ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11k16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 375 e-100
2dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic D... 375 e-100
3gb|AY109890.1| Zea mays CL59593_1 mRNA sequence 190 4e-45
4dbj|AK058667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
5gb|AY107134.1| Zea mays PCO091958 mRNA sequence 72 3e-09
6ref|NM_102585.2| Arabidopsis thaliana FIP1 (FH INTERACTING PROTE... 50 0.010
7gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomi... 50 0.010
8gb|AY059137.1| Arabidopsis thaliana putative FH protein interact... 50 0.010
9gb|AF370177.1| Arabidopsis thaliana putative FH protein interact... 50 0.010
10gb|AY056389.1| Arabidopsis thaliana At1g28200/F3H9_12 mRNA, comp... 50 0.010
11emb|BX816983.1|CNS0AEHK Arabidopsis thaliana Full-length cDNA Co... 50 0.010
12emb|BX813660.1|CNS0ADPP Arabidopsis thaliana Full-length cDNA Co... 50 0.010
13emb|BX818639.1|CNS0AAQ2 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
14emb|BX841957.1|CNS09Y2E Arabidopsis thaliana Full-length cDNA Co... 50 0.010
15gb|AY086994.1| Arabidopsis thaliana clone 30245 mRNA, complete s... 50 0.010
16gb|AF174428.1|AF174428 Arabidopsis thaliana FH protein interacti... 50 0.010
17ref|NM_120176.1| Arabidopsis thaliana unknown protein AT4G40100 ... 48 0.038
18emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, ... 48 0.038
19gb|AC074299.1|AC074299 Telomere associated sequence for Arabidop... 48 0.038
20gb|AY108960.1| Zea mays PCO105999 mRNA sequence 48 0.038
21gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10,... 48 0.038
22emb|AL022722.1|HS354N19 Human DNA sequence from clone RP3-354N19... 46 0.15
23dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 46 0.15
24ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predic... 44 0.59
25gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence 44 0.59
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.59
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
28dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.59
29gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.59
30gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's ... 42 2.3
31emb|CR361555.8| Zebrafish DNA sequence from clone CH211-215D20 i... 42 2.3
32gb|AC107761.9| Mus musculus chromosome 7, clone RP23-184M3, comp... 42 2.3
33emb|AL157705.18| Human DNA sequence from clone RP11-148C9 on chr... 42 2.3
34gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
35gb|AC158124.6| Mus musculus chromosome 7, clone RP24-71O4, compl... 42 2.3
36gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394... 42 2.3
37gb|AY109749.1| Zea mays CL65073_1 mRNA sequence 42 2.3
38emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-9... 42 2.3
39emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-3... 42 2.3
40emb|AL132708.3|CNS01DTA Human chromosome 14 DNA sequence BAC R-3... 42 2.3
41gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 2.3
42emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in ... 42 2.3
43gb|K02212.1|HUMA1ATP Human alpha-1-antitrypsin gene (S variant),... 42 2.3
44emb|AL163011.3|CNS01RI8 Human chromosome 14 DNA sequence BAC C-2... 42 2.3
45gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 9.2
46gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 9.2
47gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 9.2
48gb|AY491941.1| Trichinella spiralis newborn larvae-specific seri... 40 9.2
49emb|Z12169.1|ATYPATT1 A.thaliana telomere associated sequence DNA 40 9.2
50gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosom... 40 9.2
51emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in ... 40 9.2
52gb|AC006458.2| Homo sapiens BAC clone GS1-228E12 from 7, complet... 40 9.2
53gb|CP000001.1| Bacillus cereus E33L, complete genome 40 9.2
54emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on ch... 40 9.2
55emb|AL133459.9| Human DNA sequence from clone RP3-522D12 on chro... 40 9.2
56ref|XM_780091.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.2
57gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosom... 40 9.2
58gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosom... 40 9.2
59emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in ... 40 9.2
60gb|AC159546.4| Mus musculus 6 BAC RP23-450B23 (Roswell Park Canc... 40 9.2
61gb|AC079174.20| Homo sapiens 12 BAC RP11-651L5 (Roswell Park Can... 40 9.2
62gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, compl... 40 9.2
63emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, co... 40 9.2
64emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 ... 40 9.2
65gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.2
66gb|AC009558.14|AC009558 Homo sapiens chromosome 15, clone RP11-1... 40 9.2
67gb|AF331160.1|AF331160 Trichinella spiralis newborn larvae-speci... 40 9.2
68gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complet... 40 9.2
69gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, comple... 40 9.2
70gb|AC012050.7|AC012050 Homo sapiens chromosome 15 clone RP11-552... 40 9.2
71ref|NM_145722.1| Rattus norvegicus Bartomin (LOC252831), mRNA 40 9.2
72gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 9.2
73gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, compl... 40 9.2
74emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 i... 40 9.2
75emb|AL049838.3|CNS0000C Human chromosome 14 DNA sequence BAC R-9... 40 9.2
76gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 9.2
77gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 9.2
78gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, comple... 40 9.2
79gb|AC149586.6| Mus musculus BAC clone RP24-510C9 from 12, comple... 40 9.2
80emb|AL663113.7| Mouse DNA sequence from clone RP23-207B22 on chr... 40 9.2
81emb|AL355792.8| Human DNA sequence from clone RP5-1123F10 on chr... 40 9.2
82dbj|AB077475.1| Rattus norvegicus mRNA for barmotin, complete cds 40 9.2 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  375 bits (189), Expect = e-100
 Identities = 252/273 (92%)
 Strand = Plus / Minus

