ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11k21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 1243 bits (627), Expect = 0.0 Identities = 677/690 (98%), Gaps = 3/690 (0%) Strand = Plus / Minus Query: 1 cacatacttaattgacaacagtagaataaaatn-ccaagtagattctgggacacatggta 59 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1033 cacatacttaattgacaacagtagaataaaatcaccaagtagattctgggacacatggta 974 Query: 60 gggaacatcacataacaccaatccagctacacacagatagattattgcttctggtccacc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 973 gggaacatcacataacaccaatccagctacacacagatagattattgcttctggtccacc 914 Query: 120 aacaaattaaacatggcaactctcccttcttttaatccagctaataattgaaaacattat 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 aacaaattaaacatggcaactctcccttcttttaatccagctaataattgaaaacattat 854 Query: 180 atatctaagaaaccacagcacactgcaagaacaccatccttatggcatcatagtcttcct 239 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 853 atatctaagaaaccatagcacactgcaagaacaccatccttgtggcatcatagtcttcct 794 Query: 240 cttactgccccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagacc 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 cttactgccccatctttagctcttgttcttgtacttgtccttggcccttggtgcaagacc 734 Query: 300 gatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctccca 359 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 gatggcttcggaccccttcatgatcctcaagcgtttgcatgaagcaacaaacatctccca 674 Query: 360 tgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 673 tgggacgtctccaacaagcatccagtctccatccttgtcttcgtaagtagtaacaacatc 614 Query: 420 tgaaccgttcactgcctcaaccatcttcccctcattcccagttgcggtgaaggtgctgaa 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 tgaaccgttcactgcctcaaccatcttcccctcattcccagttgcggtgaaggtgctgaa 554 Query: 480 catcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccacctt 539 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 catcttctgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccacctt 494 Query: 540 gcgcaggtagggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccag 599 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 493 gcgcaggtagggcgcgccgtccatgctcaccttgacaaagttgg-agccgttggcaccag 435 Query: 600 cagcagcggtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccg 659 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cagcagcggcagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccg 375 Query: 660 attggacggtcattggcgttcctgcggtac 689 | |||||||||| ||||||||||||||||| Sbjct: 374 actggacggtca-tggcgttcctgcggtac 346
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 394 bits (199), Expect = e-106 Identities = 343/389 (88%), Gaps = 4/389 (1%) Strand = Plus / Minus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1092 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 1033 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 1032 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 973 Query: 155 tccagctaataattgaaaacattatatatctaag-aaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| |||||| |||||| | |||||||||||||||| Sbjct: 972 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 913 Query: 214 catccttatggcatcatagtcttcctctta---ctgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||||| |||| ||| || |||||||||||||| Sbjct: 912 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 853 Query: 271 tacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaag 330 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 852 tacttgtcctttgctcttggtgcaagaccaatggcttcggaacccttcatgatcctcaag 793 Query: 331 cgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgcca 390 ||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||| ||| Sbjct: 792 cgtttgcatgactcgacaaacatctgccacgggacatctccaacaagcatccagtcacca 733 Query: 391 tccttgtcttcgtaagtagtaacaacatc 419 ||||||||||| ||||| |||||| |||| Sbjct: 732 tccttgtcttcataagttgtaacagcatc 704 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 454 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 513 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 678 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 619 Query: 514 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 618 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 560 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 512 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 458
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 389 bits (196), Expect = e-105 Identities = 334/378 (88%), Gaps = 4/378 (1%) Strand = Plus / Minus Query: 46 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 105 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1086 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatagattatt 1027 Query: 106 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 165 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1026 gcttctggtccataaacaaattaaacatgacaactcttccttcttttaatccagctaaac 967 Query: 166 attgaaaacattatatatctaag-aaaccacagcacactgcaagaacaccatccttatgg 224 | ||||| |||||| |||||| |||||| | ||||||||||||||||||| ||||||| Sbjct: 966 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccattcttatgg 907 Query: 225 catcatagtcttcctctta---ctgccccatgtttagctcttgttcttgtacttgtcctt 281 || ||| || | ||||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 906 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 847 Query: 282 ggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatga 341 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgctcttggtgcaagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatga 787 Query: 342 agcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 | |||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 786 ctcgacaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtcttc 727 Query: 402 gtaagtagtaacaacatc 419 ||||| |||||| |||| Sbjct: 726 ataagttgtaacagcatc 709 Score = 151 bits (76), Expect = 4e-33 Identities = 110/120 (91%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 454 ttcccagttgcgg-tgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgta 512 ||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| Sbjct: 683 ttcccagttgcgggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgta 624 Query: 513 ggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 | ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 623 gctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 564 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 516 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 462
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 361 bits (182), Expect = 2e-96 Identities = 314/356 (88%), Gaps = 4/356 (1%) Strand = Plus / Minus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 360 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 301 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 300 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 241 Query: 155 tccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 240 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 181 Query: 214 catccttatggcatcatagtcttcctct---tactgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||| |||||| ||| || |||||||||||||| Sbjct: 180 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 121 Query: 271 tacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaag 330 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 120 tacttgtcctttgctcttggtgcaagaccaatggcttcggaacccttcatgatcctcaag 61 Query: 331 cgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtc 386 ||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||| Sbjct: 60 cgtttgcatgactcgacaaacatctgccacgggacatctccaacaagcatccagtc 5
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 331 bits (167), Expect = 2e-87 Identities = 191/199 (95%) Strand = Plus / Minus Query: 381 ccagtcgccatccttgtcttcgtaagtagtaacaacatctgaaccgttcactgcctcaac 440 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 360 ccagtctccgtccttgtcttcgtaagtagtaacaacatctgaaccattcactgcctcaac 301 Query: 441 catcttcccctcattcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatgga 500 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 300 catcttcccctcattcccagttgcggtgaaggtgctgaacatcttctgcagtgcaatgga 241 Query: 501 gaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtc 560 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 240 gaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggtagggcgcaccgtc 181 Query: 561 catgctcaccttgacaaag 579 |||||||||||| |||||| Sbjct: 180 catgctcaccttcacaaag 162 Score = 111 bits (56), Expect = 3e-21 Identities = 72/76 (94%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 613 agcaggctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 108 agcaggctgctgcttctcggtttcctcttccttcttgatcttcaccgactggacggtca- 50 Query: 673 tggcgttcctgcggta 688 |||||||||||||||| Sbjct: 49 tggcgttcctgcggta 34
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 321 bits (162), Expect = 2e-84 Identities = 297/340 (87%), Gaps = 4/340 (1%) Strand = Plus / Minus Query: 72 taacaccaatccagctacacacagatagattattgcttctggtccaccaacaaattaaac 131 ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 1050 taacaccaatccagctacacacaaatggattattgcttctggtccataaacaaattaaac 991 Query: 132 atggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaag-aa 190 ||| ||||||| ||||| |||||||||||||| | ||||| |||||| |||||| || Sbjct: 990 atgacaactcttccttcctttaatccagctaaacaagtaaaaccttatatttctaaggaa 931 Query: 191 accacagcacactgcaagaacaccatccttatggcatcatagtcttcctctta---ctgc 247 |||| | ||||||||||||||||||| |||||||| ||| || | ||||| |||| Sbjct: 930 accataacacactgcaagaacaccatttttatggcaccatgctcagcatcttaatactgc 871 Query: 248 cccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggctt 307 ||| || ||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 870 aacattttcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggctt 811 Query: 308 cggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgt 367 |||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||| | Sbjct: 810 cggaacccttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacat 751 Query: 368 ctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 750 ctccaacaagcatccagtcaccatccttgtcttcataagt 711 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 454 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 513 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 673 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 614 Query: 514 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 613 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 555 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 507 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 453
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 283 bits (143), Expect = 4e-73 Identities = 167/173 (96%), Gaps = 4/173 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttgg-agccgttggcaccagcagcagcg 56 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 55 ---gcagcaggctgctgcttctcggtctcctcctccttcttgatcttaaccga 6
