggtacaggt 143303 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||||||||||||||| ||||||| ||||||||| ||| |||||| ||||| | | Sbjct: 193044 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaaaaacgctctacc 192985 Query: 687 agtgagctat 696 |||||||||| Sbjct: 192984 agtgagctat 192975 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 |||||||||||||||||| ||||||| ||||||||| ||| |||||| ||||| | | Sbjct: 143738 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaaaaacgctctacc 143797 Query: 687 agtgagctat 696 |||||||||| Sbjct: 143798 agtgagctat 143807
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 188 bits (95), Expect = 2e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 1500 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 1441 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 1440 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 1381 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 559 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1380 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1334 Score = 127 bits (64), Expect = 5e-26 Identities = 103/115 (89%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||| ||||||||||||||||||| |||||||| || Sbjct: 1816 ggcaccccttcttccgaagttacggggtcattttgccgagttccttag-agagagttatc 1758 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| |||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1757 tcgcgccccttagtatactctacctacccacctgtgtcggtttatggtacaggta 1703
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Minus Query: 227 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 286 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834 Query: 287 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 329 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 15791
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 186 bits (94), Expect = 7e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2896 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 2837 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 2836 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 2777 Query: 514 ctcaccaatgttttcgttactcaagccgac 543 |||||||||||||||||||||||||||||| Sbjct: 2776 ctcaccaatgttttcgttactcaagccgac 2747 Score = 109 bits (55), Expect = 1e-20 Identities = 97/110 (88%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 3200 ccccttcttccgaagttacggggccaatttgccgagttccttag-agagagttctctcgc 3142 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 3141 gccccttagtattctctactaacctacctgtgtcggtttcaggtacaggt 3092
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 186 bits (94), Expect = 7e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||| |||||||||||| |||||||||||||||||||||||||||| |||||| || Sbjct: 2333412 agtactggaatattgaccagttgtccatcgactacgcctttcggcctcgccttaggtccc 2333471 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| ||||| || |||||| |||| || ||||| ||||||| ||||||||||||||||| Sbjct: 2333472 gactaacccttcgcggacgagccttccgaaggaacccttggggtttcggggcattggatt 2333531 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||||| ||||||||||| ||||||| |||| |||||||| Sbjct: 2333532 ctcaccaatgttttcgctactcaagccggcattctcacttctgcttcgtc 2333581 Score = 135 bits (68), Expect = 2e-28 Identities = 104/115 (90%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 2333113 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 2333171 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 |||||||||| ||||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 2333172 tcgcgccccttggtatactctacccccccacctgtgtcggtttcgggtacgggta 2333226 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 630 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 689 |||||||||||| | ||| ||||| ||||||||| ||| ||||| | |||| || |||| Sbjct: 2333647 ccacagcttcggtacatcacttagtcccgttcattttcggcgcaggaacgcttgaccagt 2333706 Query: 690 gagctat 696 ||||||| Sbjct: 2333707 gagctat 2333713
>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2 Length = 655 Score = 186 bits (94), Expect = 7e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 150 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 91 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 90 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 31 Query: 514 ctcaccaatgttttcgttactcaagccgac 543 |||||||||||||||||||||||||||||| Sbjct: 30 ctcaccaatgttttcgttactcaagccgac 1 Score = 109 bits (55), Expect = 1e-20 Identities = 97/110 (88%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 454 ccccttcttccgaagttacggggccaatttgccgagttccttag-agagagttctctcgc 396 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 395 gccccttagtattctctactaacctacctgtgtcggtttcaggtacaggt 346
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 3149 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 3090 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 3089 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 3030 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 3029 tcacctatattttcgttactcaagccgacattctcacttctgcttcgtc 2981 Score = 101 bits (51), Expect = 3e-18 Identities = 90/102 (88%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 ||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| || Sbjct: 3449 ggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttatc 3391 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtt 105 |||||||||| |||| ||||||||||||||||||||||||| Sbjct: 3390 tcgcgccccttagtatactctacctacccacctgtgtcggtt 3349
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293 Score = 125 bits (63), Expect = 2e-25 Identities = 102/114 (89%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1771 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1713 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 1712 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1659