                                                                           
Query: 394     ccttgtagtaactccattctgttttatttcctgctttgtaagaaagaggattgtcactgc 453
               ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 6045130 ccttgtagtaactccattcagttttatttccagctttgtaagagagaggattgtcgctgc 6045071

                                                                           
Query: 454     agaatgcaattttagctgtagaaatgtacataactcccatgacaggaccagcggatgttg 513
               ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 6045070 agaatgcaattttagctgtagaaatgtacatgactcccatgacaggaccagcagatgttg 6045011

                                                                           
Query: 514     atagatagcatgcgtaagacattttcagctgctcatccggcagaatctcaaacgtctgtt 573
               ||||||||||||| ||||| |||||||||||||| || || |||| |||||| || ||  
Sbjct: 6045010 atagatagcatgcataagatattttcagctgctcctcaggaagaacctcaaaagtttgcc 6044951

                                                                           
Query: 574     taaatattttttcatagccaccttccgctaagacttttgttccttgagccagccgtccca 633
               | ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 6044950 tgaatattttttcatagccaccttctgctaagactttagttccttgagcaagccgtccca 6044891

                                                
Query: 634     tagcagcttcagtaaaactaggccctgtcttga 666
               |||||||||||||||||||||| ||||||||||
Sbjct: 6044890 tagcagcttcagtaaaactaggtcctgtcttga 6044858



 Score =  182 bits (92), Expect = 1e-42
 Identities = 143/160 (89%)
 Strand = Plus / Minus

                                                                           
Query: 237     gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 296
               |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 6045844 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 6045785

                                                                           
Query: 297     tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttgctcactgaa 356
               || |||||||| || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 6045784 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttgctcactgaa 6045725

                                                       
Query: 357     ggattggctgttcttagctgatgaagaggaatgaccacct 396
               ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 6045724 ggattagccgctcttagctggtgcagaggaatgaccacct 6045685
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>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644A02
          Length = 144954

 Score =  375 bits (189), Expect = e-100
 Identities = 252/273 (92%)
 Strand = Plus / Minus

                                                                         
Query: 394   ccttgtagtaactccattctgttttatttcctgctttgtaagaaagaggattgtcactgc 453
             ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 49629 ccttgtagtaactccattcagttttatttccagctttgtaagagagaggattgtcgctgc 49570

                                                                         
Query: 454   agaatgcaattttagctgtagaaatgtacataactcccatgacaggaccagcggatgttg 513
             ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 49569 agaatgcaattttagctgtagaaatgtacatgactcccatgacaggaccagcagatgttg 49510

