ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosom... 40 2.4
2emb|BX248080.21| Zebrafish DNA sequence from clone CH211-226C1 i... 40 2.4
3gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, comp... 38 9.5
4ref|NM_021893.2| Mus musculus CD274 antigen (Cd274), mRNA 38 9.5
5gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosom... 38 9.5
6emb|BX927068.14| Zebrafish DNA sequence from clone CH211-152F2 i... 38 9.5
7emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in... 38 9.5
8emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in... 38 9.5
9ref|XM_758137.1| Theileria parva strain Muguga chromosome 3 spli... 38 9.5
10gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, c... 38 9.5
11emb|BX571794.22| Zebrafish DNA sequence from clone DKEY-246M18 i... 38 9.5
12emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chro... 38 9.5
13emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chro... 38 9.5
14gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome... 38 9.5
15emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 ... 38 9.5
16gb|AF512525.1| Danio rerio cardiac troponin T (tnnt2) gene, comp... 38 9.5
17emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 i... 38 9.5
18emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 ... 38 9.5
19emb|BX901937.7| Zebrafish DNA sequence from clone DKEY-9I23 in l... 38 9.5
20emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in ... 38 9.5
21emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in... 38 9.5
22emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in li... 38 9.5
23emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in... 38 9.5
24emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, c... 38 9.5
25emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 i... 38 9.5
26emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 i... 38 9.5
27emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 i... 38 9.5
28dbj|AK154403.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 38 9.5
29emb|BX897657.8| Zebrafish DNA sequence from clone DKEYP-84C2, co... 38 9.5
30emb|BX572079.7| Zebrafish DNA sequence from clone DKEY-35L8 in l... 38 9.5
31emb|BX470078.6| Zebrafish DNA sequence from clone DKEYP-8C4 in l... 38 9.5
32emb|AL935033.5| Zebrafish DNA sequence from clone CH211-160F23 i... 38 9.5
33gb|AF233517.1|AF233517 Mus musculus PD-1-ligand precursor, mRNA,... 38 9.5
34emb|BX294389.5| Zebrafish DNA sequence from clone DKEY-180I4 in ... 38 9.5
35emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, c... 38 9.5
36emb|AL831758.22| Zebrafish DNA sequence from clone BUSM1-139E12 ... 38 9.5
37emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in... 38 9.5
38emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in... 38 9.5
39emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in ... 38 9.5
40emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in... 38 9.5
41emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 i... 38 9.5
42gb|BC066841.1| Mus musculus CD274 antigen, mRNA (cDNA clone MGC:... 38 9.5
43emb|AL954725.9| Zebrafish DNA sequence from clone DKEY-11H11 in ... 38 9.5
44emb|BX936406.24| Zebrafish DNA sequence from clone DKEY-13K17 in... 38 9.5
45gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, compl... 38 9.5
46emb|CR751543.9| Zebrafish DNA sequence from clone DKEY-21P19 in ... 38 9.5
47emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in ... 38 9.5
48emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 i... 38 9.5
49emb|BX293565.25| Zebrafish DNA sequence from clone DKEY-268M13 i... 38 9.5
50emb|BX465837.11| Zebrafish DNA sequence from clone DKEY-27C15 in... 38 9.5
51emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 ... 38 9.5
52emb|BX005203.7| Zebrafish DNA sequence from clone DKEY-110C1 in ... 38 9.5
53emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 i... 38 9.5
54emb|BX511024.4| Zebrafish DNA sequence from clone DKEY-15F12 in ... 38 9.5
55emb|AL662878.2| Zebrafish DNA sequence from clone BUSM1-65I4 in ... 38 9.5
56emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, c... 38 9.5
57emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in ... 38 9.5
58emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in ... 38 9.5
59emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20,... 38 9.5
60emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 i... 38 9.5
61emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in... 38 9.5 
>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 93     cacaccgatgccaaattcaaatgt 116
              ||||| ||||||||||||||||||
Sbjct: 116478 cacactgatgccaaattcaaatgt 116501
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>emb|BX248080.21| Zebrafish DNA sequence from clone CH211-226C1 in linkage group 5,
              complete sequence
          Length = 188075

