ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11g21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475111.1| Oryza sativa (japonica cultivar-group), predic... 377 e-101
2dbj|AK062212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
3dbj|AB007120.1| Oryza sativa mRNA for ferrochelatase, partial cds 377 e-101
4dbj|AK073873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 8e-99
5gb|AY108152.1| Zea mays PCO129975 mRNA sequence 258 2e-65
6gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome... 230 5e-57
7gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome... 230 5e-57
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 230 5e-57
9emb|AJ316569.1|NTA316569 Nicotiana tabacum mRNA for ferrochelata... 80 1e-11
10gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rp... 76 2e-10
11emb|AJ005802.1|STU5802 Solanum tuberosum, cultivar binje, mRNA f... 74 7e-10
12gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete s... 72 3e-09
13gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete se... 72 3e-09
14gb|AC135605.25| Medicago truncatula clone mth2-7m1, complete seq... 64 6e-07
15gb|AC124964.17| Medicago truncatula clone mth2-27c4, complete se... 64 6e-07
16gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistanc... 64 6e-07
17gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg... 54 6e-04
18gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T... 48 0.037
19gb|AF332962.1| Chlamydomonas reinhardtii ferrochelatase mRNA, co... 48 0.037
20gb|AC007569.22| Homo sapiens 12 BAC RP11-689B22 (Roswell Park Ca... 44 0.58
21gb|AC145937.2| Pan troglodytes BAC clone RP43-10P16 from chromos... 44 0.58
22gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete ... 44 0.58
23gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, comp... 42 2.3
24gb|AC158987.3| Mus musculus BAC clone RP23-366K1 from chromosome... 42 2.3
25gb|BC058785.1| Mus musculus solute carrier family 17 (anion/suga... 42 2.3
26emb|CR722780.1|CNS0GKN6 Tetraodon nigroviridis full-length cDNA 42 2.3
27emb|CR688069.2|CNS0FTV5 Tetraodon nigroviridis full-length cDNA 42 2.3
28gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 42 2.3
29gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete s... 42 2.3
30gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete se... 42 2.3
31emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, co... 42 2.3
32gb|AC159883.2| Mus musculus BAC clone RP24-490A17 from chromosom... 42 2.3
33dbj|AK169868.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 2.3
34dbj|AK029102.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 42 2.3
35dbj|AK014522.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 42 2.3
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
37ref|NM_172773.1| Mus musculus solute carrier family 17 (anion/su... 42 2.3
38dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
39dbj|AK100643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
40emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c2... 42 2.3
41gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complet... 42 2.3
42gb|AC111093.10| Mus musculus chromosome 3, clone RP23-170E22, co... 40 9.1
43gb|AC165342.4| Mus musculus BAC clone RP23-472O23 from chromosom... 40 9.1
44gb|DQ175933.1| Hordeum vulgare subsp. vulgare clone 33-25A-LB fl... 40 9.1
45emb|Z83223.1|CEE01G4 Caenorhabditis elegans Cosmid E01G4, comple... 40 9.1
46gb|AY137516.1| Hordeum vulgare subsp. vulgare hypersensitive-ind... 40 9.1
47emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on ch... 40 9.1
48gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, comple... 40 9.1
49ref|NM_013503.1| Mus musculus dopamine receptor 5 (Drd5), mRNA 40 9.1
50emb|AL669868.16| Mouse DNA sequence from clone RP23-304H7 on chr... 40 9.1
51emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chr... 40 9.1
52gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, compl... 40 9.1
53gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Ho... 40 9.1
54gb|AC114483.2| Homo sapiens chromosome 1 clone RP4-600M23, compl... 40 9.1
55emb|BX601648.7| Zebrafish DNA sequence from clone DKEY-14F19 in ... 40 9.1
56ref|NM_182868.1| Danio rerio coagulation factor IX (f9), mRNA 40 9.1
57gb|AC098481.2| Homo sapiens chromosome 3 clone RP11-349E16, comp... 40 9.1
58dbj|AK045456.1| Mus musculus adult male corpora quadrigemina cDN... 40 9.1
59dbj|AK044390.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 9.1
60gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B1... 40 9.1
61gb|BC094987.1| Danio rerio coagulation factor IX, mRNA (cDNA clo... 40 9.1
62emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in ... 40 9.1
63gb|AF327184.1|AF327184S1 Mus musculus inducible costimulatory pr... 40 9.1
64gb|AC012611.6|AC012611 Homo sapiens chromosome 5 clone CTC-554K7... 40 9.1
65gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-24... 40 9.1
66dbj|AP005793.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.1
67gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 9.1
68gb|AF515270.1| Danio rerio coagulation factor IX mRNA, complete cds 40 9.1
69emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chrom... 40 9.1
70gb|M69118.1|RATD1BR Rattus norvegicus dopamine D1B receptor gene... 40 9.1 
>ref|XM_475111.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1581

