ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 5e-63
2gb|BT017510.1| Zea mays clone EL01N0417E07.c mRNA sequence 232 1e-57
3gb|AY106298.1| Zea mays PCO074618 mRNA sequence 226 7e-56
4ref|XM_479484.1| Oryza sativa (japonica cultivar-group), mRNA 192 1e-45
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
8ref|XM_506846.1| PREDICTED Oryza sativa (japonica cultivar-group... 72 3e-09
9ref|XM_466492.1| Oryza sativa (japonica cultivar-group), mRNA 72 3e-09
10dbj|AK121468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
11dbj|AK105384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
12gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) ... 66 2e-07
13emb|AJ234604.1|HVU234604 Hordeum vulgare genomic DNA fragment; c... 66 2e-07
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
15dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
16ref|NM_111428.1| Arabidopsis thaliana unknown protein AT3G05550 ... 48 0.038
17ref|XM_868917.1| PREDICTED: Bos taurus similar to glutamate rece... 44 0.59
18gb|AC108879.3| Homo sapiens chromosome X clone RP11-265P11 map p... 44 0.59
19gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC... 44 0.59
20gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC... 44 0.59
21ref|XM_547132.2| PREDICTED: Canis familiaris similar to glutamat... 44 0.59
22gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, com... 44 0.59
23gb|AC124594.4| Mus musculus BAC clone RP23-10F19 from chromosome... 42 2.3
24emb|AL445440.9| Human DNA sequence from clone RP11-185G1 on chro... 42 2.3
25gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 2.3
26gb|AC156801.2| Mus musculus BAC clone RP23-142F22 from chromosom... 42 2.3
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
28dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
29gb|AC098874.6| Homo sapiens BAC clone RP11-1299G23 from 2, compl... 42 2.3
30dbj|AK120264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
31dbj|AK119685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
32gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
34emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 42 2.3
35emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 42 2.3
36emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb... 42 2.3
37emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 ... 42 2.3
38ref|XM_633567.1| Dictyostelium discoideum hypothetical protein (... 40 9.2
39ref|XM_863020.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
40ref|XM_863013.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
41ref|XM_863009.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
42ref|XM_863006.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
43ref|XM_543880.2| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
44ref|XM_862998.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
45ref|XM_862994.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
46ref|XM_862989.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
47ref|XM_862985.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
48ref|XM_862981.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
49ref|XM_862977.1| PREDICTED: Canis familiaris similar to RAB6-int... 40 9.2
50emb|CR936854.1| Zebrafish DNA sequence from clone RP71-BGZ91K11 ... 40 9.2
51emb|CR385090.8| Zebrafish DNA sequence from clone CH211-245M19 i... 40 9.2
52emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in... 40 9.2
53dbj|AB227387.1| Aspergillus oryzae cDNA, contig sequence: AoEST4254 40 9.2
54dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 9.2
55gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park C... 40 9.2
56gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome ... 40 9.2
57gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cance... 40 9.2
58emb|AL935280.12| Zebrafish DNA sequence from clone DKEY-261J4, c... 40 9.2
59gb|AC007115.1|AC007115 Homo sapiens chromosome 12 clone 917O5, c... 40 9.2
60gb|AF014930.1|AF014930 Oryza sativa aie2 mRNA, partial cds 40 9.2
61emb|X63415.1|CLRRS1 C.longicaudatus rrs1 gene for arginyl-tRNA s... 40 9.2
62gb|L47648.1|BACSERA Bacillus subtilis phosphoglycerate dehydroge... 40 9.2
63emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on ch... 40 9.2
64emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chr... 40 9.2
65emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section... 40 9.2
66gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic seque... 40 9.2
67emb|AL844586.5| Mouse DNA sequence from clone RP23-259N17 on chr... 40 9.2 
>dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024E09, full
           insert sequence
          Length = 696

 Score =  250 bits (126), Expect = 5e-63
 Identities = 237/274 (86%)
 Strand = Plus / Minus

                                                                       
Query: 304 gaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatcatagtactc 363
           ||||||||| ||||| | ||||||| |||| |||||||||||| | || || ||||||||
Sbjct: 361 gaactgcttcgcatactgatgaactcttgatcctgaacctgaccgatggtcgtagtactc 302

