ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
2dbj|AK100320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
3dbj|AK062213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
5emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 101 2e-18
6gb|AY112473.1| Zea mays CL234_1 mRNA sequence 72 2e-09
7gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, co... 42 1.9
8ref|XM_542713.2| PREDICTED: Canis familiaris similar to Golgi re... 42 1.9
9ref|XM_844821.1| PREDICTED: Canis familiaris similar to Golgi re... 42 1.9
10emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 ... 42 1.9
11gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, comp... 42 1.9
12ref|XM_690321.1| PREDICTED: Danio rerio similar to genetic suppr... 42 1.9
13ref|XM_688232.1| PREDICTED: Danio rerio similar to genetic suppr... 42 1.9
14emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in... 42 1.9
15dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, dele... 42 1.9
16ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA 40 7.4
17gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, co... 40 7.4
18gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 40 7.4
19emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in ... 40 7.4
20gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 7.4
21gb|AY033089.1| Enterococcus casseliflavus vancomycin resistance ... 40 7.4
22emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA s... 40 7.4
23gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, co... 40 7.4
24emb|X12542.1|SCRAD18A S.cerevisiae RAD18 gene 40 7.4
25emb|X12588.1|SCRAD18 Yeast RAD18 gene 40 7.4
26dbj|AK023817.1| Homo sapiens cDNA FLJ13755 fis, clone PLACE3000363 40 7.4
27dbj|AB225133.1| Aspergillus oryzae cDNA, contig sequence: AoEST1984 40 7.4
28gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, co... 40 7.4
29dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 7.4
30gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co... 40 7.4
31emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chro... 40 7.4
32gb|AY033764.1| Enterococcus flavescens vanC-3 vancomycin resista... 40 7.4
33gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, com... 40 7.4
34gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, com... 40 7.4
35gb|M36405.1|YSCRAD18A S.cerevisiae DNA repair protein (RAD18) ge... 40 7.4
36gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, com... 40 7.4
37emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, c... 40 7.4
38emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chro... 40 7.4
39gb|L08252.1|YSCHCM1PA Saccharomyces cerevisiae Hcm1p protein gen... 40 7.4
40dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clo... 40 7.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                            
Query: 99       tattcgctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatg 158
                ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||| 
Sbjct: 12366260 tattcgctttcatagtcgtcttcatctccgaacgagaagaccgaagcgtctgcagcaatt 12366319

                                       
Query: 159      gccttgaactcgctcaagctgga 181
                |||||||||||||||| ||||||
Sbjct: 12366320 gccttgaactcgctcatgctgga 12366342



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 405      ctgcccttggatgatccatcttctgcttcattgtcagaaaaaacatcatccttatcatca 464
                |||||||||||||||||||||||||||||| ||||||| || || |||||||||||||  
Sbjct: 12366572 ctgcccttggatgatccatcttctgcttcactgtcagagaagacgtcatccttatcattc 12366631

                                     
Query: 465      cttccagtttctttgttggac 485
                ||| ||| ||| |||||||||
Sbjct: 12366632 cttgcagattccttgttggac 12366652



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 202      gtgctttggtggagtcgctcttgctgctagcttcagttttgagag 246
                ||||| ||||||||  ||||||||||||| || || |||||||||
Sbjct: 12366369 gtgctgtggtggagctgctcttgctgctaactccacttttgagag 12366413
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>dbj|AK100320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079D17, full
            insert sequence
          Length = 2438

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                        
Query: 99   tattcgctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatg 158
            ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||| 
Sbjct: 2186 tattcgctttcatagtcgtcttcatctccgaacgagaagaccgaagcgtctgcagcaatt 2127

                                   
Query: 159  gccttgaactcgctcaagctgga 181
            |||||||||||||||| ||||||
Sbjct: 2126 gccttgaactcgctcatgctgga 2104



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 405  ctgcccttggatgatccatcttctgcttcattgtcagaaaaaacatcatccttatcatca 464
            |||||||||||||||||||||||||||||| ||||||| || || |||||||||||||  
Sbjct: 1874 ctgcccttggatgatccatcttctgcttcactgtcagagaagacgtcatccttatcattc 1815

                                 
Query: 465  cttccagtttctttgttggac 485
            ||| ||| ||| |||||||||
Sbjct: 1814 cttgcagattccttgttggac 1794