 Score =  377 bits (190), Expect = e-101
 Identities = 301/338 (89%)
 Strand = Plus / Minus

                                                                        
Query: 325  ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
            |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 1568 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 1509

                                                                        
Query: 385  gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
            |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 1508 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 1449

                                                                        
Query: 445  cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
            |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 1448 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 1389

                                                                        
Query: 505  agctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgcc 564
            || || ||||| || |||||||||||||||| ||| ||||| |||||||| |||||||||
Sbjct: 1388 agttcttccacactcccaagtggcaccagtggctgtcgagcttcaaggtttgaaactgcc 1329

                                                                        
Query: 565  attgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtg 624
            || || ||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||
Sbjct: 1328 atagcaccaacataaggcaagctttcaataacagcatcggcaagatctgttatgaacgtg 1269

                                                  
Query: 625  ggctcacaacctaaagcaggaactcgtccccagtgctt 662
            || ||||||||||| |||||||||||||||||||||||
Sbjct: 1268 ggttcacaacctaatgcaggaactcgtccccagtgctt 1231
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>dbj|AK062212.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A06, full
           insert sequence
          Length = 580

 Score =  377 bits (190), Expect = e-101
 Identities = 301/338 (89%)
 Strand = Plus / Minus

                                                                       
Query: 325 ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
           |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 366 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 307

                                                                       
Query: 385 gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
           |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 306 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 247

                                                                       
Query: 445 cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
           |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 246 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 187

                                                                       
Query: 505 agctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgcc 564
           || || ||||| || |||||||||||||||| ||| ||||| |||||||| |||||||||
Sbjct: 186 agttcttccacactcccaagtggcaccagtggctgtcgagcttcaaggtttgaaactgcc 127

                                                                       
Query: 565 attgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtg 624
           || || ||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||
Sbjct: 126 atagcaccaacataaggcaagctttcaataacagcatcggcaagatctgttatgaacgtg 67

                                                 
Query: 625 ggctcacaacctaaagcaggaactcgtccccagtgctt 662
           || ||||||||||| |||||||||||||||||||||||
Sbjct: 66  ggttcacaacctaatgcaggaactcgtccccagtgctt 29
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>dbj|AB007120.1| Oryza sativa mRNA for ferrochelatase, partial cds
          Length = 1736

 Score =  377 bits (190), Expect = e-101
 Identities = 301/338 (89%)
 Strand = Plus / Minus

                                                                        
Query: 325  ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
            |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 1473 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 1414

                                                                        
Query: 385  gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
            |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 1413 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 1354

                                                                        
Query: 445  cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
            |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 1353 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 1294

                                                                        
Query: 505  agctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgcc 564
            || || ||||| || |||||||||||||||| ||| ||||| |||||||| |||||||||
Sbjct: 1293 agttcttccacactcccaagtggcaccagtggctgtcgagcttcaaggtttgaaactgcc 1234

                                                                        
Query: 565  attgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtg 624
            || || ||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||
Sbjct: 1233 atagcaccaacataaggcaagctttcaataacagcatcggcaagatctgttatgaacgtg 1174

                                                  
Query: 625  ggctcacaacctaaagcaggaactcgtccccagtgctt 662
            || ||||||||||| |||||||||||||||||||||||
Sbjct: 1173 ggttcacaacctaatgcaggaactcgtccccagtgctt 1136
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>dbj|AK073873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J07, full
            insert sequence
          Length = 2270

 Score =  369 bits (186), Expect = 8e-99
 Identities = 300/338 (88%)
 Strand = Plus / Minus

                                                                        
Query: 325  ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
            |||| ||| |||||||||||||||| ||| | ||| ||||| ||||||||||| ||||||
Sbjct: 1775 ggcaggatgccccactggtgcaagaacccttctcctgttgtcacctccagcactaggaga 1716

                                                                        
Query: 385  gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
            |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 1715 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 1656

                                                                        
Query: 445  cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
            |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 1655 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 1596