>gb|AY622364.1| Thinopyrum ponticum clone TW-150 EST-SRR marker sequence Length = 174 Score = 276 bits (139), Expect = 9e-71 Identities = 166/173 (95%), Gaps = 4/173 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttgg-agccgttgg---caccagcagcg 59 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 || |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58 gtcgcagcaggctgctgcttctcggtctcctcctccttcttgatcttaaccga 6
>gb|AY622365.1| Triticum aestivum clone WH-150 EST-SRR marker sequence Length = 174 Score = 268 bits (135), Expect = 2e-68 Identities = 165/173 (95%), Gaps = 4/173 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 115 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 114 agggcgcgccgtccatgctcaccttgacaaagttgg-agccgttggcgccagcagcggcg 56 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 55 ---ccagcaggctgctgcttctcggtctcctcctccttcttgatcttaaccga 6
>gb|AY622361.1| Bromus inermis clone SB-150 EST-SRR marker sequence Length = 171 Score = 250 bits (126), Expect = 5e-63 Identities = 162/173 (93%), Gaps = 7/173 (4%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 112 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 |||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 111 agggcgcgccgtccatgctcaccttgacaaagttgg-agccgttggcaccagca------ 59 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 || ||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 58 gtggcagcaggctgctgcttctcggtctcctcttccttcttgatcttaaccga 6
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Minus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1298 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 1239 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 1238 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 1179 Query: 155 tccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 1178 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 1119 Query: 214 catccttatggcatcatagtcttcctct---tactgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||| |||||| ||| || |||||||||||||| Sbjct: 1118 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 1059 Query: 271 tacttgtccttggcccttggtgc 293 ||||||||||| || |||||||| Sbjct: 1058 tacttgtcctttgctcttggtgc 1036 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 454 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 513 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 676 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 617 Query: 514 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 616 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 558 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 293 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 352 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 952 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 893 Query: 353 tc 354 || Sbjct: 892 tc 891 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 760 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 702 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 510 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 456
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Plus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 30188330 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 30188389 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 30188390 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 30188449 Query: 155 tccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 30188450 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 30188509 Query: 214 catccttatggcatcatagtcttcctct---tactgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||| |||||| ||| || |||||||||||||| Sbjct: 30188510 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 30188569 Query: 271 tacttgtccttggcccttggtgc 293 ||||||||||| || |||||||| Sbjct: 30188570 tacttgtcctttgctcttggtgc 30188592 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 457 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 516 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 30189068 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 30189127 Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 30189128 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 30189183 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 293 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 352 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30188676 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30188735 Query: 353 tc 354 || Sbjct: 30188736 tc 30188737 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 30188868 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 30188926 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24085765 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 535 accttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 32942873 accttgcggaggtatggcgccccgtccatgctcacctt 32942910 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||||||||||||||||||||| Sbjct: 24086291 caggtacggcgcgccgtccatgctcacctt 24086320 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 30189231 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 30189285 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||| ||||||||||||||||| Sbjct: 24100650 caggtacggcgccccgtccatgctcacctt 24100621
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Minus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 35565 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 35506 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 35505 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 35446 Query: 155 tccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 35445 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 35386 Query: 214 catccttatggcatcatagtcttcctct---tactgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||| |||||| ||| || |||||||||||||| Sbjct: 35385 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 35326 Query: 271 tacttgtccttggcccttggtgc 293 ||||||||||| || |||||||| Sbjct: 35325 tacttgtcctttgctcttggtgc 35303 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 457 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 516 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 34827 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 34768 Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 34767 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 34712 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 293 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 352 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 35219 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 35160 Query: 353 tc 354 || Sbjct: 35159 tc 35158 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 35027 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 34969 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 34664 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 34610
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Plus Query: 35 caagtagattctgggacacatggtagggaacatcacataacaccaatccagctacacaca 94 ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 30279752 caagtagatcttgggacacacggtaggggacatcacataacaccaatccagctacacaca 30279811 Query: 95 gatagattattgcttctggtccaccaacaaattaaacatggcaactctcccttcttttaa 154 |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 30279812 aatagattattgcttctggtccataaacaaattaaacatgacaactcttccttcttttaa 30279871 Query: 155 tccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgcaagaacac 213 ||||||||| | ||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 30279872 tccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgcaagaacac 30279931 Query: 214 catccttatggcatcatagtcttcctct---tactgccccatgtttagctcttgttcttg 270 ||| ||||||||| ||| || | ||| |||||| ||| || |||||||||||||| Sbjct: 30279932 cattcttatggcaccatgctcagcatcttaatactgcaacattttcagctcttgttcttg 30279991 Query: 271 tacttgtccttggcccttggtgc 293 ||||||||||| || |||||||| Sbjct: 30279992 tacttgtcctttgctcttggtgc 30280014 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 457 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 516 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 30280490 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 30280549 Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 30280550 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 30280605 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 293 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 352 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30280098 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30280157 Query: 353 tc 354 || Sbjct: 30280158 tc 30280159 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 30280290 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 30280348 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24003234 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 535 accttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 33033383 accttgcggaggtatggcgccccgtccatgctcacctt 33033420 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||||||||||||||||||||| Sbjct: 24003760 caggtacggcgcgccgtccatgctcacctt 24003789 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 30280653 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 30280707 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||| ||||||||||||||||| Sbjct: 24016937 caggtacggcgccccgtccatgctcacctt 24016908
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 220 bits (111), Expect = 5e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 257 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaaccct 316 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 809 agctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaaccct 750 Query: 317 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaa 376 ||||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||| Sbjct: 749 tcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaa 690 Query: 377 gcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 |||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 689 gcatccagtcaccatccttgtcttcataagttgtaacagcatc 647 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 454 ttcccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtag 513 |||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| Sbjct: 621 ttcccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtag 562 Query: 514 gtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 561 ctgttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 503 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 455 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 401
>gb|AY622354.1| Lolium temulentum clone LT-150 EST-SRR marker sequence Length = 176 Score = 216 bits (109), Expect = 7e-53 Identities = 159/173 (91%), Gaps = 2/173 (1%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 117 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 ||||||||||||||||||||||||| |||||| | |||||||| | ||||||| ||| Sbjct: 116 agggcgcgccgtccatgctcaccttcacaaaggcag-agccgttgccaccagcagtagca 58 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 | ||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 57 gcagcagca-actgctgcttctcggtctcctcctccttcttgatcttaaccga 6
