ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11g21 |
|---|---|
| Clone Library Name | barley_pub |
>HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 526 Score = 202 bits (515), Expect = 6e-52 Identities = 97/114 (85%), Positives = 99/114 (86%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 IKHWGRVPALGCEPTFI+DLADAVIESLPYVGAMAVSNLEARQ LVPLGSVEELLAAYDS Sbjct: 410 IKHWGRVPALGCEPTFITDLADAVIESLPYVGAMAVSNLEARQPLVPLGSVEELLAAYDS 469 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGILP 324 KRD LPPPV VWEWGWTKSAETWNGR LEVTTG+G LHQWGILP Sbjct: 470 KRDELPPPVTVWEWGWTKSAETWNGRAAMLAVLALLVLEVTTGEGFLHQWGILP 523
>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 Score = 187 bits (474), Expect = 3e-47 Identities = 91/116 (78%), Positives = 96/116 (82%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 IK+WGRVPALG EP FISDLADAV+ESLPYVGAMAVSNLEARQSLVPLGSVEELLA YDS Sbjct: 397 IKNWGRVPALGTEPMFISDLADAVVESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDS 456 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGILPPL 318 +R LP PV +WEWGWTKSAETWNGR LEVTTG+G LHQWGILP L Sbjct: 457 QRRELPAPVTMWEWGWTKSAETWNGRAAMLAVLALLVLEVTTGKGFLHQWGILPSL 512
>HEMH_ANASP (Q8YQR8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 57.4 bits (137), Expect = 4e-08 Identities = 39/113 (34%), Positives = 52/113 (46%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 I ++ RVPA P FI LAD VI++L + L +++++ Y Sbjct: 295 IHNFRRVPAPNTHPVFIRALADLVIDALN----------KPSFKLSQAAQIKKMVKMY-- 342 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 P WEWG T SAE WNGR +E+ TGQGLLH G+L Sbjct: 343 -------PPESWEWGMTSSAEVWNGR-IAMLGFIALIIELVTGQGLLHMIGLL 387
>HEMH_HORVU (P42045) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 484 Score = 57.0 bits (136), Expect = 5e-08 Identities = 26/44 (59%), Positives = 33/44 (75%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQS 534 I++WGRVPALGC +FISDLADAV+E+LP AMA ++ S Sbjct: 405 IENWGRVPALGCTSSFISDLADAVVEALPSASAMATRKVKDTDS 448
>HEMH1_ARATH (P42043) Ferrochelatase-1, chloroplast/mitochondrial precursor (EC| 4.99.1.1) (Ferrochelatase I) (Protoheme ferro-lyase 1) (Heme synthetase 1) Length = 466 Score = 54.3 bits (129), Expect = 3e-07 Identities = 25/38 (65%), Positives = 31/38 (81%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSN 552 +++WGRVPALG P+FI+DLADAVIESLP AM+ N Sbjct: 386 VENWGRVPALGLTPSFITDLADAVIESLPSAEAMSNPN 423
>HEMH_CUCSA (P42044) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 514 Score = 52.8 bits (125), Expect = 9e-07 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMA 561 I++WGRVPAL C +FISDLADAVIE+LP A+A Sbjct: 411 IQNWGRVPALNCNSSFISDLADAVIEALPSATALA 445
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 52.4 bits (124), Expect = 1e-06 Identities = 37/113 (32%), Positives = 53/113 (46%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 I+ + RVPAL P FI DL+D V ++L + R L + + + + Y Sbjct: 295 IERFLRVPALNTHPLFIQDLSDLVEQTLE----------QPRFRLEDVTLLPKKVKLYPQ 344 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 +R WEWG T +AE WNGR +E+ TG+G LH G+L Sbjct: 345 ER---------WEWGITLNAEVWNGR-IAMLGFLALLVELLTGRGPLHALGLL 387
>HEMH_PROMP (Q7V2F5) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 52.0 bits (123), Expect = 2e-06 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQSLVPLGSVEELLAAY 492 I ++ RV AL PTFI L++ V+ L P + S L + L P Sbjct: 299 IVNFRRVKALNTHPTFIDGLSELVVSCLEGPIINIEKASELPEKVKLYPQEK-------- 350 Query: 491 DSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 W+WGW S+E WNGR +E+ +G G LH+ GIL Sbjct: 351 -------------WQWGWNNSSEVWNGR-VAMIVFLILFIELISGSGPLHKLGIL 391
>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 51.6 bits (122), Expect = 2e-06 Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 2/115 (1%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQSLVPLGSVEELLAAY 492 + ++ RV AL P FI LAD V SL P V A + L + L P Sbjct: 299 VVNFRRVRALDTYPPFIEGLADLVTTSLEGPEVSLDAAAELPTKVKLYPQEK-------- 350 Query: 491 DSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 WEWGW S+E WNGR LE+ +G G LH G+L Sbjct: 351 -------------WEWGWNNSSEVWNGR-LAMLGFSAFLLELISGHGPLHALGLL 391