                                                                       
Query: 364 caccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatgaagcctggcgtg 423
           |||||| || || | | |||| |||||||| || |||||||||||||| | |||||||||
Sbjct: 301 caccagtgcagagccagccaatgcagccagtgtgagggcctgagcatgcaacctggcgtg 242

                                                                       
Query: 424 gatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatcgatcccgc 483
           ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| | |||
Sbjct: 241 gatgatcttgacgctggtcttcatgccgggcctcgaccagttgtacgcgatcgagctcgc 182

                                                                       
Query: 484 gatccccgtgagccacagcgtccctacggcccggagcttatggtccacgacccagcccct 543
            | ||| || |||||||||||||| |||||||||||||| ||||| ||||||||  ||||
Sbjct: 181 caccccagtcagccacagcgtcccgacggcccggagcttgtggtcgacgacccactccct 122

                                             
Query: 544 catcgcctgcagcgtccccttctcctccgccatt 577
           ||||| ||||| ||| | ||||||||||||||||
Sbjct: 121 catcgactgcatcgtgctcttctcctccgccatt 88
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>gb|BT017510.1| Zea mays clone EL01N0417E07.c mRNA sequence
          Length = 667

 Score =  232 bits (117), Expect = 1e-57
 Identities = 240/281 (85%)
 Strand = Plus / Minus

                                                                       
Query: 296 gatggaaggaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatca 355
           |||| |||||||||||||||||| |  |||||||| || ||||| |||  |||||| || 
Sbjct: 444 gatgaaaggaactgctttgcatattggtgaactttcgatcctgacccttgctggtggtcg 385

                                                                       
Query: 356 tagtactccaccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatgaagc 415
           |||||||||||||||||||| | | |||||||||||||||| || ||||||||||| |||
Sbjct: 384 tagtactccaccagcgcggacccagccaaggcagccagcgtgagagcctgagcatgcagc 325

                                                                       
Query: 416 ctggcgtggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatc 475
           ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| || || 
Sbjct: 324 ctggcgtggatgatcttgacgctggtcttcatgcccggcttggaccagttgtaggcgatg 265

                                                                       
Query: 476 gatcccgcgatccccgtgagccacagcgtccctacggcccggagcttatggtccacgacc 535
           || ||  |||| ||  |||||||||||||||| |||||||||||||| ||||| || |||
Sbjct: 264 gagccgacgatgccgctgagccacagcgtcccgacggcccggagcttgtggtcgaccacc 205

                                                    
Query: 536 cagcccctcatcgcctgcagcgtccccttctcctccgccat 576
           ||  |||||  || ||||| ||  |||||||||||||||||
Sbjct: 204 cactccctcgccgactgcaacgcgcccttctcctccgccat 164
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>gb|AY106298.1| Zea mays PCO074618 mRNA sequence
          Length = 813

 Score =  226 bits (114), Expect = 7e-56
 Identities = 210/242 (86%)
 Strand = Plus / Minus

                                                                       
Query: 296 gatggaaggaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatca 355
           |||| |||||||||||||||||| |  |||||||| || ||||| |||  |||||| || 
Sbjct: 537 gatgaaaggaactgctttgcatattggtgaactttcgatcctgacccttgctggtggtcg 478

                                                                       
Query: 356 tagtactccaccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatgaagc 415
           |||||||||||||||||||| | | |||||||||||||||| || ||||||||||| |||
Sbjct: 477 tagtactccaccagcgcggacccagccaaggcagccagcgtgagagcctgagcatgcagc 418

                                                                       
Query: 416 ctggcgtggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatc 475
           ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || || 
Sbjct: 417 ctggcgtggatgatcttgacgctggtcttcatgcccggcctggaccagttgtaggcgatg 358

                                                                       
Query: 476 gatcccgcgatccccgtgagccacagcgtccctacggcccggagcttatggtccacgacc 535
           || ||  |||| ||  |||||||||||||||| |||||||||||||| ||||| || |||
Sbjct: 357 gagccgacgatgccgctgagccacagcgtcccgacggcccggagcttgtggtcgaccacc 298

             
Query: 536 ca 537
           ||
Sbjct: 297 ca 296
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>ref|XM_479484.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 300

 Score =  192 bits (97), Expect = 1e-45
 Identities = 230/273 (84%), Gaps = 6/273 (2%)
 Strand = Plus / Minus

