ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11k19 |
|---|---|
| Clone Library Name | barley_pub |
>PEX2_ARATH (Q9CA86) Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2)| (Pex2p) Length = 333 Score = 149 bits (376), Expect = 5e-36 Identities = 69/103 (66%), Positives = 79/103 (76%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPFSKDKSASSSGDEANCPICVSSPSIP 384 EYMNRQLVWNEFSEM LNSS+VK L PF+KDKS+S+ D CPIC P+IP Sbjct: 228 EYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIP 287 Query: 383 FVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRHGSS 255 F+ALPCQHRYCYYC+RTR A+ +S+RC RCNE VVAIQR G S Sbjct: 288 FIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVS 330
>PEX2_RAT (P24392) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 57.8 bits (138), Expect = 2e-08 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 8/106 (7%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFL----LPFSK----DKSASSSGDEANCPI 408 EYMNR+L+W+ F+E +N +K L +P + D + SSG E C + Sbjct: 189 EYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSSWCIPLTSTAGSDSTLGSSGKE--CAL 246 Query: 407 CVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 C P++P + C+H +CYYC+++ + C +C V ++Q Sbjct: 247 CGEWPTMPHT-IGCEHVFCYYCVKSSFLFDMYFTCPKCGTEVHSVQ 291
>PEX2_MOUSE (P55098) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 56.6 bits (135), Expect = 5e-08 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 8/106 (7%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPF--------SKDKSASSSGDEANCPI 408 EYMNR+L+W+ F+E +N +K L + D + SSG E C + Sbjct: 189 EYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCTLCTGAAGHDSTLGSSGKE--CAL 246 Query: 407 CVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 C P++P + C+H +CYYC+++ + C +C V ++Q Sbjct: 247 CGEWPTMPHT-IGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQ 291
>PEX2_CRIGR (Q06438) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 304 Score = 56.6 bits (135), Expect = 5e-08 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 8/106 (7%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPF--------SKDKSASSSGDEANCPI 408 +YMNR+L+W+ F+E +N K L + S D + +SSG E C + Sbjct: 188 DYMNRELLWHGFAEFLIFLLPLINIQKFKAKLSSWCIPLTGAASSDSALASSGKE--CAL 245 Query: 407 CVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 C P++P + C+H +CYYC+++ + C +C V ++Q Sbjct: 246 CGEWPTMPHT-IGCEHVFCYYCVKSSFLFDMYFTCPKCGIEVHSVQ 290
>PEX2_HUMAN (P28328) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72) Length = 305 Score = 53.9 bits (128), Expect = 3e-07 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 8/106 (7%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPF--------SKDKSASSSGDEANCPI 408 EYMNR+L+W+ F+E +N +K L + + D + ++SG E C + Sbjct: 189 EYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLATSGKE--CAL 246 Query: 407 CVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 C P++P + C+H +CY+C ++ + C +C V ++Q Sbjct: 247 CGEWPTMPHT-IGCEHIFCYFCAKSSFLFDVYFTCPKCGTEVHSLQ 291
>PEX2_YEAST (P32800) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein PAS5) (Protein CRT1) Length = 271 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPFSKD--KSASSSGDEANCPICVSSPS 390 EY NRQL+WN E+ N+ K+ LL F K +S S++ + CP C P+ Sbjct: 177 EYQNRQLLWNALLELFS------NTLLTKRGLLTFVKKPPRSRSTTTYKTVCPRCGGFPT 230 Query: 389 IPFVALPCQHRYCYYCL 339 P+ C+ YCY C+ Sbjct: 231 NPYQIACCRANYCYVCV 247
>TRI54_BOVIN (Q58D15) Tripartite motif protein 54| Length = 366 Score = 43.5 bits (101), Expect = 4e-04 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL-----------RTRSAATSS----YRCARCNEVV 282 CPIC+ S P V LPCQH C C ++RS+ T S +RC C V Sbjct: 26 CPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRSSTTVSSGGRFRCPSCRHEV 85 Query: 281 VAIQRHG 261 V + RHG Sbjct: 86 V-LDRHG 91
>TRI55_HUMAN (Q9BYV6) Tripartite motif-containing 55 (Muscle-specific RING| finger protein 2) (MuRF2) (MURF-2) (RING finger protein 29) Length = 548 Score = 42.7 bits (99), Expect = 7e-04 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 16/83 (19%) Frame = -3 Query: 461 FSKDKSASSSGD-EANCPICVSSPSIPFVALPCQHRYCYYC-----------LRTRSAAT 318 FSK++ + + + CPIC+ + P V LPCQH C C L TR T Sbjct: 10 FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTT 69 Query: 317 SS----YRCARCNEVVVAIQRHG 261 + +RC C VV + RHG Sbjct: 70 MASGGRFRCPSCRHEVV-LDRHG 91
>TRI55_RAT (Q5PQN5) Tripartite motif-containing 63 (Muscle-specific RING| finger protein 2) (MuRF2) (MURF-2) (RING finger protein 29) Length = 545 Score = 42.4 bits (98), Expect = 0.001 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 16/83 (19%) Frame = -3 Query: 461 FSKDKSASSSGD-EANCPICVSSPSIPFVALPCQHRYCYYC-----------LRTRSAAT 318 FSK++ + + + CPIC+ + P V LPCQH C C L TR T Sbjct: 10 FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTT 69 Query: 317 ----SSYRCARCNEVVVAIQRHG 261 +RC C VV + RHG Sbjct: 70 VASGGRFRCPSCRHEVV-LDRHG 91
>TRI54_RAT (Q5XIH6) Tripartite motif protein 54 (RING finger protein 30)| Length = 364 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL-----------RTRSAATSS----YRCARCNEVV 282 CPIC+ S P V LPCQH C C ++R + T S +RC C V Sbjct: 26 CPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEV 85 Query: 281 VAIQRHG 261 V + RHG Sbjct: 86 V-LDRHG 91
>TRI54_MOUSE (Q9ERP3) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 366 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL-----------RTRSAATSS----YRCARCNEVV 282 CPIC+ S P V LPCQH C C ++R + T S +RC C V Sbjct: 26 CPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEV 85 Query: 281 VAIQRHG 261 V + RHG Sbjct: 86 V-LDRHG 91