                                                                        
Query: 505  agctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgcc 564
            || || ||||| || |||||||||||||||| ||| ||||| |||||||| |||||||||
Sbjct: 1595 agttcttccacactcccaagtggcaccagtggctgtcgagcttcaaggtttgaaactgcc 1536

                                                                        
Query: 565  attgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtg 624
            || || ||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||
Sbjct: 1535 atagcaccaacataaggcaagctttcaataacagcatcggcaagatctgttatgaacgtg 1476

                                                  
Query: 625  ggctcacaacctaaagcaggaactcgtccccagtgctt 662
            || ||||||||||| |||||||||||||||||||||||
Sbjct: 1475 ggttcacaacctaatgcaggaactcgtccccagtgctt 1438
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>gb|AY108152.1| Zea mays PCO129975 mRNA sequence
          Length = 1119

 Score =  258 bits (130), Expect = 2e-65
 Identities = 202/226 (89%)
 Strand = Plus / Minus

                                                                       
Query: 437 tccagccccactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacg 496
           ||||||||||||||||||| || ||||| ||||| |||   ||||||||||||||||| |
Sbjct: 800 tccagccccactcccacacgattaccggtggagggagctcatcgcgcttcgagtcgtatg 741

                                                                       
Query: 497 ctgctagcagctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttgg 556
           |||||||||||||||||||||| || || || || || ||||||||||||||||| ||||
Sbjct: 740 ctgctagcagctcctccacgctcccgaggggtacgagagactgccgagcctcaagattgg 681

                                                                       
Query: 557 aaactgccattgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaa 616
           ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 680 aaactgccattgcgccaacataaggtaggctttcaataacagcatcagcaagatccgaaa 621

                                                         
Query: 617 tgaatgtgggctcacaacctaaagcaggaactcgtccccagtgctt 662
           |||||||||| || |||||||  || ||||| ||||||||||||||
Sbjct: 620 tgaatgtgggttcgcaacctagtgctggaacccgtccccagtgctt 575
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>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
             complete sequence
          Length = 164064

 Score =  230 bits (116), Expect = 5e-57
 Identities = 191/216 (88%)
 Strand = Plus / Minus

                                                                         
Query: 325   ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
             |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 15591 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 15532

                                                                         
Query: 385   gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
             |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 15531 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 15472

                                                                         
Query: 445   cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
             |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 15471 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 15412

                                                 
Query: 505   agctcctccacgcttccaagtggcaccagtgactgc 540
             || || ||||| || |||||||||||||||| ||||
Sbjct: 15411 agttcttccacactcccaagtggcaccagtggctgc 15376



 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Minus

                                                                         
Query: 541   cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
             ||||| |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 14870 cgagcttcaaggtttgaaactgccatagcaccaacataaggcaagctttcaataacagca 14811

                                                                         
Query: 601   tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtccccagtgc 660
             || ||||||||||  ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 14810 tcggcaagatctgttatgaacgtgggttcacaacctaatgcaggaactcgtccccagtgc 14751

               
Query: 661   tt 662
             ||
Sbjct: 14750 tt 14749
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>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
             complete sequence
          Length = 148373

 Score =  230 bits (116), Expect = 5e-57
 Identities = 191/216 (88%)
 Strand = Plus / Minus

                                                                         
Query: 325   ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
             |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 64823 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 64764

                                                                         
Query: 385   gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
             |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 64763 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 64704

                                                                         
Query: 445   cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
             |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 64703 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 64644

                                                 
Query: 505   agctcctccacgcttccaagtggcaccagtgactgc 540
             || || ||||| || |||||||||||||||| ||||
Sbjct: 64643 agttcttccacactcccaagtggcaccagtggctgc 64608



 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Minus

                                                                         
Query: 541   cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
             ||||| |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 64102 cgagcttcaaggtttgaaactgccatagcaccaacataaggcaagctttcaataacagca 64043

                                                                         
Query: 601   tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtccccagtgc 660
             || ||||||||||  ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 64042 tcggcaagatctgttatgaacgtgggttcacaacctaatgcaggaactcgtccccagtgc 63983

               
Query: 661   tt 662
             ||
Sbjct: 63982 tt 63981
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  230 bits (116), Expect = 5e-57
 Identities = 191/216 (88%)
 Strand = Plus / Minus

