>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  188 bits (478), Expect = 1e-47
 Identities = 94/104 (90%), Positives = 96/104 (92%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGGLAY+LDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  I
Sbjct: 1513 AAGMTGGLAYILDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAI 1572

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 425
            L EWEAYLPLFWQLVPPSEEDSPEACAEFERVLA+Q T   SAK
Sbjct: 1573 LREWEAYLPLFWQLVPPSEEDSPEACAEFERVLAKQATTQLSAK 1616

>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  157 bits (398), Expect = 2e-38
 Identities = 77/103 (74%), Positives = 90/103 (87%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGGLAY+LDEDDTL+PKVNKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA I
Sbjct: 1416 AAGMTGGLAYILDEDDTLIPKVNKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASI 1475

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSA 428
            L +W+ YLPLFWQLVPPSEED+PEA A FE+ +  +  ++QSA
Sbjct: 1476 LKDWDKYLPLFWQLVPPSEEDTPEASAMFEQ-MTSEGASLQSA 1517

>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  154 bits (389), Expect = 3e-37
 Identities = 73/98 (74%), Positives = 86/98 (87%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGGLAY+LDEDDTL+PK+N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA I
Sbjct: 1547 AAGMTGGLAYLLDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATI 1606

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKT 443
            L+EWE YLPLFWQLVPPSEED+PEA A + R    + T
Sbjct: 1607 LNEWEKYLPLFWQLVPPSEEDTPEASAAYVRTSTGEVT 1644

>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  138 bits (348), Expect = 2e-32
 Identities = 64/85 (75%), Positives = 77/85 (90%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGGLAY+LDED+TL+PK+NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I
Sbjct: 1522 AAGMTGGLAYILDEDNTLLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMI 1581

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEA 482
            + EW+ YL +FWQLVPPSEED+PEA
Sbjct: 1582 VEEWDKYLAMFWQLVPPSEEDTPEA 1606

>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score =  105 bits (263), Expect = 1e-22
 Identities = 52/84 (61%), Positives = 60/84 (71%)
 Frame = -1

Query: 733  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 554
            AGMTGGLAY LDE   L  K+N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL
Sbjct: 1458 AGMTGGLAYFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAIL 1517

Query: 553  SEWEAYLPLFWQLVPPSEEDSPEA 482
            + W  YL  FWQ VPPSE+DSPEA
Sbjct: 1518 ANWSDYLGKFWQAVPPSEKDSPEA 1541

>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score =  101 bits (252), Expect = 2e-21
 Identities = 49/83 (59%), Positives = 58/83 (69%)
 Frame = -1

Query: 733  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 554
            AGMTGGLAY LDE++  + +VN EIVK+QRV   AG+ QLK LIE +  KTGS K   IL
Sbjct: 1443 AGMTGGLAYFLDEENKFIERVNSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNIL 1502

Query: 553  SEWEAYLPLFWQLVPPSEEDSPE 485
              W  YLP FWQ+VPPSE +  E
Sbjct: 1503 ENWNTYLPQFWQVVPPSEANIEE 1525

>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score = 90.1 bits (222), Expect = 6e-18
 Identities = 45/84 (53%), Positives = 57/84 (67%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGG+AY LDE   L  KVN +IV++QRV     + QL  LIE +V KTGS K   I
Sbjct: 1454 AAGMTGGIAYFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLI 1513

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPE 485
            L +WE ++  FWQ+VPPSE ++ E
Sbjct: 1514 LQQWEIFIHYFWQIVPPSESETSE 1537

>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score = 86.3 bits (212), Expect = 9e-17
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = -1

Query: 733  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKIL 554
            AGMTGG+AY LDED+TL  K+N EIVK QR+     + QLK ++E Y  KT S K   IL
Sbjct: 1443 AGMTGGIAYFLDEDNTLKNKLNTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLIL 1502

Query: 553  SEWEAYLPLFWQLVPPSEE 497
              W  YL  F+Q+VPPSE+
Sbjct: 1503 DNWSQYLAKFYQIVPPSEQ 1521

>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score = 69.7 bits (169), Expect = 9e-12
 Identities = 36/76 (47%), Positives = 49/76 (64%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGMTGG+AY+ D DD+L   +N E V  QR+     + QLK LIE +V +T S   A+I
Sbjct: 1420 AAGMTGGMAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEI 1479