>TRI54_PONPY (Q5REJ9) Tripartite motif protein 54| Length = 358 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL-----------RTRSAATSS----YRCARCNEVV 282 CPIC+ S P V LPCQH C C ++R + T S +RC C V Sbjct: 26 CPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEV 85 Query: 281 VAIQRHG 261 V + RHG Sbjct: 86 V-LDRHG 91
>TRI54_HUMAN (Q9BYV2) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 358 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL-----------RTRSAATSS----YRCARCNEVV 282 CPIC+ S P V LPCQH C C ++R + T S +RC C V Sbjct: 26 CPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEV 85 Query: 281 VAIQRHG 261 V + RHG Sbjct: 86 V-LDRHG 91
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 40.0 bits (92), Expect = 0.005 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRHGSS 255 +CPIC+ + LPC H++C C++ R TS+ C CN V +I H S Sbjct: 45 DCPICLDVAATEAQTLPCMHKFCLDCIQ-RWTLTST-ACPLCNARVTSILHHVDS 97
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 40.0 bits (92), Expect = 0.005 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL 339 CPIC+ PS +ALPC H +CY C+ Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCI 33
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 40.0 bits (92), Expect = 0.005 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCL 339 CPIC+ PS +ALPC H +CY C+ Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCI 33
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 39.7 bits (91), Expect = 0.006 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -3 Query: 431 GDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 G+ CPIC+ S P V PC HR C CL T + S C C ++ Sbjct: 1035 GNSKECPICLESADDP-VLTPCAHRMCRECLLTSWRSPSCGLCPICRTIL 1083
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 38.9 bits (89), Expect = 0.010 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = -3 Query: 470 LLPFSKDKSASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYR 306 +LP +K S + S + C IC+ + P V+LPC+H +CY C+ + A+ R Sbjct: 13 MLPTNKKASETCSNTAPSLTVPECAICLQTCVHP-VSLPCKHVFCYLCV--KGASWLGKR 69 Query: 305 CARCNEVV 282 CA C + + Sbjct: 70 CALCRQEI 77
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 38.9 bits (89), Expect = 0.010 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -3 Query: 449 KSASSSG------DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNE 288 K+ASS G +E CP+CV P V + C H +C C+ SS+ C C E Sbjct: 128 KNASSLGAAGDFAEELTCPLCVELFKDP-VMVACGHNFCRSCIDKAWEGQSSFACPECRE 186 Query: 287 VV 282 + Sbjct: 187 SI 188
>TRI63_HUMAN (Q969Q1) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) (RING finger protein 28) (Striated muscle RING zinc finger protein) (Iris RING finger protein) Length = 353 Score = 38.9 bits (89), Expect = 0.010 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYC-------------YYCLRTRSAATSS--YRCARCNEVV 282 CPIC+ + P V LPCQH C Y+ R S + S +RC C V Sbjct: 23 CPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRCPTCRHEV 82 Query: 281 VAIQRHG 261 + + RHG Sbjct: 83 I-MDRHG 88
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 38.9 bits (89), Expect = 0.010 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRHGSS*F 249 ++ CP+C S P V L C H +C +C+ + S++ C C EV+ + Sbjct: 158 EDLTCPLCRSLFKEP-VILECGHNFCKHCIDKSWESASAFSCPECKEVLTERK------- 209 Query: 248 YLDSRILA 225 Y +R+LA Sbjct: 210 YTTNRVLA 217
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 38.9 bits (89), Expect = 0.010 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = -3 Query: 470 LLPFSKDKSASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYR 306 +LP +K + S S + C IC+ + P V+LPC+H +CY C+ + A+ R Sbjct: 15 MLPTNKKANESCSNTAPSLTVPECAICLQTCVHP-VSLPCKHVFCYLCV--KGASWLGKR 71 Query: 305 CARCNEVV 282 CA C + + Sbjct: 72 CALCRQEI 79
>TRI63_MOUSE (Q38HM4) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) (Muscle RING finger protein 1) Length = 350 Score = 38.9 bits (89), Expect = 0.010 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSY---------------RCARCNEVV 282 CPIC+ + P V LPCQH C C A + Y RC C V Sbjct: 23 CPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFRCPSCRHEV 82 Query: 281 VAIQRHG 261 + + RHG Sbjct: 83 I-MDRHG 88
>TRI63_RAT (Q91Z63) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) Length = 351 Score = 38.9 bits (89), Expect = 0.010 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 15/67 (22%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSY---------------RCARCNEVV 282 CPIC+ + P V LPCQH C C A + Y RC C V Sbjct: 23 CPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTNRGGSVSMSGGRFRCPSCRHEV 82 Query: 281 VAIQRHG 261 + + RHG Sbjct: 83 I-MDRHG 88
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 38.1 bits (87), Expect = 0.017 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNE 288 CPIC+ P + LPCQH +CY CL S A + +R +C E Sbjct: 43 CPICLDRYKQPKL-LPCQHTFCYPCL--ESCADTLHRNLKCPE 82
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 37.7 bits (86), Expect = 0.023 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = -3 Query: 470 LLPFSKDKSASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYR 306 +LP ++ + S S + C IC+ + P V+LPC+H +CY C+ + A+ R Sbjct: 13 MLPTNRKANESCSNTAPSLTVPECAICLQTCVHP-VSLPCKHVFCYLCV--KGASWLGKR 69 Query: 305 CARCNEVV 282 CA C + + Sbjct: 70 CALCRQEI 77