                                                                         
Query: 514   atagatagcatgcgtaagacattttcagctgctcatccggcagaatctcaaacgtctgtt 573
             ||||||||||||| ||||| |||||||||||||| || || |||| |||||| || ||  
Sbjct: 49509 atagatagcatgcataagatattttcagctgctcctcaggaagaacctcaaaagtttgcc 49450

                                                                         
Query: 574   taaatattttttcatagccaccttccgctaagacttttgttccttgagccagccgtccca 633
             | ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 49449 tgaatattttttcatagccaccttctgctaagactttagttccttgagcaagccgtccca 49390

                                              
Query: 634   tagcagcttcagtaaaactaggccctgtcttga 666
             |||||||||||||||||||||| ||||||||||
Sbjct: 49389 tagcagcttcagtaaaactaggtcctgtcttga 49357



 Score =  182 bits (92), Expect = 1e-42
 Identities = 143/160 (89%)
 Strand = Plus / Minus

                                                                         
Query: 237   gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 296
             |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 50343 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 50284

                                                                         
Query: 297   tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttgctcactgaa 356
             || |||||||| || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 50283 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttgctcactgaa 50224

                                                     
Query: 357   ggattggctgttcttagctgatgaagaggaatgaccacct 396
             ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 50223 ggattagccgctcttagctggtgcagaggaatgaccacct 50184
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>gb|AY109890.1| Zea mays CL59593_1 mRNA sequence
          Length = 1044

 Score =  190 bits (96), Expect = 4e-45
 Identities = 167/188 (88%), Gaps = 2/188 (1%)
 Strand = Plus / Plus

                                                                       
Query: 210 ggttgcaactcacgagcacc-gtcaagtgcttcttgcaggctggacacggccttgtcgta 268
           |||||||||||||||||||  | |||| |||||||| || ||||   | |||||||||||
Sbjct: 223 ggttgcaactcacgagcactagccaag-gcttcttgaagactggctgcagccttgtcgta 281

                                                                       
Query: 269 catcaggaaacccatgaaccagaactcatgcccttcaacagagacaacctgaatatactt 328
           ||| || |||||||||||||||||||||||||||||||| || || |||||||| |||||
Sbjct: 282 cattagaaaacccatgaaccagaactcatgcccttcaacggaaacgacctgaatgtactt 341

                                                                       
Query: 329 ttcagcgggatttactttgctcactgaaggattggctgttcttagctgatgaagaggaat 388
            |||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||
Sbjct: 342 ctcagcgggatttactttgcttactgaaggattagctgctcttagctggtgaagaggaat 401

                   
Query: 389 gaccacct 396
           ||||||||
Sbjct: 402 gaccacct 409
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>dbj|AK058667.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G11, full
           insert sequence
          Length = 1114

 Score =  182 bits (92), Expect = 1e-42
 Identities = 143/160 (89%)
 Strand = Plus / Minus

                                                                       
Query: 237 gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 296
           |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 794 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 735

                                                                       
Query: 297 tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttgctcactgaa 356
           || |||||||| || ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 734 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttgctcactgaa 675

                                                   
Query: 357 ggattggctgttcttagctgatgaagaggaatgaccacct 396
           ||||| || | ||||||||| || ||||||||||||||||
Sbjct: 674 ggattagccgctcttagctggtgcagaggaatgaccacct 635



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                       
Query: 394 ccttgtagtaactccattctgttttatttcctgctttgtaagaaagaggattgtcactgc 453
           ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 81  ccttgtagtaactccattcagttttatttccagctttgtaagagagaggattgtcgctgc 22

                                
Query: 454 agaatgcaattttagctgtag 474
           |||||||||||||||||||||
Sbjct: 21  agaatgcaattttagctgtag 1
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>gb|AY107134.1| Zea mays PCO091958 mRNA sequence
          Length = 495