>gb|AY622356.1| Dactylis glomerata clone OG-150 EST-SRR marker sequence Length = 174 Score = 212 bits (107), Expect = 1e-51 Identities = 158/173 (91%), Gaps = 4/173 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 174 gcagagcaatggagaggtccttgtatgtgttgtacatcttgagatccaccttgcgcaggt 115 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 ||||||||||||||||||||||||| |||||| | ||||||||| |||| ||||| Sbjct: 114 agggcgcgccgtccatgctcaccttcacaaaggcag-agccgttgg---cagccgcagca 59 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 | |||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 58 gcagcagcaggctgctgcttctcggtttcctcttccttcttgatcttaaccga 6
>gb|AY622357.1| Lolium perenne clone PR-150 EST-SRR marker sequence Length = 180 Score = 202 bits (102), Expect = 1e-48 Identities = 159/176 (90%), Gaps = 4/176 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagc---agca 604 ||||||||||||||||||||||||| |||||| | |||||||| | ||||| |||| Sbjct: 120 agggcgcgccgtccatgctcaccttcacaaaggcag-agccgttgccaccagcagtagca 62 Query: 605 gcggtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 || | |||| ||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 61 gcagcagcaacaggctgctgcttctcggtttcctcttccttcttgatcttaaccga 6
>gb|AY622353.1| Lolium multiflorum clone IR-150 EST-SRR marker sequence Length = 180 Score = 202 bits (102), Expect = 1e-48 Identities = 159/176 (90%), Gaps = 4/176 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagc---agca 604 ||||||||||||||||||||||||| |||||| | |||||||| | ||||| |||| Sbjct: 120 agggcgcgccgtccatgctcaccttcacaaaggcag-agccgttgccaccagcagtagca 62 Query: 605 gcggtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 || | |||| ||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 61 gcagcagcaacaggctgctgcttctcggtttcctcttccttcttgatcttaaccga 6
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 202 bits (102), Expect = 1e-48 Identities = 216/252 (85%), Gaps = 4/252 (1%) Strand = Plus / Minus Query: 46 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 105 ||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 4479 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatggattatt 4420 Query: 106 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 165 |||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 4419 gcttctggtccataaacaaattaaacatgacaactcttccttcctttaatccagctaaac 4360 Query: 166 attgaaaacattatatatctaa-gaaaccacagcacactgcaagaacaccatccttatgg 224 | ||||| |||||| ||||| ||||||| | ||||||||||||||||||| |||||| Sbjct: 4359 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccatttttatgg 4300 Query: 225 catcatagtcttcctct---tactgccccatgtttagctcttgttcttgtacttgtcctt 281 || ||| || | ||| |||||| ||| || ||||||||||||||||||||||||| Sbjct: 4299 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 4240 Query: 282 ggcccttggtgc 293 || |||||||| Sbjct: 4239 tgctcttggtgc 4228 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 457 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 516 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 3752 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 3693 Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 3692 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 3637 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 293 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 352 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 4144 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 4085 Query: 353 tc 354 || Sbjct: 4084 tc 4083 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtagtaacaacatc 419 ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||| |||| Sbjct: 3952 gggacatctccaacaagcatccagtcaccatccttgtcttcataagttgtaacagcatc 3894 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 3589 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 3535
>gb|AY622355.1| Schedonorus pratensis clone MF-150 EST-SRR marker sequence Length = 180 Score = 194 bits (98), Expect = 3e-46 Identities = 158/176 (89%), Gaps = 4/176 (2%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 121 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagc---agca 604 |||| |||||||||||||||||||| |||||| | ||| |||| | ||||| |||| Sbjct: 120 agggtgcgccgtccatgctcaccttcacaaaggcag-agctgttgccaccagcagtagca 62 Query: 605 gcggtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 || | |||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 61 gcagcagcagcaggctgctgcttctcggtttcctcttccttcttgatcttaaccga 6
>gb|AY622358.1| Festuca rubra clone RF-150 EST-SRR marker sequence Length = 177 Score = 192 bits (97), Expect = 1e-45 Identities = 155/173 (89%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 177 gcagagcaatggagaggtccttgtaggtcttgtacatgttcagatccaccttgcgcaggt 118 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 ||||||||||||||||||||||||| |||||| | |||||||| | ||||||| || Sbjct: 117 agggcgcgccgtccatgctcaccttcacaaaggcag-agccgttgccaccagcagtagga 59 Query: 608 gtagcagcaggctgctgcttctcggtctcctcctccttcttgatcttcaccga 660 | |||||||||||||||||||| ||| ||||| |||||||||||||| ||||| Sbjct: 58 gcagcagcaggctgctgcttcttggtttcctcttccttcttgatcttaaccga 6
>gb|AY622362.1| Schedonorus arundinaceus clone TFS-150 EST-SRR marker sequence Length = 186 Score = 163 bits (82), Expect = 9e-37 Identities = 157/182 (86%), Gaps = 10/182 (5%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 186 gcagagcaatggagaggtccttgtaggtgttgtacatcttcagatccaccttgcgcaggt 127 Query: 548 agggcgcgccgtccatgctcaccttgacaaagttggaagccgttggcgccagcagcagcg 607 |||| || ||||||||||||||||| |||||| | |||||||| | ||||||| ||| Sbjct: 126 agggtgcaccgtccatgctcaccttcacaaaggcag-agccgttgccaccagcagtagca 68 Query: 608 gtagcagcag---------gctgctgcttctcggtctcctcctccttcttgatcttcacc 658 | |||||||| |||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 67 gcagcagcagcagcagcaggctgctgcttctcggtttcctcttccttcttgatcttaacc 8 Query: 659 ga 660 || Sbjct: 7 ga 6
>dbj|AK102769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G01, full insert sequence Length = 3241 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Plus Query: 457 ccagttgcggtgaaggtgctgaacatcttgtgcagagcaatggagaggtccttgtaggtg 516 ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| || Sbjct: 2645 ccagttgcggtgaaggtgccgaacatcttctgcagagcaagggagaggtccttgtagctg 2704 Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||| || |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 2705 ttgtacatcttcaggtccaccttgcgcaggtagggtgccccgtccatgctgacctt 2760 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 618 gctgctgcttctcggtctcctcctccttcttgatcttcaccgattggacggtcat 672 |||||||||| || | ||||| ||||||||| ||||||| || ||||||||||| Sbjct: 2808 gctgctgcttgtcagcttcctcttccttcttgctcttcactgactggacggtcat 2862
>gb|AY622359.1| Oryza sativa clone RI-150 EST-SRR marker sequence Length = 180 Score = 129 bits (65), Expect = 1e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 488 gcagagcaatggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggt 547 |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct: 180 gcagagcaatggagaggtccttgtagctgttgtacatcttcaggtccaccttgcgcaggt 121 Query: 548 agggcgcgccgtccatgctcacctt 572 |||| |||||||||||||| ||||| Sbjct: 120 agggtgcgccgtccatgctgacctt 96
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 127 bits (64), Expect = 5e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 286 cttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagca 345 |||||||| || || ||||| || || || ||||| ||||| ||||||||||||||| || Sbjct: 752 cttggtgctagtccaatggcctcagatcctttcattatccttaagcgtttgcatgaatca 693 Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaa 405 |||||||||||||| || || || ||||||||||||||||| |||||||||||||||||| Sbjct: 692 acaaacatctcccaaggtacatcaccaacaagcatccagtctccatccttgtcttcgtaa 633 Query: 406 gtag 409 |||| Sbjct: 632 gtag 629
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Minus Query: 316 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 375 ||||| ||||| ||||||||||||||| |||||||||||||||| || || || |||||| Sbjct: 680 ttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaaca 621 Query: 376 agcatccagtcgccatccttgtcttcgtaagtag 409 ||||||||||| ||||| |||||||||||||||| Sbjct: 620 agcatccagtctccatctttgtcttcgtaagtag 587
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 103 bits (52), Expect = 8e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 316 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 375 ||||||||||||||||| ||||||||| |||||||||| ||||||| || ||||| ||| Sbjct: 821 ttcatgatcctcaagcgcttgcatgaatcaacaaacattccccatggaacatctcctaca 762 Query: 376 agcatccagtcgccatccttgtcttcgtaagt 407 |||||||| || |||||||||||||| ||||| Sbjct: 761 agcatccaatctccatccttgtcttcataagt 730
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 752
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 565
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 281 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 340 ||||||| |||||||| || ||||| || | || ||||| || | || ||| ||||||| Sbjct: 811 tggccctgggtgcaagtccaatggcctcagttcctttcattatgcgcaggcgcttgcatg 752 Query: 341 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtctt 400 | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 751 atccaacaaacatctcccatgggacgtcaccaacaagcatccagtcaccatccttatctt 692 Query: 401 cgtaagt 407 | ||||| Sbjct: 691 cataagt 685 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 511 taggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacc 570 ||||| || |||||||| ||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 551 taggtcttatacatcttcagatcaaccttgcgaaggtacggtgcgccgtccatgctcacc 492 Query: 571 ttgacaaa 578 || ||||| Sbjct: 491 ttcacaaa 484
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 866 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 807 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 806 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 748
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 223 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 164 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 163 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 105
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 565
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 825 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 766 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 765 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 707
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 854 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 795 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 794 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 736
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 752
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 101 bits (51), Expect = 3e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 849 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 790 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 789 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 731
