Clone Name | rbasd11h10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1225 bits (618), Expect = 0.0 Identities = 674/698 (96%) Strand = Plus / Plus Query: 32 agatttctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaa 91 |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 79877 agatttctttactatatttagtacaattgttatatgacacatgcttttttttatggggaa 79936 Query: 92 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79937 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 79996 Query: 152 tttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgc 211 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 79997 tttagtaataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgc 80056 Query: 212 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80057 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 80116 Query: 272 aacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaac 331 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 80117 aacagtttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaac 80176 Query: 332 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80177 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 80236 Query: 392 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80237 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 80296 Query: 452 ctttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttattt 511 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80297 ctttactagtttgaaacttgtcataaataaggttattccccgcctacctttactttattt 80356 Query: 512 tgaatcnnnnnnnncttcttaatctttctattcagaattcagttaacgacgagatttagt 571 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80357 tgaatcttttttttcttcttaatctttctattcagaattcagttaacgacgagatttagt 80416 Query: 572 atcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaattt 631 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 80417 atcctttcttgcattttcataactcgtgaaatgccgagtaggcacgaattcccccaattt 80476 Query: 632 gcgacctaccataggatttgttatgtaaataggtatatgttcctttccattatgaatcgc 691 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80477 gcgacctaccataggatttgttatgtaaataggtatatgttcctttccattatgaatcgc 80536 Query: 692 aattgtatggccaaccattgtgggtagaatgctagatg 729 ||||||||||||||||||||||||||||||||||||| Sbjct: 80537 gattgtatggccaaccattgtgggtagaatgctagatg 80574 Score = 381 bits (192), Expect = e-102 Identities = 201/204 (98%) Strand = Plus / Minus Query: 526 cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134523 cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 134464 Query: 586 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 645 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134463 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 134404 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134403 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 134344 Query: 706 ccattgtgggtagaatgctagatg 729 |||||||||||||||||||||||| Sbjct: 134343 ccattgtgggtagaatgctagatg 134320
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 807 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 749 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 388 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 328 gttattccccgcttacct 311 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 170 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 169 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 110 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 109 cgggtagaatgctagatg 92
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 807 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 749 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 388 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 328 gttattccccgcttacct 311 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 170 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 169 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 110 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 109 cgggtagaatgctagatg 92
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 80109 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 80167 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 80168 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80227 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80228 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80287 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 80288 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80347 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 80348 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80407 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 80408 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80467 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 80468 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80527 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80528 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80587 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 80588 gttattccccgcttacct 80605 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 134410 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134409 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 134350 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 134349 cgggtagaatgctagatg 134332 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 80746 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 80747 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 80806 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 80807 cgggtagaatgctagatg 80824
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 80109 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 80167 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 80168 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80227 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80228 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80287 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 80288 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80347 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 80348 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80407 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 80408 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80467 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 80468 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80527 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80528 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80587 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 80588 gttattccccgcttacct 80605 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 134410 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134409 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 134350 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 134349 cgggtagaatgctagatg 134332 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 80746 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 80747 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 80806 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 80807 cgggtagaatgctagatg 80824
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 80052 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 80110 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 80111 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80170 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80171 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80230 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 80231 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80290 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 80291 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80350 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 80351 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80410 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 80411 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80470 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80471 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80530 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 80531 gttattccccgcttacct 80548 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134478 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134419 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134418 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 134359 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134358 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 134299 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 134298 cgggtagaatgctagatg 134281 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80572 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80631 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 80632 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 80691 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 80692 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 80751 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 80752 cgggtagaatgctagatg 80769
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 80097 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 80155 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 80156 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80215 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80216 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80275 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 80276 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80335 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 80336 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80395 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 80396 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80455 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 80456 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80515 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80516 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80575 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 80576 gttattccccgcttacct 80593 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134503 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134444 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134443 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 134384 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134383 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 134324 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 134323 cgggtagaatgctagatg 134306 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80615 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80674 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 80675 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 80734 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 80735 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 80794 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 80795 cgggtagaatgctagatg 80812
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 70645 aaatcttag-atggatctaaagattattttgatttctttactatatttagtacaattgtt 70587 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 70586 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 70527 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 70526 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 70467 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 70466 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 70407 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 70406 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 70347 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 70346 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 70287 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 70286 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 70227 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 70226 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 70167 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 70166 gttattccccgcttacct 70149 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 70125 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 70066 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 70065 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 70006 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 70005 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 69946 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 69945 cgggtagaatgctagatg 69928 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 53236 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 53295 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 53296 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 53355 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 53356 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 53415 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 53416 cgggtagaatgctagatg 53433
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9212532 aaatcttag-atggatctaaagattattttgatttctttactatatttagtacaattgtt 9212590 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 9212591 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9212650 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 9212651 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9212710 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9212711 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9212770 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 9212771 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9212830 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 9212831 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9212890 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 9212891 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9212950 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9212951 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9213010 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 9213011 gttattccccgcttacct 9213028 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9189572 aaatcttag-atggatctaaagattattttgatttctttactatatttagtacaattgtt 9189514 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 9189513 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9189454 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 9189453 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9189394 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9189393 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9189334 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 9189333 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9189274 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 9189273 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9189214 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 9189213 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9189154 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9189153 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9189094 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 9189093 gttattccccgcttacct 9189076 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9112619 aaatcttag-atggatctaaagattattttgatttctttactatatttagtacaattgtt 9112561 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 9112560 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9112501 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 9112500 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9112441 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9112440 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9112381 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 9112380 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9112321 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 9112320 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9112261 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 9112260 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9112201 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9112200 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9112141 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 9112140 gttattccccgcttacct 9112123 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23629454 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 23629513 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 23629514 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 23629573 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 23629574 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 23629633 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 23629634 