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     acaacttgcatcaacacacc 98
              ||||||||||||||||||||
Sbjct: 127788 acaacttgcatcaacacacc 127769
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>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence
          Length = 218747

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    tcaaacacagacgcctcac 152
              |||||||||||||||||||
Sbjct: 155115 tcaaacacagacgcctcac 155097
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>ref|NM_021893.2| Mus musculus CD274 antigen (Cd274), mRNA
          Length = 3697

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 134  tcaaacacagacgcctcac 152
            |||||||||||||||||||
Sbjct: 3043 tcaaacacagacgcctcac 3061
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>gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosome 19, complete sequence
          Length = 166863

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 111    aaatgtctggatgtaaaagagca 133
              |||||||||| ||||||||||||
Sbjct: 142904 aaatgtctggctgtaaaagagca 142882
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>emb|BX927068.14| Zebrafish DNA sequence from clone CH211-152F2 in linkage group 1,
             complete sequence
          Length = 150851

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 85507 caacttgcatcaacacacc 85489
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>emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in linkage group 1,
             complete sequence
          Length = 74239

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 40490 caacttgcatcaacacacc 40508
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>emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in linkage group 8, complete
              sequence
          Length = 203689

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 183488 caacttgcatcaacacacc 183470
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>ref|XM_758137.1| Theileria parva strain Muguga chromosome 3 splicing factor 3B subunit
            1 (TP03_0212) partial mRNA
          Length = 3324

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aagagcatcaaacacagac 145
            |||||||||||||||||||
Sbjct: 3111 aagagcatcaaacacagac 3093
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>gb|AC119228.10| Mus musculus chromosome 19, clone RP24-209J17, complete sequence
          Length = 168362

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 134    tcaaacacagacgcctcac 152
              |||||||||||||||||||
Sbjct: 155528 tcaaacacagacgcctcac 155546
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>emb|BX571794.22| Zebrafish DNA sequence from clone DKEY-246M18 in linkage group 15,
             complete sequence
          Length = 177616

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 24704 caacttgcatcaacacacc 24686
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>emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chromosome 1 Contains the
             3' end of the PTGFRN gene for prostaglandin F2 receptor
             negative regulator, the IGSF2 gene for immunoglobulin
             superfamily member 2, a novel gene (FLJ42338), the 5' end
             of the TTF2 gene for RNA polymerase II transcription
             termination factor and a CpG island, complete sequence
          Length = 126847

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   attcaaatgtctggatgta 125
             |||||||||||||||||||
Sbjct: 38450 attcaaatgtctggatgta 38432
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>emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0916) and two CpG islands,
             complete sequence
          Length = 154682

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 100   atgccaaattcaaatgtct 118
             |||||||||||||||||||
Sbjct: 35463 atgccaaattcaaatgtct 35481
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>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence
          Length = 275852

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 111    aaatgtctggatgtaaaagagca 133
              |||||||||| ||||||||||||
Sbjct: 115021 aaatgtctggctgtaaaagagca 114999
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>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6,
             complete sequence
          Length = 162560

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 75577 caacttgcatcaacacacc 75559
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>gb|AF512525.1| Danio rerio cardiac troponin T (tnnt2) gene, complete cds
          Length = 34713

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 13212 caacttgcatcaacacacc 13230
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>emb|AL662880.6| Zebrafish DNA sequence from clone BUSM1-182N13 in linkage group 23
             Contains a novel gene similar to PHLDA3, part of two novel
             genes, a gene for a novel troponin I, the tnnt2 gene for
             cardiac troponin T2 and three CpG islands, complete
             sequence
          Length = 103409

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 89882 caacttgcatcaacacacc 89900
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>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13,
              complete sequence
          Length = 186151