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 ||||| |||||||| || || ||||| || || ||||| ||||| | ||| |||||||| Sbjct: 1058 gccctcggtgcaaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgat 999 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 ||||||||||||||||||||||||| || || |||||||||||||| |||||||| ||| Sbjct: 998 tcaacaaacatctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 939 Query: 403 ta 404 || Sbjct: 938 ta 937 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 797 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 742
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25346694 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 25346749 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 25345400 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 25359739 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 25359684
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 25274870 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 25274925 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 25273576 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 25287915 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 25287860
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 13504 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtccatgctcacctt 13559 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 12210 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||| |||||| || | ||| | |||||| || || ||||||||||||||||| Sbjct: 26549 ttgtacaccttgaggtctatcttcctcaggtatggagctccgtccatgctcacctt 26494
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1138 Query: 403 taagt 407 ||||| Sbjct: 1137 taagt 1133
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1256 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1197 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1196 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1137 Query: 403 taagt 407 ||||| Sbjct: 1136 taagt 1132
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 | | |||||||||||| ||||| || || |||||||||||||| |||||||| |||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcg 1138 Query: 403 taagt 407 ||||| Sbjct: 1137 taagt 1133
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 ||||||||| ||||||||||||||||||| || || || ||||||||||| ||||||||| Sbjct: 959 ttgcatgaatcaacaaacatctcccatggaacatcacccacaagcatccaatcgccatcc 900 Query: 394 ttgtcttc 401 |||||||| Sbjct: 899 ttgtcttc 892
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaa 405 ||||||||||||||||| || |||||||| ||||||||||| |||||||||||||| ||| Sbjct: 27206 acaaacatctcccatggaacatctccaactagcatccagtcaccatccttgtcttcataa 27147 Query: 406 gtag 409 |||| Sbjct: 27146 gtag 27143
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 316 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 375 ||||||||| |||| | ||||| ||| ||| ||||||||||| ||||| ||||||||| Sbjct: 101 ttcatgatcttcaacctcttgcaagaatcaatgaacatctcccaggggacatctccaaca 42 Query: 376 agcatccagtcgccatccttgtc 398 ||||||||||||||||||||||| Sbjct: 41 agcatccagtcgccatccttgtc 19
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 518 tgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 706 tgtacatcttgaggtccactttgcgcaggtagggcgcgccgtccaagctcacctt 652 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| | || ||| ||||||||||||| || || |||||||| || || ||||||| Sbjct: 988 tgttcttgcatttctccatggcccttggtgccaggccaatggcttctgatcctttcatga 929 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 ||| | ||| |||||||| | || ||||||||||| || || || || || ||||||| Sbjct: 928 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacatcgccgacgagcatcc 869 Query: 383 agtcgccatccttgtcttcgta 404 |||| || |||||||| ||||| Sbjct: 868 agtccccgtccttgtcctcgta 847
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||||||||| || |||||||| || || |||||||| | | ||||||||| || Sbjct: 685 gcccttggtgcaaggccaatggcttcagaccctttcatgattcggaggcgtttgcacgac 626 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 | || ||||||||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 625 tcgacgaacatctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 566 Query: 403 ta 404 || Sbjct: 565 ta 564 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||||||||||||||||||||| Sbjct: 410 caggtacggcgcgccgtccatgctcacctt 381
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 308 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 249 Query: 394 ttgtc 398 ||||| Sbjct: 248 ttgtc 244
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 347 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 406 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 787 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 728 Query: 407 t 407 | Sbjct: 727 t 727 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 638 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 579 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 578 atgctgaccttgac 565
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 347 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 406 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 778 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 719 Query: 407 t 407 | Sbjct: 718 t 718 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 629 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 570 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 569 atgctgaccttgac 556
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 347 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 406 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 758 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 699 Query: 407 t 407 | Sbjct: 698 t 698 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 609 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 550 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 549 atgctgaccttgac 536
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 347 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaag 406 |||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 844 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataag 785 Query: 407 t 407 | Sbjct: 784 t 784
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 1158 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 1099 Query: 394 ttgtc 398 ||||| Sbjct: 1098 ttgtc 1094
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 274 ttgtacatcttgaggtccaccttgcgcaggtatggcgcgccgtctaagctcacctt 219 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| | || ||| ||||||| || || || || |||||||| || || ||||||| Sbjct: 561 tgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgatcctttcatga 502 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 ||| | ||| |||||||| | || ||||||||||| || ||||| || || ||||||| Sbjct: 501 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtcgccgacgagcatcc 442 Query: 383 agtcgccatccttgtcttcgta 404 ||||||| |||||||| ||||| Sbjct: 441 agtcgccctccttgtcctcgta 420
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| ||| ||||||||||||||| | | ||| ||| |||||||||||| |||||| Sbjct: 830 gcttctgaagccttcatgatcctcattctctggcaggaatcaacaaacatctgccatgga 771 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 || || || |||||||||||||| |||||||||||||| ||||| Sbjct: 770 acatcgcctacaagcatccagtctccatccttgtcttcataagt 727
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 13189632 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 13189573 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 13189572 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 13189530 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 575 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 23118823 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 23118780 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 23119015 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 23118972
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 106820 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 106761 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 106760 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 106718
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | |||||| | ||||| ||||||||| | |||||||||||||| || Sbjct: 710 gctgaacatcttctccagagccaaagagagctccttgtagttcttgtacatcttgaggtc 651 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 |||||| | ||||| || || || |||||||||||||||||| Sbjct: 650 caccttcctgaggtaaggagcaccatccatgctcaccttgaca 608
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 ||||||||||||| |||||||||||| || || || ||||||||||||||||| |||||| Sbjct: 839 ttgcatgaagcaataaacatctcccaaggaacatccccaacaagcatccagtctccatcc 780 Query: 394 tt 395 || Sbjct: 779 tt 778
>gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds Length = 552 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 499 gagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccg 558 ||||||||||||||| | ||||||||||| ||||||||||| | ||||| ||||| || Sbjct: 402 gagaggtccttgtagttcttgtacatcttaagatccaccttcctgaggtaaggcgcacca 343 Query: 559 tccatgctcaccttgaca 576 |||||||| ||||||||| Sbjct: 342 tccatgctaaccttgaca 325
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 73.8 bits (37), Expect = 7e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1222 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1163 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 ||| |||||||||||| || || || || |||||||||||||| |||||||| |||||| Sbjct: 1162 tcaataaacatctcccaaggtacatcaccgacaagcatccagtccccatccttatcttcg 1103 Query: 403 taagt 407 ||||| Sbjct: 1102 taagt 1098
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 281 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 340 |||||||||| || | ||| || ||||| || ||||||| ||||||| | || ||| | Sbjct: 733 tggcccttggagctaaaccaatagcttctcaagccttcattatcctcattctttggcagg 674 Query: 341 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtctt 400 || |||||||||| ||||| ||||| || || |||||||||||||| ||||||||||||| Sbjct: 673 aatcaacaaacatatcccaggggacatcgcctacaagcatccagtctccatccttgtctt 614 Query: 401 c 401 | Sbjct: 613 c 613 Score = 40.1 bits (20), Expect = 9.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 498 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 557 ||||||||| | ||||||| | ||||| ||||| |||||||| | || ||||| || || Sbjct: 495 ggagaggtcatggtaggtgctatacattttgaggtccacctttctgagatagggggctcc 436 Query: 558 gtccatgctcac 569 ||||||||||| Sbjct: 435 atccatgctcac 424
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 7e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1159 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1100 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 ||| |||||||||||| || || || ||||||||||||||||| |||||||| ||||| Sbjct: 1099 tcaataaacatctcccaaggtacatcaccaacaagcatccagtccccatccttatcttca 1040 Query: 403 taagt 407 ||||| Sbjct: 1039 taagt 1035
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 333 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 |||||| |||| |||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 595 tttgcaagaagtcacaaacatgtcccatggtacatctccaactagcatccagtcaccatc 536 Query: 393 cttgtcttc 401 ||||||||| Sbjct: 535 cttgtcttc 527
