ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11i20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463564.1| Oryza sativa (japonica cultivar-group), predic... 226 6e-56
2dbj|AK070098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 6e-56
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa004... 125 2e-25
5dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
7gb|AY104201.1| Zea mays PCO093235 mRNA sequence 48 0.031
8gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, com... 44 0.48
9gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, comp... 44 0.48
10ref|NM_124136.3| Arabidopsis thaliana acyl carrier/ cofactor bin... 42 1.9
11ref|XM_644883.1| Entamoeba histolytica HM-1:IMSS CXXC-rich prote... 42 1.9
12gb|AC134177.1| Drosophila pseudoobscura FOSMID DPSF1-548A1 (Chi... 42 1.9
13gb|AY096717.1| Arabidopsis thaliana putative acyl carrier protei... 42 1.9
14gb|AY063951.1| Arabidopsis thaliana putative acyl carrier protei... 42 1.9
15gb|AY931438.1| HIV-1 isolate TZMDE620-2-6 from Tanzania envelope... 42 1.9
16gb|AY931437.1| HIV-1 isolate TZMDE620-2-5 from Tanzania envelope... 42 1.9
17gb|AY931436.1| HIV-1 isolate TZMDE620-2-4 from Tanzania envelope... 42 1.9
18dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.9
19gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, com... 40 7.5
20ref|XM_639084.1| Dictyostelium discoideum hypothetical protein (... 40 7.5
21ref|XM_630755.1| Dictyostelium discoideum hypothetical protein (... 40 7.5
22ref|XM_872624.1| PREDICTED: Bos taurus similar to steroid-sensit... 40 7.5
23ref|XM_593217.2| PREDICTED: Bos taurus similar to steroid-sensit... 40 7.5
24gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome... 40 7.5
25gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome... 40 7.5
26emb|Z71266.1|CER06C7 Caenorhabditis elegans Cosmid R06C7, comple... 40 7.5
27gb|AF003130.3| Caenorhabditis elegans cosmid F55A12, complete se... 40 7.5
28gb|AC164249.5| Medicago truncatula clone mth2-20n15, complete se... 40 7.5
29emb|AL390203.29| Human DNA sequence from clone RP11-462G8 on chr... 40 7.5
30gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome... 40 7.5
31emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in... 40 7.5
32gb|AC093252.3| Homo sapiens chromosome 5 clone RP11-15B5, comple... 40 7.5
33gb|AC116349.2| Homo sapiens chromosome 5 clone RP11-30F18, compl... 40 7.5
34gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosom... 40 7.5
35ref|NM_059178.1| Caenorhabditis elegans F55A12.1 (F55A12.1) mRNA... 40 7.5
36ref|NM_059644.3| Caenorhabditis elegans R06C7.1 (R06C7.1) mRNA, ... 40 7.5
37gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067... 40 7.5
38emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1... 40 7.5
39emb|BX248100.9| Zebrafish DNA sequence from clone CH211-222O11 i... 40 7.5
40emb|BX649429.13| Zebrafish DNA sequence from clone DKEY-1H4 in l... 40 7.5
41emb|AL929048.9| Zebrafish DNA sequence from clone CH211-161N1 in... 40 7.5
42emb|AL672188.6| Mouse DNA sequence from clone RP23-53B2 on chrom... 40 7.5 
>ref|XM_463564.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1878

 Score =  226 bits (114), Expect = 6e-56
 Identities = 228/266 (85%)
 Strand = Plus / Minus

                                                                        
Query: 286  ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
            ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 1783 ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 1724

                                                                        
Query: 346  caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
            |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 1723 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 1664

                                                                        
Query: 406  tctcatcagggatctcatacatggcctccagtagaatggtctctaagatgactcttagac 465
            |||| || |||||||||||||||||||||| ||||| | | || |||||| |||| ||||
Sbjct: 1663 tctcgtctgggatctcatacatggcctccaatagaaggctttccaagatggctctcagac 1604

                                                                        
Query: 466  cacgtgcaccagtgtttttgactatggccttctttgctactattctcagtgcaccatcag 525
            ||||||||||||| ||| || |||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1603 cacgtgcaccagtatttctggctatagccttcttggctactattctaagtgcaccatcag 1544