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 627 cgtcccatagcagcttcagtaaaactaggccctgtcttgaagtg 670
           ||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 475 cgtcccatagcagcttcagtaaaactaggtccagtcttgaagtg 432
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>ref|NM_102585.2| Arabidopsis thaliana FIP1 (FH INTERACTING PROTEIN 1) AT1G28200
           (FIP1) mRNA, complete cds
          Length = 1094

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 634 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 575

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 574 ctcccaggacaggaccagcagatgt 550
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>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete
             sequence
          Length = 121720

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 427   ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
             |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 93832 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 93773

                                      
Query: 487   ctcccatgacaggaccagcggatgt 511
             |||||| |||||||||||| |||||
Sbjct: 93772 ctcccaggacaggaccagcagatgt 93748
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>gb|AY059137.1| Arabidopsis thaliana putative FH protein interacting protein FIP1
           (At1g28200) mRNA, complete cds
          Length = 811

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 568 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 509

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 508 ctcccaggacaggaccagcagatgt 484
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>gb|AF370177.1| Arabidopsis thaliana putative FH protein interacting protein FIP1
           (At1g28200) mRNA, complete cds
          Length = 1034

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 634 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 575

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 574 ctcccaggacaggaccagcagatgt 550
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>gb|AY056389.1| Arabidopsis thaliana At1g28200/F3H9_12 mRNA, complete cds
          Length = 984

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 600 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 541

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 540 ctcccaggacaggaccagcagatgt 516
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>emb|BX816983.1|CNS0AEHK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZH04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 884

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 510 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 451

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 450 ctcccaggacaggaccagcagatgt 426
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>emb|BX813660.1|CNS0ADPP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB30ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1002

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 582 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 523

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 522 ctcccaggacaggaccagcagatgt 498
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>emb|BX818639.1|CNS0AAQ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL8ZB03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 968

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 616 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 557

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 556 ctcccaggacaggaccagcagatgt 532
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>emb|BX841957.1|CNS09Y2E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL5ZA11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 932

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 582 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 523

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 522 ctcccaggacaggaccagcagatgt 498
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>gb|AY086994.1| Arabidopsis thaliana clone 30245 mRNA, complete sequence
          Length = 978

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 600 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 541

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 540 ctcccaggacaggaccagcagatgt 516
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>gb|AF174428.1|AF174428 Arabidopsis thaliana FH protein interacting protein FIP1 (FIP1)
           mRNA, complete cds
          Length = 1008

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 427 ctttgtaagaaagaggattgtcactgcagaatgcaattttagctgtagaaatgtacataa 486
           |||||||||| ||||||||||||||  |||| ||||  ||    || ||||  |||||||
Sbjct: 600 ctttgtaagagagaggattgtcactagagaacgcaagcttgtgagtcgaaagatacataa 541

                                    
Query: 487 ctcccatgacaggaccagcggatgt 511
           |||||| |||||||||||| |||||
Sbjct: 540 ctcccaggacaggaccagcagatgt 516
to top
>ref|NM_120176.1| Arabidopsis thaliana unknown protein AT4G40100 mRNA, complete cds
          Length = 678

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 485 aactcccatgacaggaccagcggatgttgata 516
           |||||||||||| |||||||| ||||||||||
Sbjct: 480 aactcccatgactggaccagctgatgttgata 449



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 275 gaaacccatgaaccagaactcatg 298
           ||||||||||||||| ||||||||
Sbjct: 606 gaaacccatgaaccaaaactcatg 583
to top
>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92
          Length = 112067

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 485    aactcccatgacaggaccagcggatgttgata 516
              |||||||||||| |||||||| ||||||||||
Sbjct: 111084 aactcccatgactggaccagctgatgttgata 111053



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 275    gaaacccatgaaccagaactcatg 298
              ||||||||||||||| ||||||||
Sbjct: 111463 gaaacccatgaaccaaaactcatg 111440
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>gb|AC074299.1|AC074299 Telomere associated sequence for Arabidopsis thaliana TEL1S from
            chromosome I, complete sequence
          Length = 2505