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 331 cgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgcca 390 |||||||| || |||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 748 cgtttgcaagattcaacaaacatctcccacggaacatctccaacaagcatccaatcacca 689 Query: 391 tccttgtcttcgtaagt 407 || |||||||| ||||| Sbjct: 688 tctttgtcttcataagt 672
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 752 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 697
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 736 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 681
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 833 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 778
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 784 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 729
>gb|BT017977.1| Zea mays clone EL01N0525A01.c mRNA sequence Length = 885 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 498 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 557 ||||||||||| |||| || ||||||||||| |||||||| | |||||||||||||| Sbjct: 367 ggagaggtcctcgtagctggagtacatcttgatgtccaccttcctgaggtagggcgcgcc 308 Query: 558 gtccatgctcacctt 572 |||||||||||||| Sbjct: 307 atccatgctcacctt 293
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 315 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 374 |||||||||||||| | |||||||| || |||||||||||| ||||||||||| || Sbjct: 180 cttcatgatcctcagcctcttgcatgactcagtaaacatctcccaagggacgtctcccac 121 Query: 375 aagcatccagtcgccatccttgtcttc 401 ||||||||||| ||||| |||||||| Sbjct: 120 tagcatccagtctccatctttgtcttc 94
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 775 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 716 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 715 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 656 Query: 383 agtcgccatccttgtcttcgta 404 |||| ||||| ||||| ||||| Sbjct: 655 agtcaccatctttgtcctcgta 634 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 gagaggtccttgtaggtgttgtacatcttgagatccacctt 539 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 509 gagagatccttgtagctggtgtacatcttgaggtcaacctt 469
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 679 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 620 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 619 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 560 Query: 383 agtcgccatccttgtcttcgta 404 |||| ||||| ||||| ||||| Sbjct: 559 agtcaccatctttgtcctcgta 538 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 gagaggtccttgtaggtgttgtacatcttgagatccacctt 539 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 413 gagagatccttgtagctggtgtacatcttgaggtcaacctt 373
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 130362 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 130309 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 129481 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 129422 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 129421 atgctgaccttgac 129408
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 37551 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 37498 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 36670 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 36611 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 36610 atgctgaccttgac 36597
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || ||||| ||||| || ||||| ||||||||||||| | ||||| | | Sbjct: 1288 gcccttggggctagaccaatggcatctgaacctttcatgatcctcagcctcttgcaggta 1229 Query: 343 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcg 402 ||| |||||||||||| ||||| || || || ||||||||||| |||||||| || ||| Sbjct: 1228 tcaataaacatctcccaggggacatcaccgactagcatccagtccccatccttatcctcg 1169 Query: 403 ta 404 || Sbjct: 1168 ta 1167
>gb|AY289603.1| Pinus taeda auxin-induced protein 4 (IAA4) mRNA, complete cds Length = 1231 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| ||| |||||||||||| || | || ||| ||| |||||||||||| ||||||| Sbjct: 685 gcttctgaagccttcatgatccgcactctttggcaggaatcaacaaacatctgccatggg 626 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 || || || ||||||||||| || ||||| || ||||| ||||||| Sbjct: 625 acatcgcctacaagcatccaatctccatctttatcttcataagtag 580 Score = 40.1 bits (20), Expect = 9.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 498 ggagaggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgcc 557 ||||||||| | |||||| ||||||| ||||| |||||||| | || ||||| || || Sbjct: 470 ggagaggtcatgataggtgctgtacattttgaggtccacctttctgagatagggagctcc 411 Query: 558 gtccatgctcac 569 ||||||||||| Sbjct: 410 atccatgctcac 399
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||| || || ||||||||||||||||| |||||||||||||| ||||| Sbjct: 7852776 ctcccatggaacatcgccaacaagcatccagtctccatccttgtcttcataagt 7852723 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 4624577 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 4624620 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 502 aggtccttgtaggtgttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtcc 561 |||||||||||| | ||||| ||||||| |||||||| | |||||||| || || ||| Sbjct: 7851895 aggtccttgtagttcttgtaggtcttgaggtccaccttcctgaggtagggggcaccatcc 7851836 Query: 562 atgctcaccttgac 575 ||||| |||||||| Sbjct: 7851835 atgctgaccttgac 7851822 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 532 tccaccttgcgcaggtagggcgcgccgtc 560 ||||||||||||||||| ||||||||||| Sbjct: 4624858 tccaccttgcgcaggtacggcgcgccgtc 4624886 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 27627750 ccaacaagcatccagtcagcatccttgtcttc 27627781 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 ctcggtctcctcctccttctt 648 ||||||||||||||||||||| Sbjct: 17819691 ctcggtctcctcctccttctt 17819711
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 768 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 709 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 708 tgcccaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 649 Query: 383 agtcgccatccttgtcttcgta 404 |||| ||||| ||||| ||||| Sbjct: 648 agtcaccatctttgtcctcgta 627 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 gagaggtccttgtaggtgttgtacatcttgagatccacctt 539 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 502 gagagatccttgtagctggtgtacatcttgaggtcaacctt 462
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 67.9 bits (34), Expect = 4e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 263 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 322 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 487 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 428 Query: 323 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 382 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 427 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 368 Query: 383 agtcgccatccttgtcttcgta 404 |||| ||||| ||||| ||||| Sbjct: 367 agtcaccatctttgtcctcgta 346 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 gagaggtccttgtaggtgttgtacatcttgagatccacctt 539 ||||| ||||||||| || ||||||||||||| || ||||| Sbjct: 221 gagagatccttgtagctggtgtacatcttgaggtcaacctt 181
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 345 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 724 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 665 Query: 405 agtag 409 ||||| Sbjct: 664 agtag 660
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 735 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 676 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 675 acatcgccaacgagcatccagtcaccatctttgtcctcgta 635
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtcctcgta 580
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 678 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 619 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 618 acatcgccaacgagcatccagtcaccatctttgtcctcgta 578
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 345 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433 Query: 405 agtag 409 ||||| Sbjct: 432 agtag 428
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 702 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 643 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 642 acatcgccaacgagcatccagtcaccatctttgtcctcgta 602
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 345 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||||||| || || || |||||||||||||| || ||||| |||||||| || Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtcttcata 433 Query: 405 agtag 409 ||||| Sbjct: 432 agtag 428
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 |||||| || |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 611 ccatggaacatctccaaccagcatccagtcaccatccttgtcttcataagtag 559
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 |||||| || || |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 95 ctcccagggaacatctccaactagcatccagtctccatccttgtcttcataagtag 40
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1163 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1116
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 918 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 871
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1195 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1148
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||| ||| |||||||| || || ||||||||||||||||||||||| ||||| Sbjct: 649 aacatcttccaggggacgtcgccgacgagcatccagtcgccatccttgtcctcgta 594 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtc 560 |||||||| |||||||||||||||||||| Sbjct: 454 tccaccttccgcaggtagggcgcgccgtc 426
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1151 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1104
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 333 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 216 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 157 Query: 393 cttgtcttcgtaagt 407 || ||||| ||||| Sbjct: 156 tttatcttcataagt 142
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 333 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 507 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 448 Query: 393 cttgtcttcgtaagt 407 || ||||| ||||| Sbjct: 447 tttatcttcataagt 433
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 7251225 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 7251175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 27771425 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 27771366 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 27771365 gaccttcctgaggtagggggctccatccatgctcaccttgaca 27771323 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 4074893 tccaccttgcgcaggtacggcgcgccgtcca 4074923 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatc 381 |||||||||| ||||||||||||||||| Sbjct: 40692256 ctcccatgggtcgtctccaacaagcatc 40692229 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 10312454 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 10312407 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 4074630 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 4074673 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 27772077 ccaacaagcatccagtcagcatccttatcttc 27772046
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 145873 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 145823