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 202  gtgctttggtggagtcgctcttgctgctagcttcagttttgagag 246
            ||||| ||||||||  ||||||||||||| || || |||||||||
Sbjct: 2077 gtgctgtggtggagctgctcttgctgctaactccacttttgagag 2033
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>dbj|AK062213.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A07, full
            insert sequence
          Length = 1356

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                        
Query: 99   tattcgctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatg 158
            ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||| 
Sbjct: 1101 tattcgctttcatagtcgtcttcatctccgaacgagaagaccgaagcgtctgcagcaatt 1042

                                   
Query: 159  gccttgaactcgctcaagctgga 181
            |||||||||||||||| ||||||
Sbjct: 1041 gccttgaactcgctcatgctgga 1019



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                       
Query: 405 ctgcccttggatgatccatcttctgcttcattgtcagaaaaaacatcatccttatcatca 464
           |||||||||||||||||||||||||||||| ||||||| || || |||||||||||||  
Sbjct: 789 ctgcccttggatgatccatcttctgcttcactgtcagagaagacgtcatccttatcattc 730

                                
Query: 465 cttccagtttctttgttggac 485
           ||| ||| ||| |||||||||
Sbjct: 729 cttgcagattccttgttggac 709



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 202 gtgctttggtggagtcgctcttgctgctagcttcagttttgagag 246
           ||||| ||||||||  ||||||||||||| || || |||||||||
Sbjct: 992 gtgctgtggtggagctgctcttgctgctaactccacttttgagag 948
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                            
Query: 99       tattcgctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatg 158
                ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||| 
Sbjct: 12320630 tattcgctttcatagtcgtcttcatctccgaacgagaagaccgaagcgtctgcagcaatt 12320689

                                       
Query: 159      gccttgaactcgctcaagctgga 181
                |||||||||||||||| ||||||
Sbjct: 12320690 gccttgaactcgctcatgctgga 12320712



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 405      ctgcccttggatgatccatcttctgcttcattgtcagaaaaaacatcatccttatcatca 464
                |||||||||||||||||||||||||||||| ||||||| || || |||||||||||||  
Sbjct: 12320942 ctgcccttggatgatccatcttctgcttcactgtcagagaagacgtcatccttatcattc 12321001

                                     
Query: 465      cttccagtttctttgttggac 485
                ||| ||| ||| |||||||||
Sbjct: 12321002 cttgcagattccttgttggac 12321022



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 202      gtgctttggtggagtcgctcttgctgctagcttcagttttgagag 246
                ||||| ||||||||  ||||||||||||| || || |||||||||
Sbjct: 12320739 gtgctgtggtggagctgctcttgctgctaactccacttttgagag 12320783
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                         
Query: 99    tattcgctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatg 158
             ||||||||||| ||||| ||||| ||||| || |||||||||||||||||||| ||||| 
Sbjct: 80625 tattcgctttcatagtcgtcttcatctccgaacgagaagaccgaagcgtctgcagcaatt 80684

                                    
Query: 159   gccttgaactcgctcaagctgga 181
             |||||||||||||||| ||||||
Sbjct: 80685 gccttgaactcgctcatgctgga 80707



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 405   ctgcccttggatgatccatcttctgcttcattgtcagaaaaaacatcatccttatcatca 464
             |||||||||||||||||||||||||||||| ||||||| || || |||||||||||||  
Sbjct: 80937 ctgcccttggatgatccatcttctgcttcactgtcagagaagacgtcatccttatcattc 80996

                                  
Query: 465   cttccagtttctttgttggac 485
             ||| ||| ||| |||||||||
Sbjct: 80997 cttgcagattccttgttggac 81017



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 202   gtgctttggtggagtcgctcttgctgctagcttcagttttgagag 246
             ||||| ||||||||  ||||||||||||| || || |||||||||
Sbjct: 80734 gtgctgtggtggagctgctcttgctgctaactccacttttgagag 80778
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>gb|AY112473.1| Zea mays CL234_1 mRNA sequence
          Length = 1656

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 131/162 (80%), Gaps = 3/162 (1%)
 Strand = Plus / Minus

                                                                        
Query: 105  ctttcgtagtcatcttcgtctccaaatgagaagaccgaagcgtctgcggcaatggccttg 164
            ||||| || |||||||| ||||| || ||||| ||||| || ||||||||||| ||||||
Sbjct: 1401 ctttcataatcatcttcatctccgaacgagaacaccgaggcatctgcggcaatcgccttg 1342