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 118728 caacttgcatcaacacacc 118746
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>emb|BX901937.7| Zebrafish DNA sequence from clone DKEY-9I23 in linkage group 1,
            complete sequence
          Length = 204746

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   caacttgcatcaacacacc 98
            |||||||||||||||||||
Sbjct: 4481 caacttgcatcaacacacc 4463
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>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13, complete
              sequence
          Length = 166823

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 105003 caacttgcatcaacacacc 104985
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>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5,
             complete sequence
          Length = 168673

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 57738 caacttgcatcaacacacc 57756
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>emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in linkage group 25, complete
             sequence
          Length = 87559

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 41471 caacttgcatcaacacacc 41453
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>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1,
              complete sequence
          Length = 188290

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 169825 caacttgcatcaacacacc 169807
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>emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, complete sequence
          Length = 181466

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 71520 caacttgcatcaacacacc 71538
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>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14,
             complete sequence
          Length = 204730

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 89430 caacttgcatcaacacacc 89448
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>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19,
              complete sequence
          Length = 168538

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 111281 caacttgcatcaacacacc 111299
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>emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 in linkage group 3,
              complete sequence
          Length = 145520

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 131437 caacttgcatcaacacacc 131419
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>dbj|AK154403.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630027J10
            product:programmed cell death 1 ligand 1, full insert
            sequence
          Length = 3623

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 134  tcaaacacagacgcctcac 152
            |||||||||||||||||||
Sbjct: 3039 tcaaacacagacgcctcac 3057
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>emb|BX897657.8| Zebrafish DNA sequence from clone DKEYP-84C2, complete sequence
          Length = 194258

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 34615 caacttgcatcaacacacc 34597
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>emb|BX572079.7| Zebrafish DNA sequence from clone DKEY-35L8 in linkage group 15,
             complete sequence
          Length = 192849

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 80905 caacttgcatcaacacacc 80887
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>emb|BX470078.6| Zebrafish DNA sequence from clone DKEYP-8C4 in linkage group 5, complete
              sequence
          Length = 184333

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 130700 caacttgcatcaacacacc 130682
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>emb|AL935033.5| Zebrafish DNA sequence from clone CH211-160F23 in linkage group 17,
             complete sequence
          Length = 162648

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 93288 caacttgcatcaacacacc 93306
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>gb|AF233517.1|AF233517 Mus musculus PD-1-ligand precursor, mRNA, complete cds
          Length = 3593

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 134  tcaaacacagacgcctcac 152
            |||||||||||||||||||
Sbjct: 2993 tcaaacacagacgcctcac 3011
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>emb|BX294389.5| Zebrafish DNA sequence from clone DKEY-180I4 in linkage group 5,
             complete sequence
          Length = 144422

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 77128 caacttgcatcaacacacc 77146
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>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence
          Length = 219044

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 217421 caacttgcatcaacacacc 217439
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>emb|AL831758.22| Zebrafish DNA sequence from clone BUSM1-139E12 in linkage group 23,
             complete sequence
          Length = 106523

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 55264 caacttgcatcaacacacc 55246
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>emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in linkage group 20,
             complete sequence
          Length = 159939

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 32720 caacttgcatcaacacacc 32702
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>emb|BX276083.4| Zebrafish DNA sequence from clone CH211-165N1 in linkage group 17,
            complete sequence
          Length = 133128

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   caacttgcatcaacacacc 98
            |||||||||||||||||||
Sbjct: 6993 caacttgcatcaacacacc 6975
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>emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in linkage group 7,
             complete sequence
          Length = 223845

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 33003 caacttgcatcaacacacc 32985
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>emb|BX548066.3| Zebrafish DNA sequence from clone CH211-226F1 in linkage group 20,
              complete sequence
          Length = 185926

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 108203 caacttgcatcaacacacc 108185
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>emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 in linkage group 18,
             complete sequence
          Length = 159822