                                                                       
Query: 304 gaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatcatagtactc 363
           ||||||||| ||||| | ||||||| |||| |||||||||||| | || || ||||||||
Sbjct: 267 gaactgcttcgcatactgatgaactcttgatcctgaacctgaccgatggtcgtagtactc 208

                                                                       
Query: 364 caccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatgaagcctggcgtg 423
           |||||| || || | | |||| |||||||| || |||||||||||||| |    ||||||
Sbjct: 207 caccagtgcagagccagccaatgcagccagtgtgagggcctgagcatgcaa---ggcgtg 151

                                                                       
Query: 424 gatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatcgatcccgc 483
           ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| | |||
Sbjct: 150 gatgatcttgacgctggtcttcatgccgggcctcgaccagttgtacgcgatcgagctcgc 91

                                                                       
Query: 484 gatccccgtgagccacagcgtccctacggcccggagcttatggtccacgacccagcccct 543
            | ||| || |||||||||||    |||||||||||||| ||||| ||||||||  ||||
Sbjct: 90  caccccagtcagccacagcgt---gacggcccggagcttgtggtcgacgacccactccct 34

                                            
Query: 544 catcgcctgcagcgtccccttctcctccgccat 576
           ||||| ||||| ||| | |||||||||||||||
Sbjct: 33  catcgactgcatcgtgctcttctcctccgccat 1
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                            
Query: 415      cctggcgtggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaat 474
                |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 28431045 cctggcgtggatgatcttgacgctggtcttcatgccgggcctcgaccagttgtacgcgat 28430986

                                                  
Query: 475      cgatcccgcgatccccgtgagccacagcgtccct 508
                ||| | ||| | ||| || |||||||||||||||
Sbjct: 28430985 cgagctcgccaccccagtcagccacagcgtccct 28430952



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                            
Query: 304      gaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatcatagtactc 363
                ||||||||| ||||| | ||||||| |||| |||||||||||| | || || ||||||||
Sbjct: 28431288 gaactgcttcgcatactgatgaactcttgatcctgaacctgaccgatggtcgtagtactc 28431229

                                                                
Query: 364      caccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatg 411
                |||||| || || | | |||| |||||||| || ||||||||||||||
Sbjct: 28431228 caccagtgcagagccagccaatgcagccagtgtgagggcctgagcatg 28431181



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 509      acggcccggagcttatggtccacgacccagcccctcatcgcctgcagcgtccccttctcc 568
                |||||||||||||| ||||| ||||||||  ||||||||| ||||| ||| | |||||||
Sbjct: 28430839 acggcccggagcttgtggtcgacgacccactccctcatcgactgcatcgtgctcttctcc 28430780

                         
Query: 569      tccgccatt 577
                |||||||||
Sbjct: 28430779 tccgccatt 28430771
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                          
Query: 415    cctggcgtggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaat 474
              |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 156608 cctggcgtggatgatcttgacgctggtcttcatgccgggcctcgaccagttgtacgcgat 156549

                                                
Query: 475    cgatcccgcgatccccgtgagccacagcgtccct 508
              ||| | ||| | ||| || |||||||||||||||
Sbjct: 156548 cgagctcgccaccccagtcagccacagcgtccct 156515



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                          
Query: 304    gaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatcatagtactc 363
              ||||||||| ||||| | ||||||| |||| |||||||||||| | || || ||||||||
Sbjct: 156851 gaactgcttcgcatactgatgaactcttgatcctgaacctgaccgatggtcgtagtactc 156792

                                                              
Query: 364    caccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatg 411
              |||||| || || | | |||| |||||||| || ||||||||||||||
Sbjct: 156791 caccagtgcagagccagccaatgcagccagtgtgagggcctgagcatg 156744



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                          
Query: 509    acggcccggagcttatggtccacgacccagcccctcatcgcctgcagcgtccccttctcc 568
              |||||||||||||| ||||| ||||||||  ||||||||| ||||| ||| | |||||||
Sbjct: 156402 acggcccggagcttgtggtcgacgacccactccctcatcgactgcatcgtgctcttctcc 156343

                       
Query: 569    tccgccatt 577
              |||||||||
Sbjct: 156342 tccgccatt 156334
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>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0304A10
          Length = 21211