                                                                        
Query: 165  aactcgctcaagctggatgattccatagc---aggaggctgtgctttggtggagtcgctc 221
            || ||||||| |||||| || ||   |||   ||||||  ||||| ||||||||  |  |
Sbjct: 1341 aattcgctcatgctggaagagtcagcagctggaggaggtggtgctgtggtggagctggcc 1282

                                                      
Query: 222  ttgctgctagcttcagttttgagagagataccgtcaggtgcc 263
            ||||||||  ||||||||||||||||  |||| |||||||||
Sbjct: 1281 ttgctgctgacttcagttttgagagatgtaccatcaggtgcc 1240



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 465  cttccagtttctttgttggactctgcaggtgcagca 500
            ||||||||| | |||||||| ||| |||||||||||
Sbjct: 1032 cttccagttcccttgttggattcttcaggtgcagca 997
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>gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, complete sequence
          Length = 176600

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 502    tgctgtccttggcattgctgc 522
              |||||||||||||||||||||
Sbjct: 109058 tgctgtccttggcattgctgc 109078
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>ref|XM_542713.2| PREDICTED: Canis familiaris similar to Golgi reassembly stacking
            protein 1, transcript variant 1 (LOC485594), mRNA
          Length = 2956

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 380  accactgctggagacgtcctc 400
            |||||||||||||||||||||
Sbjct: 1065 accactgctggagacgtcctc 1045
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>ref|XM_844821.1| PREDICTED: Canis familiaris similar to Golgi reassembly stacking
            protein 1, transcript variant 2 (LOC485594), mRNA
          Length = 3152

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 380  accactgctggagacgtcctc 400
            |||||||||||||||||||||
Sbjct: 1065 accactgctggagacgtcctc 1045
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>emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 in linkage group 11,
              complete sequence
          Length = 179522

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    cgctcaagctggatgattcca 189
              |||||||||||||||||||||
Sbjct: 172680 cgctcaagctggatgattcca 172700
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>gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, complete sequence
          Length = 177410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 403    tcctgcccttggatgatccatcttctgct 431
              ||||||||||||||| |||||||||||||
Sbjct: 146250 tcctgcccttggatg-tccatcttctgct 146223
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>ref|XM_690321.1| PREDICTED: Danio rerio similar to genetic suppressor element 1
            (LOC567033), mRNA
          Length = 5017

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 169  cgctcaagctggatgattcca 189
            |||||||||||||||||||||
Sbjct: 2702 cgctcaagctggatgattcca 2722
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>ref|XM_688232.1| PREDICTED: Danio rerio similar to genetic suppressor element 1
            (LOC564914), mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 169  cgctcaagctggatgattcca 189
            |||||||||||||||||||||
Sbjct: 2185 cgctcaagctggatgattcca 2205
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>emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in linkage group 18,
             complete sequence
          Length = 151449

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   cgctcaagctggatgattcca 189
             |||||||||||||||||||||
Sbjct: 94096 cgctcaagctggatgattcca 94116
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>dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, deleted region in human
             lung cancer, complete sequence
          Length = 146736

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 403   tcctgcccttggatgatccatcttctgct 431
             ||||||||||||||| |||||||||||||
Sbjct: 46796 tcctgcccttggatg-tccatcttctgct 46823
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>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA
          Length = 12715

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 484  actctgcaggtgcagcattg 503
            ||||||||||||||||||||
Sbjct: 5327 actctgcaggtgcagcattg 5308
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>gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, complete sequence
          Length = 167971

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   gtcctccttcctgcccttgg 414
             ||||||||||||||||||||
Sbjct: 64945 gtcctccttcctgcccttgg 64964
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>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    tggatgatccatcttctgct 431
              ||||||||||||||||||||
Sbjct: 165402 tggatgatccatcttctgct 165421
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>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7,
             complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   tgttgtgcaacacttgtttc 349
             ||||||||||||||||||||
Sbjct: 94604 tgttgtgcaacacttgtttc 94585
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 74      aaacacctgcaaaagcaaag 93
               ||||||||||||||||||||
Sbjct: 1476398 aaacacctgcaaaagcaaag 1476417
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>gb|AY033089.1| Enterococcus casseliflavus vancomycin resistance gene cluster,
            partial sequence
          Length = 4611