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 485  aactcccatgacaggaccagcggatgttgata 516
            |||||||||||| |||||||| ||||||||||
Sbjct: 1973 aactcccatgactggaccagctgatgttgata 1942
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>gb|AY108960.1| Zea mays PCO105999 mRNA sequence
          Length = 1111

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 387 atgaccaccttgtagtaactccattctgtttt 418
           ||||||||||||||||||||||| || |||||
Sbjct: 702 atgaccaccttgtagtaactccactcagtttt 671
to top
>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence
          Length = 107205

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 275   gaaacccatgaaccagaactcatg 298
             ||||||||||||||||||||||||
Sbjct: 13594 gaaacccatgaaccagaactcatg 13571
to top
>emb|AL022722.1|HS354N19 Human DNA sequence from clone RP3-354N19 on chromosome 6q22 Contains
             the 3' end of the MAN1A1 gene for mannosidase alpha class
             1A member 1 (Man9-mannosidase) (MAN9 HUMM9), a Cytochrome
             C Oxidase Polypeptide I pseudogene and a pseudogene
             similar to 60S Ribosomal Protein L13A (RPL13), complete
             sequence
          Length = 139171

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 412   ctgttttatttcctgctttgtaa 434
             |||||||||||||||||||||||
Sbjct: 86117 ctgttttatttcctgctttgtaa 86095
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 18      aacgcaaagaacaagaacaaaca 40
               |||||||||||||||||||||||
Sbjct: 1010239 aacgcaaagaacaagaacaaaca 1010261
to top
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 489 cccatgacaggaccagcggatgttgatagatagcatgc 526
           ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 512 cccatgacaggaccagcagaggttgacagataacatgc 475



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 cccatgaaccagaactcatg 298
           ||||||||||||||||||||
Sbjct: 722 cccatgaaccagaactcatg 703
to top
>gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence
          Length = 968

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 257 ggccttgtcgtacatcaggaaacccatgaaccagaact 294
           ||||||||||||  ||| ||| ||||||||||||||||
Sbjct: 690 ggccttgtcgtagttcacgaaccccatgaaccagaact 653
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 489     cccatgacaggaccagcggatgttgatagatagcatgc 526
               ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 4575699 cccatgacaggaccagcagaggttgacagataacatgc 4575662



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     cccatgaaccagaactcatg 298
               ||||||||||||||||||||
Sbjct: 4576207 cccatgaaccagaactcatg 4576188
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 489     cccatgacaggaccagcggatgttgatagatagcatgc 526
               ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 4575814 cccatgacaggaccagcagaggttgacagataacatgc 4575777



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     cccatgaaccagaactcatg 298
               ||||||||||||||||||||
Sbjct: 4576322 cccatgaaccagaactcatg 4576303
to top
>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full
           insert sequence
          Length = 1136

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 489 cccatgacaggaccagcggatgttgatagatagcatgc 526
           ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 663 cccatgacaggaccagcagaggttgacagataacatgc 626



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 cccatgaaccagaactcatg 298
           ||||||||||||||||||||
Sbjct: 873 cccatgaaccagaactcatg 854
to top
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 489   cccatgacaggaccagcggatgttgatagatagcatgc 526
             ||||||||||||||||| || ||||| ||||| |||||
Sbjct: 16654 cccatgacaggaccagcagaggttgacagataacatgc 16617



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cccatgaaccagaactcatg 298
             ||||||||||||||||||||
Sbjct: 17162 cccatgaaccagaactcatg 17143
to top
>gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 189178

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   tcactgcagaatgcaatttta 467
             |||||||||||||||||||||
Sbjct: 56907 tcactgcagaatgcaatttta 56887
to top
>emb|CR361555.8| Zebrafish DNA sequence from clone CH211-215D20 in linkage group 11,
              complete sequence
          Length = 202951

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 568    tctgtttaaatattttttcat 588
              |||||||||||||||||||||
Sbjct: 119780 tctgtttaaatattttttcat 119800
to top
>gb|AC107761.9| Mus musculus chromosome 7, clone RP23-184M3, complete sequence
          Length = 216757