 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                         
Query: 415   cctggcgtggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaat 474
             |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 12832 cctggcgtggatgatcttgacgctggtcttcatgccgggcctcgaccagttgtacgcgat 12773

                                               
Query: 475   cgatcccgcgatccccgtgagccacagcgtccct 508
             ||| | ||| | ||| || |||||||||||||||
Sbjct: 12772 cgagctcgccaccccagtcagccacagcgtccct 12739



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                         
Query: 304   gaactgctttgcatagtcatgaacttttgaccctgaacctgactggtgatcatagtactc 363
             ||||||||| ||||| | ||||||| |||| |||||||||||| | || || ||||||||
Sbjct: 13075 gaactgcttcgcatactgatgaactcttgatcctgaacctgaccgatggtcgtagtactc 13016

                                                             
Query: 364   caccagcgcggaacaacccaaggcagccagcgtaagggcctgagcatg 411
             |||||| || || | | |||| |||||||| || ||||||||||||||
Sbjct: 13015 caccagtgcagagccagccaatgcagccagtgtgagggcctgagcatg 12968



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 509   acggcccggagcttatggtccacgacccagcccctcatcgcctgcagcgtccccttctcc 568
             |||||||||||||| ||||| ||||||||  ||||||||| ||||| ||| | |||||||
Sbjct: 12626 acggcccggagcttgtggtcgacgacccactccctcatcgactgcatcgtgctcttctcc 12567

                      
Query: 569   tccgccatt 577
             |||||||||
Sbjct: 12566 tccgccatt 12558
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>ref|XM_506846.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.13
           mRNA
          Length = 758

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 398 agggcctgagcatgaagcctggcgtggatgagcttgacgctggtcttcatgccgggcctg 457
           ||||| |||||||| | ||| || ||||||| ||||||||| ||||||||   |||||| 
Sbjct: 298 agggcttgagcatgcaaccttgcatggatgatcttgacgctagtcttcatattgggcctc 239

                               
Query: 458 gaccagttgtacgcaatcga 477
           ||||||||||||||||||||
Sbjct: 238 gaccagttgtacgcaatcga 219
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>ref|XM_466492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 665

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 398 agggcctgagcatgaagcctggcgtggatgagcttgacgctggtcttcatgccgggcctg 457
           ||||| |||||||| | ||| || ||||||| ||||||||| ||||||||   |||||| 
Sbjct: 301 agggcttgagcatgcaaccttgcatggatgatcttgacgctagtcttcatattgggcctc 242

                               
Query: 458 gaccagttgtacgcaatcga 477
           ||||||||||||||||||||
Sbjct: 241 gaccagttgtacgcaatcga 222
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>dbj|AK121468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147K15, full
           insert sequence
          Length = 666

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 398 agggcctgagcatgaagcctggcgtggatgagcttgacgctggtcttcatgccgggcctg 457
           ||||| |||||||| | ||| || ||||||| ||||||||| ||||||||   |||||| 
Sbjct: 302 agggcttgagcatgcaaccttgcatggatgatcttgacgctagtcttcatattgggcctc 243

                               
Query: 458 gaccagttgtacgcaatcga 477
           ||||||||||||||||||||
Sbjct: 242 gaccagttgtacgcaatcga 223
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>dbj|AK105384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C12, full
           insert sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 398 agggcctgagcatgaagcctggcgtggatgagcttgacgctggtcttcatgccgggcctg 457
           ||||| |||||||| | ||| || ||||||| ||||||||| ||||||||   |||||| 
Sbjct: 298 agggcttgagcatgcaaccttgcatggatgatcttgacgctagtcttcatattgggcctc 239

                               
Query: 458 gaccagttgtacgcaatcga 477
           ||||||||||||||||||||
Sbjct: 238 gaccagttgtacgcaatcga 219
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>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete
             cds
          Length = 15688

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 65/75 (86%), Gaps = 3/75 (4%)
 Strand = Plus / Minus

                                                                         
Query: 322   atgaacttttgaccctgaacctgactggtgatcatagt---actccaccagcgcggaaca 378
             ||||| |||||| |||||||||||||| ||||| ||||   |||||||||| || |||||
Sbjct: 10523 atgaatttttgatcctgaacctgactgatgatcttagtaccactccaccagtgcagaaca 10464