cgggtagaatgctagatg 23629651 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9213052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9213111 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 9213112 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 9213171 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9213172 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 9213231 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 9213232 cgggtagaatgctagatg 9213249 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9189052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9188993 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 9188992 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 9188933 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9188932 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 9188873 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 9188872 cgggtagaatgctagatg 9188855 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9112099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9112040 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 9112039 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 9111980 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9111979 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 9111920 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 9111919 cgggtagaatgctagatg 9111902 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9095210 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9095269 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 9095270 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 9095329 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9095330 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 9095389 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 9095390 cgggtagaatgctagatg 9095407 Score = 141 bits (71), Expect = 4e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 214 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 273 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426 Query: 274 cagtttcctcgtagtaacgccaccgaatctc 304 |||||| |||||||||||||| |||||||| Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395 Score = 44.1 bits (22), Expect = 0.64 Identities = 28/30 (93%) Strand = Plus / Minus Query: 175 tgtcgaaatccctataatgagttgcatttg 204 ||||||||||| |||||||||| ||||||| Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagtta 556 ||||||||||||| ||||||||||| Sbjct: 21201144 aatctttctattctgaattcagtta 21201168 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 591 taactcgtaaaatgccgagtaggcacgaattct 623 |||||||| ||||||||||| || ||||||||| Sbjct: 2074046 taactcgtgaaatgccgagttggtacgaattct 2074014
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 9256962 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 9256904 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 9256903 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9256844 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 9256843 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9256784 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9256783 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9256724 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 9256723 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9256664 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 9256663 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9256604 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 9256603 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9256544 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9256543 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9256484 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 9256483 gttattccccgcttacct 9256466 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 22318512 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 22318571 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 22318572 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 22318631 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22318632 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 22318691 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 22318692 cgggtagaatgctagatg 22318709 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9256444 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9256385 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 9256384 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 9256325 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9256324 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 9256265 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 9256264 cgggtagaatgctagatg 9256247 Score = 123 bits (62), Expect = 9e-25 Identities = 91/101 (90%), Gaps = 6/101 (5%) Strand = Plus / Minus Query: 616 cgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtat------at 669 ||||||| ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 21499813 cgaattcccccaatttgcgacctgccataggatttgttatgtaaataggtatacgttaat 21499754 Query: 670 gttcctttccattatgaatcgcaattgtatggccaaccatt 710 |||||||| |||||||||||| ||||||||||||||||||| Sbjct: 21499753 gttccttttcattatgaatcgtaattgtatggccaaccatt 21499713
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 68175 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 68117 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 68116 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 68057 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 68056 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 67997 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 67996 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 67937 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 67936 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 67877 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 67876 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 67817 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 67816 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 67757 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 67756 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 67697 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 67696 gttattccccgcttacct 67679 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 67657 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 67598 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 67597 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 67538 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 67537 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 67478 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 67477 cgggtagaatgctagatg 67460
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 80049 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 80107 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 80108 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80167 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80168 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80227 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 80228 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80287 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 80288 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80347 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 80348 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80407 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 80408 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80467 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80468 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80527 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 80528 gttattccccgcttacct 80545 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134471 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134412 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134411 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 134352 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134351 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 134292 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 134291 cgggtagaatgctagatg 134274 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80568 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80627 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 80628 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 80687 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 80688 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 80747 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 80748 cgggtagaatgctagatg 80765
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 714 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 656 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 655 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 596 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 595 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 536 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 535 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 476 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 475 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 416 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 415 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 356 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 355 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 296 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 295 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 236 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 235 gttattccccgcttacct 218 Score = 303 bits (153), Expect = 4e-79 Identities = 183/193 (94%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 197 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 138 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 137 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 78 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 77 ttatgtaaataggtatatgttactttccattatgaatcgcgattgtatggccaaccattg 18 Query: 712 tgggtagaatgct 724 |||||||||||| Sbjct: 17 cgggtagaatgct 5
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 14453591 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 14453533 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 14453532 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 14453473 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 14453472 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 14453413 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14453412 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 14453353 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 14453352 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 14453293 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 14453292 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 14453233 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 14453232 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 14453173 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 14453172 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 14453113 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 14453112 gttattccccgcttacct 14453095 Score = 539 bits (272), Expect = e-150 Identities = 376/410 (91%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||| Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacct 500 ||||||| |||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 11893354 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 11893305 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14453073 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14453014 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 14453013 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 14452954 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14452953 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 14452894 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 14452893 cgggtagaatgctagatg 14452876 Score = 321 bits (162), Expect = 2e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11893284 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11893225 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 11893224 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 11893165 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11893164 ttatgtaaattggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 11893105 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 11893104 cgggtagaatgctagatg 11893087 Score = 111 bits (56), Expect = 3e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 11893799 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 11893741 Query: 63 atatgacacatg 74 |||||||||||| Sbjct: 11893740 atatgacacatg 11893729
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 27925582 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 27925640 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 27925641 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 27925700 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 27925701 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 27925760 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 27925761 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 27925820 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 27925821 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 27925880 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 27925881 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 27925940 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 27925941 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 27926000 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 27926001 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 27926060 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 27926061 gttattccccgcttacct 27926078 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14191145 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14191086 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 14191085 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 14191026 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14191025 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 14190966 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 14190965 cgggtagaatgctagatg 14190948 Score = 303 bits (153), Expect = 4e-79 Identities = 183/193 (94%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 27926099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 27926158 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 27926159 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 27926218 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 27926219 ttatgtaaataggtatatgttactttccattatgaatcgcgattgtatggccaaccattg 27926278 Query: 712 tgggtagaatgct 724 |||||||||||| Sbjct: 27926279 cgggtagaatgct 27926291 Score = 93.7 bits (47), Expect = 8e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 159 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 218 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825 Query: 219 accaact 225 ||||||| Sbjct: 10159824 accaact 10159818 Score = 71.9 bits (36), Expect = 3e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 252 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 311 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750 Query: 312 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 364 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 88940 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 88998 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 88999 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 89058 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 89059 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 89118 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 89119 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 89178 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 89179 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 89238 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 89239 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 89298 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 89299 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 89358 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 89359 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 89418 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 89419 gttattccccgcttacct 89436 Score = 303 bits (153), Expect = 4e-79 Identities = 183/193 (94%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 89457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 89516 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 89517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 89576 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 89577 ttatgtaaataggtatatgttactttccattatgaatcgcgattgtatggccaaccattg 89636 Query: 712 tgggtagaatgct 724 |||||||||||| Sbjct: 89637 cgggtagaatgct 89649