                                      
Query: 526  tgaagtgtagcttaacattgttcagg 551
            | ||||||| |||||| |||||||||
Sbjct: 1543 taaagtgtaacttaactttgttcagg 1518
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>dbj|AK070098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F17, full
            insert sequence
          Length = 1946

 Score =  226 bits (114), Expect = 6e-56
 Identities = 228/266 (85%)
 Strand = Plus / Minus

                                                                        
Query: 286  ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
            ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 1464 ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 1405

                                                                        
Query: 346  caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
            |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 1404 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 1345

                                                                        
Query: 406  tctcatcagggatctcatacatggcctccagtagaatggtctctaagatgactcttagac 465
            |||| || |||||||||||||||||||||| ||||| | | || |||||| |||| ||||
Sbjct: 1344 tctcgtctgggatctcatacatggcctccaatagaaggctttccaagatggctctcagac 1285

                                                                        
Query: 466  cacgtgcaccagtgtttttgactatggccttctttgctactattctcagtgcaccatcag 525
            ||||||||||||| ||| || |||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1284 cacgtgcaccagtatttctggctatagccttcttggctactattctaagtgcaccatcag 1225

                                      
Query: 526  tgaagtgtagcttaacattgttcagg 551
            | ||||||| |||||| |||||||||
Sbjct: 1224 taaagtgtaacttaactttgttcagg 1199



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 5    gcaggatggttgctcgatcaaaggcaactcctgtttacat 44
            |||||| |||||||| || ||| |||||||||||||||||
Sbjct: 1743 gcaggagggttgctcaatgaaaagcaactcctgtttacat 1704
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                            
Query: 419      ctcatacatggcctccagtagaatggtctctaagatgactcttagaccacgtgcaccagt 478
                ||||||||||||||||| ||||| | | || |||||| |||| |||||||||||||||||
Sbjct: 38514776 ctcatacatggcctccaatagaaggctttccaagatggctctcagaccacgtgcaccagt 38514835

                                                                            
Query: 479      gtttttgactatggccttctttgctactattctcagtgcaccatcagtgaagtgtagctt 538
                 ||| || |||| |||||||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct: 38514836 atttctggctatagccttcttggctactattctaagtgcaccatcagtaaagtgtaactt 38514895

                   
Query: 539      aac 541
                |||
Sbjct: 38514896 aac 38514898



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                            
Query: 286      ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
                ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 38514573 ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 38514632

                                                                            
Query: 346      caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
                |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 38514633 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 38514692

                               
Query: 406      tctcatcagggatct 420
                |||| || |||||||
Sbjct: 38514693 tctcgtctgggatct 38514707



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 5        gcaggatggttgctcgatcaaaggcaactcctgtttacat 44
                |||||| |||||||| || ||| |||||||||||||||||
Sbjct: 38514094 gcaggagggttgctcaatgaaaagcaactcctgtttacat 38514133
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>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
          Length = 193444

 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                          
Query: 419    ctcatacatggcctccagtagaatggtctctaagatgactcttagaccacgtgcaccagt 478
              ||||||||||||||||| ||||| | | || |||||| |||| |||||||||||||||||
Sbjct: 107869 ctcatacatggcctccaatagaaggctttccaagatggctctcagaccacgtgcaccagt 107928

                                                                          
Query: 479    gtttttgactatggccttctttgctactattctcagtgcaccatcagtgaagtgtagctt 538
               ||| || |||| |||||||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct: 107929 atttctggctatagccttcttggctactattctaagtgcaccatcagtaaagtgtaactt 107988

                 
Query: 539    aac 541
              |||
Sbjct: 107989 aac 107991



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                          
Query: 286    ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
              ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 107666 ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 107725

                                                                          
Query: 346    caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
              |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 107726 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 107785

                             
Query: 406    tctcatcagggatct 420
              |||| || |||||||
Sbjct: 107786 tctcgtctgggatct 107800



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 5      gcaggatggttgctcgatcaaaggcaactcctgtttacat 44
              |||||| |||||||| || ||| |||||||||||||||||
Sbjct: 107187 gcaggagggttgctcaatgaaaagcaactcctgtttacat 107226
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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434C04
          Length = 150064