                            
Query: 379   acccaaggcagccag 393
              ||||||||||||||
Sbjct: 10463 gcccaaggcagccag 10449



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 182   atgccagattgtttgctcagaaaataacatcaacaaattccatatcagctaatgga 237
             ||||| |||||||||||||||||||| || ||| | |||||| ||||||| |||||
Sbjct: 12847 atgccggattgtttgctcagaaaatagcaacaatagattccaaatcagctgatgga 12792



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 182   atgccagattgtttgctcagaaaataacatcaacaaattccatatcagctaatggaagcc 241
             ||||| |||| |||||||||||| ||||| ||| |||||||||||||||| ||||  |||
Sbjct: 10644 atgccggattatttgctcagaaa-taacagcaataaattccatatcagctgatgggtgcc 10586

                 
Query: 242   tata 245
             ||||
Sbjct: 10585 tata 10582



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 117   aatgctggttcagtagcttatacagagaacaggaagcctgcagaacttggataacggca 175
             |||||||||||||| |||| | |||| |||||| ||||||||| | || ||||||||||
Sbjct: 12920 aatgctggttcagtggcttttgcagaaaacagggagcctgcagtatttcgataacggca 12862



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 85/103 (82%), Gaps = 6/103 (5%)
 Strand = Plus / Minus

                                                                         
Query: 322   atgaacttttgaccctgaacctgactggtgatc-----atagtactccaccagcgcggaa 376
             |||||||||||| |||||||||||||| |||||     | | ||||||| ||| || |||
Sbjct: 12725 atgaacttttgatcctgaacctgactgatgatcttggtagactactccatcagtgcagaa 12666

                                                        
Query: 377   caacccaaggcag-ccagcgtaagggcctgagcatgaagcctg 418
             ||||||||||||| |  | ||||||||| | ||||||||||||
Sbjct: 12665 caacccaaggcagtcgggggtaagggccggtgcatgaagcctg 12623



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 68/82 (82%), Gaps = 3/82 (3%)
 Strand = Plus / Minus

                                                                         
Query: 62    tggttcaggaaaatacatatttccactaccacagatttgcatacggc---tgcatcaaaa 118
             |||||||||||| |||||||||||  ||||||  || ||||||||||   |  |  ||||
Sbjct: 10768 tggttcaggaaagtacatatttccgttaccacgcatctgcatacggcatttttacaaaaa 10709

                                   
Query: 119   tgctggttcagtagcttataca 140
             ||||||||||||||||| ||||
Sbjct: 10708 tgctggttcagtagcttttaca 10687
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>emb|AJ234604.1|HVU234604 Hordeum vulgare genomic DNA fragment; clone MWG0874.uni
          Length = 434

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 65/75 (86%), Gaps = 3/75 (4%)
 Strand = Plus / Plus

                                                                       
Query: 322 atgaacttttgaccctgaacctgactggtgatcatagt---actccaccagcgcggaaca 378
           ||||| |||||| |||||||||||||| ||||| ||||   |||||||||| || |||||
Sbjct: 144 atgaatttttgatcctgaacctgactgatgatcttagtaccactccaccagtgcagaaca 203

                          
Query: 379 acccaaggcagccag 393
            ||||||||||||||
Sbjct: 204 gcccaaggcagccag 218



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 182 atgccagattgtttgctcagaaaataacatcaacaaattccatatcagctaatggaagcc 241
           ||||| |||| |||||||||||| ||||| ||| |||||||||||||||| ||||  |||
Sbjct: 23  atgccggattatttgctcagaaa-taacagcaataaattccatatcagctgatgggtgcc 81

               
Query: 242 tata 245
           ||||
Sbjct: 82  tata 85
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 422      tggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatcga 477
                ||||||| ||||||||| ||||||||   |||||| ||||||||||||||||||||
Sbjct: 22947590 tggatgatcttgacgctagtcttcatattgggcctcgaccagttgtacgcaatcga 22947535
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 422   tggatgagcttgacgctggtcttcatgccgggcctggaccagttgtacgcaatcga 477
             ||||||| ||||||||| ||||||||   |||||| ||||||||||||||||||||
Sbjct: 67392 tggatgatcttgacgctagtcttcatattgggcctcgaccagttgtacgcaatcga 67337
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>ref|NM_111428.1| Arabidopsis thaliana unknown protein AT3G05550 mRNA, complete cds
          Length = 294