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 37.7 bits (86), Expect = 0.023 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = -3 Query: 470 LLPFSKDKSASSSGDEAN-----CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYR 306 +LP ++ + S S + C IC+ + P V+LPC+H +CY C+ + A+ R Sbjct: 14 MLPTNRKANESCSNTAPSLTVPECAICLQTCVHP-VSLPCKHVFCYLCV--KGASWLGKR 70 Query: 305 CARCNEVV 282 CA C + + Sbjct: 71 CALCRQEI 78
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 37.7 bits (86), Expect = 0.023 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 294 S +S + C IC+S+ S +PC H +C+ C+R ++ + RC Sbjct: 9 SGTSDASDNTCTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQCPLCRC 59
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 +A +E CP+CV P V + C H +C C+ SS+ C C E + Sbjct: 136 AAGDFAEELTCPLCVELFKDP-VMVACGHNFCRSCIDKVWEGQSSFACPECKESI 189
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 S SS DE NCPIC + P V + C H +C CL Sbjct: 6 SVSSLADEVNCPICQGTLREP-VTIDCGHNFCCVCL 40
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 37.4 bits (85), Expect = 0.029 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 18/80 (22%) Frame = -3 Query: 479 KKFLLPFSKDKSASSSGDEAN------------CPICVSSPSIPFVALPCQHRYCYYCLR 336 +KF K+K ++ G + N C IC+ + + AL C H +C+ C++ Sbjct: 222 EKFNNKLKKEKKENNGGSDRNLDENSLFHPTFQCSICLENKNPS--ALFCGHLFCWTCIQ 279 Query: 335 ------TRSAATSSYRCARC 294 T SA+TSS RC +C Sbjct: 280 EHAVAATSSASTSSARCPQC 299
>PEX2_PODAN (P51021) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein CAR1) Length = 554 Score = 36.6 bits (83), Expect = 0.050 Identities = 31/139 (22%), Positives = 46/139 (33%), Gaps = 45/139 (32%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSS-----------SVKKFLLPFSKDKSASSSGD--- 426 EY+NRQLVW+ F+E + + KK + + + G+ Sbjct: 301 EYLNRQLVWHAFTEFLLFVLPLVGINRWRRWLARTWRKTKKIMSTTGGEGAEEKKGEFAF 360 Query: 425 --EANCPICVSSPSI---------------------------PFVALPCQHRYCYYCLRT 333 E C IC + P+ +PC YC+ CL T Sbjct: 361 LPERTCAICYQDQNQATNENELMAAATSKTGVVGSAQTDVTNPYETIPCGCVYCFVCLAT 420 Query: 332 R--SAATSSYRCARCNEVV 282 R + C RC E+V Sbjct: 421 RIEREEGEGWNCLRCGELV 439
>TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45| Length = 580 Score = 36.2 bits (82), Expect = 0.066 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Frame = -3 Query: 488 SSVKKFLLPFS---KDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 S ++K LL F +D +AS S + +CP C+ +P + LPC H C CL Sbjct: 2 SEIRKPLLGFVHKLQDANASGSSGKTHCPTCLRLFKVPRL-LPCLHTVCTTCL 53
>TRIM8_MOUSE (Q99PJ2) Tripartite motif protein 8 (RING finger protein 27)| (Glioblastoma-expressed RING finger protein) Length = 551 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSS-YRCARCNE 288 +E CPIC+ P V LPC+H +C C+ A S RC CN+ Sbjct: 11 EELICPICLHVFVEP-VQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQ 57
>TRIM8_HUMAN (Q9BZR9) Tripartite motif protein 8 (RING finger protein 27)| (Glioblastoma-expressed RING finger protein) Length = 551 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSS-YRCARCNE 288 +E CPIC+ P V LPC+H +C C+ A S RC CN+ Sbjct: 11 EELICPICLHVFVEP-VQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQ 57
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 35.8 bits (81), Expect = 0.086 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 S +S DE NCPIC + P V + C H +C CL Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACL 40
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 35.8 bits (81), Expect = 0.086 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYC-----YYCLRTRSAATSSYRCARCNE 288 S +S DE NCPIC + P V + C H +C YC + S C C E Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRGCLTRYCEIPGPESEESLSCPLCKE 62
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 35.8 bits (81), Expect = 0.086 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 S +S DE NCPIC + P V + C H +C CL Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACL 40
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 35.8 bits (81), Expect = 0.086 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Frame = -3 Query: 491 SSSVKKFLLPFSKDKSASSSGDEAN---CPICVSSPSIPFVALPCQHRYCYYCLRTRSAA 321 SSS K+ LL + +S D++N CPIC ++ C H +CY C+ + Sbjct: 110 SSSRKRPLLVPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMT-KCGHSFCYKCI--HQSL 166 Query: 320 TSSYRCARCNEVVVAIQRHGSS*FYLDSRILAQ 222 + RC +CN VV I H F ++ IL Q Sbjct: 167 EDNNRCPKCNYVVDNID-HLYPNFLVNELILKQ 198
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 35.4 bits (80), Expect = 0.11 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = -3 Query: 434 SGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 S D C IC+ P LPC H YC CL RC C E+V Sbjct: 15 SSDFLACKICLEQLHTP-KTLPCLHTYCQDCLAQLDIG-GQVRCPECREIV 63
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -3 Query: 431 GDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 G++ CPIC+ + V PC HR C CL ++S C C V Sbjct: 789 GEQGECPICLEALE-DAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTV 837
>TRI56_HUMAN (Q9BRZ2) Tripartite motif protein 56 (RING finger protein 109)| Length = 755 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/51 (39%), Positives = 22/51 (43%) Frame = -3 Query: 434 SGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 S D C IC+ P LPC H YC CL + A RC C E V Sbjct: 15 SSDFLACKICLEQLRAP-KTLPCLHTYCQDCL-AQLADGGRVRCPECRETV 63