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1659901 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1659842 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1659841 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1659782 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1659781 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1659733 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1048843 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1048902 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1048903 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1048962 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1048963 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1049011 Score = 101 bits (51), Expect = 3e-18 Identities = 99/114 (86%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| Sbjct: 1660203 gggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttac 1660145 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 1660144 ctcgcgccccttggtatactctaccgtcccacctgtgtcggtttagggtacagg 1660091 Score = 101 bits (51), Expect = 3e-18 Identities = 99/114 (86%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| Sbjct: 1048541 gggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttac 1048599 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 1048600 ctcgcgccccttggtatactctaccgtcccacctgtgtcggtttagggtacagg 1048653 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||| || ||||||||||| Sbjct: 1659648 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctat 1659601 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||| || ||||||||||| Sbjct: 1049096 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctat 1049143
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 184 bits (93), Expect = 3e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 |||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1669 agtacaggaatattaacctgttttccatcgactacgccgctcggcctcgccttaggtcct 1610 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1609 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1550 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttc 554 |||||||||||||||||||||||| || ||||||||||||| Sbjct: 1549 ctcaccaatgttttcgttactcaaaccaacattctcgcttc 1509 Score = 117 bits (59), Expect = 5e-23 Identities = 98/110 (89%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 2020 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 1962 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||| ||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1961 gccccttggtatactctaccaacctacctgtgtcggtttcaggtacaggt 1912
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1663 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1604 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1603 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1544 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1543 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1495 Score = 101 bits (51), Expect = 3e-18 Identities = 99/114 (86%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| Sbjct: 1965 gggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttac 1907 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 1906 ctcgcgccccttggtatactctaccgtcccacctgtgtcggtttagggtacagg 1853 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||| || ||||||||||| Sbjct: 1410 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctat 1363
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293 Score = 125 bits (63), Expect = 2e-25 Identities = 102/114 (89%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1771 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1713 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 1712 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacagg 1659
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 2656885 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 2656944 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 2656945 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 2657004 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 2657005 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 2657053 Score = 184 bits (93), Expect = 3e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 572036 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 571977 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 571976 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 571917 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 571916 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 571868 Score = 101 bits (51), Expect = 3e-18 Identities = 99/114 (86%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| Sbjct: 2656583 gggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttac 2656641 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 2656642 ctcgcgccccttggtatactctaccgtcccacctgtgtcggtttagggtacagg 2656695 Score = 101 bits (51), Expect = 3e-18 Identities = 99/114 (86%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||||| |||||| || |||||||| | ||||||||||||||||||| |||||||| Sbjct: 572338 gggcactccttctcccgaagttacggagtcattttgccgagttccttag-agagagttac 572280 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 572279 ctcgcgccccttggtatactctaccgtcccacctgtgtcggtttagggtacagg 572226 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||| || ||||||||||| Sbjct: 2657138 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctat 2657185 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 649 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 ||||||||||||||| ||| ||||| | ||||| || ||||||||||| Sbjct: 571783 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctat 571736
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 182 bits (92), Expect = 1e-42 Identities = 143/160 (89%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| ||| |||||||||||||||||||||||||||| |||||| || | Sbjct: 1025 gtacgggaatattaacccgttgtccatcgactacgcctttcggcctcgccttaggtcccg 966 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| |||||||| |||| || |||||||||||||||||| Sbjct: 965 actaaccctccgcggacgagccttccggaggaacccttagggtttcggggcattggattc 906 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 905 tcaccaatgttttcgctactcaagccgacattctcacttc 866 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | Sbjct: 1326 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttacc 1268 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 1267 tcgcgccccttggtatactctacctccctacctgtgtcggtttcgggtac 1218