                                                                            
Query: 325      ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccaggaga 384
                |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||||| ||||||
Sbjct: 17071456 ggcaggatgccccactggtgcaagaacccttctccggttgtcacctccagcactaggaga 17071397

                                                                            
Query: 385      gccaacacggccagcatagcagcacgtccattccatgtctcggcactcttcgtccagccc 444
                |||| |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 17071396 gccagcacggccagcatagcagcccgtccattccaggtctccgcgctcttcgtccagccc 17071337

                                                                            
Query: 445      cactcccacacaatcaccggaggaggcagcatgtcgcgcttcgagtcgtacgctgctagc 504
                |||||||| ||| |||| ||||| ||||||  |||||| |||||||||||||| ||||||
Sbjct: 17071336 cactcccatacagtcactggagggggcagctcgtcgcgtttcgagtcgtacgccgctagc 17071277

                                                    
Query: 505      agctcctccacgcttccaagtggcaccagtgactgc 540
                || || ||||| || |||||||||||||||| ||||
Sbjct: 17071276 agttcttccacactcccaagtggcaccagtggctgc 17071241



 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Minus

                                                                            
Query: 541      cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
                ||||| |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 17070735 cgagcttcaaggtttgaaactgccatagcaccaacataaggcaagctttcaataacagca 17070676

                                                                            
Query: 601      tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtccccagtgc 660
                || ||||||||||  ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 17070675 tcggcaagatctgttatgaacgtgggttcacaacctaatgcaggaactcgtccccagtgc 17070616

                  
Query: 661      tt 662
                ||
Sbjct: 17070615 tt 17070614
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>emb|AJ316569.1|NTA316569 Nicotiana tabacum mRNA for ferrochelatase precursor (FeCh gene)
          Length = 2118

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                        
Query: 505  agctcctccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgcc 564
            ||||| |||||||| ||||| || |||| |||||| ||||| ||||| || || ||||||
Sbjct: 1372 agctcttccacgctgccaagaggaaccaatgactgacgagcttcaagatttgagactgcc 1313

                                                                        
Query: 565  attgcgccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtg 624
            ||||| |||||||| || || |||||||| || ||||| || | |||||| ||||| |||
Sbjct: 1312 attgctccaacatatggaagactttcaatcactgcatctgccaaatctgagatgaaagtg 1253

                                            
Query: 625  ggctcacaacctaaagcaggaactcgtcccca 656
            || |||  |||||  |||||||| ||| ||||
Sbjct: 1252 ggttcaacacctagggcaggaacacgtgccca 1221



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 325  ggcaagataccccactggtgcaagagcccctgtccggttgttacctccagcaccag 380
            ||||| |||||||||||||||| ||  || | ||| |||||||| || ||||||||
Sbjct: 1552 ggcaatataccccactggtgcaggaagccttctccagttgttacttctagcaccag 1497
to top
>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic
            sequence
          Length = 7321

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                          
Query: 3    aaacgcttgtagcaaatatgagcgttagttgcaacaaatttagacg 48
            ||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 5133 aaacgcttgtagcaaatatgaacgttggttgcaacaaatttagacg 5178



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                  
Query: 87   gccgaacggttcggccggcgcaccggccagaaacgttt 124
            |||||| |||||||||||||||||||||||||||||||
Sbjct: 5219 gccgaatggttcggccggcgcaccggccagaaacgttt 5256
to top
>emb|AJ005802.1|STU5802 Solanum tuberosum, cultivar binje, mRNA for ferrochelatase
          Length = 2051

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 112/137 (81%)
 Strand = Plus / Minus

                                                                        
Query: 511  tccacgcttccaagtggcaccagtgactgccgagcctcaaggttggaaactgccattgcg 570
            |||||||| ||||| || |||| |||||| ||||| ||||| || || ||||||||||| 
Sbjct: 1321 tccacgctgccaagagggaccaatgactggcgagcttcaagatttgagactgccattgct 1262

                                                                        
Query: 571  ccaacataaggcaggctttcaataacagcatccgcaagatctgaaatgaatgtgggctca 630
            || ||||| || || |||||||| || ||||| || | |||||||||||| ||||| |||
Sbjct: 1261 cctacatatggaagactttcaatcactgcatctgccaaatctgaaatgaaagtgggttca 1202

                             
Query: 631  caacctaaagcaggaac 647
              |||||  ||||||||
Sbjct: 1201 acacctagggcaggaac 1185
to top
>gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete sequence
          Length = 128831