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 401 gcctgagcatgaagcctggcgtggatgagcttgacgctggtcttcatg 448
           |||||||| || | |||||||||||||| |||||| ||||| ||||||
Sbjct: 176 gcctgagcgtgcaacctggcgtggatgatcttgacactggttttcatg 129
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>ref|XM_868917.1| PREDICTED: Bos taurus similar to glutamate receptor, ionotropic,
            NMDA2A (epsilon 1) (LOC524212), partial mRNA
          Length = 3388

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 484  gatccccgtgagccacagcgtc 505
            ||||||||||||||||||||||
Sbjct: 1390 gatccccgtgagccacagcgtc 1369
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>gb|AC108879.3| Homo sapiens chromosome X clone RP11-265P11 map p11.4, complete
             sequence
          Length = 174766

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 233   atggaagcctatattataattt 254
             ||||||||||||||||||||||
Sbjct: 87190 atggaagcctatattataattt 87211
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>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
             complete sequence
          Length = 100887

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 415   cctggcgtggatgagcttgacgctggtcttcatg 448
             |||||||||||||| |||||| ||||| ||||||
Sbjct: 93805 cctggcgtggatgatcttgacactggttttcatg 93838
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>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence,
            complete sequence
          Length = 91924

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 415  cctggcgtggatgagcttgacgctggtcttcatg 448
            |||||||||||||| |||||| ||||| ||||||
Sbjct: 7515 cctggcgtggatgatcttgacactggttttcatg 7548
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>ref|XM_547132.2| PREDICTED: Canis familiaris similar to glutamate receptor,
            ionotropic, NMDA2A (epsilon 1) (LOC490012), mRNA
          Length = 5184

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 484  gatccccgtgagccacagcgtc 505
            ||||||||||||||||||||||
Sbjct: 2701 gatccccgtgagccacagcgtc 2680
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>gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, complete sequence
          Length = 190466

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 199   cagaaaataacatcaacaaatt 220
             ||||||||||||||||||||||
Sbjct: 59111 cagaaaataacatcaacaaatt 59132
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>gb|AC124594.4| Mus musculus BAC clone RP23-10F19 from chromosome 15, complete sequence
          Length = 191302

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   tgaaatgccagattgtttgct 198
             |||||||||||||||||||||
Sbjct: 68158 tgaaatgccagattgtttgct 68178
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>emb|AL445440.9| Human DNA sequence from clone RP11-185G1 on chromosome 9, complete
              sequence
          Length = 165833

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 187    agattgtttgctcagaaaata 207
              |||||||||||||||||||||
Sbjct: 138033 agattgtttgctcagaaaata 138053
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 568    ctccgccattccgccgaaagc 588
              |||||||||||||||||||||
Sbjct: 540805 ctccgccattccgccgaaagc 540785
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>gb|AC156801.2| Mus musculus BAC clone RP23-142F22 from chromosome 9, complete sequence
          Length = 197974

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 234   tggaagcctatattataattt 254
             |||||||||||||||||||||
Sbjct: 95720 tggaagcctatattataattt 95740
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 398    agggcctgagcatgaagcctggcgtggat 426
              |||||||| || |||||||||||||||||
Sbjct: 606880 agggcctgcgcgtgaagcctggcgtggat 606908
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 398    agggcctgagcatgaagcctggcgtggat 426
              |||||||| || |||||||||||||||||
Sbjct: 562659 agggcctgcgcgtgaagcctggcgtggat 562687
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>gb|AC098874.6| Homo sapiens BAC clone RP11-1299G23 from 2, complete sequence
          Length = 136367

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 597    tcagatcgagctctcctctcc 617
              |||||||||||||||||||||
Sbjct: 113485 tcagatcgagctctcctctcc 113505
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>dbj|AK120264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D01, full
           insert sequence
          Length = 681