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct: 52655 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgta 52605
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>emb|X68215.1|PSPIAA45R P.sativum mRNA for pIAA4/5.1 Length = 1022 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 333 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 |||||| |||| |||||||| |||||||| || |||||||| | |||||| || ||||| Sbjct: 611 tttgcaggaagtcacaaacatgtcccatggaacatctccaactaacatccaatcaccatc 552 Query: 393 cttgtcttcgtaagt 407 ||||||||| ||||| Sbjct: 551 cttgtcttcataagt 537
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 650 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 592 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 452 tccaccttgcgcaggtacggcgcgccgtcca 422
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 695 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 637 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtc 560 ||||||||||||||||| ||||||||||| Sbjct: 497 tccaccttgcgcaggtacggcgcgccgtc 469
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 640 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 582 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 442 tccaccttgcgcaggtacggcgcgccgtcca 412
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 692 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 634 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtc 560 ||||||||||||||||| ||||||||||| Sbjct: 494 tccaccttgcgcaggtacggcgcgccgtc 466
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 450 tccaccttgcgcaggtacggcgcgccgtcca 420
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||||||||||| || || |||||||| ||||||||||||||||| ||||| Sbjct: 475 aaacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtc 425
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 344 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgt 403 |||||||||| | |||||| || ||||| |||||||||||||| ||||| || ||||| | Sbjct: 605 caacaaacattttccatggaacatctcctacaagcatccagtctccatctttatcttcat 546 Query: 404 aagtag 409 |||||| Sbjct: 545 aagtag 540
>gb|AY289602.1| Pinus taeda auxin-induced protein 3 (IAA3) mRNA, complete cds Length = 1236 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 344 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgt 403 |||||||||||| ||||||||| || || | ||||||||| || |||||||| ||||| | Sbjct: 780 caacaaacatctgccatgggacatcgcctataagcatccaatctccatccttatcttcat 721 Query: 404 aagtag 409 |||||| Sbjct: 720 aagtag 715
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||||||||| | || ||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 455 ttgtacatcttcaagtcaaccttccgcaggtacggcgccccgtccatgctcaccttcaca 396 Query: 577 aa 578 || Sbjct: 395 aa 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 344 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||| |||| || || || || ||||||||||| || |||||||||||||| Sbjct: 658 caacaaacatcccccaaggaacatcaccgacaagcatccaatctccatccttgtcttc 601
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||| ||||| || ||||||||||| || ||||||||||| |||||||| Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtcctcgtaagt 589
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 540 aacatttcccatggcacatctccaacaagcatccagtcaccatctttgtc 491
>gb|AY062215.1| Antirrhinum majus auxin-induced AUX/IAA1 mRNA, partial cds Length = 517 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 ||||| |||||||| || |||||||| | |||||| || |||||||||||||| |||||| Sbjct: 464 aacatatcccatggcacatctccaaccaacatccaatctccatccttgtcttcataagta 405 Query: 409 g 409 | Sbjct: 404 g 404
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 304 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 363 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 981 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 922 Query: 364 acgtctccaacaagcatccagtcgccatccttgtcttcgta 404 || || ||||| |||||||||| ||||| ||||| ||||| Sbjct: 921 acatcgccaacgagcatccagttaccatctttgtcctcgta 881
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 352 atctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 |||||||||||||| || |||||||||||||| || ||||| || ||||| |||||| Sbjct: 1092 atctcccatgggacatcgccaacaagcatccaatcaccatctttatcttcataagta 1036
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||| |||||||| || |||||||| |||||||| || |||||||||||||| Sbjct: 611 aacatatcccatggtacatctccaactagcatccaatcaccatccttgtcttc 559
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 |||||||| ||| |||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 393 ttgcatgactcaataaacatctcccaagggacatctccaaccagcatccaatcaccatct 334 Query: 394 ttgtc 398 ||||| Sbjct: 333 ttgtc 329
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 135044 gggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 135087 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 532 tccaccttgcgcaggtagggcgcgccgtc 560 ||||||||||||||||| ||||||||||| Sbjct: 135325 tccaccttgcgcaggtacggcgcgccgtc 135353
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 67621 ctcccacggtacgtctcctacaagcatccagtcgccatctttatcttc 67668 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 cgtttgcatgaagcaacaaacatc 354 |||||||||||| ||||||||||| Sbjct: 67503 cgtttgcatgaatcaacaaacatc 67526
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 575 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 69471 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 69428 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 69663 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 69620
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 334 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 393 |||||||| |||||||||| ||||||||||| || || || ||||||||||| || ||| Sbjct: 683 ttgcatgattcaacaaacatgtcccatgggacatcaccgacgagcatccagtcaccgtcc 624 Query: 394 ttgtcttc 401 || ||||| Sbjct: 623 ttatcttc 616
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||| ||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 623 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 568 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 575 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 419 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 376
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 575 ||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 418 tccaccttgcgcaggtacggcgcgccgtccacggccaccttgac 375 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 610 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 567
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||| ||||| || ||||||||||| |||||||| ||||| Sbjct: 23077 ctcccatgggacatctcccacgagcatccagtcaccatccttatcttc 23030
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 637
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 798
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 759
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 764
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 561 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 502 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 501 gaccttcctgaggtagggggctccatccatgctcaccttgaca 459 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 701 ccaacaagcatccagtcagcatccttatcttc 670
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 5691 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||||||||||||||||||||| Sbjct: 5165 caggtacggcgcgccgtccatgctcacctt 5136
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 136791 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||||||||||||||||||||| Sbjct: 136265 caggtacggcgcgccgtccatgctcacctt 136236 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||| ||||||||||||||||| Sbjct: 123182 caggtacggcgccccgtccatgctcacctt 123211
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 723 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 665
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 551 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 492 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 491 gaccttcctgaggtagggggctccatccatgctcaccttgaca 449
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 ||||| |||||||| || ||||||||||||||||| || |||||||| Sbjct: 1159 aacatatcccatggtacatctccaacaagcatccaatcaccatcctt 1113
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 41636 tccaccttgcgcaggtacggcgcgccgtcca 41666 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 41373 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 41416
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 63480 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 63421 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 63420 gaccttcctgaggtagggggctccatccatgctcaccttgaca 63378 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 64132 ccaacaagcatccagtcagcatccttatcttc 64101
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 532 tccaccttgcgcaggtagggcgcgccgtcca 562 ||||||||||||||||| ||||||||||||| Sbjct: 21864 tccaccttgcgcaggtacggcgcgccgtcca 21894 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Plus Query: 361 gggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| || || |||||||||||||| |||||||| ||||| Sbjct: 21601 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 21644
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgta 36775
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 648 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 589 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 588 gaccttcctgaggtagggggctccatccatgctcaccttgaca 546 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 788 ccaacaagcatccagtcagcatccttatcttc 757
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 759
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 764
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 563 gctgaacatcttctcgagagccatggagaggtcctcatagttagaatacatcttgaggtc 504 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 503 gaccttcctgaggtagggggctccatccatgctcaccttgaca 461 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 703 ccaacaagcatccagtcagcatccttatcttc 672
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 798
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 474 gctgaacatcttgtgcagagcaatggagaggtccttgtaggtgttgtacatcttgagatc 533 |||||||||||| | ||||| ||||||||||||| ||| | ||||||||||| || Sbjct: 574 gctgaacatcttctcgagagccatggagaggtcctcatagctagaatacatcttgaggtc 515 Query: 534 caccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||| | |||||||| || || |||||||||||||||||| Sbjct: 514 gaccttcctgaggtagggggctccatccatgctcaccttgaca 472 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||| ||||| Sbjct: 714 ccaacaagcatccagtcagcatccttatcttc 683
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 |||||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 405 acaaacatctcccatgggacatcacccacgagcatccagtcaccatc 359
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||||||||| | ||||| ||||| ||||| || || || |||||||||||||||||| Sbjct: 711 ttgtacatcttcaagtccactttgcgaaggtaaggtgctccatccatgctcaccttgaca 770 Query: 577 aag 579 ||| Sbjct: 771 aag 773 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 |||||| || |||||||| |||||||| || ||||||||||| || ||||||| Sbjct: 21980 ccatggaacatctccaaccagcatccaatcaccatccttgtcctcataagtag 21928