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                          
Query: 541    cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
              ||||| |||||||| ||||||||||| || |||||||| || || || ||||| ||||||
Sbjct: 126033 cgagcttcaaggtttgaaactgccatcgcaccaacatatgggagactctcaattacagca 126092

                                                                      
Query: 601    tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtcccca 656
              || || |  ||||||||||| ||||| ||||| || | ||||||||| || |||||
Sbjct: 126093 tctgccaagtctgaaatgaaagtgggttcacatccaagagcaggaacacggcccca 126148



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 411    tccattccatgtctcggcactcttcgtccagccccactcccacac 455
              ||||||||| || || |||||||||||||| ||||| ||||||||
Sbjct: 125615 tccattccaagtttcagcactcttcgtccatccccattcccacac 125659
to top
>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence
          Length = 119876

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                         
Query: 541   cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
             ||||| |||||||| ||||||||||| || |||||||| || || || ||||| ||||||
Sbjct: 89098 cgagcttcaaggtttgaaactgccatcgcaccaacatatgggagactctcaattacagca 89039

                                                                     
Query: 601   tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtcccca 656
             || || |  ||||||||||| ||||| ||||| || | ||||||||| || |||||
Sbjct: 89038 tctgccaagtctgaaatgaaagtgggttcacatccaagagcaggaacacggcccca 88983



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 411   tccattccatgtctcggcactcttcgtccagccccactcccacac 455
             ||||||||| || || |||||||||||||| ||||| ||||||||
Sbjct: 89516 tccattccaagtttcagcactcttcgtccatccccattcccacac 89472
to top
>gb|AC135605.25| Medicago truncatula clone mth2-7m1, complete sequence
          Length = 121648

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                          
Query: 541    cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
              ||||| ||| |||| ||||| |||||||| |||||||| || || || ||||| ||||||
Sbjct: 107904 cgagcttcagggtttgaaacggccattgcaccaacatatgggagactctcaattacagca 107845

                                                                      
Query: 601    tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtcccca 656
              || || |  ||||||||||| ||||| ||||| || | ||||||||| || |||||
Sbjct: 107844 tctgccaagtctgaaatgaaagtgggttcacatccaagagcaggaacacggcccca 107789
to top
>gb|AC124964.17| Medicago truncatula clone mth2-27c4, complete sequence
          Length = 114519

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 541   cgagcctcaaggttggaaactgccattgcgccaacataaggcaggctttcaataacagca 600
             ||||| ||| |||| ||||| |||||||| |||||||| || || || ||||| ||||||
Sbjct: 11984 cgagcttcagggtttgaaacggccattgcaccaacatatgggagactctcaattacagca 12043

                                                                     
Query: 601   tccgcaagatctgaaatgaatgtgggctcacaacctaaagcaggaactcgtcccca 656
             || || |  ||||||||||| ||||| ||||| || | ||||||||| || |||||
Sbjct: 12044 tctgccaagtctgaaatgaaagtgggttcacatccaagagcaggaacacggcccca 12099
to top
>gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistance protein homolog (Big1)
            gene, complete cds
          Length = 7351

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 45/48 (93%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                            
Query: 1    aaaaacgcttgtagcaaatatgagcgttagttgcaacaaatttagacg 48
            ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 1272 aaaaacgcttgcagcaaatatga-cgctagttgcaacaaatttagacg 1226
to top
>gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic
           sequence
          Length = 3124

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 98  cggccggcgcaccggccagaaacgttt 124
           |||||||||||||||||||||||||||
Sbjct: 1   cggccggcgcaccggccagaaacgttt 27
to top
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
             genes, complete cds; and unknown gene
          Length = 43606

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 84    ccggccgaacggttcggccggcgcaccg 111
             ||||| ||||||||||||||||||||||
Sbjct: 29209 ccggcagaacggttcggccggcgcaccg 29182
to top
>gb|AF332962.1| Chlamydomonas reinhardtii ferrochelatase mRNA, complete cds
          Length = 2660

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 415  ttccatgtctcggcactcttcgtccagccccactcccaca 454
            ||||| ||||| || ||||| |||||||||||||||||||
Sbjct: 1544 ttccacgtctccgcgctcttggtccagccccactcccaca 1505
to top
>gb|AC007569.22| Homo sapiens 12 BAC RP11-689B22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 111074

