ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11i11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
2dbj|AK064887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
3gb|AY105384.1| Zea mays PCO132086 mRNA sequence 149 1e-32
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
5dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
6dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
7gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC cl... 52 0.002
8gb|AC159420.1| Trypanosoma brucei chromosome 8 clone RPCI93-26A1... 48 0.037
9gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 48 0.037
10ref|XM_818871.1| Trypanosoma brucei TREU927 clone RPCI93-26A17 h... 48 0.037
11gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, com... 44 0.58
12gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosom... 42 2.3
13ref|XM_968260.1| PREDICTED: Tribolium castaneum similar to CG122... 42 2.3
14gb|AC090515.2| Homo sapiens chromosome 15 clone RP11-30K9 map 15... 42 2.3
15gb|AC091046.2|AC091046 Homo sapiens chromosome 15 clone RP11-123... 42 2.3
16emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, co... 42 2.3
17emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chro... 42 2.3
18emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chro... 42 2.3
19gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosom... 40 9.1
20emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chr... 40 9.1
21gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome ... 40 9.1
22gb|AC121598.3| Mus musculus BAC clone RP23-300F10 from chromosom... 40 9.1
23gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, comp... 40 9.1
24gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, com... 40 9.1
25gb|AC154181.2| Mus musculus BAC clone RP24-471B11 from chromosom... 40 9.1
26dbj|AK047994.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 9.1
27gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, comple... 40 9.1
28dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 9.1
29emb|BX072563.7| Zebrafish DNA sequence from clone CH211-277G22 i... 40 9.1
30gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 9.1
31emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chro... 40 9.1
32gb|AC122871.4| Mus musculus BAC clone RP23-107P12 from 5, comple... 40 9.1 
>dbj|AK104804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C11, full
           insert sequence
          Length = 857

 Score =  155 bits (78), Expect = 2e-34
 Identities = 273/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 322 agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
           ||||| ||||||||||||  ||| |||  |||||| || || ||||| || || ||||| 
Sbjct: 743 aggggatccaggatgctgacccatgtgctgtagtcaataggcgatccaccaccaggctga 684

                                                                       
Query: 382 aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatacttg 441
           ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||||
Sbjct: 683 aggaatccgttcacaaagaagaacggtgcaccggctactcctctcgtgcacccatacttg 624

                                                                       
Query: 442 aaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatcggag 501
           || |||||||||||||| | ||| |||||  | || ||||||||||||||||| || || 
Sbjct: 623 aaggaaaccctcgctgctaggtcagtccttatatcgctgaagcctgactggaactcagac 564

                                                                       
Query: 502 actgaattaccaaccgcctgggctgccatcttcgatatctcgccggtcacagctgtgctc 561
           || |||||||| ||  || | ||||||| ||| || ||||||||  | | | | ||||||
Sbjct: 563 accgaattaccgacaacccgtgctgccagctttgacatctcgccacttataacagtgctc 504

                                                                       
Query: 562 gacatcgatgatgtcgcacggttggagaattttccctggttcttgaagaatagctccagc 621
           || |  || ||||| |||   ||| |||| || |||||| |||||||||| |||||||||
Sbjct: 503 gatagtgaggatgttgcagcattgtagaacttaccctggctcttgaagaacagctccagc 444

                                                 
Query: 622 actggataggttgacgatgagttcaacttgtttgctat 659
           |  |||||||| || ||||||||||| ||||| |||||
Sbjct: 443 aaaggataggtcgatgatgagttcaatttgttagctat 406
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>dbj|AK064887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K12, full
           insert sequence
          Length = 917

 Score =  155 bits (78), Expect = 2e-34
 Identities = 273/338 (80%)
 Strand = Plus / Minus

                                                                       
Query: 322 agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
           ||||| ||||||||||||  ||| |||  |||||| || || ||||| || || ||||| 
Sbjct: 783 aggggatccaggatgctgacccatgtgctgtagtcaataggcgatccaccaccaggctga 724

                                                                       
Query: 382 aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatacttg 441
           ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||||
Sbjct: 723 aggaatccgttcacaaagaagaacggtgcaccggctactcctctcgtgcacccatacttg 664

                                                                       
Query: 442 aaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatcggag 501
           || |||||||||||||| | ||| |||||  | || ||||||||||||||||| || || 
Sbjct: 663 aaggaaaccctcgctgctaggtcagtccttatatcgctgaagcctgactggaactcagac 604