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    acaagaacaaacacgtataca 48
             |||||||||||||||||||||
Sbjct: 44293 acaagaacaaacacgtataca 44313
to top
>emb|AL157705.18| Human DNA sequence from clone RP11-148C9 on chromosome 10 Contains part
             of the gene for SEC15 (S. cerevisiae)-like (SEC15L) and
             one CpG island, complete sequence
          Length = 76763

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   cattctgttttatttcctgct 428
             |||||||||||||||||||||
Sbjct: 42856 cattctgttttatttcctgct 42876
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 553     gcagaatctcaaacgtctgtt 573
               |||||||||||||||||||||
Sbjct: 4194054 gcagaatctcaaacgtctgtt 4194034
to top
>gb|AC158124.6| Mus musculus chromosome 7, clone RP24-71O4, complete sequence
          Length = 156165

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    acaagaacaaacacgtataca 48
             |||||||||||||||||||||
Sbjct: 68781 acaagaacaaacacgtataca 68761
to top
>gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394B5 map 15q21.2, complete
             sequence
          Length = 189796

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    caaagaacaagaacaaacacg 42
             |||||||||||||||||||||
Sbjct: 85062 caaagaacaagaacaaacacg 85042
to top
>gb|AY109749.1| Zea mays CL65073_1 mRNA sequence
          Length = 828

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 gaaacccatgaaccagaactc 295
           |||||||||||||||||||||
Sbjct: 799 gaaacccatgaaccagaactc 779
to top
>emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-951P22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 228652

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 410   ttctgttttatttcctgctttgtaa 434
             |||||||||||||||| ||||||||
Sbjct: 18787 ttctgttttatttccttctttgtaa 18763
to top
>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193301

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   ccctggggatgttacaggctg 179
             |||||||||||||||||||||
Sbjct: 10633 ccctggggatgttacaggctg 10653
to top
>emb|AL132708.3|CNS01DTA Human chromosome 14 DNA sequence BAC R-349I1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 147505

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    ccctggggatgttacaggctg 179
              |||||||||||||||||||||
Sbjct: 136724 ccctggggatgttacaggctg 136744
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 572     tttaaatattttttcatagcc 592
               |||||||||||||||||||||
Sbjct: 4676939 tttaaatattttttcatagcc 4676959
to top
>emb|BX000993.6| Zebrafish DNA sequence from clone DKEY-88I22 in linkage group 1,
             complete sequence
          Length = 203257

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   tctgtttaaatattttttcat 588
             |||||||||||||||||||||
Sbjct: 58105 tctgtttaaatattttttcat 58125
to top
>gb|K02212.1|HUMA1ATP Human alpha-1-antitrypsin gene (S variant), complete cds
          Length = 12222

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   ccctggggatgttacaggctg 179
             |||||||||||||||||||||
Sbjct: 10621 ccctggggatgttacaggctg 10641
to top
>emb|AL163011.3|CNS01RI8 Human chromosome 14 DNA sequence BAC C-2324M15 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 100791

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 410  ttctgttttatttcctgctttgtaa 434
            |||||||||||||||| ||||||||
Sbjct: 2306 ttctgttttatttccttctttgtaa 2330
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 419629 tcaaacgtttgtttaaatattttt 419606
to top
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 395647 tcaaacgtttgtttaaatattttt 395624
to top
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 395660 tcaaacgtttgtttaaatattttt 395637
to top
>gb|AY491941.1| Trichinella spiralis newborn larvae-specific serine protease SS2-1
            mRNA, complete cds
          Length = 1600

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  ttgtagtaactccattctgt 415
            ||||||||||||||||||||
Sbjct: 1499 ttgtagtaactccattctgt 1480
to top
>emb|Z12169.1|ATYPATT1 A.thaliana telomere associated sequence DNA
          Length = 503

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 275 gaaacccatgaaccagaactcatg 298
           ||||||||||||||| ||||||||
Sbjct: 62  gaaacccatgaaccaaaactcatg 39
to top
>gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosome 12, complete sequence
          Length = 197665

