>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor|
          Length = 250

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -1

Query: 566 DEG-GEDSSLAMKVIVSKGSGPNLEFTCTAFREEITIDDMMIAEKTEPDAEKFPFEGPEF 390
           DEG   +SS+ + V V+K SG  LEF+C AF +EI ID + +    +   ++   EGP+F
Sbjct: 138 DEGPSNESSIPLVVTVTKKSGLTLEFSCMAFPDEIAIDALSVKHPGDSLEDQLANEGPDF 197

Query: 389 TELPPNVQKGLFKFLEVRGVTLTTTNFMHDYMITKQTKEYVRWMTKLKGLVQ 234
            +L  N++K  +KFLE+RGV  +TTNF+H+YM  K  +EY  W+  +K  ++
Sbjct: 198 EDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKEFME 249

>Y2979_ARATH (O22288) Hypothetical protein At2g39790, mitochondrial precursor|
          Length = 240

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 29/106 (27%), Positives = 54/106 (50%)
 Frame = -1

Query: 554 EDSSLAMKVIVSKGSGPNLEFTCTAFREEITIDDMMIAEKTEPDAEKFPFEGPEFTELPP 375
           ++ S  + V V K +G ++EFTC A+ + I + D+ + +      E    + P F  L  
Sbjct: 137 DELSFPLVVTVIKKNGVSIEFTCQAYADYIDLTDLTVHDYQYQMGET---DWPRFKNLDD 193

Query: 374 NVQKGLFKFLEVRGVTLTTTNFMHDYMITKQTKEYVRWMTKLKGLV 237
           N++K   ++L  R +    T  +H YM++K  +EY+ W+  +   V
Sbjct: 194 NLKKAFHRYLATR-LDANITKLLHKYMVSKIKREYLLWLKNVNKFV 238

>MAM33_YEAST (P40513) Mitochondrial acidic protein MAM33, mitochondrial|
           precursor
          Length = 266

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = -1

Query: 407 FEGPEFTELPPNVQKGLFKFLEVRGVTLTTTNFMHDYMITKQTKEYVRWMTKLK 246
           + GP F+ L   +Q+ L  +LE RGV     +F+  Y   K+  EY+ W+ K+K
Sbjct: 209 YHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMK 262

>PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 811

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 387 RASSQRAEGPVQVPGGTRCDADNHQLHARLHDH 289
           RA+ QRAEG   +PGG R      ++ A L DH
Sbjct: 142 RAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDH 174

>ZW10_RAT (Q4V8C2) Centromere/kinetochore protein zw10 homolog|
          Length = 776

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 13/119 (10%)
 Frame = +3

Query: 234 LDQTLELGHPPDVLLGLLGDHVIVHEVGGC----------QRHTSYLQELE---QALLHV 374
           LD  LE+G  P+++L  +   VI  ++  C            ++S LQ+ E   Q+    
Sbjct: 310 LDADLEIGKVPEIVLAEMLGEVIWEDLSDCLIRNCLVYSIPTNSSKLQQYEEIIQSTEEF 369

Query: 375 GRKLGEFRALKGEFLCIRFCFLCYHHVVNGDLLTKGCAGELKVWARSLGDYHLHSKATV 551
            + L E R LKG+   +    L Y   +N     K C  ++ V AR L    +H+   +
Sbjct: 370 EKSLKEMRFLKGDTTDL----LKYARNINSHFANKKCQ-DVIVAARHLMTSEIHNTVKI 423

>PRTP_EBV (P25939) Probable processing and transport protein|
          Length = 789

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +3

Query: 255 GHPPDVLLGLLGDHVI----VHEVGGCQRHTSYLQELEQALLHVGRKLG 389
           GH  DV L L+ D  I    ++ V  C  HT  L+ LE+AL  +GR  G
Sbjct: 213 GHKVDVSLCLINDIEILMKRINSVFYCMSHTMGLESLERALDLLGRFRG 261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,236,019
Number of Sequences: 219361
Number of extensions: 1600847
Number of successful extensions: 4176
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4175
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)