 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                         
Query: 419   ctcatacatggcctccagtagaatggtctctaagatgactcttagaccacgtgcaccagt 478
             ||||||||||||||||| ||||| | | || |||||| |||| |||||||||||||||||
Sbjct: 35457 ctcatacatggcctccaatagaaggctttccaagatggctctcagaccacgtgcaccagt 35516

                                                                         
Query: 479   gtttttgactatggccttctttgctactattctcagtgcaccatcagtgaagtgtagctt 538
              ||| || |||| |||||||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct: 35517 atttctggctatagccttcttggctactattctaagtgcaccatcagtaaagtgtaactt 35576

                
Query: 539   aac 541
             |||
Sbjct: 35577 aac 35579



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                         
Query: 286   ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
             ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 35254 ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 35313

                                                                         
Query: 346   caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
             |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 35314 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 35373

                            
Query: 406   tctcatcagggatct 420
             |||| || |||||||
Sbjct: 35374 tctcgtctgggatct 35388



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 5     gcaggatggttgctcgatcaaaggcaactcctgtttacat 44
             |||||| |||||||| || ||| |||||||||||||||||
Sbjct: 34775 gcaggagggttgctcaatgaaaagcaactcctgtttacat 34814
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>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0408G07
          Length = 126631

 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                          
Query: 419    ctcatacatggcctccagtagaatggtctctaagatgactcttagaccacgtgcaccagt 478
              ||||||||||||||||| ||||| | | || |||||| |||| |||||||||||||||||
Sbjct: 100191 ctcatacatggcctccaatagaaggctttccaagatggctctcagaccacgtgcaccagt 100250

                                                                          
Query: 479    gtttttgactatggccttctttgctactattctcagtgcaccatcagtgaagtgtagctt 538
               ||| || |||| |||||||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct: 100251 atttctggctatagccttcttggctactattctaagtgcaccatcagtaaagtgtaactt 100310

                 
Query: 539    aac 541
              |||
Sbjct: 100311 aac 100313



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Plus

                                                                          
Query: 286    ttatgtactgtgccagtgcgccgtccccccgaagaattttagccccgcacccgggcctgt 345
              ||||||||||  ||| ||| ||||| |||||||||||||| || || || || ||||| |
Sbjct: 99988  ttatgtactgctccaatgcaccgtcaccccgaagaattttggctccacatcctggcctat 100047

                                                                          
Query: 346    caacggaaccaatggcctcctcatccaccacaacagcatctactcgctcgtttccggctt 405
              |||  ||||| || ||||||||||||||||||||||| |||||||| ||| |||| | ||
Sbjct: 100048 caattgaacctattgcctcctcatccaccacaacagcgtctactcgttcgcttcctgttt 100107

                             
Query: 406    tctcatcagggatct 420
              |||| || |||||||
Sbjct: 100108 tctcgtctgggatct 100122



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 5     gcaggatggttgctcgatcaaaggcaactcctgtttacat 44
             |||||| |||||||| || ||| |||||||||||||||||
Sbjct: 99509 gcaggagggttgctcaatgaaaagcaactcctgtttacat 99548
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>gb|AY104201.1| Zea mays PCO093235 mRNA sequence
          Length = 973

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 506 tattctcagtgcaccatcagtgaagtgtagcttaacattgttca 549
           |||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 740 tattctaagtgcaccatctgtaaagtgaagcttaacattattca 697
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>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence
          Length = 206320

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 266   gtttggtaagttatttcttatt 287
             ||||||||||||||||||||||
Sbjct: 83259 gtttggtaagttatttcttatt 83280
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>gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, complete sequence
          Length = 175699

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 266   gtttggtaagttatttcttatt 287
             ||||||||||||||||||||||
Sbjct: 69892 gtttggtaagttatttcttatt 69871
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>ref|NM_124136.3| Arabidopsis thaliana acyl carrier/ cofactor binding AT5G47630 mRNA,
           complete cds
          Length = 949

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 402 gctttctcatcagggatctca 422
           |||||||||||||||||||||
Sbjct: 355 gctttctcatcagggatctca 335
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>ref|XM_644883.1| Entamoeba histolytica HM-1:IMSS CXXC-rich protein (255.t00006)
            partial mRNA
          Length = 4767