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 14916 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 14974 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 14975 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 15034 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 15035 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 15094 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 15095 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 15154 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 15155 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 15214 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 15215 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 15274 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 15275 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 15334 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 15335 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 15394 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 15395 gttattccccgcttacct 15412 Score = 303 bits (153), Expect = 4e-79 Identities = 183/193 (94%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 15433 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 15492 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 15493 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 15552 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 15553 ttatgtaaataggtatatgttactttccattatgaatcgcgattgtatggccaaccattg 15612 Query: 712 tgggtagaatgct 724 |||||||||||| Sbjct: 15613 cgggtagaatgct 15625
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 145394 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 145336 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 145335 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 145276 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 145275 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 145216 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145215 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 145156 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 145155 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 145096 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 145095 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 145036 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 145035 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 144976 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 144975 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 144916 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 144915 gttattccccgcttacct 144898 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 144876 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 144817 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 144816 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 144757 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 144756 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 144697 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 144696 cgggtagaatgctagatg 144679
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 53156 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 53098 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 53097 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 53038 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 53037 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 52978 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52977 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 52918 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 52917 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 52858 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 52857 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 52798 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 52797 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 52738 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 52737 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 52678 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 52677 gttattccccgcttacct 52660 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52638 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 52579 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 52578 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 52519 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52518 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 52459 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 52458 cgggtagaatgctagatg 52441
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 654 bits (330), Expect = 0.0 Identities = 455/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 807 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 749 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509 Query: 303 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 362 || || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449 Query: 363 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 422 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389 Query: 423 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 482 || ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 388 ctcttcttcttccttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329 Query: 483 tttattccccgcctacct 500 ||||||||||| ||||| Sbjct: 328 gttattccccgcttacct 311 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 170 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 169 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 110 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 109 cgggtagaatgctagatg 92
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 648 bits (327), Expect = 0.0 Identities = 456/499 (91%), Gaps = 2/499 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 78290 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 78348 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 78349 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 78408 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 78409 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 78468 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 78469 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 78528 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 78529 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 78588 Query: 303 tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 361 || || ||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||| Sbjct: 78589 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 78648 Query: 362 aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 78649 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 78708 Query: 422 acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 481 ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 78709 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 78768 Query: 482 gtttattccccgcctacct 500 | ||||||||||| ||||| Sbjct: 78769 ggttattccccgcttacct 78787 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78810 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 78869 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 78870 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 78929 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 78930 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 78989 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 78990 cgggtagaatgctagatg 79007
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 648 bits (327), Expect = 0.0 Identities = 456/499 (91%), Gaps = 2/499 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 12354 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 12412 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 12413 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 12472 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 12473 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 12532 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12533 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 12592 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 12593 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 12652 Query: 303 tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 361 || || ||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||| Sbjct: 12653 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 12712 Query: 362 aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 12713 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 12772 Query: 422 acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 481 ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 12773 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 12832 Query: 482 gtttattccccgcctacct 500 | ||||||||||| ||||| Sbjct: 12833 ggttattccccgcttacct 12851 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12874 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 12933 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 12934 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 12993 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12994 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 13053 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 13054 cgggtagaatgctagatg 13071
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 648 bits (327), Expect = 0.0 Identities = 456/499 (91%), Gaps = 2/499 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10371898 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 10371956 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 10371957 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 10372016 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 10372017 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 10372076 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10372077 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 10372136 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 10372137 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 10372196 Query: 303 tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 361 || || ||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||| Sbjct: 10372197 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 10372256 Query: 362 aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 10372257 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 10372316 Query: 422 acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 481 ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 10372317 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 10372376 Query: 482 gtttattccccgcctacct 500 | ||||||||||| ||||| Sbjct: 10372377 ggttattccccgcttacct 10372395 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20816614 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20816673 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 20816674 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 20816733 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20816734 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 20816793 Query: 712 tgggtagaatgctagatg 729 ||| |||||||||||||| Sbjct: 20816794 tggatagaatgctagatg 20816811 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10372418 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10372477 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 10372478 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 10372537 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10372538 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 10372597 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 10372598 cgggtagaatgctagatg 10372615 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10291881 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10291822 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 10291821 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 10291762 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10291761 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 10291702 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 10291701 cgggtagaatgctagatg 10291684
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 648 bits (327), Expect = 0.0 Identities = 456/499 (91%), Gaps = 2/499 (0%) Strand = Plus / Plus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 10377937 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 10377995 Query: 63 atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 122 |||||||||||| || || |||||||||||||||| |||||||||||||| Sbjct: 10377996 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 10378055 Query: 123 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 182 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 10378056 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 10378115 Query: 183 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 242 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10378116 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 10378175 Query: 243 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 302 |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 10378176 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 10378235 Query: 303 tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 361 || || ||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||| Sbjct: 10378236 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 10378295 Query: 362 aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 10378296 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 10378355 Query: 422 acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 481 ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 10378356 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 10378415 Query: 482 gtttattccccgcctacct 500 | ||||||||||| ||||| Sbjct: 10378416 ggttattccccgcttacct 10378434 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20827878 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20827937 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 20827938 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 20827997 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20827998 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 20828057 Query: 712 tgggtagaatgctagatg 729 ||| |||||||||||||| Sbjct: 20828058 tggatagaatgctagatg 20828075 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10378457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10378516 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 10378517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 10378576 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10378577 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 10378636 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 10378637 cgggtagaatgctagatg 10378654 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10297920 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10297861 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 10297860 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 10297801 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10297800 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 10297741 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 10297740 cgggtagaatgctagatg 10297723
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 585 bits (295), Expect = e-164 Identities = 390/421 (92%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 510 ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 82271 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82330 Query: 511 t 511 | Sbjct: 82331 t 82331 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 140376 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140317 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 140316 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 140257 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 140256 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 140197 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 140196 cattgcgggtagaatgctagatg 140174 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 82361 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82420 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 82421 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 82480 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 82481 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 82540 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 82541 cattgcgggtagaatgctagatg 82563 Score = 97.6 bits (49), Expect = 5e-17 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 1 cgaaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattg 60 ||||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 81825 cgaaatcttag-attgatctaaagattattttgatttctttactatatttagtacaattg 81883 Query: 61 ttatatgacacat 73 |||||| |||||| Sbjct: 81884 ttatattacacat 81896
