ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me... 31 3.5
2KNG1_HUMAN (P01042) Kininogen-1 precursor (Alpha-2-thiol protein... 30 4.5
3PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B me... 30 5.9
4PHLB1_RAT (Q63312) Pleckstrin homology-like domain family B memb... 30 5.9

>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein|
            LL5-alpha)
          Length = 1377

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 498  EKAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQ 611
            EK ++  HA+ ++ +  R R  EL     E ERRR++Q
Sbjct: 1152 EKMLKEAHAEKNRLMESREREMELRRQALEEERRRREQ 1189



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>KNG1_HUMAN (P01042) Kininogen-1 precursor (Alpha-2-thiol proteinase inhibitor)|
           [Contains: Kininogen-1 heavy chain; Bradykinin (Kallidin
           I); Lysyl-bradykinin (Kallidin II); Kininogen-1 light
           chain; Low molecular weight growth-promoting factor]
          Length = 644

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = +3

Query: 363 PGHGPRRAGCRRHDTRVNDIKKNEDEEPLGTGCRA*HGLDRAGGREKAIQARHAQSHKKI 542
           PG  P R+      +R+ +IK+     P  T        +R  G+E+    RH   H   
Sbjct: 383 PGFSPFRS------SRIGEIKEETTVSPPHTSMAPAQDEERDSGKEQGHTRRHDWGH--- 433

Query: 543 NERRRVFELGGDRPESERRRQDQGH 617
            E++R   LG       +  +DQGH
Sbjct: 434 -EKQRKHNLG----HGHKHERDQGH 453



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>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
            LL5-alpha)
          Length = 1371

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 498  EKAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQ 611
            EK ++  HA+  + +  R R  EL     E ERRR++Q
Sbjct: 1157 EKMLKEAHAEKSRLMESREREMELRRQALEEERRRREQ 1194



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>PHLB1_RAT (Q63312) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha) (Fragment)
          Length = 831

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 498 EKAIQARHAQSHKKINERRRVFELGGDRPESERRRQDQ 611
           EK ++  HA+  + +  R R  EL     E ERRR++Q
Sbjct: 617 EKMLKEAHAEKSRLMESREREMELRRQALEEERRRREQ 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,445,347
Number of Sequences: 219361
Number of extensions: 1328135
Number of successful extensions: 3252
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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