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 689 tgagctat 696 | |||||| Sbjct: 1112 ttagctat 1105 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1675 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1617 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1616 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 129 bits (65), Expect = 1e-26 Identities = 103/115 (89%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 121 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccc 1563
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 689 tgagctat 696 | |||||| Sbjct: 1112 ttagctat 1105 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1675 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1617 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1616 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 689 tgagctat 696 | |||||| Sbjct: 1112 ttagctat 1105 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1675 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1617 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1616 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| |||| ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaacctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| | || ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacctctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 182 bits (92), Expect = 1e-42 Identities = 254/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1675 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1617 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1616 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 182 bits (92), Expect = 1e-42 Identities = 146/164 (89%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| || Sbjct: 1469 tagtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttagggcc 1410 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 |||||||||| || ||||||||||| | ||||||| || ||||||||||||||||||| Sbjct: 1409 tgactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggat 1350 Query: 513 tctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 ||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1349 tctaaccaatgttttcgttactcaagccgacattctcacttccg 1306 Score = 121 bits (61), Expect = 3e-24 Identities = 103/116 (88%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 1813 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 1755 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 1754 ctcgcgccccttggtattctctaccaacctacctgtgtcggttttaggtacaggta 1699 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 656 ||||||||||||||||||| ||||| | || |||||||||||||| || ||||| || Sbjct: 1265 cggaacgctcccctaccgacatatttttatgtctcacagcttcggcaggtcacttagtcc 1206 Query: 657 cg 658 || Sbjct: 1205 cg 1204
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||| || ||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 3003 agtacaggaatcttaacctgttttccatcgactacgcctttcggccttgccttaggtcct 2944 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 2943 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 2884 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 || |||||||||||||||||||||||| |||||||| |||||| Sbjct: 2883 cttaccaatgttttcgttactcaagccaacattctcacttccg 2841 Score = 111 bits (56), Expect = 3e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || |||||||||| || ||||||||||||||||| |||||||| || Sbjct: 3325 ggcaccccttctaccgaagttacggggttaatttgccgagttccttag-agagagttctc 3267 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtaca 114 |||||||||| |||| ||||||| ||| ||||||||||||||| |||||| Sbjct: 3266 tcgcgccccttagtatactctaccaacctacctgtgtcggtttcaggtaca 3216 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgat 616 |||||||||||||||||||| Sbjct: 2800 cggaacgctcccctaccgat 2781
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 180 bits (91), Expect = 4e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||| || | |||||||| ||||||| ||||||||||| ||| ||||||| ||| Sbjct: 1873 agtacaggattagtaacctgttgcccatcgaatacgcctttcgaccttttcttaggacct 1814 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1813 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1754 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgct 552 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 ctcaccaatgttttcgttactcaagccgacattctcgct 1715 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| | ||||||||||||||||| |||||||| |||||| Sbjct: 2170 ccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttctctcgc 2112 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2111 gccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggt 2062
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 180 bits (91), Expect = 4e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 2875 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 2816 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 2815 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 2756 Query: 513 tctcaccaatgttttcgttactcaagccgac 543 ||||||||||||||||||||||||||||||| Sbjct: 2755 tctcaccaatgttttcgttactcaagccgac 2725 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 3182 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 3124 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3123 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 3068