                                                                       
Query: 502 actgaattaccaaccgcctgggctgccatcttcgatatctcgccggtcacagctgtgctc 561
           || |||||||| ||  || | ||||||| ||| || ||||||||  | | | | ||||||
Sbjct: 603 accgaattaccgacaacccgtgctgccagctttgacatctcgccacttataacagtgctc 544

                                                                       
Query: 562 gacatcgatgatgtcgcacggttggagaattttccctggttcttgaagaatagctccagc 621
           || |  || ||||| |||   ||| |||| || |||||| |||||||||| |||||||||
Sbjct: 543 gatagtgaggatgttgcagcattgtagaacttaccctggctcttgaagaacagctccagc 484

                                                 
Query: 622 actggataggttgacgatgagttcaacttgtttgctat 659
           |  |||||||| || ||||||||||| ||||| |||||
Sbjct: 483 aaaggataggtcgatgatgagttcaatttgttagctat 446
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>gb|AY105384.1| Zea mays PCO132086 mRNA sequence
          Length = 1137

 Score =  149 bits (75), Expect = 1e-32
 Identities = 180/215 (83%)
 Strand = Plus / Minus

                                                                       
Query: 322 agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
           |||||||||||||||| | ||||||||  ||||||||| || |||||||| || ||||||
Sbjct: 759 agggggtccaggatgccgatccacgtgctgtagtcgataggcgatccgcccccaggctgg 700

                                                                       
Query: 382 aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatacttg 441
           |||||||| ||||| ||||||||||||||||||   || || ||||||||||| ||||||
Sbjct: 699 aggaagccattcacaaagaagaacggcgcgccaaagactcccctcgtgcacccgtacttg 640

                                                                       
Query: 442 aaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatcggag 501
           |||||||| |||||||||  ||| ||| ||   || |||||||| ||| | || ||||| 
Sbjct: 639 aaagaaactctcgctgccgagtctgtcttcccatcgctgaagcccgacagaaactcggat 580

                                              
Query: 502 actgaattaccaaccgcctgggctgccatcttcga 536
           ||||| |||||||| | ||| || |||||||||||
Sbjct: 579 actgagttaccaacagtctgcgcagccatcttcga 545



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                       
Query: 587 agaattttccctggttcttgaagaatagctccagcactggataggttgacgatgagttca 646
           |||| ||| |||||||||||||||| |||||||||| |||||| || || ||||| ||||
Sbjct: 494 agaacttttcctggttcttgaagaacagctccagcaatggatatgtcgatgatgaattca 435

                        
Query: 647 acttgtttgctat 659
           ||||||| |||||
Sbjct: 434 acttgttagctat 422
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                            
Query: 322      agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
                ||||| ||||||||||||  ||| |||  |||||| || || ||||| || || ||||| 
Sbjct: 21053962 aggggatccaggatgctgacccatgtgctgtagtcaataggcgatccaccaccaggctga 21054021

                                                                          
Query: 382      aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatact 439
                ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||
Sbjct: 21054022 aggaatccgttcacaaagaagaacggtgcaccggctactcctctcgtgcacccatact 21054079



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 596      cctggttcttgaagaatagctccagcactggataggttgacgatgagttcaacttgtttg 655
                ||||| |||||||||| ||||||||||  |||||||| || ||||||||||| ||||| |
Sbjct: 21054607 cctggctcttgaagaacagctccagcaaaggataggtcgatgatgagttcaatttgttag 21054666

                    
Query: 656      ctat 659
                ||||
Sbjct: 21054667 ctat 21054670



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                            
Query: 438      cttgaaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatc 497
                |||||| |||||||||||||| | ||| |||||  | || ||||||||||||||||| ||
Sbjct: 21054198 cttgaaggaaaccctcgctgctaggtcagtccttatatcgctgaagcctgactggaactc 21054257

                                                                
Query: 498      ggagactgaattaccaaccgcctgggctgccatcttcgatatctcgcc 545
                 || || |||||||| ||  || | ||||||| ||| || ||||||||
Sbjct: 21054258 agacaccgaattaccgacaacccgtgctgccagctttgacatctcgcc 21054305
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                          
Query: 322    agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
              ||||| ||||||||||||  ||| |||  |||||| || || ||||| || || ||||| 
Sbjct: 146051 aggggatccaggatgctgacccatgtgctgtagtcaataggcgatccaccaccaggctga 146110

                                                                        
Query: 382    aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatact 439
              ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||
Sbjct: 146111 aggaatccgttcacaaagaagaacggtgcaccggctactcctctcgtgcacccatact 146168