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  ctttggctctatttgctcca 374
            ||||||||||||||||||||
Sbjct: 1419 ctttggctctatttgctcca 1438
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>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence
          Length = 316613

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    aaaaacatcatccttatcat 462
              ||||||||||||||||||||
Sbjct: 230938 aaaaacatcatccttatcat 230957
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>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence
          Length = 155807

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 484  actctgcaggtgcagcattg 503
            ||||||||||||||||||||
Sbjct: 2654 actctgcaggtgcagcattg 2635
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>emb|X12542.1|SCRAD18A S.cerevisiae RAD18 gene
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 aaaaacatcatccttatcat 462
           ||||||||||||||||||||
Sbjct: 108 aaaaacatcatccttatcat 127
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>emb|X12588.1|SCRAD18 Yeast RAD18 gene
          Length = 2471

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 aaaaacatcatccttatcat 462
           ||||||||||||||||||||
Sbjct: 107 aaaaacatcatccttatcat 126
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>dbj|AK023817.1| Homo sapiens cDNA FLJ13755 fis, clone PLACE3000363
          Length = 4348

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 484  actctgcaggtgcagcattg 503
            ||||||||||||||||||||
Sbjct: 2006 actctgcaggtgcagcattg 1987
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>dbj|AB225133.1| Aspergillus oryzae cDNA, contig sequence: AoEST1984
          Length = 936

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 483 gactctgcaggtgcagcatt 502
           ||||||||||||||||||||
Sbjct: 378 gactctgcaggtgcagcatt 359
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>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   actctgcaggtgcagcattg 503
             ||||||||||||||||||||
Sbjct: 53874 actctgcaggtgcagcattg 53893
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    gactctgcaggtgcagcatt 502
              ||||||||||||||||||||
Sbjct: 819763 gactctgcaggtgcagcatt 819744
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>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaatcaaacacctgcaaaag 88
              ||||||||||||||||||||
Sbjct: 120947 aaatcaaacacctgcaaaag 120928
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>emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chromosome 2, complete
             sequence
          Length = 56898

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 420   ccatcttctgcttcattgtcagaaaaaa 447
             |||||||| | |||||||||||||||||
Sbjct: 28212 ccatcttcagattcattgtcagaaaaaa 28239
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>gb|AY033764.1| Enterococcus flavescens vanC-3 vancomycin resistance gene cluster,
            complete sequence
          Length = 5662

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  ctttggctctatttgctcca 374
            ||||||||||||||||||||
Sbjct: 2475 ctttggctctatttgctcca 2494
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>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence
          Length = 190274

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  acgtcctccttcctgccctt 412
            ||||||||||||||||||||
Sbjct: 5148 acgtcctccttcctgccctt 5129
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>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence
          Length = 161953

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    acgtcctccttcctgccctt 412
              ||||||||||||||||||||
Sbjct: 101372 acgtcctccttcctgccctt 101353
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>gb|M36405.1|YSCRAD18A S.cerevisiae DNA repair protein (RAD18) gene, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 aaaaacatcatccttatcat 462
           ||||||||||||||||||||
Sbjct: 108 aaaaacatcatccttatcat 127
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>gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, complete sequence
          Length = 204569

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    gtcctccttcctgcccttgg 414
              ||||||||||||||||||||
Sbjct: 198569 gtcctccttcctgcccttgg 198588
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>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence
          Length = 163121

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    tgttgtgcaacacttgtttc 349
              ||||||||||||||||||||
Sbjct: 105782 tgttgtgcaacacttgtttc 105763
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>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete
             sequence
          Length = 171424

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   gtttctttgttggactctgc 490
             ||||||||||||||||||||
Sbjct: 26969 gtttctttgttggactctgc 26950
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>gb|L08252.1|YSCHCM1PA Saccharomyces cerevisiae Hcm1p protein gene, complete cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 443  aaaaacatcatccttatcat 462
            ||||||||||||||||||||
Sbjct: 1752 aaaaacatcatccttatcat 1771
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>dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clone:91h23 to 9-41
          Length = 178348

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    acgtcctccttcctgccctt 412
              ||||||||||||||||||||
Sbjct: 131833 acgtcctccttcctgccctt 131814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,360,415
Number of Sequences: 3902068
Number of extensions: 5360415
Number of successful extensions: 105463
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 105312
Number of HSP's gapped (non-prelim): 153
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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