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Plus Query: 360 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 419 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 38992 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 39051 Query: 420 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 479 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 39052 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 39111 Query: 480 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 539 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 39112 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 39171 Query: 540 cgacattctcgcttc 554 |||||||||| |||| Sbjct: 39172 cgacattctcacttc 39186 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Minus Query: 360 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 419 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 20408 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 20349 Query: 420 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 479 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 20348 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 20289 Query: 480 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 539 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20288 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 20229 Query: 540 cgacattctcgcttc 554 |||||||||| |||| Sbjct: 20228 cgacattctcacttc 20214 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/86 (89%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 33 attttgccgagttccttagnagagagttgtctcgcgcccctaggtattctctacctaccc 92 ||||||||||||||||||| |||||||| |||||||||||| |||| ||||| ||||| Sbjct: 38755 attttgccgagttccttag-agagagttatctcgcgccccttagtatattctacttaccc 38813 Query: 93 acctgtgtcggtttcgggtacaggta 118 |||||||||||||| |||||||||| Sbjct: 38814 acctgtgtcggtttgtggtacaggta 38839 Score = 91.7 bits (46), Expect = 3e-15 Identities = 77/86 (89%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 33 attttgccgagttccttagnagagagttgtctcgcgcccctaggtattctctacctaccc 92 ||||||||||||||||||| |||||||| |||||||||||| |||| ||||| ||||| Sbjct: 20645 attttgccgagttccttag-agagagttatctcgcgccccttagtatattctacttaccc 20587 Query: 93 acctgtgtcggtttcgggtacaggta 118 |||||||||||||| |||||||||| Sbjct: 20586 acctgtgtcggtttgtggtacaggta 20561 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||| || ||||| ||| |||| ||| ||||| | ||||| |||| Sbjct: 39254 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 39313 Query: 687 agtgagctat 696 |||||||||| Sbjct: 39314 agtgagctat 39323 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Minus Query: 627 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 686 ||||||||||||||||| || ||||| ||| |||| ||| ||||| | ||||| |||| Sbjct: 20146 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 20087 Query: 687 agtgagctat 696 |||||||||| Sbjct: 20086 agtgagctat 20077
>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2 Length = 659 Score = 180 bits (91), Expect = 4e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 393 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 452 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 151 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 92 Query: 453 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 512 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 91 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 32 Query: 513 tctcaccaatgttttcgttactcaagccgac 543 ||||||||||||||||||||||||||||||| Sbjct: 31 tctcaccaatgttttcgttactcaagccgac 1 Score = 129 bits (65), Expect = 1e-26 Identities = 104/116 (89%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 |||| |||||||| || ||||||||||| | ||||||||||||||||| |||||||| | Sbjct: 458 gggcgccccttcttccgaagttacggggccagtttgccgagttccttag-agagagttct 400 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggta 118 ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 399 ctcgcgccccttggtattctctaccaacctacctgtgtcggtttcaggtacaggta 344
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 180 bits (91), Expect = 4e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 114014 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 114073 Query: 455 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 513 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 114074 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 114133 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 114134 ctcaccaatgttttcgctactcaagccgacattctcacttccg 114176 Score = 180 bits (91), Expect = 4e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3503 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3444 Query: 455 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 513 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 3443 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 3384 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 556 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 3383 ctcaccaatgttttcgctactcaagccgacattctcacttccg 3341 Score = 149 bits (75), Expect = 1e-32 Identities = 105/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| | Sbjct: 113683 gggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttat 113741 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 113742 ctcgcgccccttagtattctctacttacccacctgtgtcggttttgggtacagg 113795 Score = 149 bits (75), Expect = 1e-32 Identities = 105/114 (92%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| | Sbjct: 3834 gggcaccccttctcccgaagttacggggctattttgccgagttccttag-agagagttat 3776 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacagg 116 ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 3775 ctcgcgccccttagtattctctacttacccacctgtgtcggttttgggtacagg 3722 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| || Sbjct: 114254 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 114313 Query: 685 tcagtgagctat 696 ||||||||||| Sbjct: 114314 ccagtgagctat 114325 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 625 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 684 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| || Sbjct: 3263 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 3204 Query: 685 tcagtgagctat 696 ||||||||||| Sbjct: 3203 ccagtgagctat 3192 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 cggaacgctcccctaccgatg 617 ||||||||||||||||||||| Sbjct: 114217 cggaacgctcccctaccgatg 114237 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 cggaacgctcccctaccgatg 617 ||||||||||||||||||||| Sbjct: 3300 cggaacgctcccctaccgatg 3280