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   atcaacaattacaacaaatga 63
            |||||||||||||||||||||
Sbjct: 4359 atcaacaattacaacaaatga 4379
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>gb|AC134177.1| Drosophila pseudoobscura  FOSMID DPSF1-548A1 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 46224

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   agccccgcacccgggcctgtc 346
             |||||||||||||||||||||
Sbjct: 29440 agccccgcacccgggcctgtc 29460
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>gb|AY096717.1| Arabidopsis thaliana putative acyl carrier protein (At5g47630)
           mRNA, complete cds
          Length = 427

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 402 gctttctcatcagggatctca 422
           |||||||||||||||||||||
Sbjct: 320 gctttctcatcagggatctca 300
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>gb|AY063951.1| Arabidopsis thaliana putative acyl carrier protein (At5g47630)
           mRNA, complete cds
          Length = 656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 402 gctttctcatcagggatctca 422
           |||||||||||||||||||||
Sbjct: 355 gctttctcatcagggatctca 335
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>gb|AY931438.1| HIV-1 isolate TZMDE620-2-6 from Tanzania envelope glycoprotein
           (env) gene, partial cds
          Length = 624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  ctgtttacatcaacaattacaacaaatga 63
           |||||||||||||| |||||| |||||||
Sbjct: 343 ctgtttacatcaactattacatcaaatga 371
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>gb|AY931437.1| HIV-1 isolate TZMDE620-2-5 from Tanzania envelope glycoprotein
           (env) gene, partial cds
          Length = 624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  ctgtttacatcaacaattacaacaaatga 63
           |||||||||||||| |||||| |||||||
Sbjct: 343 ctgtttacatcaactattacatcaaatga 371
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>gb|AY931436.1| HIV-1 isolate TZMDE620-2-4 from Tanzania envelope glycoprotein
           (env) gene, partial cds
          Length = 624

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 35  ctgtttacatcaacaattacaacaaatga 63
           |||||||||||||| |||||| |||||||
Sbjct: 343 ctgtttacatcaactattacatcaaatga 371
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>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7
          Length = 80117

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 402   gctttctcatcagggatctca 422
             |||||||||||||||||||||
Sbjct: 66752 gctttctcatcagggatctca 66732
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>gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, complete sequence
          Length = 180431

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   aagttatttcttattatgta 292
             ||||||||||||||||||||
Sbjct: 22563 aagttatttcttattatgta 22544
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>ref|XM_639084.1| Dictyostelium discoideum hypothetical protein (DDB0217556),
          partial mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 40 tacatcaacaattacaacaa 59
          ||||||||||||||||||||
Sbjct: 17 tacatcaacaattacaacaa 36
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>ref|XM_630755.1| Dictyostelium discoideum hypothetical protein (DDB0188794), partial
           mRNA
          Length = 1356

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  acatcaacaattacaacaaa 60
           ||||||||||||||||||||
Sbjct: 249 acatcaacaattacaacaaa 268
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>ref|XM_872624.1| PREDICTED: Bos taurus similar to steroid-sensitive protein 1,
            transcript variant 2 (LOC515235), mRNA
          Length = 3759

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  gatctcatacatggcctcca 435
            ||||||||||||||||||||
Sbjct: 1574 gatctcatacatggcctcca 1555
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>ref|XM_593217.2| PREDICTED: Bos taurus similar to steroid-sensitive protein 1,
            transcript variant 1 (LOC515235), mRNA
          Length = 4390

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  gatctcatacatggcctcca 435
            ||||||||||||||||||||
Sbjct: 1574 gatctcatacatggcctcca 1555
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>gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome 12, complete sequence
          Length = 175549

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   atggtctctaagatgactct 460
             ||||||||||||||||||||
Sbjct: 86421 atggtctctaagatgactct 86440
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>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    agttatttcttattatgtac 293
              ||||||||||||||||||||
Sbjct: 158001 agttatttcttattatgtac 157982
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>emb|Z71266.1|CER06C7 Caenorhabditis elegans Cosmid R06C7, complete sequence
          Length = 30911

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 362  ctcctcatccaccacaacagcatc 385
            |||||||||||||||||| |||||
Sbjct: 3067 ctcctcatccaccacaaccgcatc 3090
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>gb|AF003130.3| Caenorhabditis elegans cosmid F55A12, complete sequence
          Length = 45736