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 227   gcatcaggacattcccaaatgaacca 252
             |||||||| |||||||||||||||||
Sbjct: 45154 gcatcagggcattcccaaatgaacca 45179
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>gb|AC145937.2| Pan troglodytes BAC clone RP43-10P16 from chromosome 7, complete sequence
          Length = 182785

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 289    atccatccatccatccccgctt 310
              ||||||||||||||||||||||
Sbjct: 153552 atccatccatccatccccgctt 153573
to top
>gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete sequence
          Length = 41777

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 138   ctctcttgagtctagcatattt 159
             ||||||||||||||||||||||
Sbjct: 41199 ctctcttgagtctagcatattt 41178
to top
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    ctgaaatccatccatccatcc 304
              |||||||||||||||||||||
Sbjct: 127759 ctgaaatccatccatccatcc 127779
to top
>gb|AC158987.3| Mus musculus BAC clone RP23-366K1 from chromosome 9, complete sequence
          Length = 222125

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 573    aacataaggcaggctttcaat 593
              |||||||||||||||||||||
Sbjct: 176248 aacataaggcaggctttcaat 176268
to top
>gb|BC058785.1| Mus musculus solute carrier family 17 (anion/sugar transporter),
            member 5, mRNA (cDNA clone MGC:67681 IMAGE:6309785),
            complete cds
          Length = 3152

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  aacataaggcaggctttcaat 593
            |||||||||||||||||||||
Sbjct: 2951 aacataaggcaggctttcaat 2931
to top
>emb|CR722780.1|CNS0GKN6 Tetraodon nigroviridis full-length cDNA
          Length = 993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 290 tccatccatccatccccgctt 310
           |||||||||||||||||||||
Sbjct: 211 tccatccatccatccccgctt 231
to top
>emb|CR688069.2|CNS0FTV5 Tetraodon nigroviridis full-length cDNA
          Length = 1363

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 290 tccatccatccatccccgctt 310
           |||||||||||||||||||||
Sbjct: 379 tccatccatccatccccgctt 399
to top
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 284    ctgaaatccatccatccatcc 304
              |||||||||||||||||||||
Sbjct: 145193 ctgaaatccatccatccatcc 145213
to top
>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence
          Length = 124666

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 9     ttgtagcaaatatgagcgttagttg 33
             |||||||||||||||| ||||||||
Sbjct: 77849 ttgtagcaaatatgagagttagttg 77825
to top
>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence
          Length = 120055

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 9     ttgtagcaaatatgagcgttagttg 33
             |||||||||||||||| ||||||||
Sbjct: 75189 ttgtagcaaatatgagagttagttg 75165
to top
>emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, complete sequence
          Length = 223724

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    ctgaaatccatccatccatcc 304
              |||||||||||||||||||||
Sbjct: 141651 ctgaaatccatccatccatcc 141631
to top
>gb|AC159883.2| Mus musculus BAC clone RP24-490A17 from chromosome 9, complete sequence
          Length = 140400

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 573    aacataaggcaggctttcaat 593
              |||||||||||||||||||||
Sbjct: 137641 aacataaggcaggctttcaat 137621
to top
>dbj|AK169868.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630001P18
            product:solute carrier family 17 (anion/sugar
            transporter), member 5, full insert sequence
          Length = 3195

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  aacataaggcaggctttcaat 593
            |||||||||||||||||||||
Sbjct: 3014 aacataaggcaggctttcaat 2994
to top
>dbj|AK029102.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732491M05 product:SIALIN homolog [Homo
            sapiens], full insert sequence
          Length = 3202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  aacataaggcaggctttcaat 593
            |||||||||||||||||||||
Sbjct: 3042 aacataaggcaggctttcaat 3022
to top
>dbj|AK014522.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4631416G20 product:unclassifiable, full
            insert sequence
          Length = 2674

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  aacataaggcaggctttcaat 593
            |||||||||||||||||||||
Sbjct: 2516 aacataaggcaggctttcaat 2496
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 288      aatccatccatccatccccgc 308
                |||||||||||||||||||||
Sbjct: 21329527 aatccatccatccatccccgc 21329547
to top
>ref|NM_172773.1| Mus musculus solute carrier family 17 (anion/sugar transporter),
            member 5 (Slc17a5), mRNA
          Length = 3202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 573  aacataaggcaggctttcaat 593
            |||||||||||||||||||||
Sbjct: 3042 aacataaggcaggctttcaat 3022
to top
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0038K02
          Length = 118635