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    actccattctgttttatttc 423
              ||||||||||||||||||||
Sbjct: 167230 actccattctgttttatttc 167249
to top
>emb|BX323028.6| Zebrafish DNA sequence from clone DKEY-211A8 in linkage group 23,
            complete sequence
          Length = 97428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 457  atgcaattttagctgtagaaatgt 480
            ||||||||| ||||||||||||||
Sbjct: 3601 atgcaatttaagctgtagaaatgt 3624
to top
>gb|AC006458.2| Homo sapiens BAC clone GS1-228E12 from 7, complete sequence
          Length = 121336

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 465  ttagctgtagaaatgtacataact 488
            |||||||||||||| |||||||||
Sbjct: 3429 ttagctgtagaaatttacataact 3406
to top
>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 413021 tcaaacgtttgtttaaatattttt 412998
to top
>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the
             5' end of a novel gene (KIAA1332), a ribosomal protein L22
             (RPL22) pseudogene, a putative MAPK activating protein
             (DKFZp566C0424), a novel gene (LOC374955) and two CpG
             islands, complete sequence
          Length = 124949

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   agaatgcaattttagctgta 473
             ||||||||||||||||||||
Sbjct: 61089 agaatgcaattttagctgta 61070
to top
>emb|AL133459.9| Human DNA sequence from clone RP3-522D12 on chromosome 6, complete
             sequence
          Length = 99666

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   taaatattttttcatagcca 593
             ||||||||||||||||||||
Sbjct: 19875 taaatattttttcatagcca 19894
to top
>ref|XM_780091.1| PREDICTED: Strongylocentrotus purpuratus similar to talin 1
           (LOC580010), mRNA
          Length = 7836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 ctgttcttagctgatgaaga 383
           ||||||||||||||||||||
Sbjct: 157 ctgttcttagctgatgaaga 176
to top
>gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosome 8, complete sequence
          Length = 220224

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    aattttagctgtagaaatgt 480
              ||||||||||||||||||||
Sbjct: 138585 aattttagctgtagaaatgt 138604
to top
>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence
          Length = 182428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   aattttagctgtagaaatgt 480
             ||||||||||||||||||||
Sbjct: 17552 aattttagctgtagaaatgt 17571
to top
>emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in linkage group 11, complete
              sequence
          Length = 223355

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    ctgtttaaatattttttcat 588
              ||||||||||||||||||||
Sbjct: 129327 ctgtttaaatattttttcat 129308
to top
>gb|AC159546.4| Mus musculus 6 BAC RP23-450B23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 192227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    actcccatgacaggaccagc 505
              ||||||||||||||||||||
Sbjct: 130341 actcccatgacaggaccagc 130360
to top
>gb|AC079174.20| Homo sapiens 12 BAC RP11-651L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87817

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   acaggctgaactgaaacttc 191
             ||||||||||||||||||||
Sbjct: 9999  acaggctgaactgaaacttc 10018
to top
>gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, complete sequence
          Length = 177782

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tccattctgttttatttcct 425
             ||||||||||||||||||||
Sbjct: 54629 tccattctgttttatttcct 54610
to top
>emb|BX470267.5| Zebrafish DNA sequence from clone DKEY-98H23, complete sequence
          Length = 182303

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 457   atgcaattttagctgtagaaatgt 480
             ||||||||| ||||||||||||||
Sbjct: 90190 atgcaatttaagctgtagaaatgt 90213
to top
>emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 in linkage group 24,
             complete sequence
          Length = 168886

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    caaagaacaagaacaaacac 41
             ||||||||||||||||||||
Sbjct: 49913 caaagaacaagaacaaacac 49894
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 599    cgctaagacttttgttcctt 618
              ||||||||||||||||||||
Sbjct: 594031 cgctaagacttttgttcctt 594012
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>gb|AC009558.14|AC009558 Homo sapiens chromosome 15, clone RP11-142J21, complete sequence
          Length = 184568