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 45205 caacttgcatcaacacacc 45187
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>gb|BC066841.1| Mus musculus CD274 antigen, mRNA (cDNA clone MGC:76638
            IMAGE:30101931), complete cds
          Length = 3697

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 134  tcaaacacagacgcctcac 152
            |||||||||||||||||||
Sbjct: 3043 tcaaacacagacgcctcac 3061
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>emb|AL954725.9| Zebrafish DNA sequence from clone DKEY-11H11 in linkage group 23,
            complete sequence
          Length = 219971

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   caacttgcatcaacacacc 98
            |||||||||||||||||||
Sbjct: 3410 caacttgcatcaacacacc 3392
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>emb|BX936406.24| Zebrafish DNA sequence from clone DKEY-13K17 in linkage group 17,
              complete sequence
          Length = 183483

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    tgccaaattcaaatgtctg 119
              |||||||||||||||||||
Sbjct: 152014 tgccaaattcaaatgtctg 152032
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>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence
          Length = 189515

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    aagaacaacttgcatcaac 93
             |||||||||||||||||||
Sbjct: 86498 aagaacaacttgcatcaac 86480
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>emb|CR751543.9| Zebrafish DNA sequence from clone DKEY-21P19 in linkage group 19,
             complete sequence
          Length = 51804

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 49361 caacttgcatcaacacacc 49343
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>emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in linkage group 7,
             complete sequence
          Length = 113842

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 33766 caacttgcatcaacacacc 33748
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>emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 in linkage group 20,
              complete sequence
          Length = 200617

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 150191 caacttgcatcaacacacc 150173
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>emb|BX293565.25| Zebrafish DNA sequence from clone DKEY-268M13 in linkage group 22,
              complete sequence
          Length = 160930

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 143191 caacttgcatcaacacacc 143209
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>emb|BX465837.11| Zebrafish DNA sequence from clone DKEY-27C15 in linkage group 19,
              complete sequence
          Length = 206154

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 112581 caacttgcatcaacacacc 112599
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>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19,
              complete sequence
          Length = 130807

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 106799 caacttgcatcaacacacc 106817
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>emb|BX005203.7| Zebrafish DNA sequence from clone DKEY-110C1 in linkage group 22,
             complete sequence
          Length = 214843

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 14759 caacttgcatcaacacacc 14741
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>emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 in linkage group 20,
             complete sequence
          Length = 134837

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 41106 caacttgcatcaacacacc 41088
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>emb|BX511024.4| Zebrafish DNA sequence from clone DKEY-15F12 in linkage group 20,
             complete sequence
          Length = 66927

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 12953 caacttgcatcaacacacc 12935
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>emb|AL662878.2| Zebrafish DNA sequence from clone BUSM1-65I4 in linkage group 23,
             complete sequence
          Length = 51626

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 38407 caacttgcatcaacacacc 38425
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>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence
          Length = 187201

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 142860 caacttgcatcaacacacc 142842
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>emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in linkage group 8, complete
              sequence
          Length = 186836

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 121291 caacttgcatcaacacacc 121309
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>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete
              sequence
          Length = 272535

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 258253 caacttgcatcaacacacc 258271
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>emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20, complete sequence
          Length = 187914

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caacttgcatcaacacacc 98
              |||||||||||||||||||
Sbjct: 133526 caacttgcatcaacacacc 133508
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>emb|AL954313.6| Zebrafish DNA sequence from clone CH211-257J20 in linkage group 11,
             complete sequence
          Length = 156381

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 18290 caacttgcatcaacacacc 18272
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>emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in linkage group 11,
             complete sequence
          Length = 137302

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    caacttgcatcaacacacc 98
             |||||||||||||||||||
Sbjct: 25216 caacttgcatcaacacacc 25198


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,459,218
Number of Sequences: 3902068
Number of extensions: 1459218
Number of successful extensions: 95737
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95609
Number of HSP's gapped (non-prelim): 128
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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