>Y819_PASMU (Q9CMK4) Hypothetical protein PM0819|
          Length = 172

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = -3

Query: 367 ALQRRDQDQEQPPLKKRK------TGVLDRQLRSGTTPCLLL-FWLSKS 242
           A+QRR  D+E+    KR        G+LD+ L+  T+P  LL +W  K+
Sbjct: 83  AIQRRLHDKEKQLAHKRSQQVEDYAGILDKWLKERTSPVYLLWYWQDKN 131

>UL31_EBV (P03183) Protein BFLF2|
          Length = 318

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 42  LRRPHHPHERIYTWSAHKVHTYTHHSLACGEQRAN*GNKRKL 167
           LRR  HPH R YT S    H+    S  CG+ R+  G   ++
Sbjct: 21  LRRLMHPHHRNYTASKASAHSVKSVS-RCGKSRSELGRMERV 61

>NOL11_CHICK (Q5ZL79) Nucleolar protein 11|
          Length = 723

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 288 DLGRRHVCCSFGYLNPAYVRCCPRLHVVSPKLSSTTILVLVTFFCYL 148
           DL  +       YL+  YV+C  +++   P + S TI  ++ + C L
Sbjct: 612 DLPAQQAVLFLRYLHYLYVKCSEKINTTLPGILSPTISQIMDWMCLL 658

>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)|
           (SUMO1-protein E3 ligase Topors) (Topoisomerase
           I-binding RING finger protein) (Topoisomerase I-binding
           arginine/serine-rich protein) (dTopors)
          Length = 1038

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 156 CYLSLLFARRMLASDGCMCVLCVRSMCKFSRV 61
           C + L   RR   +D CM   C + +C++S++
Sbjct: 102 CAICLSRCRRKCFTDSCMHQFCFKCLCEWSKI 133

>POLS_SFV (P03315) Structural polyprotein (p130) [Contains: Capsid protein (EC|
            3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein
            (Spike glycoprotein E3); E2 envelope glycoprotein (Spike
            glycoprotein E2); 6K protein; E1 envelope glycoprotein
            (Spike gly
          Length = 1253

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
 Frame = +2

Query: 95   STHIHPSLASMRRAKSKLR*QKKVT--------STSIVVLLSLGETTCS 217
            S H H ++A+++ A +K++   KVT        S S VV L     TCS
Sbjct: 1144 SVHSHSNVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCS 1192

>YCED_SALTY (P0A1T2) Hypothetical protein yceD (G30K)|
          Length = 173

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 67  REFTHGAHTKYTHTPITR*HAASKEQTEVTKESYK 171
           + FTH  HT Y  +P+      S EQ E   E+Y+
Sbjct: 78  KPFTHQVHTTYCFSPV-----RSDEQAEALPEAYE 107

>YCED_SALTI (P0A1T3) Hypothetical protein yceD|
          Length = 173

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 67  REFTHGAHTKYTHTPITR*HAASKEQTEVTKESYK 171
           + FTH  HT Y  +P+      S EQ E   E+Y+
Sbjct: 78  KPFTHQVHTTYCFSPV-----RSDEQAEALPEAYE 107

>MURA_HAEIN (P45025) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC|
           2.5.1.7) (Enoylpyruvate transferase)
           (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
          Length = 424

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 204 KLHAASDSNVRTQDLDNQKSSKHGVVPDRSCRSSTPVFLFFSGGC 338
           K+  A  +++  + ++     +H VVPDR    +  +    SGGC
Sbjct: 206 KITGAGSAHITIEGVERLTGCEHSVVPDRIETGTFLIAAAISGGC 250


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,099,561
Number of Sequences: 219361
Number of extensions: 876923
Number of successful extensions: 2393
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)