>HEMH_SYNY3 (P54225) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 50.4 bits (119), Expect = 5e-06 Identities = 38/113 (33%), Positives = 51/113 (45%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 I ++ RVPAL P FI LA V++SL ++ VP Sbjct: 295 IDNFQRVPALNTHPVFIDALAQMVMDSL--------NDPPCTFETVP-----------HP 335 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 K++M P WEWG T +AE WNGR +E+ +GQG LH G+L Sbjct: 336 KKNMKMYPQERWEWGLTTAAEVWNGR-LAMLGFIALLVELISGQGPLHFVGLL 387
>HEMH_PROMM (Q7V6C6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 49.7 bits (117), Expect = 8e-06 Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESL--PYVGAMAVSNLEARQSLVPLGSVEELLAAY 492 I H+ RVPAL PTFI LAD V SL P + + L R P Sbjct: 299 IVHFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVKFYPQER-------- 350 Query: 491 DSKRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 W+WG S+E WNGR LE+ +G G LH G+L Sbjct: 351 -------------WQWGLNTSSEAWNGR-IAMLGFAAFLLELISGHGPLHAIGLL 391
>HEMH_PROMA (Q7VD58) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 47.0 bits (110), Expect = 5e-05 Identities = 37/113 (32%), Positives = 48/113 (42%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 I ++ RV AL P FI+ LAD V A +S E SL + E + Y Sbjct: 299 IINFRRVKALDTYPLFINGLADLV--------ASCLSGPEI--SLDEAAKLPEKVKLYPQ 348 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 ++ W+WGW SAE WNGR E+ G G LH G+L Sbjct: 349 EK---------WQWGWNNSAEVWNGR-VAMFVFIICFFELVIGNGPLHYIGLL 391
>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 47.0 bits (110), Expect = 5e-05 Identities = 39/113 (34%), Positives = 51/113 (45%) Frame = -3 Query: 665 IKHWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDS 486 I+ + RVPAL FIS LA V E+L A + E QS + + Y Sbjct: 296 IEVFRRVPALNDHNGFISALAQLVKEAL---AAPPRTFAEVNQS-------RKRVKLYPQ 345 Query: 485 KRDMLPPPVIVWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 +R WEWG T +AE WNGR +E+ +GQG LH G+L Sbjct: 346 ER---------WEWGMTSAAERWNGR-LAMLGFLALMIELISGQGPLHMLGLL 388
>YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17| Length = 49 Score = 47.0 bits (110), Expect = 5e-05 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = -3 Query: 455 VWEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 +W WG+T AE WNGR E TGQG LH GIL Sbjct: 7 IWNWGFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGIL 49
>YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)| Length = 48 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/42 (45%), Positives = 26/42 (61%) Frame = -3 Query: 452 WEWGWTKSAETWNGRXXXXXXXXXXXLEVTTGQGLLHQWGIL 327 W WG+T SAETWNGR +E+ TG+GLL+ G++ Sbjct: 6 WFWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSGLM 47
>ATP4_PEA (Q41000) ATP synthase delta' chain, mitochondrial precursor (EC| 3.6.3.14) Length = 197 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/95 (24%), Positives = 39/95 (41%) Frame = +1 Query: 148 SSIFTPVNSVHTFLSWRKANRSIIIYSIRTFPNEPKLPSDPLKGRPEIHPSIPAYQGRGG 327 + + TP + +WRK + +I + PK P + LK RP + +IP Sbjct: 21 TDVATPATNSSFVEAWRKVSPNI---------DPPKTPLEFLKTRPPVPSTIPTKLTVNF 71 Query: 328 KIPHWCKSPCPVVTSSTRRANTASIAARPFHVSAL 432 +P+ + V S A T + P HV+ + Sbjct: 72 VLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATI 106
>Y378_MYCLE (Q49857) Hypothetical protein ML0378 precursor| Length = 359 Score = 29.6 bits (65), Expect = 8.5 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 271 LKGRPEIHPSIPAYQGRGGKIPHWCKSPCPVVTSSTRRANTASIAA 408 L G P P P G +P W SP P+V RR + I A Sbjct: 162 LFGLPLCEPIYPTPAGLVAAVPDWSVSPIPLVALYLRRPDAKPITA 207
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 29.6 bits (65), Expect = 8.5 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Frame = +1 Query: 190 SWRKANRSIIIYSIRTF-------PNEPKLPSDPLKGRPEIHPSIPAYQGRGGKIPHWCK 348 SW + + ++++ + P E +L +DP GRP +P +G G + W + Sbjct: 88 SWLRRGVLVTLHAVLPYLLDKVLLPLEQELQADPDSGRPSQGSLVPGGRGCSG-VRRWVR 146 Query: 349 SPCPVVTSSTRRA 387 +T RRA Sbjct: 147 RHTATLTEQQRRA 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,384,106 Number of Sequences: 219361 Number of extensions: 2255448 Number of successful extensions: 5833 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5820 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