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    ctccattctgttttatttcc 424
              ||||||||||||||||||||
Sbjct: 145260 ctccattctgttttatttcc 145241
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>gb|AF331160.1|AF331160 Trichinella spiralis newborn larvae-specific serine protease SS2
            mRNA, complete cds
          Length = 1609

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  ttgtagtaactccattctgt 415
            ||||||||||||||||||||
Sbjct: 1461 ttgtagtaactccattctgt 1442
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>gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complete sequence
          Length = 165028

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 567    gtctgtttaaatattttttc 586
              ||||||||||||||||||||
Sbjct: 104323 gtctgtttaaatattttttc 104342
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>gb|AC106894.4| Homo sapiens BAC clone RP11-141E13 from 4, complete sequence
          Length = 183176

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   gtctgtttaaatattttttc 586
             ||||||||||||||||||||
Sbjct: 30783 gtctgtttaaatattttttc 30764
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>gb|AC012050.7|AC012050 Homo sapiens chromosome 15 clone RP11-552E10 map 15q21.1, complete
             sequence
          Length = 191286

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   ctccattctgttttatttcc 424
             ||||||||||||||||||||
Sbjct: 31793 ctccattctgttttatttcc 31774
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>ref|NM_145722.1| Rattus norvegicus Bartomin (LOC252831), mRNA
          Length = 5352

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 291 aactcatgcccttcaacagagaca 314
           ||||||||||| ||||||||||||
Sbjct: 584 aactcatgcccatcaacagagaca 561
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      aacgcaaagaacaagaacaa 37
               ||||||||||||||||||||
Sbjct: 3184543 aacgcaaagaacaagaacaa 3184524
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>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence
          Length = 175641

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 570    tgtttaaatattttttcata 589
              ||||||||||||||||||||
Sbjct: 119017 tgtttaaatattttttcata 119036
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>emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 in linkage group 2,
             complete sequence
          Length = 215263

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   agacgctcagagcagaagac 135
             ||||||||||||||||||||
Sbjct: 16029 agacgctcagagcagaagac 16048
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>emb|AL049838.3|CNS0000C Human chromosome 14 DNA sequence BAC R-999E24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 211723

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ggatttactttgctcactga 355
             ||||||||||||||||||||
Sbjct: 70157 ggatttactttgctcactga 70176
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 395647 tcaaacgtttgtttaaatattttt 395624
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 561    tcaaacgtctgtttaaatattttt 584
              |||||||| |||||||||||||||
Sbjct: 502640 tcaaacgtttgtttaaatattttt 502617
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>gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, complete sequence
          Length = 203368

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    acttttgttccttgagccag 625
              ||||||||||||||||||||
Sbjct: 158213 acttttgttccttgagccag 158232
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>gb|AC149586.6| Mus musculus BAC clone RP24-510C9 from 12, complete sequence
          Length = 198641

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   actccattctgttttatttc 423
             ||||||||||||||||||||
Sbjct: 66318 actccattctgttttatttc 66337
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>emb|AL663113.7| Mouse DNA sequence from clone RP23-207B22 on chromosome X, complete
             sequence
          Length = 180424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 623   cagccgtcccatagcagcttcagt 646
             |||||| |||||||||||||||||
Sbjct: 98116 cagccggcccatagcagcttcagt 98139
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>emb|AL355792.8| Human DNA sequence from clone RP5-1123F10 on chromosome 11 Contains
             STSs and GSSs, complete sequence
          Length = 130116

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   ggatttactttgctcactga 355
             ||||||||||||||||||||
Sbjct: 82670 ggatttactttgctcactga 82651
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>dbj|AB077475.1| Rattus norvegicus mRNA for barmotin, complete cds
          Length = 5352

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 291 aactcatgcccttcaacagagaca 314
           ||||||||||| ||||||||||||
Sbjct: 584 aactcatgcccatcaacagagaca 561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,644,994
Number of Sequences: 3902068
Number of extensions: 6644994
Number of successful extensions: 144864
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144182
Number of HSP's gapped (non-prelim): 682
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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