Clone Name | rbasd11i03 |
---|---|
Clone Library Name | barley_pub |
>TEFF2_MOUSE (Q9QYM9) Transmembrane protein with EGF-like and two| follistatin-like domains 2 precursor (Tomoregulin) (TR) Length = 374 Score = 28.9 bits (63), Expect = 8.9 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +2 Query: 23 YKCTYISAIVESSRLLASCTVSSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKT 196 ++ I+A++ + ++ C V LC +RK R N IHR + GH + R T Sbjct: 317 FQYVLIAAVIGTIQIAVICVVV---LCITRKCPRSNRIHRQKQNTGHYSSDNTTRAST 371
>TEFF2_HUMAN (Q9UIK5) Transmembrane protein with EGF-like and two| follistatin-like domains 2 precursor (Transmembrane protein containing epidermal growth factor and follistatin domains) (Tomoregulin) (TR) (Hyperplastic polyposis protein 1) Length = 374 Score = 28.9 bits (63), Expect = 8.9 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +2 Query: 23 YKCTYISAIVESSRLLASCTVSSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKT 196 ++ I+A++ + ++ C V LC +RK R N IHR + GH + R T Sbjct: 317 FQYVLIAAVIGTIQIAVICVVV---LCITRKCPRSNRIHRQKQNTGHYSSDNTTRAST 371
>REQU_MOUSE (Q61103) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) (D4, zinc and double PHD fingers family 2) Length = 391 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 86 SSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKTH 199 S+C + W K RG + G+ ++ +PA RWR + + H Sbjct: 51 SNCYI-WMEKRHRGPGLASGQ-LYSYPARRWRKKRRAH 86
>REQU_HUMAN (Q92785) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) (D4, zinc and double PHD fingers family 2) Length = 391 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 86 SSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKTH 199 S+C + W K RG + G+ ++ +PA RWR + + H Sbjct: 51 SNCYI-WMEKRHRGPGLASGQ-LYSYPARRWRKKRRAH 86
>REQU_CHICK (P58268) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) Length = 405 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 86 SSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKTH 199 S+C + W K RG + G+ ++ +PA RWR + + H Sbjct: 51 SNCYI-WMEKRHRGPGLAAGQ-LYSYPARRWRKKRRAH 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,720,078 Number of Sequences: 219361 Number of extensions: 584934 Number of successful extensions: 1395 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1374 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1395 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)