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||||| ||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 1364 aaacatttcccaagggacatctccaacaagcatccaatcaccatctttgtc 1314
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 596 ccatggaacatctccaaccagcatccagtcaccatctttgtcttcataagt 546
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 535 accttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 371 accttgcggaggtatggcgccccgtccatgctcacctt 334
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 535 accttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 47302 accttgcggaggtatggcgccccgtccatgctcacctt 47265
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 111842 ctcccacggaacatctccaacaagcatccagtcaccatcctt 111883
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 395 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 7963 ctcccacggaacatctccaacaagcatccagtcaccatcctt 7922
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 281 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 340 |||||||||| || || || ||||| || || | |||||||||||||| | ||||||| Sbjct: 1259 tggcccttggggctaggccaatggcatcagagctcttcatgatcctcagcctcttgcatg 1200 Query: 341 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtc 386 ||| |||||||||||| || || || ||||||||||||||||| Sbjct: 1199 tttcaataaacatctcccagggaacatcgccaacaagcatccagtc 1154
>emb|X68216.1|PSIAA45D P.sativum PS-IAA4/5 gene Length = 3976 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||||| || |||||||| | |||||| || |||||||||||||| ||||| Sbjct: 3275 ctcccatggaacatctccaactaacatccaatcaccatccttgtcttcataagt 3222
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 535 accttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 436 accttgcggaggtatggcgccccgtccatgctcacctt 399
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 518 tgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgac 575 |||||||| | || |||||||| | |||||| || ||||||||||||||||| ||||| Sbjct: 590 tgtacatcctcaggtccaccttcctcaggtacggggcgccgtccatgctcactttgac 533
>gb|U18417.1|ATU18417 Arabidopsis thaliana subspecies IAA15 (IAA15) pseudogene Length = 359 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 378 catccagtcgccatccttgtcttcgtaagtagtaacaa 415 |||||| |||||||||||||| |||||||||| ||||| Sbjct: 359 catccaatcgccatccttgtcctcgtaagtagcaacaa 322
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 517 ttgtacatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcaccttgaca 576 ||||||| |||||||||||||| || || || || || ||||||||||||||||| ||| Sbjct: 4871 ttgtacagtttgagatccaccttacgtagatatggtgcaccgtccatgctcaccttcaca 4930 Query: 577 aa 578 || Sbjct: 4931 aa 4932 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 agcatccagtcgccatccttgtctt 400 ||||||||||| ||||||||||||| Sbjct: 4691 agcatccagtcaccatccttgtctt 4715
>ref|NM_104161.2| Arabidopsis thaliana IAA6; transcription factor AT1G52830 (IAA6) mRNA, complete cds Length = 829 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 583 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 527
>ref|NM_100305.2| Arabidopsis thaliana SHY2 (SHORT HYPOCOTYL 2); transcription factor AT1G04240 (SHY2) mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 596 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 537 Query: 409 g 409 | Sbjct: 536 g 536
>ref|XM_464766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagca 379 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>gb|AY064007.1| Arabidopsis thaliana putative auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 1003 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 596 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 537 Query: 409 g 409 | Sbjct: 536 g 536
>gb|AF332393.1| Arabidopsis thaliana clone C00011 (f) auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 570 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 500 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 441 Query: 409 g 409 | Sbjct: 440 g 440
>gb|AF336915.1| Arabidopsis thaliana clone C00013 (h) IAA6 (At1g52830) mRNA, complete cds Length = 570 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 498 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 442
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 50.1 bits (25), Expect = 0.010 Identities = 67/81 (82%) Strand = Plus / Minus Query: 315 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 374 |||||||||||||| || ||||||| ||| |||||||| ||| || || || || || Sbjct: 1020 cttcatgatcctcagccgcttgcatgtctcaataaacatctgccagggcacatcacccac 961 Query: 375 aagcatccagtcgccatcctt 395 |||||||||||| |||||||| Sbjct: 960 aagcatccagtcaccatcctt 940
>emb|BX817970.1|CNS0AE4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 570 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 514
>dbj|AK121870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103P10, full insert sequence Length = 1408 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagca 379 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 |||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1154 aaacatctcccaggggacatcaccgacaagcatccagtcaccatc 1110
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 tccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 482 tccaccttccggaggtatggcgccccgtccatgctcacctt 442
>gb|U18408.1|ATU18408 Arabidopsis thaliana IAA6 (IAA6) gene, complete cds Length = 764 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 518 aaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 462
>gb|U18406.1|ATU18406 Arabidopsis thaliana IAA3 (IAA3) gene, complete cds Length = 1031 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagta 408 |||||||||||||| || || |||| |||||||| || ||||| |||||||| |||||| Sbjct: 585 aacatctcccatggaacatcaccaatgagcatccaatcaccatctttgtcttcataagta 526 Query: 409 g 409 | Sbjct: 525 g 525
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 57582 ctcccaagggacatctccaaccagcatccagtcaccatctttgtc 57538
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||| ||||| || |||||||||||||| || ||||| || ||||| Sbjct: 63 aacatctcccaagggacatcaccaacaagcatccaatctccatctttatcttc 11
>ref|NM_183562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 558 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 511
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Minus Query: 521 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 535 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 484 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 tggcttcggaacccttcatgatcctcaa 329 ||||||| || ||||||||||||||||| Sbjct: 742 tggcttcagagcccttcatgatcctcaa 715
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 95026 ccaacaagcatccagtcagcatccttgtcttc 95057
>gb|AY289601.1| Pinus taeda auxin-induced protein 2 (IAA2) mRNA, complete cds Length = 1774 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 346 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 986 acaaacatctcccatggaacatcgcctacaagcatccaatctccatctttatcttc 931
>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence Length = 117136 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||| || || ||||| |||||||| || |||||||||||||| Sbjct: 95752 ctcccatggaacatcaccaactagcatccaatcaccatccttgtcttc 95799
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Plus Query: 521 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 4388104 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 4388155 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 tggcttcggaacccttcatgatcctcaa 329 ||||||| || ||||||||||||||||| Sbjct: 4387785 tggcttcagagcccttcatgatcctcaa 4387812
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatc 381 |||||||||| ||||||||||||||||| Sbjct: 134234 ctcccatgggtcgtctccaacaagcatc 134207
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtcaccatc 696
>gb|AY085353.1| Arabidopsis thaliana clone 147711 mRNA, complete sequence Length = 783 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||||| ||| || || ||||| || ||||||||||| | ||||||||||||||| Sbjct: 580 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 525
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 19174 ctcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 19127
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Plus Query: 521 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 27953 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 28004 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 tggcttcggaacccttcatgatcctcaa 329 ||||||| || ||||||||||||||||| Sbjct: 27634 tggcttcagagcccttcatgatcctcaa 27661
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 814 ccaacaagcatccagtcagcatccttgtcttc 783
>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19 Length = 87286 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 |||||||||||||| || ||||| |||||||| ||||||| Sbjct: 5914 ccaacaagcatccaatcaccatctttgtcttcataagtag 5875
>emb|X53435.1|ATAUX211 A.thaliana auxin-inducible gene Aux2-11 Length = 1776 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttcgtaagtag 409 |||||||||||||| || ||||| |||||||| ||||||| Sbjct: 1243 ccaacaagcatccaatcaccatctttgtcttcataagtag 1204
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 48.1 bits (24), Expect = 0.039 Identities = 51/60 (85%) Strand = Plus / Minus Query: 348 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 ||||||| |||| || || ||||| ||||||||||| || ||||||||||| || ||||| Sbjct: 836 aaacatcccccaaggaacatctccgacaagcatccaatccccatccttgtcctcataagt 777
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 855 ccaacaagcatccagtcagcatccttgtcttc 824
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 808 ccaacaagcatccagtcagcatccttgtcttc 777
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Minus Query: 521 acatcttgagatccaccttgcgcaggtagggcgcgccgtccatgctcacctt 572 ||||||||||||| ||||| | |||||| || || || |||||||||||||| Sbjct: 535 acatcttgagatcaaccttcctcaggtatggtgccccatccatgctcacctt 484 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 tggcttcggaacccttcatgatcctcaa 329 ||||||| || ||||||||||||||||| Sbjct: 742 tggcttcagagcccttcatgatcctcaa 715
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 803 ccaacaagcatccagtcagcatccttgtcttc 772
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 ccaacaagcatccagtcgccatccttgtcttc 401 ||||||||||||||||| ||||||||||||| Sbjct: 816 ccaacaagcatccagtcagcatccttgtcttc 785
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 392 ||||||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 1206 aacatctcccaagggacatcaccaacgagcatccagtcaccatc 1163
>ref|NM_100334.2| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.2 mRNA, complete cds Length = 1198 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 774 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 724
>ref|NM_179258.1| Arabidopsis thaliana IAA12 (BODENLOS); transcription factor AT1G04550 (IAA12) transcript variant AT1G04550.1 mRNA, complete cds Length = 1352 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 855 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 805