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                          
Query: 596    cctggttcttgaagaatagctccagcactggataggttgacgatgagttcaacttgtttg 655
              ||||| |||||||||| ||||||||||  |||||||| || ||||||||||| ||||| |
Sbjct: 146696 cctggctcttgaagaacagctccagcaaaggataggtcgatgatgagttcaatttgttag 146755

                  
Query: 656    ctat 659
              ||||
Sbjct: 146756 ctat 146759



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                          
Query: 438    cttgaaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatc 497
              |||||| |||||||||||||| | ||| |||||  | || ||||||||||||||||| ||
Sbjct: 146287 cttgaaggaaaccctcgctgctaggtcagtccttatatcgctgaagcctgactggaactc 146346

                                                              
Query: 498    ggagactgaattaccaaccgcctgggctgccatcttcgatatctcgcc 545
               || || |||||||| ||  || | ||||||| ||| || ||||||||
Sbjct: 146347 agacaccgaattaccgacaacccgtgctgccagctttgacatctcgcc 146394
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                         
Query: 322   agggggtccaggatgctggtccacgtggcgtagtcgatcggggatccgcctccgggctgg 381
             ||||| ||||||||||||  ||| |||  |||||| || || ||||| || || ||||| 
Sbjct: 75262 aggggatccaggatgctgacccatgtgctgtagtcaataggcgatccaccaccaggctga 75321

                                                                       
Query: 382   aggaagccgttcacgaagaagaacggcgcgccagccacccctctcgtgcacccatact 439
             ||||| |||||||| ||||||||||| || || || || |||||||||||||||||||
Sbjct: 75322 aggaatccgttcacaaagaagaacggtgcaccggctactcctctcgtgcacccatact 75379



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 596   cctggttcttgaagaatagctccagcactggataggttgacgatgagttcaacttgtttg 655
             ||||| |||||||||| ||||||||||  |||||||| || ||||||||||| ||||| |
Sbjct: 75907 cctggctcttgaagaacagctccagcaaaggataggtcgatgatgagttcaatttgttag 75966

                 
Query: 656   ctat 659
             ||||
Sbjct: 75967 ctat 75970



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                         
Query: 438   cttgaaagaaaccctcgctgccatgtccgtcctcgtgtcactgaagcctgactggaaatc 497
             |||||| |||||||||||||| | ||| |||||  | || ||||||||||||||||| ||
Sbjct: 75498 cttgaaggaaaccctcgctgctaggtcagtccttatatcgctgaagcctgactggaactc 75557

                                                             
Query: 498   ggagactgaattaccaaccgcctgggctgccatcttcgatatctcgcc 545
              || || |||||||| ||  || | ||||||| ||| || ||||||||
Sbjct: 75558 agacaccgaattaccgacaacccgtgctgccagctttgacatctcgcc 75605
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>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
             sequence
          Length = 113510

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 37    atatagggtgcatatacaatcaggaaccaaagtgtacttccc 78
             ||||||| |||||||| || |||||||||||||||| |||||
Sbjct: 61992 atataggatgcatatataaccaggaaccaaagtgtatttccc 61951
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>gb|AC159420.1| Trypanosoma brucei chromosome 8 clone RPCI93-26A17, complete sequence
          Length = 142479

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 241    acaatataaaaggcacttgacatg 264
              ||||||||||||||||||||||||
Sbjct: 101168 acaatataaaaggcacttgacatg 101145
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 241    acaatataaaaggcacttgacatg 264
              ||||||||||||||||||||||||
Sbjct: 788459 acaatataaaaggcacttgacatg 788436
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>ref|XM_818871.1| Trypanosoma brucei TREU927 clone RPCI93-26A17 hypothetical protein
            (Tb927.8.2660) partial mRNA
          Length = 5760

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 241  acaatataaaaggcacttgacatg 264
            ||||||||||||||||||||||||
Sbjct: 3395 acaatataaaaggcacttgacatg 3372
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>gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, complete sequence
          Length = 193569

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 146    acaaaatactgttgatcagttt 167
              ||||||||||||||||||||||
Sbjct: 100115 acaaaatactgttgatcagttt 100094
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>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence
          Length = 131182

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 496   tcggagactgaattaccaacc 516
             |||||||||||||||||||||
Sbjct: 66049 tcggagactgaattaccaacc 66069
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>ref|XM_968260.1| PREDICTED: Tribolium castaneum similar to CG12220-PA (LOC662143),
           mRNA
          Length = 600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 191 acagcagccagcgacaacaac 211
           |||||||||||||||||||||
Sbjct: 552 acagcagccagcgacaacaac 572
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>gb|AC090515.2| Homo sapiens chromosome 15 clone RP11-30K9 map 15q21.3, complete
             sequence
          Length = 181597