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 35.0 bits (79), Expect = 0.15 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL-RTRSAATSSYRCARCNEVVVA 276 +E +C IC+ P V PC H +C CL T + S Y C +C V A Sbjct: 9 EELSCSICLEPFKEP-VTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQA 59
>YWZ6_CAEEL (Q11096) Hypothetical RING finger protein C02B8.6 in chromosome X| Length = 347 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 294 C IC ++P+ P V L C H +CY C++ S CA C Sbjct: 5 CTICHNTPNRP-VRLDCNHEFCYICIK-GSIQNDMLNCAVC 43
>PSH1_YEAST (Q12161) RING finger protein PSH1 (POB3/SPT16 histone-associated| protein 1) Length = 406 Score = 35.0 bits (79), Expect = 0.15 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATS--SYRCARCNEVVVAI 273 C IC +P + PC H YCY CL T A+ + C +C + I Sbjct: 30 CSICHDYMFVPMMT-PCGHNYCYGCLNTWFASNTQKELACPQCRSDITTI 78
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 34.7 bits (78), Expect = 0.19 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL-RTRSAATSSYRCARCNEV 285 +E +C +C+ P V PC H +C CL T YRC +C +V Sbjct: 9 EELSCSVCLELFKEP-VTTPCGHNFCTSCLDETWVVQGPPYRCPQCRKV 56
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 34.7 bits (78), Expect = 0.19 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSA-ATSSYRCARCNEVV 282 D+ CPIC+ P + L C H YC CL + S S RC C + V Sbjct: 12 DQLQCPICLEVFKEPLM-LQCGHSYCKNCLDSLSEHLDSELRCPVCRQSV 60
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 34.7 bits (78), Expect = 0.19 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Frame = -3 Query: 491 SSSVKKFLLPFSKDKSASSSGDEAN---CPICVSSPSIPFVALPCQHRYCYYCLRTRSAA 321 S S K+ LL + +S D++N CPIC ++ C H +CY C+ + Sbjct: 108 SGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMT-KCGHSFCYKCI--HQSL 164 Query: 320 TSSYRCARCNEVVVAIQRHGSS*FYLDSRILAQ 222 + RC +CN VV I H F ++ IL Q Sbjct: 165 EDNNRCPKCNYVVDNID-HLYPNFLVNELILKQ 196
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 33.9 bits (76), Expect = 0.33 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = -3 Query: 479 KKFLLPFSKDKSASSSG------DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAAT 318 KK PF ++ +SSS DE C IC + V C + YC C+RT + Sbjct: 233 KKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES 292 Query: 317 SSYRCARCNE 288 + C C++ Sbjct: 293 DEHTCPTCHQ 302
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 33.9 bits (76), Expect = 0.33 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Frame = -3 Query: 479 KKFLLPFSKDKSASSSG------DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAAT 318 KK PF ++ +SSS DE C IC + V C + YC C+RT + Sbjct: 232 KKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES 291 Query: 317 SSYRCARCNE 288 + C C++ Sbjct: 292 DEHTCPTCHQ 301
>RFP2_MOUSE (Q9CYB0) Ret finger protein 2 (Putative tumor suppressor RFP2)| (Tripartite motif-containing protein 13) Length = 407 Score = 33.1 bits (74), Expect = 0.56 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 8/55 (14%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL--------RTRSAATSSYRCARCNE 288 ++ CPIC S P V LPC H +C CL R S ++C C + Sbjct: 6 EDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRK 59
>PEX2_PICPA (Q01964) Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal| protein PER6) Length = 461 Score = 33.1 bits (74), Expect = 0.56 Identities = 34/134 (25%), Positives = 44/134 (32%), Gaps = 42/134 (31%) Frame = -3 Query: 563 EYMNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLP------------FSKDKSASSSGDEA 420 E+ NRQLVWN +E L+ K L+ +D SS E Sbjct: 220 EFQNRQLVWNTLTEFIVFILPALSVPKFTKSLVSSITGTSPKSSQVTDEDLKVFSSLPER 279 Query: 419 NCPICVS-------------SPSIPFVALP----CQHRYCYYCLRT-------------R 330 C IC S + V P C H YCY C+ + + Sbjct: 280 VCAICFQNSQNSDSGAQNDISLNDTLVTNPYETTCGHIYCYVCILSKLQIFKEEGKNLPK 339 Query: 329 SAATSSYRCARCNE 288 S + C RCNE Sbjct: 340 SDPNKYWHCLRCNE 353
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 33.1 bits (74), Expect = 0.56 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSA-ATSSYRCARCNEVV 282 D CP+C+ P + L C H YC CL + S S RC C + V Sbjct: 12 DRLQCPVCLEVFKEPLM-LQCGHSYCKGCLLSLSRHLDSELRCPVCRQEV 60
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) (RING finger protein 76) Length = 513 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCL-RTRSAATSSYRCARCNEVVVAIQRH 264 E CP+C+ + P + L C H C CL R A ++ C +C E QRH Sbjct: 13 ETTCPVCLQYFAEPMM-LDCGHNICCACLARCWGTAETNVSCPQCRETFP--QRH 64
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 CPIC+ + V PC HR+C C+ +S + ++C NE+++ Q Sbjct: 70 CPICLMALR-EAVQTPCGHRFCKACI-IKSIRDAGHKCPVDNEILLENQ 116
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 32.7 bits (73), Expect = 0.73 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCL------RTRSAATSSYRCARC 294 +CPIC+ P V LPC H +C CL R S A ARC Sbjct: 8 SCPICLEPLREP-VTLPCGHNFCLACLGALWPHRGASGAGGPGGAARC 54
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 32.7 bits (73), Expect = 0.73 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL 339 +EA C IC+S + P V++ C H YC+ C+ Sbjct: 12 EEATCSICLSLMTNP-VSINCGHSYCHLCI 40
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 32.7 bits (73), Expect = 0.73 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQ 270 CPIC+ + V PC HR+C C+ +S + ++C NE+++ Q Sbjct: 70 CPICLMALR-EAVQTPCGHRFCKACI-IKSIRDAGHKCPVDNEILLENQ 116