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 831 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 772 Query: 399 ttc 401 ||| Sbjct: 771 ttc 769
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 355 tcccatgggacgtctccaacaagcatc 381 ||||||||| ||||||||||||||||| Sbjct: 2264 tcccatgggtcgtctccaacaagcatc 2238
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 349 aacatctcccatgggacgtctccaacaagcatcca 383 ||||||||||| || ||||| |||||||||||||| Sbjct: 53 aacatctcccaaggaacgtcgccaacaagcatcca 19
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 678 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 619 Query: 399 ttc 401 ||| Sbjct: 618 ttc 616
>gb|AF332398.1| Arabidopsis thaliana auxin-induced protein, IAA12 (At1g04550) mRNA, complete cds Length = 720 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 606 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 556
>gb|AY096535.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 751 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 606 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 556
>gb|AY065240.1| Arabidopsis thaliana auxin-induced protein IAA12 (At1g04550) mRNA, complete cds Length = 1187 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 748 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 698
>emb|AJ627255.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA20 transcriptional repressor (putative IAA20 gene) Length = 561 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 355 tcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 514 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 468
>gb|AY099670.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 1091 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 817 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 758 Query: 399 ttc 401 ||| Sbjct: 757 ttc 755
>gb|AF332397.1| Arabidopsis thaliana clone C00018 (e) early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 678 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 619 Query: 399 ttc 401 ||| Sbjct: 618 ttc 616
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 35092661 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 35092711
>gb|AY088042.1| Arabidopsis thaliana clone 40608 mRNA, complete sequence Length = 1194 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 774 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 724
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 153002 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 153052
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 354 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgta 404 |||||| || || |||||||| ||||||||||| |||||| |||| ||||| Sbjct: 65824 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtcctcgta 65874
>dbj|AK118377.1| Arabidopsis thaliana At4g28640 mRNA for putative early auxin-inducible protein 11 (IAA11), complete cds, clone: RAFL19-64-E04 Length = 1093 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 817 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 758 Query: 399 ttc 401 ||| Sbjct: 757 ttc 755
>emb|AJ249996.1|LES249996 Lycopersicon esculentum partial mRNA for auxin-responsive protein (ctd1 gene) Length = 454 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 283 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 342 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 87 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 28 Query: 343 gcaacaaacatctcccatgggac 365 | | |||||||||||| ||||| Sbjct: 27 tcgataaacatctcccaggggac 5
>dbj|AK103865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F09, full insert sequence Length = 860 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 355 tcccatgggacgtctccaacaagcatccagtcgccatccttgtcttc 401 |||||||||||||| ||||| | ||||||||| || |||| |||||| Sbjct: 500 tcccatgggacgtccccaaccatcatccagtccccgtcctggtcttc 454
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 355 tcccatgggacgtctccaacaagcatc 381 ||||||||| ||||||||||||||||| Sbjct: 2486 tcccatgggtcgtctccaacaagcatc 2460
>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174302 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 45 ctgggacacatggtagggaacatcaca 71 |||||||||| |||||||||||||||| Sbjct: 127135 ctgggacacagggtagggaacatcaca 127109
>gb|U18414.1|ATU18414 Arabidopsis thaliana IAA12 (IAA12) gene, complete cds Length = 1125 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 705 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 655
>gb|U18413.1|ATU18413 Arabidopsis thaliana IAA11 (IAA11) gene, complete cds Length = 998 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 339 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 398 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 721 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 662 Query: 399 ttc 401 ||| Sbjct: 661 ttc 659
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Plus Query: 357 ccatgggacgtctccaacaagcatccagtcgccatccttgtcttcgtaagt 407 |||||| || ||||||||||||||||| || || ||||| ||||| ||||| Sbjct: 91542 ccatggaacatctccaacaagcatccaatccccttccttatcttcataagt 91592
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 355 tcccatgggacgtctccaacaagcatc 381 ||||||||| ||||||||||||||||| Sbjct: 2228 tcccatgggtcgtctccaacaagcatc 2202
>gb|AY830453.1| Petromyzon marinus SoxE1 (SoxE1) mRNA, complete cds Length = 2434 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 596 ccagcagcagcggtagcagcaggctgctgc 625 ||||||||||| | |||||||||||||||| Sbjct: 1384 ccagcagcagcagcagcagcaggctgctgc 1413
>ref|XM_640264.1| Dictyostelium discoideum Ras guanine nucleotide exchange factor (DDB0185195), partial mRNA Length = 4671 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 633 tctcctcctccttcttgatcttcacc 658 ||||||||||||||||| |||||||| Sbjct: 676 tctcctcctccttcttgttcttcacc 701
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||| ||||||||||||||||| Sbjct: 552 caggtacggcgccccgtccatgctcacctt 523
>ref|XM_360862.1| Magnaporthe grisea 70-15 predicted protein (MG03405.4) partial mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 592 ggcgccagcagcagcggtagcagcag 617 ||||||||||||||||||||| |||| Sbjct: 427 ggcgccagcagcagcggtagcggcag 452
>ref|XM_808746.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508569.120) partial mRNA Length = 1581 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 592 ggcgccagcagcagcggtagcagcag 617 ||||||||||| |||||||||||||| Sbjct: 538 ggcgccagcagtagcggtagcagcag 563
>gb|AY160096.1| Dictyostelium discoideum nucleotide exchange factor RasGEF G (gefG) gene, complete cds Length = 7554 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 633 tctcctcctccttcttgatcttcacc 658 ||||||||||||||||| |||||||| Sbjct: 1999 tctcctcctccttcttgttcttcacc 2024
>emb|AL590009.10| Human DNA sequence from clone RP11-181P4 on chromosome 6 Contains the WASF1 gene for WAS protein family member 1 and part of the FLJ31482 gene, complete sequence Length = 153046 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ggacacatggtagggaacatcacata 73 ||||||||||| |||||||||||||| Sbjct: 123529 ggacacatggtggggaacatcacata 123554
>emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 153211 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ggacacatggtagggaacatcacata 73 ||||||||||||||||||| |||||| Sbjct: 32847 ggacacatggtagggaacaacacata 32872
>emb|AL136367.10| Human DNA sequence from clone RP11-58O2 on chromosome 9q21.33-22.2, complete sequence Length = 76831 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 442 atcttcccctcattcccagttg 463 |||||||||||||||||||||| Sbjct: 47645 atcttcccctcattcccagttg 47624
>ref|XM_785179.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8465-PA, isoform A (LOC585349), mRNA Length = 3768 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 580 ttggaagccgttggcgccagcagcag 605 ||||||||||||||| |||||||||| Sbjct: 2895 ttggaagccgttggcaccagcagcag 2870
>tpg|BK003075.1| TPA: TPA_inf: Drosophila melanogaster HDC17998 (HDC17998) gene, complete cds Length = 910 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 634 ctcctcctccttcttgatcttc 655 |||||||||||||||||||||| Sbjct: 674 ctcctcctccttcttgatcttc 653
>gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, complete sequence Length = 169597 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 618 gctgctgcttctcggtctcctcctccttct 647 ||||||||||||| ||||||||||||||| Sbjct: 61441 gctgctgcttctccttctcctcctccttct 61470
>gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O3, complete sequence Length = 226416 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cacatggtagggaacatcacat 72 |||||||||||||||||||||| Sbjct: 87455 cacatggtagggaacatcacat 87476
>gb|AC153625.2| Mus musculus 6 BAC RP23-277O13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 175711 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 618 gctgctgcttctcggtctcctcctccttct 647 ||||||||||||| ||||||||||||||| Sbjct: 118431 gctgctgcttctccttctcctcctccttct 118402
>gb|AC019018.9|AC019018 Arabidopsis thaliana chromosome 1 BAC F14G24 genomic sequence, complete sequence Length = 126253 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 tctccaacaagcatccagtcgccatccttgtcttcgta 404 ||||| || ||||||||||| | ||||||||||||||| Sbjct: 41961 tctccgacgagcatccagtctctatccttgtcttcgta 41998
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 633 tctcctcctccttcttgatcttcacc 658 ||||||||||||||||| |||||||| Sbjct: 37354 tctcctcctccttcttgttcttcacc 37379
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 634 ctcctcctccttcttgatcttc 655 |||||||||||||||||||||| Sbjct: 45922 ctcctcctccttcttgatcttc 45901
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 543 caggtagggcgcgccgtccatgctcacctt 572 |||||| ||||| ||||||||||||||||| Sbjct: 554 caggtacggcgccccgtccatgctcacctt 525
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 634 ctcctcctccttcttgatcttc 655 |||||||||||||||||||||| Sbjct: 40376 ctcctcctccttcttgatcttc 40355
>gb|AC162889.2| Mus musculus chromosome 7, clone RP24-373A4, complete sequence Length = 136728 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cacatggtagggaacatcacat 72 |||||||||||||||||||||| Sbjct: 135234 cacatggtagggaacatcacat 135213
>ref|NM_112422.2| Arabidopsis thaliana IAA19; transcription factor AT3G15540 (IAA19) mRNA, complete cds Length = 968 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 376 agcatccagtcgccatccttgtcttcgta 404 ||||||||||| ||||| ||||||||||| Sbjct: 558 agcatccagtctccatctttgtcttcgta 530 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,145,289 Number of Sequences: 3902068 Number of extensions: 7145289 Number of successful extensions: 189648 Number of sequences better than 10.0: 572 Number of HSP's better than 10.0 without gapping: 582 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 187289 Number of HSP's gapped (non-prelim): 2331 length of query: 689 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 666 effective length of database: 17,143,297,704 effective search space: 11417436270864 effective search space used: 11417436270864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