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 288   aatccatccatccatccccgc 308
             |||||||||||||||||||||
Sbjct: 61906 aatccatccatccatccccgc 61926
to top
>dbj|AK100643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110J21, full
           insert sequence
          Length = 4052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 288 aatccatccatccatccccgc 308
           |||||||||||||||||||||
Sbjct: 52  aatccatccatccatccccgc 72
to top
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE
          Length = 210117

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 9     ttgtagcaaatatgagcgttagttg 33
             |||||||||||||||| ||||||||
Sbjct: 77853 ttgtagcaaatatgagagttagttg 77829
to top
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence
          Length = 236514

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 368    cctccagcaccaggagagccaacac 392
              |||||||| ||||||||||||||||
Sbjct: 193199 cctccagctccaggagagccaacac 193223
to top
>gb|AC111093.10| Mus musculus chromosome 3, clone RP23-170E22, complete sequence
          Length = 201202

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    atccatccatccatccccgc 308
              ||||||||||||||||||||
Sbjct: 167199 atccatccatccatccccgc 167218
to top
>gb|AC165342.4| Mus musculus BAC clone RP23-472O23 from chromosome 19, complete
             sequence
          Length = 187795

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 577   taaggcaggctttcaataacagca 600
             ||||||||| ||||||||||||||
Sbjct: 50815 taaggcaggttttcaataacagca 50792
to top
>gb|DQ175933.1| Hordeum vulgare subsp. vulgare clone 33-25A-LB flanking T-DNA
           insertion sequence
          Length = 292

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 1   aaaaacgcttgtagcaaatatgagcgttagttgcaacaaattta 44
           |||||||||||||| |||||| | || | ||| |||||||||||
Sbjct: 147 aaaaacgcttgtaggaaatataaacgctcgttacaacaaattta 104
to top
>emb|Z83223.1|CEE01G4 Caenorhabditis elegans Cosmid E01G4, complete sequence
          Length = 43442

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    tttgcgtggccggccgaacg 94
             ||||||||||||||||||||
Sbjct: 21060 tttgcgtggccggccgaacg 21079
to top
>gb|AY137516.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction
           protein 2 (hir2) gene, complete cds
          Length = 5125

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 42/48 (87%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                           
Query: 1   aaaaacgcttgtagcaaatatgagcgttagttgcaacaaatttagacg 48
           ||||| ||||| |||||| |||| || | |||||||||||||||||||
Sbjct: 397 aaaaatgcttgcagcaaaaatga-cgctggttgcaacaaatttagacg 443
to top
>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete
              sequence
          Length = 250586

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    tgaaatccatccatccatcc 304
              ||||||||||||||||||||
Sbjct: 140418 tgaaatccatccatccatcc 140399
to top
>gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, complete sequence
          Length = 189936

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   ctccagcaccaggagagccaacac 392
             |||||||||||||||| |||||||
Sbjct: 85658 ctccagcaccaggagacccaacac 85635
to top
>ref|NM_013503.1| Mus musculus dopamine receptor 5 (Drd5), mRNA
          Length = 2803

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 aggaggcagcatgtcgcgct 484
           ||||||||||||||||||||
Sbjct: 170 aggaggcagcatgtcgcgct 151
to top
>emb|AL669868.16| Mouse DNA sequence from clone RP23-304H7 on chromosome 11 Contains a
            COMM domain containing 9 (Commd9) pseudogene, a novel
            gene and the Tcf2 gene for transcription factor 2,
            complete sequence
          Length = 131266

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  tgaaatccatccatccatcc 304
            ||||||||||||||||||||
Sbjct: 9504 tgaaatccatccatccatcc 9523
to top
>emb|AL645744.16| Mouse DNA sequence from clone RP23-148E7 on chromosome 1 Contains the
             Icos gene for inducible T-cell co-stimulator, complete
             sequence
          Length = 108015

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tgaaatccatccatccatcc 304
             ||||||||||||||||||||
Sbjct: 14532 tgaaatccatccatccatcc 14551
to top
>gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, complete sequence
          Length = 184133

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ggacattcccaaatgaacca 252
             ||||||||||||||||||||
Sbjct: 79214 ggacattcccaaatgaacca 79195
to top
>gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216616

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   atccatccatccatccccgc 308
             ||||||||||||||||||||
Sbjct: 63063 atccatccatccatccccgc 63044
to top
>gb|AC114483.2| Homo sapiens chromosome 1 clone RP4-600M23, complete sequence
          Length = 108795