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 32.7 bits (73), Expect = 0.73 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 455 KDKSASSSGDEANCPICVS--SPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVV 282 ++ S GD C +C +P + PC HR+C C++T ++ C CN + Sbjct: 105 REDGGSDEGDV--CAVCTDEIAPHLRCDTFPCMHRFCIPCMKTWMQLRNT--CPLCNAKL 160 Query: 281 V 279 V Sbjct: 161 V 161
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 32.3 bits (72), Expect = 0.95 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCLRT----RSAATSS-----YRCARCNE 288 +CPIC+ P V LPC H +C CL RSA + RC C E Sbjct: 8 SCPICLEPLREP-VTLPCGHNFCLACLGALWPHRSAGGTGGSGGPARCPLCQE 59
>ZN645_MACFA (Q4R361) Zinc finger protein 645| Length = 422 Score = 32.3 bits (72), Expect = 0.95 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = -3 Query: 455 KDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYR-CARCNEVVV 279 KD S D+ + PI + IP C+H +CY C Y+ C RC+ V+ Sbjct: 46 KDDSPIHFCDKCDLPIKIYGRIIP-----CKHAFCYNCANLYDKI--GYKICPRCSYPVL 98 Query: 278 AIQRHGSS*FYLDSRILAQTRT 213 I+ H ++ S + RT Sbjct: 99 RIEEHKRGSVFMCSVVQGCKRT 120
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 32.3 bits (72), Expect = 0.95 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 +A G++ +CPIC+S P+ + C H +C C+ Sbjct: 625 AALQDGEDFDCPICISPPT-NIIITRCAHIFCRACI 659
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 32.0 bits (71), Expect = 1.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL 339 ++ CPIC S P V LPC H +C CL Sbjct: 6 EDLTCPICCSLFDDPRV-LPCSHNFCKKCL 34
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 93
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 93
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 93
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 93
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 37 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 92
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 9 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 64
>ZN645_HUMAN (Q8N7E2) Zinc finger protein 645| Length = 425 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -3 Query: 374 LPCQHRYCYYCLRTRSAATSSYR-CARCNEVVVAIQRHGSS*FYLDSRILAQTRT 213 +PC+H +CY+C Y+ C RC V+ I+ H ++ S + RT Sbjct: 71 IPCKHAFCYHCANLYDKV--GYKVCPRCRYPVLRIEAHKRGSVFMCSIVQQCKRT 123
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 36 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 91
>NOT4_YEAST (P34909) General negative regulator of transcription subunit 4| Length = 587 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Frame = -3 Query: 452 DKSASSSGDEANCPICVSSPSIP---FVALPCQHRYCYYCLRT-RSAATSSYRCARC 294 D S S +E CP+C+ I F PC ++ C +C R + RC C Sbjct: 21 DTSFLSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPAC 77
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCN 291 CP C V C H +CY CLRTR T +C +CN Sbjct: 991 CPSCKVKRK-DAVLSKCFHVFCYDCLRTR-YETRQRKCPKCN 1030
>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)| Length = 710 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRT------RSAATSSYRCA 300 +E CP+C S P + LPC H C C R S + S+R A Sbjct: 6 EELKCPVCGSFYREPII-LPCSHNLCQACARNILVQTPESESPQSHRAA 53
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 41 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIIT-ALRSGNKECPTCRKKLVS 96
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 41 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIIT-ALRSGNKECPTCRKKLVS 96
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 41 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIIT-ALRSGNKECPTCRKKLVS 96
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 41 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIIT-ALRSGNKECPTCRKKLVS 96
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 38 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVT-ALRSGNKECPTCRKKLVS 93
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVA 276 S S E CPIC+ C HR+C C+ T + + + C C + +V+ Sbjct: 41 SPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIIT-ALRSGNKECPTCRKKLVS 96
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSA-ATSSYRCARCNEVV 282 D CPIC+ P + L C H YC CL + S + RC C + V Sbjct: 12 DWLQCPICLEVFKEPLM-LQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 60
>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9| Length = 817 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLR 336 +E CP+C S P + LPC H C C R Sbjct: 6 EELKCPVCGSFYREPII-LPCSHNLCQACAR 35
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 455 KDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 K K SSG + C IC+ S ++P V C H +C C+ Sbjct: 744 KMKLILSSGSDEECAICLDSLTVP-VITHCAHVFCKPCI 781
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCN 291 CP C + P + L C H +C C++T T +C +CN Sbjct: 776 CPSCKTRPK-DCIMLKCYHLFCETCIKT-MYDTRQRKCPKCN 815
>RAD5_NEUCR (Q7S1P9) DNA repair protein rad-5 (EC 3.6.1.-)| Length = 1222 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = -3 Query: 428 DEA--NCPICVSSPSIPFVALPCQHRYCYYCL----RTRSAATSSYRCARCNE 288 DEA CPIC P I C H C CL + ++ RC +C E Sbjct: 955 DEAVNECPICAEEPMIDQAVTGCWHSACKKCLLDYIKHQTDRNEVPRCFQCRE 1007
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRC 303 D+ CPIC+ P + L C H YC CL S S C Sbjct: 12 DQLQCPICLEVFKEPLM-LQCGHSYCKDCLDNLSQHLDSELC 52