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 398 agggcctgagcatgaagcctggcgtggat 426
           |||||||| || |||||||||||||||||
Sbjct: 244 agggcctgcgcgtgaagcctggcgtggat 216
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>dbj|AK119685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A04, full
           insert sequence
          Length = 668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 398 agggcctgagcatgaagcctggcgtggat 426
           |||||||| || |||||||||||||||||
Sbjct: 243 agggcctgcgcgtgaagcctggcgtggat 215
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 398    agggcctgagcatgaagcctggcgtggat 426
              |||||||| || |||||||||||||||||
Sbjct: 562659 agggcctgcgcgtgaagcctggcgtggat 562687
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 398    agggcctgagcatgaagcctggcgtggat 426
              |||||||| || |||||||||||||||||
Sbjct: 606880 agggcctgcgcgtgaagcctggcgtggat 606908
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 398    agggcctgagcatgaagcctggcgtggat 426
              |||||||| || |||||||||||||||||
Sbjct: 180313 agggcctgcgcgtgaagcctggcgtggat 180285
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 398   agggcctgagcatgaagcctggcgtggat 426
             |||||||| || |||||||||||||||||
Sbjct: 41963 agggcctgcgcgtgaagcctggcgtggat 41935
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>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 130544

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 398  agggcctgagcatgaagcctggcgtggat 426
            |||||||| || |||||||||||||||||
Sbjct: 7653 agggcctgcgcgtgaagcctggcgtggat 7625
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>emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 in linkage group 21,
           complete sequence
          Length = 157717

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 307 ctgctttgcatagtcatgaac 327
           |||||||||||||||||||||
Sbjct: 821 ctgctttgcatagtcatgaac 801
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>ref|XM_633567.1| Dictyostelium discoideum hypothetical protein (DDB0185908), partial
            mRNA
          Length = 4158

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  aaaataacatcaacaaattc 221
            ||||||||||||||||||||
Sbjct: 1984 aaaataacatcaacaaattc 2003
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>ref|XM_863020.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 12 (LOC486753), mRNA
          Length = 3522

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1952 gtccccttctcctccgccat 1933
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>ref|XM_863013.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 11 (LOC486753), mRNA
          Length = 3229

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1952 gtccccttctcctccgccat 1933
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>ref|XM_863009.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 10 (LOC486753), mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1577 gtccccttctcctccgccat 1558
to top
>ref|XM_863006.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 9 (LOC486753), mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1577 gtccccttctcctccgccat 1558
to top
>ref|XM_543880.2| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 1 (LOC486753), mRNA
          Length = 3351

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1661 gtccccttctcctccgccat 1642
to top
>ref|XM_862998.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 8 (LOC486753), mRNA
          Length = 3879

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1952 gtccccttctcctccgccat 1933
to top
>ref|XM_862994.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 7 (LOC486753), mRNA
          Length = 3231

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1661 gtccccttctcctccgccat 1642
to top
>ref|XM_862989.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 6 (LOC486753), mRNA
          Length = 3363

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1661 gtccccttctcctccgccat 1642
to top
>ref|XM_862985.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 5 (LOC486753), mRNA
          Length = 3183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1577 gtccccttctcctccgccat 1558
to top
>ref|XM_862981.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
            isoform epsilon, transcript variant 4 (LOC486753), mRNA
          Length = 2878

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 557  gtccccttctcctccgccat 576
            ||||||||||||||||||||
Sbjct: 1577 gtccccttctcctccgccat 1558
to top
>ref|XM_862977.1| PREDICTED: Canis familiaris similar to RAB6-interacting protein 2
           isoform epsilon, transcript variant 3 (LOC486753), mRNA
          Length = 2463

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 557 gtccccttctcctccgccat 576
           ||||||||||||||||||||
Sbjct: 761 gtccccttctcctccgccat 742
to top
>emb|CR936854.1| Zebrafish DNA sequence from clone RP71-BGZ91K11 in linkage group 5,
             complete sequence
          Length = 98528

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   gcatgtgaaatgccagattg 192
             ||||||||||||||||||||
Sbjct: 13690 gcatgtgaaatgccagattg 13671
to top
>emb|CR385090.8| Zebrafish DNA sequence from clone CH211-245M19 in linkage group 5,
             complete sequence
          Length = 140222

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    catttcaacagtacattcat 58
             ||||||||||||||||||||
Sbjct: 77286 catttcaacagtacattcat 77267
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>emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in linkage group 8,
             complete sequence
          Length = 107559