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 178 bits (90), Expect = 2e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 1430 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 1371 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 1370 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 1311 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1310 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1261 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 1729 ccccttctcccgaagttacggggccattttgccgagttccttag-agagagttctctcgc 1671 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| ||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 1670 tccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 1621
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 178 bits (90), Expect = 2e-41 Identities = 147/166 (88%) Strand = Plus / Minus Query: 398 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 457 ||||||| |||||||| | ||||||||||| |||||||| || |||||| ||||||| Sbjct: 1390 caggaatgttgacctgcttgccatcgactacacctttcggtcttgccttaggtcctgact 1331 Query: 458 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 517 ||||||| ||||||||||| | | ||||| |||| |||||||||||||||||||||||| Sbjct: 1330 aaccctccatggacgaacctagtgaaggaacccttaggttttcggggcattggattctca 1271 Query: 518 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1270 ccaatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1225 Score = 139 bits (70), Expect = 1e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1668 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1610 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||| ||||| ||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 1609 atctcgctccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 1553 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggca 643 ||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 1192 gcggaacgctcccctaccgatatcttacgatatcccacagcttcggca 1145
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 178 bits (90), Expect = 2e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 453 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 3168 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 3109 Query: 454 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 513 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 3108 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 3049 Query: 514 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 3048 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 2999 Score = 125 bits (63), Expect = 2e-25 Identities = 99/110 (90%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 8 ccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcgc 67 |||||||| || ||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct: 3467 ccccttctcccgaagttacggggccattttgccgagttccttag-agagagttctctcgc 3409 Query: 68 gcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| ||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 3408 tccccttggtattctctacctacctacttgtgtcagtttcgggtacaggt 3359
>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA Length = 212 Score = 178 bits (90), Expect = 2e-41 Identities = 121/130 (93%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 433 ttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacctt 492 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 64 ttcggcctgatgataggccctgactcaccctccgtggac-aaccttgcggaggaaccctt 122 Query: 493 gggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgct 552 |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123 aggttttcgaggcattggattctcaccaacgtttgcgttactcaagccgacattctcgct 182 Query: 553 tccgcttcgt 562 |||| ||||| Sbjct: 183 tccgattcgt 192
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 48953 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 49012 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 49013 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 49072 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 49073 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 49121 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 5406 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 5347 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 5346 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 5287 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 563 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 5286 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 5238 Score = 109 bits (55), Expect = 1e-20 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 ||||| |||||| || |||||||| | |||||||||||||||||||| |||||||| || Sbjct: 48653 ggcactccttctcccgaagttacggagttattttgccgagttccttag-agagagttatc 48711 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtt 105 |||||||||| |||| ||||||||||||||||||||||||| Sbjct: 48712 tcgcgccccttagtatactctacctacccacctgtgtcggtt 48753 Score = 109 bits (55), Expect = 1e-20 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 ||||| |||||| || |||||||| | |||||||||||||||||||| |||||||| || Sbjct: 5706 ggcactccttctcccgaagttacggagttattttgccgagttccttag-agagagttatc 5648 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtt 105 |||||||||| |||| ||||||||||||||||||||||||| Sbjct: 5647 tcgcgccccttagtatactctacctacccacctgtgtcggtt 5606
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 176 bits (89), Expect = 6e-41 Identities = 152/173 (87%) Strand = Plus / Minus Query: 398 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 457 |||||||||| ||||| | ||||||||||||||| |||||||| |||||| | ||||| Sbjct: 3682 caggaatattaacctgatttccatcgactacgcccttcggccttgccttaggtcttgact 3623 Query: 458 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 517 ||||| | ||||||| ||| | | ||||| |||| ||||||| |||||||||||||||| Sbjct: 3622 aacccttcatggacgagcctagtgaaggaacccttaggttttcagggcattggattctca 3563 Query: 518 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 570 |||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 3562 ccaatgttttcgttactcaagccgacattctcacttccgcttcgtccaccccc 3510 Score = 115 bits (58), Expect = 2e-22 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 3 gggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgt 62 ||||||||||||| || ||||||||||| | |||||||||||||||| |||||||| | Sbjct: 4007 gggcaccccttcttccgaagttacggggccagtttgccgagttcctta-aagagagttct 3949 Query: 63 ctcgcgcccctaggtattctctacctacccacctgtgtcggttt 106 ||||||||| ||||||||||||||| ||| |||||||||||||| Sbjct: 3948 ctcgcgcccttaggtattctctacccacctacctgtgtcggttt 3905