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 31.6 bits (70), Expect = 1.6 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 22/114 (19%) Frame = -3 Query: 464 PFSKDKSASSSGDEAN--------CPICVSSPSIPFVALPCQHRYCYYCLR--------- 336 P S+D +A S+ + CP+C+ P V +PC H +C CL+ Sbjct: 6 PESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKP-VQVPCGHVFCSACLQECLKPKKPV 64 Query: 335 ---TRSAATSSYRCARCNEVVVAIQR--HGSS*FYLDSRILAQTRTLCCKLERF 189 RSA R + +I+ HG ++ S+I A T C K + + Sbjct: 65 CGVCRSALAPGVRAVELERQIESIETSCHGCRKNFILSKIRAHV-TSCSKYQNY 117
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCN 291 CP C + P + L C H +C C++T T +C +CN Sbjct: 785 CPSCKTRPK-DCIMLKCYHLFCETCIKT-MYDTRQRKCPKCN 824
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 455 KDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 K K SSG + C IC+ S ++P V C H +C C+ Sbjct: 747 KMKLILSSGSDEECAICLDSLTVP-VITHCAHVFCKPCI 784
>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING| finger protein) Length = 710 Score = 31.6 bits (70), Expect = 1.6 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLR 336 +E CP+C S P + LPC H C C R Sbjct: 6 EELKCPVCGSFYREPII-LPCSHNLCQACAR 35
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLR 336 D+ C IC+ P + + PC H +CY CLR Sbjct: 46 DDLVCHICLQ-PLLQPLDTPCGHTFCYKCLR 75
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 31.2 bits (69), Expect = 2.1 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 22/114 (19%) Frame = -3 Query: 464 PFSKDKSASSSGDEAN--------CPICVSSPSIPFVALPCQHRYCYYCLR--------- 336 P S+D +A S+ + CP+C+ P V +PC H +C CL+ Sbjct: 6 PESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKP-VQVPCGHVFCSACLQECLKPKKPV 64 Query: 335 ---TRSAATSSYRCARCNEVVVAIQR--HGSS*FYLDSRILAQTRTLCCKLERF 189 RSA R A + +I+ HG ++ S+I A + C K + + Sbjct: 65 CGVCRSALAPGVRAAELERQIESIETSCHGCRKDFVLSKIRAHVAS-CSKYQSY 117
>RNF39_PANTR (Q7YR31) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 422 ANCPICVSSPSIPFVALPCQHRYCYYCLRTR 330 A CP+C S P V L C+H +C CL R Sbjct: 86 ATCPLCGGSFEDP-VLLACEHSFCRACLARR 115
>RNF39_MACMU (Q5TM52) RING finger protein 39| Length = 420 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 422 ANCPICVSSPSIPFVALPCQHRYCYYCLRTR 330 A CP+C S P V L C+H +C CL R Sbjct: 86 ATCPLCGGSFEDP-VLLACEHSFCRACLARR 115
>RNF39_HUMAN (Q9H2S5) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 422 ANCPICVSSPSIPFVALPCQHRYCYYCLRTR 330 A CP+C S P V L C+H +C CL R Sbjct: 86 ATCPLCGGSFEDP-VLLACEHSFCRACLARR 115
>TRAF2_MOUSE (P39429) TNF receptor-associated factor 2| Length = 501 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 294 C C + PF A C HRYC +CL T ++ CA C Sbjct: 34 CSACKNILRRPFQA-QCGHRYCSFCL-TSILSSGPQNCAAC 72
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -3 Query: 482 VKKFLLPFSKDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 ++K L+ K K SSG + C IC+ S + P V C H +C C+ Sbjct: 734 LRKMLI--EKMKIILSSGSDEECAICLDSLTFP-VITHCAHVFCKPCI 778
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL-RTRSAATSSYRCARC 294 +E CPIC+ P V++ C H +C CL R + + C C Sbjct: 8 EELTCPICLDYFQDP-VSIECGHNFCRGCLHRNWAPGGGPFPCPEC 52
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 30.4 bits (67), Expect = 3.6 Identities = 25/98 (25%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Frame = -3 Query: 557 MNRQLVWNEFSEMXXXXXXXLNSSSVKKFLLPFSKDKSASSSGDEANCPICVSSPSIPFV 378 M+ Q + + FS KF + SSG+ CPIC P I Sbjct: 897 MDLQELIDRFSASMENADTAEAQDPSAKFTTHALRQIQTESSGE---CPICSEEPMIDPA 953 Query: 377 ALPCQHRYCYYCL----RTRSAATSSYRCARCNEVVVA 276 C H C CL R ++ RC C V + Sbjct: 954 VTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPVTS 991
>DMA1_SCHPO (Q10322) Protein dma1| Length = 267 Score = 30.4 bits (67), Expect = 3.6 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -3 Query: 440 SSSGDEANCPICVSSPSIPFVAL---PCQHRYCYYCLR-TRSAATSSYRCARCNE 288 SS C IC+ P +P AL PC H Y Y C+R T + + + C C + Sbjct: 184 SSESGPPECCICLM-PVLPCQALFVAPCSHSYHYKCIRPTLNESHPYFSCFICRK 237
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 30.4 bits (67), Expect = 3.6 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL 339 DE CPIC+ + P +++ C H +C C+ Sbjct: 11 DEVTCPICLELLTEP-LSIDCGHSFCQVCI 39
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 446 SASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCL 339 S +S D C IC ++ I V +PC H CY C+ Sbjct: 153 STTSDCDVLTCKICFTN-KITKVLIPCGHSSCYECV 187
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Frame = -3 Query: 452 DKSASSSGDEANCPICVS--SPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNE--- 288 ++ A + G C +C +P + + PC H +C C++T ++ C CN Sbjct: 114 EEEAEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLRNT--CPLCNTPVA 171 Query: 287 -VVVAIQRHGS 258 ++V + GS Sbjct: 172 YLIVGVTASGS 182
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 30.0 bits (66), Expect = 4.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCL 339 +E CPIC+ + P ++L C H +C CL Sbjct: 11 EEVTCPICLELLTQP-LSLDCGHSFCQACL 39
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYC-LRTRSAATSSYRCARCNEVVVAIQRHGSS*F 249 CPIC+ P V+ C H +C +C L+ + +C C + GS+ F Sbjct: 24 CPICLELIKEP-VSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGSARF 79
>RNF19_HUMAN (Q9NV58) RING finger protein 19 (Dorfin) (Double ring-finger| protein) (p38 protein) Length = 838 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 8/56 (14%) Frame = -3 Query: 431 GDEANCPICV---SSPSIPFVALPCQHRYCYYCLRTR-----SAATSSYRCARCNE 288 GD CP+C+ S P + + C HR C CLR S + + C C E Sbjct: 127 GDFIECPLCLLRHSKDRFPDI-MTCHHRSCVDCLRQYLRIEISESRVNISCPECTE 181