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 98    taaatcactagctactacaggagta 122
             |||||||||||||||| ||||||||
Sbjct: 16502 taaatcactagctacttcaggagta 16526
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>gb|AC091046.2|AC091046 Homo sapiens chromosome 15 clone RP11-123C21 map 15q21.3, complete
              sequence
          Length = 186846

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 98     taaatcactagctactacaggagta 122
              |||||||||||||||| ||||||||
Sbjct: 159504 taaatcactagctacttcaggagta 159528
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>emb|AL929305.4| Zebrafish DNA sequence from clone DKEY-110K5, complete sequence
          Length = 166110

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tcatatagggtgcatatacaa 55
             |||||||||||||||||||||
Sbjct: 24553 tcatatagggtgcatatacaa 24533
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>emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chromosome 2, complete
             sequence
          Length = 120913

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    aagtgtacttcccttgattaa 86
             |||||||||||||||||||||
Sbjct: 58082 aagtgtacttcccttgattaa 58102
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>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete
              sequence
          Length = 230614

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 489    ctggaaatcggagactgaatt 509
              |||||||||||||||||||||
Sbjct: 110816 ctggaaatcggagactgaatt 110796
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>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence
          Length = 232201

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctactacaggagtatagtac 128
             ||||||||||||||||||||
Sbjct: 10033 ctactacaggagtatagtac 10014
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>emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chromosome 16, complete
             sequence
          Length = 200541

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tcctttggttccaacaatat 247
             ||||||||||||||||||||
Sbjct: 60932 tcctttggttccaacaatat 60951
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>gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome 13, complete sequence
          Length = 151340

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ctagctactacaggagtata 124
             ||||||||||||||||||||
Sbjct: 88304 ctagctactacaggagtata 88323
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>gb|AC121598.3| Mus musculus BAC clone RP23-300F10 from chromosome 15, complete sequence
          Length = 189823

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     cttgattaaaagccaaatga 97
              ||||||||||||||||||||
Sbjct: 156451 cttgattaaaagccaaatga 156432
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>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence
          Length = 158066

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 611   atagctccagcactggataggttg 634
             ||||||| ||||||||||||||||
Sbjct: 74696 atagctctagcactggataggttg 74719
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>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence
          Length = 191805

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     aaaagccaaatgataaatca 104
              ||||||||||||||||||||
Sbjct: 101752 aaaagccaaatgataaatca 101733
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>gb|AC154181.2| Mus musculus BAC clone RP24-471B11 from chromosome 16, complete sequence
          Length = 147226

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tcctttggttccaacaatat 247
              ||||||||||||||||||||
Sbjct: 100196 tcctttggttccaacaatat 100177
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>dbj|AK047994.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130028H04 product:myocyte enhancer
           factor 2C, full insert sequence
          Length = 1392

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 50  atacaatcaggaaccaaagtgtacttcc 77
           |||||| |||||||||||||| ||||||
Sbjct: 847 atacaaacaggaaccaaagtgcacttcc 820
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>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    catgaaatgcttacattaca 280
              ||||||||||||||||||||
Sbjct: 157575 catgaaatgcttacattaca 157556
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 604   ttgaagaatagctccagcac 623
             ||||||||||||||||||||
Sbjct: 44717 ttgaagaatagctccagcac 44698
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>emb|BX072563.7| Zebrafish DNA sequence from clone CH211-277G22 in linkage group 15,
             complete sequence
          Length = 170665

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   atataaaaggcacttgacatgaaa 267
             |||||||||||| |||||||||||
Sbjct: 43554 atataaaaggcatttgacatgaaa 43577
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     attaaaagccaaatgataaa 101
              ||||||||||||||||||||
Sbjct: 294172 attaaaagccaaatgataaa 294153
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>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete
              sequence
          Length = 206864

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctagctactacaggagtata 124
              ||||||||||||||||||||
Sbjct: 194165 ctagctactacaggagtata 194146
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>gb|AC122871.4| Mus musculus BAC clone RP23-107P12 from 5, complete sequence
          Length = 213939

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ctactacaggagtatagtac 128
             ||||||||||||||||||||
Sbjct: 42195 ctactacaggagtatagtac 42214


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,266,343
Number of Sequences: 3902068
Number of extensions: 5266343
Number of successful extensions: 90111
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89986
Number of HSP's gapped (non-prelim): 124
length of query: 667
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 644
effective length of database: 17,143,297,704
effective search space: 11040283721376
effective search space used: 11040283721376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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