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 637   aaagcaggaactcgtcccca 656
             ||||||||||||||||||||
Sbjct: 62156 aaagcaggaactcgtcccca 62137
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>emb|BX601648.7| Zebrafish DNA sequence from clone DKEY-14F19 in linkage group 11,
              complete sequence
          Length = 230487

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    tgaaatccatccatccatcc 304
              ||||||||||||||||||||
Sbjct: 130855 tgaaatccatccatccatcc 130836
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>ref|NM_182868.1| Danio rerio coagulation factor IX (f9), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ccatactttcctttcttggc 196
            ||||||||||||||||||||
Sbjct: 1439 ccatactttcctttcttggc 1420
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>gb|AC098481.2| Homo sapiens chromosome 3 clone RP11-349E16, complete sequence
          Length = 227137

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ggacattcccaaatgaacca 252
              ||||||||||||||||||||
Sbjct: 202968 ggacattcccaaatgaacca 202949
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>dbj|AK045456.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230204D20
           product:dopamine receptor 5, full insert sequence
          Length = 2803

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 aggaggcagcatgtcgcgct 484
           ||||||||||||||||||||
Sbjct: 170 aggaggcagcatgtcgcgct 151
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>dbj|AK044390.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930010J23 product:unclassifiable, full insert
            sequence
          Length = 2623

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  aggaggcagcatgtcgcgct 484
            ||||||||||||||||||||
Sbjct: 1224 aggaggcagcatgtcgcgct 1243
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>gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B10, complete sequence
          Length = 235599

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcccaaatgaaccaaaatta 258
             ||||||||||||||||||||
Sbjct: 55266 tcccaaatgaaccaaaatta 55285
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>gb|BC094987.1| Danio rerio coagulation factor IX, mRNA (cDNA clone MGC:109775
           IMAGE:7250684), complete cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 ccatactttcctttcttggc 196
           ||||||||||||||||||||
Sbjct: 971 ccatactttcctttcttggc 952
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>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14,
             complete sequence
          Length = 166194

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   ccatactttcctttcttggc 196
             ||||||||||||||||||||
Sbjct: 61530 ccatactttcctttcttggc 61511
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>gb|AF327184.1|AF327184S1 Mus musculus inducible costimulatory protein (Icos) gene, exon 1
          Length = 2705

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tgaaatccatccatccatcc 304
           ||||||||||||||||||||
Sbjct: 955 tgaaatccatccatccatcc 974
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>gb|AC012611.6|AC012611 Homo sapiens chromosome 5 clone CTC-554K7, complete sequence
          Length = 115855

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tcccaaatgaaccaaaatta 258
             ||||||||||||||||||||
Sbjct: 11663 tcccaaatgaaccaaaatta 11682
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>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   attcagtccatactttcctttctt 193
             ||||||||||| ||||||||||||
Sbjct: 48981 attcagtccattctttcctttctt 48958
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>dbj|AP005793.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-2N10, complete
             sequence
          Length = 51000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   attcagtccatactttcctttctt 193
             ||||||||||| ||||||||||||
Sbjct: 23175 attcagtccattctttcctttctt 23198
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>gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone rp23-426e16, complete
              sequence
          Length = 194175

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    aggaggcagcatgtcgcgct 484
              ||||||||||||||||||||
Sbjct: 107203 aggaggcagcatgtcgcgct 107184
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>gb|AF515270.1| Danio rerio coagulation factor IX mRNA, complete cds
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  ccatactttcctttcttggc 196
            ||||||||||||||||||||
Sbjct: 1439 ccatactttcctttcttggc 1420
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>emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chromosome 1, complete sequence
          Length = 162143

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tgaaatccatccatccatcc 304
              ||||||||||||||||||||
Sbjct: 127564 tgaaatccatccatccatcc 127583
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>gb|M69118.1|RATD1BR Rattus norvegicus dopamine D1B receptor gene, complete cds
          Length = 2308

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 aggaggcagcatgtcgcgct 484
           ||||||||||||||||||||
Sbjct: 705 aggaggcagcatgtcgcgct 686


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,575,417
Number of Sequences: 3902068
Number of extensions: 5575417
Number of successful extensions: 329675
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 329318
Number of HSP's gapped (non-prelim): 358
length of query: 667
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 644
effective length of database: 17,143,297,704
effective search space: 11040283721376
effective search space used: 11040283721376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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