>TRIM3_HUMAN (O75382) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) (RING finger protein 97) Length = 744 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATS-SYRCARCNEVVV 279 C IC+ P V LPC H +C CL+ A S + C C + + Sbjct: 22 CSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSI 67
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 30.0 bits (66), Expect = 4.7 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAAT-SSYRCARCNEVV 282 C IC+ SP PC H +C +C+ + T ++ +C C V Sbjct: 206 CVICLDSPE-NLSCTPCGHIFCNFCILSALGTTAATQKCPVCRRKV 250
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRS-AATSSYRCARCNEVV 282 D CPIC+ + L C H YC CL + S + RC C +VV Sbjct: 12 DRLQCPICLEVFKESLM-LQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
>FCERB_RAT (P13386) High affinity immunoglobulin epsilon receptor beta-subunit| (FcERI) (IgE Fc receptor, beta-subunit) (Fc epsilon receptor I beta-chain) Length = 243 Score = 30.0 bits (66), Expect = 4.7 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +2 Query: 50 PSHRLLYSFYKQNMTFY--TTNIHTPICLCFGSIICRLELQKSDGSGRRSVLVYNRGCGF 223 P + SF K+ + F T + ICLCFG+++C LQ SD +L+Y G F Sbjct: 45 PPQQTWQSFLKKELEFLGVTQVLVGLICLCFGTVVCS-TLQTSDFDD-EVLLLYRAGYPF 102
>RAD5_DEBHA (Q6BIP2) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1153 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -3 Query: 494 NSSSVKKFLLPFSKDKSASSSGDEANCPICVSSPSIPFVAL---PCQHRYCYYCL 339 N++ V+ + P + E+ C IC SP IP + PC H YC C+ Sbjct: 894 NNTEVRSVMFPLYEKIDLK----ESECSICTQSP-IPLGEMALTPCGHAYCLNCV 943
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYC-LRTRSAATSSYRCARCNEVVVAIQRHGSS*F 249 CPIC+ P V+ C H +C +C L+ + +C C + GS+ F Sbjct: 24 CPICLELIKEP-VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRSLQGSTRF 79
>RNF19_MOUSE (P50636) RING finger protein 19 (XY body protein) (XYbp)| (Gametogenesis expressed protein GEG-154) (UBCM4-interacting protein 117) (UIP117) Length = 840 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 8/56 (14%) Frame = -3 Query: 431 GDEANCPICV---SSPSIPFVALPCQHRYCYYCLRTR-----SAATSSYRCARCNE 288 GD CP+C+ S P + + C HR C CLR S + + C C E Sbjct: 127 GDFIECPLCLLRHSKDRFPDI-MTCHHRSCVDCLRQYLRIEISESRVNISCPECTE 181
>ARI1_MOUSE (Q9Z1K5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein 77) Length = 555 Score = 30.0 bits (66), Expect = 4.7 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 458 SKDKSASSSGDEANCPIC-VSSPSIPFVALPCQHRYCYYC 342 ++ + SS + C IC ++ P+ F L C H++C C Sbjct: 170 TRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQC 209
>ARI1_HUMAN (Q9Y4X5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein) (HHARI) (H7-AP2) (MOP-6) Length = 557 Score = 30.0 bits (66), Expect = 4.7 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 458 SKDKSASSSGDEANCPIC-VSSPSIPFVALPCQHRYCYYC 342 ++ + SS + C IC ++ P+ F L C H++C C Sbjct: 172 TRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQC 211
>FLIQ_AQUAE (O67774) Flagellar biosynthetic protein fliQ| Length = 89 Score = 30.0 bits (66), Expect = 4.7 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = -1 Query: 451 INQQVLLVMKQTVLYVSLVLAFPL*LSHANTGIVIIAYERGLQLQVLT 308 + Q +++ + Q L ++L+LA P+ LS G+V+ ++ Q+Q +T Sbjct: 1 MEQDLIVSLGQRALEMTLLLALPVLLSTFVVGLVVSIFQAATQIQEMT 48
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 29.6 bits (65), Expect = 6.1 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Frame = -3 Query: 467 LPFSKDKSASSSG-----DEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRC 303 + +D+ S+G E +C C P L C H +C +CL A++ C Sbjct: 12 MDLERDEPLKSTGPQISVSEFSCHCCYDILVNP-TTLNCGHSFCRHCLALWWASSKKTEC 70 Query: 302 ARCNE 288 C E Sbjct: 71 PECRE 75
>TRI36_MOUSE (Q80WG7) Tripartite motif protein 36 (Haprin) (Acrosome RBCC| protein) Length = 729 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCLR 336 E CP C + P + LPCQH C+ C++ Sbjct: 30 ELICPACKELFTHPLI-LPCQHSVCHKCVK 58
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 29.6 bits (65), Expect = 6.1 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Frame = -3 Query: 455 KDKSASS--SGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCN 291 KD S S D+ C C P V L C H YC C+ + + +C CN Sbjct: 177 KDNKVSKQISKDDLLCSACKELLVRP-VVLNCGHVYCEGCVVDMAEESEKIKCQECN 232
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C + V C H +C+ C++TR T +C +CN A H Sbjct: 931 CPCC-NMRKKDAVLTKCFHVFCFECVKTR-YDTRQRKCPKCNAAFGANDFH 979
>TRI36_HUMAN (Q9NQ86) Tripartite motif protein 36 (Zinc-binding protein Rbcc728)| (RING finger protein 98) Length = 728 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCLR 336 E CP C + P + LPCQH C+ C++ Sbjct: 30 ELICPACKELFTHPLI-LPCQHSICHKCVK 58
>YKZ7_YEAST (P36113) RING finger protein YKR017C| Length = 551 Score = 29.6 bits (65), Expect = 6.1 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 9/75 (12%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYC----LRTRSAATSSYRCARC-----NEVVVA 276 ++ C IC AL C H YC C ++ + + C C NE + Sbjct: 175 NDFTCIICCDKKDTETFALECGHEYCINCYRHYIKDKLHEGNIITCMDCSLALKNEDIDK 234 Query: 275 IQRHGSS*FYLDSRI 231 + H SS +DS I Sbjct: 235 VMGHPSSSKLMDSSI 249
>YQDA_CAEEL (Q09268) Hypothetical RING finger protein C32D5.10 in chromosome II| Length = 610 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/56 (28%), Positives = 21/56 (37%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRHGS 258 E C +C + C H +CY C+ S C C V IQR G+ Sbjct: 38 EEECSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCPMCKTPVSFIQRKGT 93
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C + V C H +C+ C++TR T +C +CN A H Sbjct: 922 CPCC-NMRKKDAVLTKCFHVFCFECVKTR-YDTRQRKCPKCNAAFGANDFH 970