Query: 556  LSEWEAYLPLFWQLVP 509
            L++W   +  FWQ+VP
Sbjct: 1480 LNDWAREVTKFWQVVP 1495

>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1550

 Score = 63.9 bits (154), Expect = 5e-10
 Identities = 34/102 (33%), Positives = 58/102 (56%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGM+GG+AY+ DE      + N  +V ++++  P     LK LI+ +V  T S KG  +
Sbjct: 1434 AAGMSGGVAYIFDETGDFATRCNSAMVGLEKLEDPEEIKDLKELIQNHVNYTDSAKGKAV 1493

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 431
            L++WEA +P F +++P           +++RVL   K A+++
Sbjct: 1494 LADWEASIPKFVKVMP----------RDYKRVLQAIKKALEA 1525

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -1

Query: 733  AGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKI 557
            AGMTGG AY+LDE      +VN E+V++  V+A A  +  L+GLI  +V+ TGS +G +I
Sbjct: 1418 AGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEI 1477

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQ 434
            L+ W  +   F  LV P   D         R  A  +   Q
Sbjct: 1478 LANWSTFATKF-ALVKPKSSDVKALLGHRSRSAAELRVQAQ 1517

>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC|
            1.4.1.14) (NADH-GOGAT)
          Length = 2194

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 34/102 (33%), Positives = 54/102 (52%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGM+GG+AY+LD D T   + N E+V + +V      + L+ LI+ +   T S    ++
Sbjct: 1533 AAGMSGGIAYVLDVDGTFQSRCNLELVDLDKVEEEEDIITLRMLIQQHQRHTNSLLAKEV 1592

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 431
            L ++E  LP F ++ P           E++RVLA  K+   S
Sbjct: 1593 LVDFENLLPKFVKVFP----------REYKRVLASMKSDAAS 1624

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 53.1 bits (126), Expect = 9e-07
 Identities = 34/104 (32%), Positives = 54/104 (51%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            AAGM+GG+AY+ D       K+N E+V +  V   A    L+GLI+ +   TGS    +I
Sbjct: 1476 AAGMSGGIAYVYDMQMDFAGKINTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRI 1535

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 425
            LS++  +L  F +++P           E++ VL R+    + AK
Sbjct: 1536 LSDFPRHLSRFVKVLP----------REYKAVLEREAAKKEEAK 1569

>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2144

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = -1

Query: 733  AGMTGGLAYMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 557
            +G TGG+AY L  D D  V K+NK+ V+++ +  P     +K LI+ +   T S   A+I
Sbjct: 1471 SGATGGIAYCLTSDYDDFVGKINKDTVELESLCDPVEIAFVKNLIQEHWNYTQSDLAARI 1530

Query: 556  LSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 425
            L  +  YL  F +++P           ++++VL ++K     AK
Sbjct: 1531 LGNFNHYLKDFVKVIP----------TDYKKVLLKEKAEAAKAK 1564

>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -1

Query: 736  AAGMTGGLAYMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAK 560
            AAGM+GG+AY+L ED      K N E++  + +       Q+K ++E +   T S K   
Sbjct: 1395 AAGMSGGIAYVLTEDVKRFKRKCNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAED 1454

Query: 559  ILSEWEAYLPLFWQLVP 509
            +L +WE  +  F +++P
Sbjct: 1455 LLDQWEDSVKKFVKVIP 1471

>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 531  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 409
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307

>POTE1_MOUSE (Q91WC1) Protection of telomeres 1 (mPot1) (POT1-like telomere|
           end-binding protein)
          Length = 640

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 IYRGGCLGCKTLQKNPRRNLQARFQKMPWT 277
           ++  GC  C +L+  P +NL +RF K PWT
Sbjct: 504 VHHYGCKQCSSLK--PIQNLNSRFHKGPWT 531

>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = -1

Query: 682 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 524
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 523 WQLVPPSEEDSP-EAC 479
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80

>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 491 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 658
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 659 NLLVNLWD 682
           ++ V LWD
Sbjct: 576 SIDVMLWD 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,600,167
Number of Sequences: 219361
Number of extensions: 2125620
Number of successful extensions: 5712
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5710
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7649585595
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)