>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  156 bits (394), Expect = 6e-38
 Identities = 78/87 (89%), Positives = 79/87 (90%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  IL EWEAYLPLFWQLVPP
Sbjct: 1530 LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAILREWEAYLPLFWQLVPP 1589

Query: 505  SEEDSPEACAEFERVLARQKTAVQSAK 425
            SEEDSPEACAEFERVLA+Q T   SAK
Sbjct: 1590 SEEDSPEACAEFERVLAKQATTQLSAK 1616

>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  125 bits (314), Expect = 1e-28
 Identities = 61/86 (70%), Positives = 73/86 (84%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            L+PKVNKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL +W+ YLPLFWQLVPP
Sbjct: 1433 LIPKVNKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASILKDWDKYLPLFWQLVPP 1492

Query: 505  SEEDSPEACAEFERVLARQKTAVQSA 428
            SEED+PEA A FE+ +  +  ++QSA
Sbjct: 1493 SEEDTPEASAMFEQ-MTSEGASLQSA 1517

>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  121 bits (304), Expect = 2e-27
 Identities = 57/81 (70%), Positives = 69/81 (85%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            L+PK+N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL+EWE YLPLFWQLVPP
Sbjct: 1564 LLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLPLFWQLVPP 1623

Query: 505  SEEDSPEACAEFERVLARQKT 443
            SEED+PEA A + R    + T
Sbjct: 1624 SEEDTPEASAAYVRTSTGEVT 1644

>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  108 bits (269), Expect = 2e-23
 Identities = 49/68 (72%), Positives = 60/68 (88%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            L+PK+NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+ EW+ YL +FWQLVPP
Sbjct: 1539 LLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKYLAMFWQLVPP 1598

Query: 505  SEEDSPEA 482
            SEED+PEA
Sbjct: 1599 SEEDTPEA 1606

>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 40/68 (58%), Positives = 48/68 (70%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            L  K+N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL+ W  YL  FWQ VPP
Sbjct: 1474 LPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPP 1533

Query: 505  SEEDSPEA 482
            SE+DSPEA
Sbjct: 1534 SEKDSPEA 1541

>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 37/66 (56%), Positives = 44/66 (66%)
 Frame = -1

Query: 682  VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPS 503
            + +VN EIVK+QRV   AG+ QLK LIE +  KTGS K   IL  W  YLP FWQ+VPPS
Sbjct: 1460 IERVNSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNILENWNTYLPQFWQVVPPS 1519

Query: 502  EEDSPE 485
            E +  E
Sbjct: 1520 EANIEE 1525

>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 33/67 (49%), Positives = 44/67 (65%)
 Frame = -1

Query: 685  LVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPP 506
            L  KVN +IV++QRV     + QL  LIE +V KTGS K   IL +WE ++  FWQ+VPP
Sbjct: 1471 LPEKVNLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLILQQWEIFIHYFWQIVPP 1530

Query: 505  SEEDSPE 485
            SE ++ E
Sbjct: 1531 SESETSE 1537

>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = -1

Query: 676  KVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 497
            K+N EIVK QR+     + QLK ++E Y  KT S K   IL  W  YL  F+Q+VPPSE+
Sbjct: 1462 KLNTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLILDNWSQYLAKFYQIVPPSEQ 1521

>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = -1

Query: 673  VNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 509
            +N E V  QR+     + QLK LIE +V +T S   A+IL++W   +  FWQ+VP
Sbjct: 1441 INDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWAREVTKFWQVVP 1495

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = -1

Query: 676  KVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSE 500
            +VN E+V++  V+A A  +  L+GLI  +V+ TGS +G +IL+ W  +   F  LV P  
Sbjct: 1437 RVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKF-ALVKPKS 1495

Query: 499  EDSPEACAEFERVLARQKTAVQ 434
             D         R  A  +   Q
Sbjct: 1496 SDVKALLGHRSRSAAELRVQAQ 1517

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 36.6 bits (83), Expect = 0.073
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = -1

Query: 676  KVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 497
            K+N E+V +  V   A    L+GLI+ +   TGS    +ILS++  +L  F +++P    
Sbjct: 1496 KINTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRILSDFPRHLSRFVKVLP---- 1551

Query: 496  DSPEACAEFERVLARQKTAVQSAK 425
                   E++ VL R+    + AK
Sbjct: 1552 ------REYKAVLEREAAKKEEAK 1569

>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 531  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 409
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307

>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -1

Query: 676  KVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 509
            K N E++  + +       Q+K ++E +   T S K   +L +WE  +  F +++P
Sbjct: 1416 KCNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDLLDQWEDSVKKFVKVIP 1471

>POTE1_MOUSE (Q91WC1) Protection of telomeres 1 (mPot1) (POT1-like telomere|
           end-binding protein)
          Length = 640

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 IYRGGCLGCKTLQKNPRRNLQARFQKMPWT 277
           ++  GC  C +L+  P +NL +RF K PWT
Sbjct: 504 VHHYGCKQCSSLK--PIQNLNSRFHKGPWT 531

>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 491 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 658
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 659 NLLVNLWD 682
           ++ V LWD
Sbjct: 576 SIDVMLWD 583

>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = -1

Query: 682 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 524
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 523 WQLVPPSEEDSP-EAC 479
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,271,677
Number of Sequences: 219361
Number of extensions: 1937925
Number of successful extensions: 5317
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5317
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)