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 176 bits (89), Expect = 6e-41 Identities = 177/205 (86%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 360 tagcctcctccgtccctccgtaccaa-caaggggtagtacaggaatattgacctgttgtc 418 |||||| ||||||||||| ||||||| ||| | ||||||||||| || |||||||| | Sbjct: 1444 tagccttctccgtccctcggtaccaaacaatttgcagtacaggaatgttaacctgttggc 1385 Query: 419 catcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacctt 478 ||||| ||||||||||||||| |||||| ||||||||||||||| ||||||| ||| Sbjct: 1384 catcggatacgcctttcggcctctccttaggtcctgactcaccctccatggacgagccta 1325 Query: 479 gcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaag 538 | ||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1324 ctgaaggaacccttaggttttcggagcattggattctcaccaatgtttgcgttactcaag 1265 Query: 539 ccgacattctcgcttccgcttcgtc 563 ||||||||||| ||||||| ||||| Sbjct: 1264 ccgacattctcacttccgcctcgtc 1240 Score = 139 bits (70), Expect = 1e-29 Identities = 106/117 (90%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 1 gggggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagtt 60 ||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1693 gggggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagtt 1635 Query: 61 gtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 ||||| || | ||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1634 atctcgagctcttaggtattctctacctacctacctgtgtcggtttagggtacaggt 1578 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Minus Query: 596 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 655 |||||||||||||||||||||| || |||| |||||||||||||| ||||||| | Sbjct: 1207 gcggaacgctcccctaccgatga--ttcaccatctcacagcttcggcaggccgcttagtc 1150 Query: 656 ccgttcatcttcagcgcaagggcgctcgatcagtgagctat 696 |||||||| ||| ||||||| ||||| || ||||||||||| Sbjct: 1149 ccgttcattttcggcgcaagagcgcttgaccagtgagctat 1109
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 320997 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 320938 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 320937 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 320878 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 320877 tcacccatgttttcgctactcaagccgacattctcacttc 320838 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 321298 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 321240 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 321239 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 321190 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 320762 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 320703 Query: 693 ctat 696 |||| Sbjct: 320702 ctat 320699
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3420 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3361 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3360 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3301 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3300 tcacccatgttttcgctactcaagccgacattctcacttc 3261 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 3721 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 3663 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 3662 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3613 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3185 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3126 Query: 693 ctat 696 |||| Sbjct: 3125 ctat 3122
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3421 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3362 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3361 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3302 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3301 tcacccatgttttcgctactcaagccgacattctcacttc 3262 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 3722 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 3664 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 3663 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3614 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3186 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3127 Query: 693 ctat 696 |||| Sbjct: 3126 ctat 3123
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3645 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3586 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3585 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3526 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3525 tcacccatgttttcgctactcaagccgacattctcacttc 3486 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 3946 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 3888 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 3887 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 3838 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3410 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3351 Query: 693 ctat 696 |||| Sbjct: 3350 ctat 3347
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 174 bits (88), Expect = 3e-40 Identities = 253/308 (82%), Gaps = 5/308 (1%) Strand = Plus / Minus Query: 389 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 448 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 449 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 508 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 509 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 568 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 569 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 628 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgggcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 629 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 688 ||||| ||||||| ||| || || ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcctattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 689 tgagctat 696 | |||||| Sbjct: 1113 ttagctat 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 7 accccttctncccgagttacggggctattttgccgagttccttagnagagagttgtctcg 66 ||||||||| || |||||||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 1676 accccttctcccaaagttacggggctattttgtcgagttcctta-aagagaattgtcttg 