>POL1_BAYMJ (Q01206) Genome polyprotein 1 [Contains: Protein P3; 6 kDa protein 1| (6K1); Cytoplasmic inclusion protein (CI); 6 kDa protein 2 (6K2); Viral genome-linked protein (VPg); Nuclear inclusion protein A (EC 3.4.22.44) (NI-a) (NIa) (NIa-pro); Nuclea Length = 2410 Score = 29.6 bits (65), Expect = 6.1 Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 8/98 (8%) Frame = -1 Query: 307 DVHAVMRLSLRFSDMDQVSFTWTQEFLHKPAPSVVN*NASSPTTIRFLKL--------QS 152 DVH MR + +FTW ++F+++ APSV++ +A ++ + + Sbjct: 1652 DVHDFMR--------EHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHVLTYNPEE 1703 Query: 151 TYYRPEAKTNWCMDIGGVKRHVLFVEAIEKSVRWNSGS 38 +Y + D G + V + + ++WN+ + Sbjct: 1704 LHYATKGLIKMLEDAGLTQGSVRTPQQVISDIQWNTSA 1741
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C + V C H +C+ C++TR T +C +CN A H Sbjct: 920 CPCC-NMRKKDAVLTKCFHVFCFECVKTR-YDTRQRKCPKCNAAFGANDFH 968
>YHB0_YEAST (P38748) Hypothetical 67.5 kDa protein in PRPS4-STE20 intergenic| region Length = 585 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -3 Query: 464 PFS-KDKSASSSGDEANCPICVS---SPSIPFVALPCQHRYCYYCLRTRSAATSSYRCAR 297 PF+ K K + CP+C+ S + V +PCQH + CL + RC Sbjct: 223 PFTVKKKKELVKVELPTCPVCLERMDSETTGLVTIPCQHTFHCQCLN----KWKNSRCPV 278 Query: 296 CNEVVVAIQR 267 C + + R Sbjct: 279 CRHSSLRLSR 288
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = -3 Query: 455 KDKSASSSGDEANCPIC---VSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEV 285 K+K + D+ C C + SP C HR+C C+ ++SS +C C E Sbjct: 40 KEKFVKTVEDKYKCEKCHLVLCSPK----QTECGHRFCESCM-AALLSSSSPKCTACQES 94 Query: 284 VV 279 +V Sbjct: 95 IV 96
>POLN_ONNVG (P13886) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2514 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +2 Query: 17 RTYFCLHRPRIPSHRLLY--SFYKQNMTFYTTNIHTPICLC 133 R Y PR+PS+R+ Y Y ++ TN T + +C Sbjct: 1988 RLYLASETPRVPSYRVTYPAPIYSPSINIKLTNPETAVAVC 2028
>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCLR 336 E CP+C P V LPC H C C R Sbjct: 30 ELLCPVCQEMYKQPLV-LPCTHNVCQACAR 58
>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = -3 Query: 425 EANCPICVSSPSIPFVALPCQHRYCYYCLR 336 E CP+C P V LPC H C C R Sbjct: 30 ELLCPVCQEMYKQPLV-LPCTHNVCQACAR 58
>TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor necrosis factor| type 2 receptor-associated protein 3) Length = 501 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -3 Query: 461 FSKDKSASSSGDEANCPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARC 294 FSK + + C C + PF A C HRYC +CL + ++ CA C Sbjct: 19 FSKTLLGTKLEAKYLCSACRNVLRRPFQA-QCGHRYCSFCLAS-ILSSGPQNCAAC 72
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.3 bits (64), Expect = 8.0 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCLR 336 +C IC+ + + ALPC H +C C+R Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIR 39
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.3 bits (64), Expect = 8.0 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCLR 336 +C IC+ + + ALPC H +C C+R Sbjct: 12 SCCICLDAITGAARALPCLHAFCLACIR 39
>TRI45_HUMAN (Q9H8W5) Tripartite motif protein 45 (RING finger protein 99)| Length = 580 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Frame = -3 Query: 488 SSVKKFLLPF-SKDKSASSSGD--EANCPICVSSPSIPFVALPCQHRYCYYCL 339 S +K LL F SK S ++ G+ + +CP+C+ P + LPC H C CL Sbjct: 2 SENRKPLLGFVSKLTSGTALGNSGKTHCPLCLGLFKAPRL-LPCLHTVCTTCL 53
>TRI15_MACMU (Q5TM55) Tripartite motif protein 15| Length = 465 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRS--AATSSYR---CARCNE 288 C +CV P V PC H +C CL T S A SS + C C E Sbjct: 16 CTLCVG-PLEDAVTAPCGHTFCRLCLPTLSQMGAQSSGKILLCPLCQE 62
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 428 DEANCPICVSSPSIPFVALPCQHRYCYYCLR 336 D+ C IC+ P + + PC H +C+ CLR Sbjct: 47 DDLVCHICLQ-PLLQPLDTPCGHTFCHKCLR 76
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C ++ V C H +C+ C+R R A +C +CN A H Sbjct: 949 CPCC-NTRKKDAVLTKCFHVFCFECVRGRYEARQR-KCPKCNAAFGAHDFH 997
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 29.3 bits (64), Expect = 8.0 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -3 Query: 419 NCPICVSSPSIPFVALPCQHRYCYYCLR 336 NCP+C S + LPC H C CLR Sbjct: 145 NCPMC-SRLRLHSFMLPCNHSLCEKCLR 171
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C ++ V C H +C+ C+R R A +C +CN A H Sbjct: 948 CPCC-NTRKKDAVLTKCFHVFCFECVRGRYEARQR-KCPKCNAAFGAHDFH 996
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C ++ V C H +C+ C+R R A +C +CN A H Sbjct: 948 CPCC-NTRKKDAVLTKCFHVFCFECVRGRYEARQR-KCPKCNAAFGAHDFH 996
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C ++ V C H +C+ C+R R A +C +CN A H Sbjct: 948 CPCC-NTRKKDAVLTKCFHVFCFECVRGRYEARQR-KCPKCNAAFGAHDFH 996
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRTRSAATSSYRCARCNEVVVAIQRH 264 CP C ++ V C H +C+ C+R R A +C +CN A H Sbjct: 948 CPCC-NTRKKDAVLTKCFHVFCFECVRGRYEARQR-KCPKCNAAFGAHDFH 996
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 416 CPICVSSPSIPFVALPCQHRYCYYCLRT 333 C IC +P V PC H +C C+RT Sbjct: 28 CHICKDFLKVP-VLTPCGHTFCSLCIRT 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,153,405 Number of Sequences: 219361 Number of extensions: 1595869 Number of successful extensions: 4158 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 4011 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4146 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