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 585 bits (295), Expect = e-164 Identities = 390/421 (92%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 510 ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 82301 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82360 Query: 511 t 511 | Sbjct: 82361 t 82361 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 140446 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140387 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 140386 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 140327 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 140326 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 140267 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 140266 cattgcgggtagaatgctagatg 140244 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 82391 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82450 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 82451 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 82510 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 82511 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 82570 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 82571 cattgcgggtagaatgctagatg 82593 Score = 97.6 bits (49), Expect = 5e-17 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 1 cgaaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattg 60 ||||||||||| || ||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 81855 cgaaatcttag-attgatctaaagattattttgatttctttactatatttagtacaattg 81913 Query: 61 ttatatgacacat 73 |||||| |||||| Sbjct: 81914 ttatattacacat 81926
>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22 Length = 607 Score = 571 bits (288), Expect = e-159 Identities = 390/422 (92%), Gaps = 4/422 (0%) Strand = Plus / Minus Query: 91 aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 149 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302 Query: 270 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 329 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242 Query: 330 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 389 ||||||||| | || |||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182 Query: 390 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 449 ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||| || Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125 Query: 450 tactttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttat 509 |||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 124 tactttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttat 65 Query: 510 tt 511 || Sbjct: 64 tt 63 Score = 81.8 bits (41), Expect = 3e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 1 cgaaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattg 60 ||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 570 cgaaatcttag-attgatctaaagaccattttgatttctttactatatttagtacaattg 512 Query: 61 ttatatgacacat 73 |||||| |||||| Sbjct: 511 ttatattacacat 499 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacg 559 |||| ||||||||||||| ||||||| |||||| Sbjct: 33 ttctgaatctttctattctgaattcaattaacg 1
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 561 bits (283), Expect = e-156 Identities = 387/421 (91%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 510 ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 3410 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 3469 Query: 511 t 511 | Sbjct: 3470 t 3470 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 61618 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 61559 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 61558 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 61499 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 61498 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 61439 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 61438 cattgcgggtagaatgctagatg 61416 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 3500 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 3559 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3560 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 3619 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 3620 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 3679 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 3680 cattgcgggtagaatgctagatg 3702 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 16 gatctaaaggttatttagatttctttactatatttagtacaattgttatatgacacat 73 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2978 gatctaaagattatttagatttctttactatatttagtacaattgttatattacacat 3035
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 561 bits (283), Expect = e-156 Identities = 387/421 (91%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 510 ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 82967 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 83026 Query: 511 t 511 | Sbjct: 83027 t 83027 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 141174 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 141115 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141114 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 141055 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 141054 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 140995 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 140994 cattgcgggtagaatgctagatg 140972 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 83057 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 83116 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 83117 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 83176 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 83177 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 83236 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 83237 cattgcgggtagaatgctagatg 83259 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 16 gatctaaaggttatttagatttctttactatatttagtacaattgttatatgacacat 73 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 82535 gatctaaagattatttagatttctttactatatttagtacaattgttatattacacat 82592
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 539 bits (272), Expect = e-150 Identities = 376/410 (91%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965 Query: 331 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 390 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905 Query: 391 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 450 |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||| Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845 Query: 451 actttactagtttgaaacttgtcataaataagtttattccccgcctacct 500 ||||||| |||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 74844 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 74795 Score = 321 bits (162), Expect = 2e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 74774 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 74715 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 74714 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 74655 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 74654 ttatgtaaattggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 74595 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 74594 cgggtagaatgctagatg 74577 Score = 111 bits (56), Expect = 3e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 3 aaatcttagnatggatctaaaggttatttagatttctttactatatttagtacaattgtt 62 ||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 75289 aaatcttag-atggatctaaagattatttcgatttctttactatatttagtacaattgtt 75231 Query: 63 atatgacacatg 74 |||||||||||| Sbjct: 75230 atatgacacatg 75219
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Minus Query: 40 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 99 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467 Query: 100 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 159 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407 Query: 160 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 219 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347 Query: 220 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 279 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287 Query: 280 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 339 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227 Query: 340 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 397 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169 Query: 398 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 457 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109 Query: 458 tagtttgaaacttgtcataaataagtttattccccgcctacct 500 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 18328108 cagtttgaaacttgtcataaataagattattccccgcttacct 18328066 Score = 305 bits (154), Expect = 1e-79 Identities = 187/198 (94%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11412131 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11412190 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||| |||| |||||| Sbjct: 11412191 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcataagatttg 11412250 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11412251 ttatgtaaataggtatatgttcctttccattatgaatcgtgattgtatggccaaccattg 11412310 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 11412311 cgggtagaatgctagatg 11412328
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Minus Query: 40 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 99 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788 Query: 100 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 159 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728 Query: 160 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 219 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668 Query: 220 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 279 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608 Query: 280 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 339 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548 Query: 340 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 397 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490 Query: 398 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 457 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430 Query: 458 tagtttgaaacttgtcataaataagtttattccccgcctacct 500 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 18254429 cagtttgaaacttgtcataaataagattattccccgcttacct 18254387 Score = 305 bits (154), Expect = 1e-79 Identities = 187/198 (94%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11411802 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11411861 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||| |||| |||||| Sbjct: 11411862 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcataagatttg 11411921 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11411922 ttatgtaaataggtatatgttcctttccattatgaatcgtgattgtatggccaaccattg 11411981 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 11411982 cgggtagaatgctagatg 11411999
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Plus Query: 40 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 99 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527 Query: 100 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 159 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587 Query: 160 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 219 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647 Query: 220 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 279 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707 Query: 280 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 339 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767 Query: 340 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 397 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825 Query: 398 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 457 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885 Query: 458 tagtttgaaacttgtcataaataagtttattccccgcctacct 500 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 42886 cagtttgaaacttgtcataaataagattattccccgcttacct 42928
>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1 Length = 2729 Score = 355 bits (179), Expect = 1e-94 Identities = 201/208 (96%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 526 cttcttaatctttctattcagaat----tcagttaacgacgagatttagtatcctttctt 581 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2411 cttcttaatctttctattcagaatctgatcagttaacgacgagatttagtatcctttctt 2470 Query: 582 gcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctacc 641 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2471 gcattttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctacc 2530 Query: 642 ataggatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatgg 701 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2531 ataggatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatgg 2590 Query: 702 ccaaccattgtgggtagaatgctagatg 729 |||||||||||||||||||||||||||| Sbjct: 2591 ccaaccattgtgggtagaatgctagatg 2618
>gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 597 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 246 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 306 Query: 712 tgggtagaatgctagatg 729 |||||||||| ||||||| Sbjct: 307 tgggtagaatactagatg 324
>gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 280 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 281 ttatgtaaataggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattg 340 Query: 712 tgggtagaatgctagatg 729 |||||||||||||||||| Sbjct: 341 tgggtagaatgctagatg 358
>gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 353 bits (178), Expect = 5e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 280 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 281 ttatgtaaataggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattg 340 Query: 712 tgggtagaatgctagatg 729 |||||||||||||||||| Sbjct: 341 tgggtagaatgctagatg 358
>gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer, chloroplast sequence Length = 585 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 448 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 389 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 388 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 329 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 328 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 269 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 268 cattgcgggtagaatgctagatg 246
>gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 479 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 289 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 288 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 229 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 228 cattgcgggtagaatgctagatg 206
>gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 612 Score = 347 bits (175), Expect = 3e-92 Identities = 196/203 (96%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 147 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 206 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 207 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 266 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 267 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 326 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 327 cattgcgggtagaatgctagatg 349
>gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 317 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 316 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 257 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 256 cattgcgggtagaatgctaga 236
>gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 546 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 447 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 388 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 387 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 328 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 327 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 268 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 267 cattgcgggtagaatgctaga 247
>gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 523 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 361 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 360 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 301 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 300 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 241 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 240 cattgcgggtagaatgctaga 220
>gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 540 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 444 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 385 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 384 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 325 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 324 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 265 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 264 cattgcgggtagaatgctaga 244
>gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 317 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 316 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 257 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 256 cattgcgggtagaatgctaga 236
>gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 435 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 376 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 375 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 316 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 315 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 256 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 255 cattgcgggtagaatgctaga 235
>gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 508 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 289 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 288 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 229 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 228 cattgcgggtagaatgctaga 208
>gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 343 bits (173), Expect = 5e-91 Identities = 194/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 319 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 318 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 259 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 258 cattgcgggtagaatgctaga 238
>gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 339 bits (171), Expect = 8e-90 Identities = 195/203 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtagataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 335 bits (169), Expect = 1e-88 Identities = 193/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacccaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 542 Score = 335 bits (169), Expect = 1e-88 Identities = 193/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgggatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 335 bits (169), Expect = 1e-88 Identities = 193/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttacgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 335 bits (169), Expect = 1e-88 Identities = 193/201 (96%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 318 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 317 atttgttatgtaaatgggtatatgttcctttccattatgaatcgcgattgtatggccaac 258 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 257 cattgcgggtagaatgctaga 237
>gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 627 Score = 335 bits (169), Expect = 1e-88 Identities = 184/189 (97%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 174 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 233 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 234 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 293 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 294 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 353 Query: 721 tgctagatg 729 ||||||||| Sbjct: 354 tgctagatg 362
>gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 335 bits (169), Expect = 1e-88 Identities = 184/189 (97%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 333 bits (168), Expect = 5e-88 Identities = 180/184 (97%) Strand = Plus / Plus Query: 546 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 175 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgc 234 Query: 606 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 665 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggt 294 Query: 666 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 725 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 295 atatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgcta 354 Query: 726 gatg 729 |||| Sbjct: 355 gatg 358
>gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 331 bits (167), Expect = 2e-87 Identities = 194/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatagg 288 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 287 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 228 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 227 cattgcgggtagaatgctagatg 205
>gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 612 Score = 331 bits (167), Expect = 2e-87 Identities = 194/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 148 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 207 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 208 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 267 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 268 atttgttatataaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 327 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 328 cattgcgggtagaatgctagatg 350
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 72135 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 72194 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 72195 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 72254 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 72255 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 72314 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 72315 cgggtagaatgctagatg 72332
>gb|AF527485.1| Chloroplast transformation vector pVSR326, complete sequence Length = 9152 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 4176 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 4177 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 4236 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4237 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 4296 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 4297 cgggtagaatgctagatg 4314
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 79013 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 79072 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 79073 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 79132 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 79133 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 79192 Query: 712 tgggtagaatgctagatg 729 ||| |||||||||||||| Sbjct: 79193 tggatagaatgctagatg 79210
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 73206 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 73147 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 73146 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 73087 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 73086 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 73027 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 73026 cgggtagaatgctagatg 73009
>gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 329 bits (166), Expect = 7e-87 Identities = 194/202 (96%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 585 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379 Query: 586 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 645 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 318 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 259 Query: 706 ccattgtgggtagaatgctaga 727 |||||| ||||||||||||||| Sbjct: 258 ccattgcgggtagaatgctaga 237
>gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 329 bits (166), Expect = 7e-87 Identities = 194/202 (96%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 585 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379 Query: 586 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 645 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatag 319 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 318 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 259 Query: 706 ccattgtgggtagaatgctaga 727 |||||| ||||||||||||||| Sbjct: 258 ccattgcgggtagaatgctaga 237
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 76026 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 75967 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 75966 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 75907 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 75906 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 75847 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 75846 cgggtagaatgctagatg 75829
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 15495 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 15554 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 15555 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 15614 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 15615 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 15674 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 15675 cgggtagaatgctagatg 15692
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Plus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 134888 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134947 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 134948 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 135007 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135008 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 135067 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 135068 cgggtagaatgctagatg 135085
>dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F01, full insert sequence Length = 1123 Score = 329 bits (166), Expect = 7e-87 Identities = 190/198 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 1058 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 1057 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 998 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 997 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 938 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 937 cgggtagaatgctagatg 920
>gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacgacgagatttagtatcttttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 327 bits (165), Expect = 3e-86 Identities = 183/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19 Length = 411 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 337 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 278 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 277 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 218 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 217 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 158 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 157 cattgcgggtagaatgctagatg 135 Score = 73.8 bits (37), Expect = 7e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 467 acttgtcataaataagtttattccccgcctacctttactttattt 511 |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 411 acttgtcataaataaggttattacccgcctacctttactttattt 367
>gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 614 Score = 323 bits (163), Expect = 5e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | | Sbjct: 150 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 209 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 210 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccatagg 269 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 270 atttgttatgtaaataggtatatgttcttttccattatgaatcgcgattgtatggccaac 329 Query: 707 cattgtgggtagaatgctagatg 729 ||||| ||||||||||||||||| Sbjct: 330 cattgcgggtagaatgctagatg 352
>gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 319 bits (161), Expect = 7e-84 Identities = 191/201 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 436 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatagg 317 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 316 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 257 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 256 cattgcgggtagaatgctaga 236
>gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 533 Score = 319 bits (161), Expect = 7e-84 Identities = 191/201 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatagg 319 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 318 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 259 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 258 cattgcgggtagaatgctaga 238
>gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 319 bits (161), Expect = 7e-84 Identities = 191/201 (95%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatagg 646 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatagg 319 Query: 647 atttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaac 706 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 318 atttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaac 259 Query: 707 cattgtgggtagaatgctaga 727 ||||| ||||||||||||||| Sbjct: 258 cattgcgggtagaatgctaga 238
>gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 319 bits (161), Expect = 7e-84 Identities = 182/189 (96%) Strand = Plus / Plus Query: 541 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 600 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234 Query: 601 aatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaa 660 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcgacccaccataggatttgttatgtaaa 294 Query: 661 taggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaa 720 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 295 taggtatatgttcctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaa 354 Query: 721 tgctagatg 729 ||||||||| Sbjct: 355 tgctagatg 363
>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, ribosomal protein L22 (rpL22) gene, 5' end, transfer RNA-Ile and -His genes Length = 2789 Score = 313 bits (158), Expect = 4e-82 Identities = 188/198 (94%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 2494 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2493 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 2434 Query: 712 tgggtagaatgctagatg 729 ||| |||||||||||| Sbjct: 2433 cgggatgaatgctagatg 2416 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 440 cctagggatatactttactagtttgaaacttgtcataaataagtttattccccgcctacc 499 ||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| |||| Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtcataaataaggttattccccgcttacc 2730 Query: 500 t 500 | Sbjct: 2729 t 2729
>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, transfer RNA-Ile and -His genes and photosystem II (psbA) gene, 3' end Length = 2799 Score = 313 bits (158), Expect = 4e-82 Identities = 188/198 (94%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 2494 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2493 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccattg 2434 Query: 712 tgggtagaatgctagatg 729 ||| |||||||||||| Sbjct: 2433 cgggatgaatgctagatg 2416
>gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 543 Score = 309 bits (156), Expect = 7e-81 Identities = 189/199 (94%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 586 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 442 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 383 Query: 587 ttcataactcgtaaaatgccgagtaggcacgaattctcccaattt-gcgacctaccatag 645 |||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||| Sbjct: 382 ttcataactcgtgaaatgccgagtaggcacgaatncccccaattaagcgacctaccatag 323 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 322 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 263 Query: 706 ccattgtgggtagaatgct 724 |||||| |||||||||||| Sbjct: 262 ccattgcgggtagaatgct 244
>gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 305 bits (154), Expect = 1e-79 Identities = 176/182 (96%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 546 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 605 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 414 gaattcagt-aacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgc 356 Query: 606 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 665 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 cgagtaggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggt 296 Query: 666 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 725 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 295 atatgttcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgcta 236 Query: 726 ga 727 || Sbjct: 235 ga 234
>gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 305 bits (154), Expect = 1e-79 Identities = 191/202 (94%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 585 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 441 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 382 Query: 586 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 645 ||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 381 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 322 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 321 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 262 Query: 706 ccattgtgggtagaatgctaga 727 |||||| ||||||||||||||| Sbjct: 261 ccattgcgggtagaatgctaga 240
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 305 bits (154), Expect = 1e-79 Identities = 187/198 (94%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 124833 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 124774 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||| |||| |||||| Sbjct: 124773 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctatcataagatttg 124714 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 124713 ttatgtaaataggtatatgttcctttccattatgaatcgtgattgtatggccaaccattg 124654 Query: 712 tgggtagaatgctagatg 729 ||||||||||||||||| Sbjct: 124653 cgggtagaatgctagatg 124636
>gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 297 bits (150), Expect = 3e-77 Identities = 190/202 (94%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 527 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttg-cat 585 |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 438 ttctgaatgtttctattttgaattcagttaacgacgagatttagtatcctttcttggcac 379 Query: 586 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccatag 645 ||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||| Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcgccctaccatag 319 Query: 646 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaa 705 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 318 gatttgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaa 259 Query: 706 ccattgtgggtagaatgctaga 727 |||||| ||||||||||||||| Sbjct: 258 ccattgcgggtagaatgctaga 237
>dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12), strain:W0022 Length = 332 Score = 289 bits (146), Expect = 6e-75 Identities = 161/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12), strain:W0067 Length = 332 Score = 289 bits (146), Expect = 6e-75 Identities = 161/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12), strain:W0001 Length = 333 Score = 281 bits (142), Expect = 2e-72 Identities = 160/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1220 Length = 333 Score = 281 bits (142), Expect = 2e-72 Identities = 160/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12), strain:W0604 Length = 333 Score = 281 bits (142), Expect = 2e-72 Identities = 160/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1228 Length = 333 Score = 281 bits (142), Expect = 2e-72 Identities = 160/166 (96%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR region (RCt12), strain:SL10 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12), strain:2001-SL8 Length = 337 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt12), strain:2001-SL3 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR region (RCt12), strain:105138 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:104154 Length = 333 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W2199 Length = 336 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:103812 Length = 334 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:103887 Length = 333 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:105267 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:103318 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:101410 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:101397 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12), strain:W1635 Length = 336 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12), strain:W1625 Length = 334 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W1514 Length = 333 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W1169 Length = 334 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR region (RCt12), strain:W0652 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W0120 Length = 336 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1499 Length = 337 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W1183 Length = 336 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W2078 Length = 334 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1421 Length = 337 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W2099 Length = 334 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1650 Length = 337 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR region (RCt12) Length = 336 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W0157 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt12), strain:Tog5923 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12), strain:W1620 Length = 332 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12), strain:W1345 Length = 332 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12), strain:W0048 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:W1639 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1480B Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR region (RCt12), strain:W0018 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12), strain:W0613 Length = 335 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W1564 Length = 337 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W0043 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12), strain:W1525 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:W0614 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:NIAS WBC6 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W0015 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12), strain:W1213 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12), strain:W1181 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12), strain:W1337 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:W0002 Length = 338 Score = 274 bits (138), Expect = 4e-70 Identities = 159/166 (95%) Strand = Plus / Minus Query: 532 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 591 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107 Query: 592 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcgacctaccataggatttg 651 ||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcgacctaccataggatttg 47 Query: 652 ttatgtaaataggtatatgttcctttccattatgaatcgcaattgt 697 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 46 ttatgtaaataggtatatgttcctttccattatgaatcgcgattgt 1
>dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt12), strain:101232 Length = 338 Score = 248 bits (125), Expect = 2e-62 Identities = 143/149 (95%) Strand = Plus / Minus Query: 549 ttcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccga 608 |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 149 ttcagttaacgacgagatttagtatcttttcttgcactttcataactcgtgaaatgccga 90 Query: 609 gtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtata 668 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 gtaggcacaaattcccccaatttgcgacctaccataggatttgttatgtaaataggtata 30 Query: 669 tgttcctttccattatgaatcgcaattgt 697 ||||||||||||||||||||||| ||||| Sbjct: 29 tgttcctttccattatgaatcgcgattgt 1
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Plus Query: 169 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 228 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590 Query: 229 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 288 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650 Query: 289 aacgccac 296 || ||||| Sbjct: 212651 aaggccac 212658 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 346558 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 346617 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 346618 tgcgggtagaatgctagatg 346637
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Plus Query: 169 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 228 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612 Query: 229 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 288 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672 Query: 289 aacgccac 296 || ||||| Sbjct: 553673 aaggccac 553680 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 209151 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 209092 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 209091 tgcgggtagaatgctagatg 209072 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 80459 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 80400 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 80399 tgcgggtagaatgctagatg 80380
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Plus Query: 169 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 228 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889 Query: 229 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 288 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949 Query: 289 aacgccac 296 || ||||| Sbjct: 456950 aaggccac 456957 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 543156 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 543097 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 543096 tgcgggtagaatgctagatg 543077
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 182 bits (92), Expect = 1e-42 Identities = 119/128 (92%) Strand = Plus / Plus Query: 169 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 228 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124 Query: 229 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 288 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184 Query: 289 aacgccac 296 || ||||| Sbjct: 230185 aaggccac 230192 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 465118 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 465059 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 465058 tgcgggtagaatgctagatg 465039
>gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 149 bits (75), Expect = 2e-32 Identities = 111/123 (90%) Strand = Plus / Minus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| ||||||||||| ||| |||||| |||||||||| Sbjct: 232 gagtaggggcgaattctcccaatttgtgacctaccatacgatctgttatataaataggta 173 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 172 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 113 Query: 727 atg 729 ||| Sbjct: 112 atg 110 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 557 acgacgagatttagtatcctttcttgcat 585 ||||||||||||| |||| |||||||||| Sbjct: 276 acgacgagatttattatcgtttcttgcat 248
>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1015 Score = 149 bits (75), Expect = 2e-32 Identities = 111/123 (90%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 |||||||| |||||||||||||||| ||||||||||| ||| |||||| |||||||||| Sbjct: 643 gagtaggcgcgaattctcccaatttatgacctaccatacgatctgttatataaataggta 702 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 703 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 762 Query: 727 atg 729 ||| Sbjct: 763 atg 765 Score = 111 bits (56), Expect = 3e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||| |||| ||||||||| ||| | || || | |||||| ||||||| |||| Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441 Query: 331 cagacata 338 |||||||| Sbjct: 442 cagacata 449 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 547 aattcagttaacgacgagatttagtatcctttcttgcat 585 |||||| |||||||||||||||| |||| || ||||||| Sbjct: 589 aattcaattaacgacgagatttattatcgttccttgcat 627
>gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 143 bits (72), Expect = 9e-31 Identities = 102/112 (91%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| ||||||||||| ||| ||||| |||||||||| |||||| ||| Sbjct: 221 aattctcccaatttgtgacctaccatacgatcggttatataaataggtaaatgttctttt 162 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||||||||||||||||||||||| ||||||||||| |||| |||||| Sbjct: 161 ccattatgaatcgcaattgtatggccaatcattgtgggtataatggtagatg 110
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 143 bits (72), Expect = 9e-31 Identities = 78/80 (97%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32641 tgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccat 32582 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 32581 tgcgggtagaatgctagatg 32562 Score = 135 bits (68), Expect = 2e-28 Identities = 77/80 (96%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127222 tgttatataaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccat 127163 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 127162 tgcgggtagaatgctagatg 127143
>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1029 Score = 143 bits (72), Expect = 9e-31 Identities = 111/124 (89%) Strand = Plus / Plus Query: 606 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 665 ||||||||| |||||||||||||||| ||||||||||| || |||||| ||||||||| Sbjct: 664 cgagtaggcgcgaattctcccaatttatgacctaccatataatctgttatataaataggt 723 Query: 666 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 725 | ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| || Sbjct: 724 aaatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggta 783 Query: 726 gatg 729 |||| Sbjct: 784 gatg 787 Score = 95.6 bits (48), Expect = 2e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458 Query: 331 cagacata 338 |||||||| Sbjct: 459 cagacata 466
>gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 141 bits (71), Expect = 4e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 |||||||| ||||||||||||||||| ||||||||||| | | |||||| |||||||||| Sbjct: 232 gagtaggcgcgaattctcccaatttgtgacctaccatacggtctgttatataaataggta 173 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| |||| |||||| |||| ||| Sbjct: 172 aatgttcctttccattatgaatagcgattgtatggccaatcattttgggtataatggtag 113 Query: 727 atg 729 ||| Sbjct: 112 atg 110
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 141 bits (71), Expect = 4e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 214 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 273 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213 Query: 274 cagtttcctcgtagtaacgccaccgaatctc 304 |||||| |||||||||||||| |||||||| Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182
>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1172 Score = 141 bits (71), Expect = 4e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 |||||||| |||||||||||||||| |||||||||||| | |||||| |||||||||| Sbjct: 771 gagtaggcgcgaattctcccaatttatgacctaccatagaagctgttatataaataggta 830 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 831 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 890 Query: 727 atg 729 ||| Sbjct: 891 atg 893 Score = 87.7 bits (44), Expect = 5e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||| | |||| ||||||||| |||| | || || | |||||| || |||| |||| Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | ||| ||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522 Query: 331 cagacata 338 |||||||| Sbjct: 523 cagacata 530
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 573 tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 632 |||||||||||| ||||||||||||| ||||||||||| || | |||||| ||||||||| Sbjct: 34364792 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 34364851 Query: 633 cgacctaccataggatttgttatgtaaatagg 664 |||||||||||||||||||||||||||||||| Sbjct: 34364852 cgacctaccataggatttgttatgtaaatagg 34364883 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 703 caaccattgtgggtagaatgctagatg 729 |||||| |||||||||||||||||||| Sbjct: 15119943 caaccactgtgggtagaatgctagatg 15119917
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 573 tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 632 |||||||||||| ||||||||||||| ||||||||||| || | |||||| ||||||||| Sbjct: 47136 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 47195 Query: 633 cgacctaccataggatttgttatgtaaatagg 664 |||||||||||||||||||||||||||||||| Sbjct: 47196 cgacctaccataggatttgttatgtaaatagg 47227
>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1060 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 606 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 665 ||||||||| |||||||||||||||| ||||||||||| | |||||| ||||||||| Sbjct: 673 cgagtaggcgcgaattctcccaatttataacctaccatagcacctgttatataaataggt 732 Query: 666 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 725 | ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| || Sbjct: 733 aaatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggta 792 Query: 726 gatg 729 |||| Sbjct: 793 gatg 796 Score = 87.7 bits (44), Expect = 5e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | ||||||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467 Query: 331 cagacata 338 |||||||| Sbjct: 468 cagacata 475