1618 Query: 67 cgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 125 |||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1617 cgcccctaggtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 19460 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 19519 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 19520 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 19579 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 19580 tcacccatgttttcgctactcaagccgacattctcacttc 19619 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 19159 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 19217 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 19218 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 19267 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 19695 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 19754 Query: 693 ctat 696 |||| Sbjct: 19755 ctat 19758
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 1214 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 1273 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1274 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1333 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1334 tcacccatgttttcgctactcaagccgacattctcacttc 1373 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 913 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 971 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 972 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 1021 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 1449 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 1508 Query: 693 ctat 696 |||| Sbjct: 1509 ctat 1512
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 174 bits (88), Expect = 3e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 395 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 454 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 316486 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 316427 Query: 455 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 514 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 316426 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 316367 Query: 515 tcaccaatgttttcgttactcaagccgacattctcgcttc 554 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 316366 tcacccatgttttcgctactcaagccgacattctcacttc 316327 Score = 141 bits (71), Expect = 4e-30 Identities = 101/110 (91%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 316787 ggcaccccttctcccgaagttacggggccattttgccgagttccttag-agagagttatc 316729 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtac 113 |||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 316728 tcgcgcccctcggtattctctaccaccccacctgtgtcggtttcgggtac 316679 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 633 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 692 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 316251 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 316192 Query: 693 ctat 696 |||| Sbjct: 316191 ctat 316188
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 174 bits (88), Expect = 3e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 442 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 501 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 1379 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 1320 Query: 502 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 561 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1319 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 1260 Query: 562 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 613 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 1259 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 1208 Score = 109 bits (55), Expect = 1e-20 Identities = 100/114 (87%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| | ||||||||||||||||| |||||||| || Sbjct: 1749 ggcaccccttctcccgaagttacggggccagtttgccgagttccttag-agagagttctc 1691 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 1690 tcgcgccccttagtattctctaccagtctacctgtgtcggtttggggtacaggt 1637 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactac 428 |||||||||||||| ||||||| |||||||||||| Sbjct: 1431 agtacaggaatattaacctgttttccatcgactac 1397
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 174 bits (88), Expect = 3e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 442 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 501 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 3261 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 3202 Query: 502 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 561 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 3201 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 3142 Query: 562 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 613 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 3141 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 3090 Score = 109 bits (55), Expect = 1e-20 Identities = 100/114 (87%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 4 ggcaccccttctncccgagttacggggctattttgccgagttccttagnagagagttgtc 63 |||||||||||| || ||||||||||| | ||||||||||||||||| |||||||| || Sbjct: 3630 ggcaccccttctcccgaagttacggggccagtttgccgagttccttag-agagagttctc 3572 Query: 64 tcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggt 117 |||||||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 3571 tcgcgccccttagtattctctaccagtctacctgtgtcggtttggggtacaggt 3518 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 394 agtacaggaatattgacctgttgtccatcgactac 428 |||||||||||||| ||||||| |||||||||||| Sbjct: 3313 agtacaggaatattaacctgttttccatcgactac 3279 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,597,423 Number of Sequences: 3902068 Number of extensions: 3597423 Number of successful extensions: 72694 Number of sequences better than 10.0: 2187 Number of HSP's better than 10.0 without gapping: 2166 Number of HSP's successfully gapped in prelim test: 58 Number of HSP's that attempted gapping in prelim test: 58509 Number of HSP's gapped (non-prelim): 13329 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