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 362   ctcctcatccaccacaacagcatc 385
             |||||||||||||||||| |||||
Sbjct: 29615 ctcctcatccaccacaaccgcatc 29638
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>gb|AC164249.5| Medicago truncatula clone mth2-20n15, complete sequence
          Length = 125319

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   catcaacaattacaacaaat 61
            ||||||||||||||||||||
Sbjct: 7738 catcaacaattacaacaaat 7757
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>emb|AL390203.29| Human DNA sequence from clone RP11-462G8 on chromosome 10 Contains the
             3' end of gene FLJ38950 and two novel genes, complete
             sequence
          Length = 150622

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aaatagatcacaggaaaatt 127
             ||||||||||||||||||||
Sbjct: 60477 aaatagatcacaggaaaatt 60458
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>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence
          Length = 201524

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   agttatttcttattatgtac 293
             ||||||||||||||||||||
Sbjct: 53195 agttatttcttattatgtac 53176
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>emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in linkage group 9,
              complete sequence
          Length = 173526

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    ccaaagcctcgttggtttcc 260
              ||||||||||||||||||||
Sbjct: 171231 ccaaagcctcgttggtttcc 171250
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>gb|AC093252.3| Homo sapiens chromosome 5 clone RP11-15B5, complete sequence
          Length = 143060

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    gagtttggtaagttatttct 283
              ||||||||||||||||||||
Sbjct: 100670 gagtttggtaagttatttct 100651
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>gb|AC116349.2| Homo sapiens chromosome 5 clone RP11-30F18, complete sequence
          Length = 164891

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gagtttggtaagttatttct 283
             ||||||||||||||||||||
Sbjct: 99214 gagtttggtaagttatttct 99233
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>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete
             sequence
          Length = 185536

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   atggtctctaagatgactct 460
             ||||||||||||||||||||
Sbjct: 67049 atggtctctaagatgactct 67068
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>ref|NM_059178.1| Caenorhabditis elegans F55A12.1 (F55A12.1) mRNA, complete cds
          Length = 2679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 362 ctcctcatccaccacaacagcatc 385
           |||||||||||||||||| |||||
Sbjct: 5   ctcctcatccaccacaaccgcatc 28
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>ref|NM_059644.3| Caenorhabditis elegans R06C7.1 (R06C7.1) mRNA, complete cds
          Length = 3047

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 362 ctcctcatccaccacaacagcatc 385
           |||||||||||||||||| |||||
Sbjct: 29  ctcctcatccaccacaaccgcatc 52
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>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4,
              complete sequence
          Length = 405682

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     tacatcaacaattacaacaa 59
              ||||||||||||||||||||
Sbjct: 102390 tacatcaacaattacaacaa 102371
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>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cacaggaaaattggttaaat 135
              ||||||||||||||||||||
Sbjct: 130637 cacaggaaaattggttaaat 130618
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>emb|BX248100.9| Zebrafish DNA sequence from clone CH211-222O11 in linkage group 7,
              complete sequence
          Length = 223489

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    ttggtaagttatttcttatt 287
              ||||||||||||||||||||
Sbjct: 163573 ttggtaagttatttcttatt 163554
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>emb|BX649429.13| Zebrafish DNA sequence from clone DKEY-1H4 in linkage group 7, complete
             sequence
          Length = 268480

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   ttggtaagttatttcttatt 287
             ||||||||||||||||||||
Sbjct: 78875 ttggtaagttatttcttatt 78894
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>emb|AL929048.9| Zebrafish DNA sequence from clone CH211-161N1 in linkage group 20,
             complete sequence
          Length = 149801

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ttacatcaacaattacaaca 58
             ||||||||||||||||||||
Sbjct: 80759 ttacatcaacaattacaaca 80778
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>emb|AL672188.6| Mouse DNA sequence from clone RP23-53B2 on chromosome X, complete
             sequence
          Length = 150121

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   gtggacattttacagaatat 171
             ||||||||||||||||||||
Sbjct: 54619 gtggacattttacagaatat 54638


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,166,998
Number of Sequences: 3902068
Number of extensions: 4166998
Number of successful extensions: 78337
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78222
Number of HSP's gapped (non-prelim): 115
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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