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 133 bits (67), Expect = 9e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | | |||| || | |||||||| Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| |||| | | || || ||| || | | |||||||| ||| Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 86479 ataagcgtttcctcataggaacg 86501 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 86708 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 86767 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 86768 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 86819
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 133 bits (67), Expect = 9e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| |||||| ||| ||| || |||||||||| Sbjct: 148635 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgtgatataaataggta 148576 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 148575 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 148516 Query: 727 atg 729 ||| Sbjct: 148515 atg 148513 Score = 133 bits (67), Expect = 9e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| |||||| ||| ||| || |||||||||| Sbjct: 86287 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgtgatataaataggta 86346 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 86347 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 86406 Query: 727 atg 729 ||| Sbjct: 86407 atg 86409 Score = 71.9 bits (36), Expect = 3e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 |||||||||||||||| || ||| | || || ||||||||||| | ||| ||||||| | Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||| |||| ||||| | ||| | ||| || ||| |||| | |||||||| |||| Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | |||||||| || |||||||| ||||||||||| | ||| ||||| || | ||||||| Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 | | | |||||| || |||| | ||||||| |||| |||||| |||||||||||| Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930 Query: 331 cagacata 338 |||||||| Sbjct: 85931 cagacata 85938
>gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 868 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 609 gtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtata 668 |||||| ||||||||||||||||| ||||| ||||| || |||||| |||||||||||| Sbjct: 431 gtaggcgcgaattctcccaatttgtgacctttcatagaatctgttatataaataggtata 490 Query: 669 tgttcctttccattatgaatcgcaattgtatggccaaccattgtgggta 717 |||||||||||||||||||| | ||||||||||||||||||| ||||| Sbjct: 491 tgttcctttccattatgaataccgattgtatggccaaccattgagggta 539
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 128196 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 128137 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 128136 tgcgggtagaatgctagatg 128117 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33136 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 33077 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 33076 tgcgggtagaatgctagatg 33057
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127222 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 127163 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 127162 tgcgggtagaatgctagatg 127143 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32641 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 32582 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 32581 tgcgggtagaatgctagatg 32562
>gb|M16837.1|MZEMTHA1 Maize mitochondrial His-tRNA gene, 5' end Length = 510 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 152 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 153 tgcgggtagaatgctagatg 172
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127121 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 127062 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 127061 tgcgggtagaatgctagatg 127042 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32594 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 32535 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 32534 tgcgggtagaatgctagatg 32515
>dbj|D28336.1|LOLMTI Lolium multiflorum mitochondrial gene Length = 2790 Score = 127 bits (64), Expect = 6e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 153 Query: 710 tgtgggtagaatgctagatg 729 | |||||||||||||||||| Sbjct: 154 tttgggtagaatgctagatg 173
>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic spacer and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 770 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||| ||||||||| |||| |||||| ||| |||||| |||||||||| Sbjct: 386 gagtaggtgcgaattcccccaatttgtgacccaccatacgatctgttatataaataggta 445 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 446 aatgttcttttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 505 Query: 727 atg 729 ||| Sbjct: 506 atg 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 198 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 257 |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| Sbjct: 57 gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116 Query: 258 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 317 || | ||||||||||| |||||||| || |||| | ||||| | |||| |||||| Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176 Query: 318 tgtgctttgaaaacagacata 338 ||||||||||||||||||||| Sbjct: 177 tgtgctttgaaaacagacata 197 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 558 cgacgagatttagtatcctttcttgcat 585 |||||||||||| |||| |||||||||| Sbjct: 343 cgacgagatttattatcgtttcttgcat 370
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 123 bits (62), Expect = 9e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 608 agtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtat 667 ||||||| | ||||||||||||||| | ||||||||| ||| |||||| |||||||||| Sbjct: 83401 agtaggcgcaaattctcccaatttgtgtcctaccatacgatctgttatataaataggtaa 83460 Query: 668 atgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctaga 727 |||||||||||||||||| || ||||| |||||||| |||||| |||||| |||| |||| Sbjct: 83461 atgttcctttccattatggatagcaatagtatggccgaccattatgggtataatggtaga 83520 Query: 728 tg 729 || Sbjct: 83521 tg 83522 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||| ||||||||||||||| | ||| ||||||| ||||||| || | |||||| Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041 Query: 150 gctttagtaatgaataaattcgctt 174 |||||| |||| | |||||| |||| Sbjct: 83042 gctttactaatcactaaatttgctt 83066
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 123 bits (62), Expect = 9e-25 Identities = 91/101 (90%), Gaps = 6/101 (5%) Strand = Plus / Minus Query: 616 cgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtat------at 669 ||||||| ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 103808 cgaattcccccaatttgcgacctgccataggatttgttatgtaaataggtatacgttaat 103749 Query: 670 gttcctttccattatgaatcgcaattgtatggccaaccatt 710 |||||||| |||||||||||| ||||||||||||||||||| Sbjct: 103748 gttccttttcattatgaatcgtaattgtatggccaaccatt 103708
>gb|DQ069470.1| Ginkgo biloba ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||| ||||||||| ||||||||||| ||| ||||| |||||||||| |||||||||| Sbjct: 221 aattcccccaatttgtgacctaccatacgatctgttacataaataggtaaatgttccttt 162 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||||| |||||||||||||||| ||||| ||||| |||| |||||| Sbjct: 161 ccattatgaacagcaattgtatggccaatcattgcgggtacaatggtagatg 110
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| ||| |||||| |||||||||| |||||||||| Sbjct: 83945 aattctcccaatttgtgtcctaccatacgatctgttatataaataggtaaatgttccttt 84004 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||| |||||| |||||| |||| |||||| Sbjct: 84005 ccattatggatagcaatagtatggccgaccattatgggtataatggtagatg 84056
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| ||| |||||| |||||||||| |||||||||| Sbjct: 83943 aattctcccaatttgtgtcctaccatacgatctgttatataaataggtaaatgttccttt 84002 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||| |||||| |||||| |||| |||||| Sbjct: 84003 ccattatggatagcaatagtatggccgaccattatgggtataatggtagatg 84054
>dbj|D13101.1|RICMT05 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNA-His, complete sequence, clone:pMTVSCT Length = 3019 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2568 tgttatataaataggtaaatgttcctttccattatgaatggcgattgtatggccaaccat 2509 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 2508 tgcgggtagaatgctagatg 2489
>dbj|D28337.1|SRGMTI Sorghum bicolor mitochondrial gene Length = 439 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Plus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 709 |||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 94 tgttatataaataggtaaatgtccctttccattatgaatcgcgattgtatggccaaccat 153 Query: 710 tgtgggtagaatgctagatg 729 || ||||||||||||||||| Sbjct: 154 tgcgggtagaatgctagatg 173
>gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds; chloroplast Length = 228 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 181 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 122 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 121 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 62 Query: 727 atg 729 ||| Sbjct: 61 atg 59
>gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 232 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 173 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 172 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 113 Query: 727 atg 729 ||| Sbjct: 112 atg 110
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 86232 ataagcgtttcctcataggaacg 86254 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 86462 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 86521 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 86522 ccattatggatagcaatcgtatgaccgatcattgtgggtataatggtagatg 86573
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| ||||| ||| |||||| ||||||||| Sbjct: 85164 gagtaggtgcgaattctcccaatttgtgacccaccatgcgatctgttataaaaataggta 85223 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 ||||||||||||||||||||| || ||||||||||| | ||||||||||| |||| ||| Sbjct: 85224 aatgttcctttccattatgaatagcgattgtatggccgatcattgtgggtataatggtag 85283 Query: 727 atg 729 ||| Sbjct: 85284 atg 85286 Score = 81.8 bits (41), Expect = 3e-12 Identities = 197/249 (79%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 150 ||||||||||| ||| |||||| | || || |||| ||||||| || | ||||||||| Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803 Query: 151 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 210 ||||| |||||||| ||| |||| || ||| | ||| ||| | |||||||| |||| Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863 Query: 211 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 270 | |||||||||| || || |||||||||||||||||||| |||||||| | ||||| || Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923 Query: 271 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 330 ||| |||||| | ||| |||| | ||||||| |||| |||||| |||||||| | Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983 Query: 331 cagacatag 339 ||||||||| Sbjct: 84984 cagacatag 84992
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 85357 ataagcgtttcctcataggaacg 85379 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 85586 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 85645 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 85646 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 85697
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 83677 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 83736 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 726 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 83737 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 83796 Query: 727 atg 729 ||| Sbjct: 83797 atg 83799 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 198 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 257 |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437 Query: 258 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 303 || | |||||||||| |||||||| ||| |||||| ||||||| Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 86230 ataagcgtttcctcataggaacg 86252 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 86460 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 86519 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 86520 ccattatggatagcaatcgtatgaccgatcattgtgggtataatggtagatg 86571
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| |||| |||||||||||||| | |||||| Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 86001 ataagcgtttcctcataggaacg 86023 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 86232 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 86291 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 86292 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 86343
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 117 bits (59), Expect = 5e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 85369 ataagcgtttcctcataggaacg 85391 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| | ||| Sbjct: 85598 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctttttt 85657 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||||||| || ||||| ||||| || | ||||||||||| |||| Sbjct: 85658 ccattatggatagcaatagtatgaccgatcattgtgggtataatg 85702
>gb|DQ006177.1| Carex oligocarpa voucher Lea 1481 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 575 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 622 ctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttcctttccat 681 ||||||||||| ||||| ||||| || |||||| ||||||||||||||||||||||||| Sbjct: 162 ctcccaatttgtgacctttcatagaatctgttatataaataggtatatgttcctttccat 221 Query: 682 tatgaatcgcaattgtatggccaaccattgtgggta 717 ||||||| | ||||||||||||||||||| ||||| Sbjct: 222 tatgaataccgattgtatggccaaccattgagggta 257
>gb|DQ006175.1| Carex amphibola voucher Lea 1482 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 577 Score = 111 bits (56), Expect = 3e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 622 ctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttcctttccat 681 ||||||||||| ||||| ||||| || |||||| ||||||||||||||||||||||||| Sbjct: 162 ctcccaatttgtgacctttcatagaatctgttatataaataggtatatgttcctttccat 221 Query: 682 tatgaatcgcaattgtatggccaaccattgtgggta 717 ||||||| | ||||||||||||||||||| ||||| Sbjct: 222 tatgaataccgattgtatggccaaccattgagggta 257
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 85521 ataagcgtttcctcataggaacg 85543 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 85750 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 85809 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 85810 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 85861
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 85518 ataagcgtttcctcataggaacg 85540 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 85747 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 85806 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 85807 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 85858
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403 Query: 270 ataacagtttcctcgtagtaacg 292 |||| |||||||| ||| |||| Sbjct: 85404 ataagcgtttcctcataggaacg 85426 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 85633 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 85692 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||| Sbjct: 85693 ccattatggatagcaatagtatgaccgatcattgtgggtataatggtagatg 85744
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 103 bits (52), Expect = 8e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| ||||||||||| ||| ||||| |||| ||||| ||| || ||| Sbjct: 90702 aattctcccaatttgtgacctaccatacgatctgttacataaacaggtaaatgctctttt 90761 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 ||||||||||| ||||||||||| |||| ||| ||||||| |||| |||||| Sbjct: 90762 ccattatgaatagcaattgtatgaccaatcatagtgggtataatggtagatg 90813
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 103 bits (52), Expect = 8e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 90 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 149 |||||||||||||||||||||||| | |||||||||| ||||||| | |||||||| Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566 Query: 150 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 209 |||||| |||| | |||||| | || || | ||||| ||| | | | |||||||| ||| Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626 Query: 210 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 269 || ||||||||||| || || ||||||||| |||||||||| |||||||| | |||||| Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686 Query: 270 ataa 273 |||| Sbjct: 85687 ataa 85690 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| ||| |||| |||||||| | ||| |||||| Sbjct: 85937 aattctcccaatttgtggcctaccatacgatcgtttatataaataggcaaatgctccttt 85996 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||| | ||||||||||| |||| |||||| Sbjct: 85997 ccattatggatagcaatagtatggcctatcattgtgggtataatggtagatg 86048
>gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunnan Province psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 503 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagat 728 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagat 253
>gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Province psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 503 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagat 728 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagat 253
>gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 503 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagat 728 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagat 253
>gb|DQ088313.1| Androcymbium roseum subsp. roseum voucher JBM ROSEFB 2001.05047 PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His gene, partial sequence; chloroplast Length = 624 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 ||||||| |||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 213 gagtaggtgcgaattctcccaatttatgacccaccatacgatctgttatataaatgggta 272 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggta 717 |||||| ||||||||||||| ||||||||||||||| | ||||| ||||| Sbjct: 273 aatgttcttttccattatgaaccgcaattgtatggccgatcattgggggta 323
>gb|DQ069471.1| Nuphar advena ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||||||||||||||| |||||| ||| ||||| |||||||||| ||| |||||| Sbjct: 221 aattctcccaatttgcgacccaccatacgatccgttatataaataggtaaatgctccttt 162 Query: 678 ccattatgaatcgcaattgtatggccaaccattg 711 || |||||||| ||||||||||| || ||||||| Sbjct: 161 ccgttatgaatagcaattgtatgaccgaccattg 128
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||||||| | ||||||||| ||| |||||| |||||||| | ||| |||||| Sbjct: 88966 aattctcccaatttgtggcctaccatacgatctgttatataaataggaaaatgctccttt 89025 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| | ||||| |||||||| | ||||||||||| |||| |||||| Sbjct: 89026 ccattatgtacagcaatagtatggccgatcattgtgggtataatggtagatg 89077 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 91 aactacgtcctcgagctcgaggtctgaatttcttca 126 ||||||||||||||||||||||| | ||||| |||| Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 649 ttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaacca 708 ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 27691956 ttgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaacca 27692015
>gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial sequence Length = 6285 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||| ||||| | ||||||||| ||| |||||| |||||||||| |||||| ||| Sbjct: 2538 aattctcctaatttatggcctaccatacgatctgttatataaataggtaaatgttctttt 2479 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||||| |||||| |||| |||| |||||| Sbjct: 2478 ccattatggatagcaatggtatggccaatcattgtaggtataatggtagatg 2427
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||| ||||| | ||||||||| ||| |||||| |||||||||| |||||| ||| Sbjct: 2538 aattctcctaatttatggcctaccatacgatctgttatataaataggtaaatgttctttt 2479 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||||| |||||| |||| |||| |||||| Sbjct: 2478 ccattatggatagcaatggtatggccaatcattgtaggtataatggtagatg 2427
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 649 ttgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaacca 708 ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 77822 ttgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaacca 77881
>emb|AJ012137.1|ASA012137 Avena sativa mitochondrial cp-like tRNA-His (GTG) gene Length = 595 Score = 95.6 bits (48), Expect = 2e-16 Identities = 76/83 (91%), Gaps = 3/83 (3%) Strand = Plus / Plus Query: 650 tgttatgtaaataggtatatgttcctttccattatgaatcgc-aattgtatggcc--aac 706 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||| Sbjct: 182 tgttatataaataggtaaatgttcctttccattatgaatcgcgcattgtatggccaaaac 241 Query: 707 cattgtgggtagaatgctagatg 729 |||| |||||||||||||||||| Sbjct: 242 cattttgggtagaatgctagatg 264
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 8e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 311 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 370 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351 Query: 371 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 93.7 bits (47), Expect = 8e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 311 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 370 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146 Query: 371 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 8e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 311 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 370 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466 Query: 371 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415
>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22 Length = 127365 Score = 93.7 bits (47), Expect = 8e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 159 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 218 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562 Query: 219 accaact 225 ||||||| Sbjct: 18561 accaact 18555 Score = 71.9 bits (36), Expect = 3e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 252 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 311 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487 Query: 312 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 364 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 91.7 bits (46), Expect = 3e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 99 cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 158 ||||||||||||||| | ||||| |||||| |||||| | ||||||| |||||| || Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423 Query: 159 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 218 || | |||| | |||| | |||| || ||| |||| | |||||||| ||||| |||||| Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483 Query: 219 accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 278 |||||||| || ||||||||| | |||||||| ||||| || | |||||||||| ||| Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543 Query: 279 tcctcgtagtaacg 292 ||||||||| |||| Sbjct: 88544 tcctcgtaggaacg 88557 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||||||||| | ||||||||| ||| |||||| |||||||||| ||||||| || Sbjct: 88787 aattctcccaatttatggcctaccatacgatctgttatataaataggtaaatgttccctt 88846 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| ||||| || | |||||| |||| |||| |||||| Sbjct: 88847 ccattatggatagcaatagtatgaccgatcattgtaggtataatggtagatg 88898
>gb|AF369748.1|AF369748 Populus deltoides tRNA-His gene, complete sequence; and ribosomal protein S19 gene, partial cds; chloroplast genes for chloroplast products Length = 620 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||| ||||| |||| |||||| ||| |||||| |||||||||| ||| ||||| Sbjct: 486 aattctcctaatttatgacccaccatacgatctgttatataaataggtaaatgctccttc 545 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||| | ||||||||||| |||| |||||| Sbjct: 546 ccattatggatagcaatagtatggccgatcattgtgggtataatggtagatg 597 Score = 40.1 bits (20), Expect = 10.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 554 ttaacgacgagatttagtatcctttcttgcat 585 |||||||||||||||| |||| ||| |||||| Sbjct: 428 ttaacgacgagatttattatcattttttgcat 459
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||| || | ||||||||| ||| |||||| |||||||||| ||| || ||| Sbjct: 41799 aattctcccaacttatggcctaccatacgatctgttatataaataggtaaatgctctttt 41740 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||||| |||||| |||| |||| |||||| Sbjct: 41739 ccattatggatagcaatggtatggccaatcattgtaggtataatggtagatg 41688
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 87.7 bits (44), Expect = 5e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 ||||||||||| || | ||||||||| ||| |||||| |||||||||| ||| || ||| Sbjct: 96742 aattctcccaacttatggcctaccatacgatctgttatataaataggtaaatgctctttt 96683 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||| || ||||| |||||||||| |||||| |||| |||| |||||| Sbjct: 96682 ccattatggatagcaatggtatggccaatcattgtaggtataatggtagatg 96631
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 198 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 257 |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| |||||| Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296 Query: 258 aggttcagtatcataacagtttcctcgtagtaacg 292 || | |||||||||| ||||| |||||| |||| Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331 Score = 75.8 bits (38), Expect = 2e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 616 cgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttcct 675 |||||||||||||||| | ||||||||| ||| ||||| ||||| || | |||||| | Sbjct: 88582 cgaattctcccaatttatgtcctaccatacgatccgttatataaatgggcaaatgttctt 88641 Query: 676 ttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||||| || || || |||||||| | ||||||||||| |||| |||||| Sbjct: 88642 ttccattatggatagcgatagtatggccgatcattgtgggtataatggtagatg 88695
>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein Length = 5896 Score = 85.7 bits (43), Expect = 2e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 311 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 370 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469 Query: 371 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 421 |||||||| |||| |||||| ||| ||| | ||||| |||||||||||||| Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 607 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 666 |||||||| ||||||||||||||||| |||| |||||| | | ||||| |||||||||| Sbjct: 89702 gagtaggcgcgaattctcccaatttgtgacccaccatacgctccgttatataaataggta 89761 Query: 667 tatgttcctttccattatgaatcgcaattgtatggccaaccattg 711 ||| ||||| || ||||||| ||||||||||| || ||||||| Sbjct: 89762 aatgctccttcccgttatgaacagcaattgtatgaccgaccattg 89806 Score = 71.9 bits (36), Expect = 3e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 142 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 201 |||||||||||||| |||| ||||||| |||| | ||| |||||| ||| | |||| Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369 Query: 202 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 261 |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| | Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429 Query: 262 tcagtatcataa 273 ||||||||||| Sbjct: 89430 ccagtatcataa 89441
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 606 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 665 |||||||| |||||||||| |||||| |||| |||||| ||| |||||| ||||| ||| Sbjct: 78868 cgagtaggagcgaattctcctaatttgtgaccaaccatacgatctgttatataaattggt 78927 Query: 666 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggta 717 | |||||| | ||||||||||| || |||||||| |||| |||||| |||| Sbjct: 78928 aaatgttcttgtccattatgaacagctattgtatgaccaatcattgtaggta 78979
>gb|AY430760.1| Calochortus vestae PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 465 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 663 ggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| Sbjct: 134 ggtaaatgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatg 193 Query: 723 ctagatg 729 |||||| Sbjct: 194 gtagatg 200
>gb|AY430759.1| Calochortus venustus PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 465 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 663 ggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| Sbjct: 134 ggtaaatgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatg 193 Query: 723 ctagatg 729 |||||| Sbjct: 194 gtagatg 200
>gb|AY430758.1| Calochortus superbus PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 465 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 663 ggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| Sbjct: 134 ggtaaatgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatg 193 Query: 723 ctagatg 729 |||||| Sbjct: 194 gtagatg 200
>gb|AY430757.1| Calochortus splendens PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 444 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 663 ggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| Sbjct: 113 ggtaaatgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatg 172 Query: 723 ctagatg 729 |||||| Sbjct: 173 gtagatg 179
>gb|AY430756.1| Calochortus palmeri PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 444 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 663 ggtatatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatg 722 |||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| Sbjct: 113 ggtaaatgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatg 172 Query: 723 ctagatg 729 |||||| Sbjct: 173 gtagatg 179
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 77.8 bits (39), Expect = 5e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 198 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 257 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142 Query: 258 aggttcagtatcataacagtttcctcgtagtaacg 292 || | |||||||| | ||||| |||||| |||| Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177 Score = 63.9 bits (32), Expect = 7e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||||||||| |||||||||| ||| ||||| |||| ||| | ||| |||||| Sbjct: 86432 aattctcccaatttatgacctaccatgcgatccgttatataaacaggcaaatggtccttt 86491 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||||| || || ||||| |||| |||||| |||| |||| |||||| Sbjct: 86492 ccattatgaacagcgatagtatgcccaatcattgttggtataatggtagatg 86543
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 77.8 bits (39), Expect = 5e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 198 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 257 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371 Query: 258 aggttcagtatcataacagtttcctcgtagtaacg 292 || | |||||||| | ||||| |||||| |||| Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 618 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 677 |||||||||||||| |||||||||| ||| ||||| |||| ||| | ||| |||||| Sbjct: 86661 aattctcccaatttatgacctaccatgcgatccgttatataaacaggcaaatggtccttt 86720 Query: 678 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatg 729 |||||||||| ||||| ||||| |||| |||||| |||| |||| |||||| Sbjct: 86721 ccattatgaacagcaatagtatgcccaatcattgttggtataatggtagatg 86772
>gb|AY430752.1| Calochortus luteus PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 465 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 668 atgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctaga 727 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| |||| Sbjct: 139 atgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatggtaga 198 Query: 728 tg 729 || Sbjct: 199 tg 200
>gb|AY430748.1| Calochortus flexuosus PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 445 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 668 atgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctaga 727 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| |||| Sbjct: 119 atgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatggtaga 178 Query: 728 tg 729 || Sbjct: 179 tg 180
>gb|AY430746.1| Calochortus dunnii PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 445 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 668 atgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctaga 727 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| |||| Sbjct: 119 atgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatggtaga 178 Query: 728 tg 729 || Sbjct: 179 tg 180
>gb|AY430745.1| Calochortus davidsonianus PbsA (pbsA) gene and pbsA-trnH intergenic spacer, partial sequence; chloroplast Length = 445 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 668 atgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctaga 727 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| |||| Sbjct: 119 atgttcttttccattatgaatggcgattgtatggccaatcattgtgggtataatggtaga 178 Query: 728 tg 729 || Sbjct: 179 tg 180 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,228,070 Number of Sequences: 3902068 Number of extensions: 7228070 Number of successful extensions: 151041 Number of sequences better than 10.0: 495 Number of HSP's better than 10.0 without gapping: 507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148761 Number of HSP's gapped (non-prelim): 2202 length of query: 729 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 706 effective length of database: 17,143,297,704 effective search space: 12103168179024 effective search space used: 12103168179024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)