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    catttcaacagtacattcat 58
             ||||||||||||||||||||
Sbjct: 40956 catttcaacagtacattcat 40937
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>dbj|AB227387.1| Aspergillus oryzae cDNA, contig sequence: AoEST4254
          Length = 775

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ccgccattccgccgaaagct 589
           ||||||||||||||||||||
Sbjct: 135 ccgccattccgccgaaagct 154
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 570     ccgccattccgccgaaagct 589
               ||||||||||||||||||||
Sbjct: 2292730 ccgccattccgccgaaagct 2292749
to top
>gb|AC078873.22| Homo sapiens 12q BAC RP11-916O13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190073

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cagaaaataacatcaacaaa 218
              ||||||||||||||||||||
Sbjct: 148176 cagaaaataacatcaacaaa 148157
to top
>gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-327J16,
             complete sequence
          Length = 116793

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   ttgctcagaaaataacatcaacaa 217
             |||||||| |||||||||||||||
Sbjct: 81564 ttgctcaggaaataacatcaacaa 81541
to top
>gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    cagaaaataacatcaacaaa 218
              ||||||||||||||||||||
Sbjct: 108659 cagaaaataacatcaacaaa 108678
to top
>emb|AL935280.12| Zebrafish DNA sequence from clone DKEY-261J4, complete sequence
          Length = 221563

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gcatgtgaaatgccagattg 192
             ||||||||||||||||||||
Sbjct: 87724 gcatgtgaaatgccagattg 87743
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>gb|AC007115.1|AC007115 Homo sapiens chromosome 12 clone 917O5, complete sequence
          Length = 180821

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    cagaaaataacatcaacaaa 218
              ||||||||||||||||||||
Sbjct: 104978 cagaaaataacatcaacaaa 104997
to top
>gb|AF014930.1|AF014930 Oryza sativa aie2 mRNA, partial cds
          Length = 633

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 398 agggcctgagcatgaagcctggcgtgga 425
           |||||||| || ||||||||||||||||
Sbjct: 222 agggcctgcgcgtgaagcctggcgtgga 195
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>emb|X63415.1|CLRRS1 C.longicaudatus rrs1 gene for arginyl-tRNA synthetase
          Length = 2131

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   ttgcatacggctgcatcaaa 117
            ||||||||||||||||||||
Sbjct: 1526 ttgcatacggctgcatcaaa 1545
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>gb|L47648.1|BACSERA Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA,
             ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG,
             ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC,
             spore cortex lytic enzyme (sleB), ypeB, ypfA, ypfB,
             cytidine monophosphate kinase (cmk), ypfD, ypgA, yphA,
             yphB, yphC, NAD+ dependent glycerol-3-phosphate
             dehydrogenase (glyc), yphE and yphF genes, complete cds
          Length = 24887

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tacagagaacaggaagcctg 156
             ||||||||||||||||||||
Sbjct: 10936 tacagagaacaggaagcctg 10955
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>emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on chromosome 12, complete
             sequence
          Length = 201738

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   aaatgccagattgtttgctc 199
             ||||||||||||||||||||
Sbjct: 96540 aaatgccagattgtttgctc 96521
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>emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chromosome 2, complete
             sequence
          Length = 202046

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   agaaaataacatcaacaaat 219
             ||||||||||||||||||||
Sbjct: 68171 agaaaataacatcaacaaat 68190
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>emb|Z99115.2|BSUB0012 Bacillus subtilis complete genome (section 12 of 21): from 2207806 to
              2409180
          Length = 201375

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tacagagaacaggaagcctg 156
              ||||||||||||||||||||
Sbjct: 193156 tacagagaacaggaagcctg 193137
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>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene
              island PAGI-3(SG)
          Length = 128136

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 648    cgacaggggcctgggtgggg 667
              ||||||||||||||||||||
Sbjct: 101354 cgacaggggcctgggtgggg 101373
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>emb|AL844586.5| Mouse DNA sequence from clone RP23-259N17 on chromosome 2, complete
              sequence
          Length = 181467

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     atttccactaccacagattt 99
              ||||||||||||||||||||
Sbjct: 110471 atttccactaccacagattt 110490


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,849,331
Number of Sequences: 3902068
Number of extensions: 5849331
Number of successful extensions: 106857
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106519
Number of HSP's gapped (non-prelim): 329
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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