ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11g02 |
|---|---|
| Clone Library Name | barley_pub |
>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol| oxygenase) Length = 308 Score = 246 bits (627), Expect = 5e-65 Identities = 112/123 (91%), Positives = 116/123 (94%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 ENPDY NP+ NTKFG YSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF Sbjct: 186 ENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 245 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YPLHKHGAY HLMN+EDKENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIEKYFP K Sbjct: 246 YPLHKHGAYMHLMNDEDKENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAK 305 Query: 237 LKW 229 L+W Sbjct: 306 LRW 308
>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol| oxygenase 5) (AtMIOX5) Length = 314 Score = 236 bits (603), Expect = 3e-62 Identities = 105/123 (85%), Positives = 116/123 (94%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 ENPD++NP++NTK G+YSEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFIIRYHSF Sbjct: 192 ENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSF 251 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YPLHK GAYTHLMNEEDKENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+KYFPE Sbjct: 252 YPLHKAGAYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPEN 311 Query: 237 LKW 229 L+W Sbjct: 312 LRW 314
>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol| oxygenase 4) (AtMIOX4) Length = 317 Score = 231 bits (589), Expect = 1e-60 Identities = 103/123 (83%), Positives = 112/123 (91%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 ENPD+HN +NTK G+YSEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FIIRYHSF Sbjct: 195 ENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSF 254 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YPLH G YTHLMNEEDKENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+KYFPE Sbjct: 255 YPLHTAGEYTHLMNEEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPEN 314 Query: 237 LKW 229 L+W Sbjct: 315 LRW 317
>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol| oxygenase 1) (AtMIOX1) Length = 311 Score = 225 bits (573), Expect = 9e-59 Identities = 99/123 (80%), Positives = 111/123 (90%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 ENPDY NP +N+K+G+Y+EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFIIRYHSF Sbjct: 189 ENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSF 248 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 Y LHK AY HLMN ED+EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL KYFP K Sbjct: 249 YALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSK 308 Query: 237 LKW 229 LKW Sbjct: 309 LKW 311
>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol| oxygenase 2) (AtMIOX2) Length = 317 Score = 223 bits (568), Expect = 3e-58 Identities = 100/122 (81%), Positives = 112/122 (91%) Frame = -1 Query: 594 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 415 N D +NP++NTK GVY+EGCGLDNVLMSWGHDDYMYLVAK+N TTLP AGLFIIRYHSFY Sbjct: 196 NHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFY 255 Query: 414 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 235 PLHK GAYTHLMN+ED+++LKWLHVFNKYDLYSKS V +DVE+VKPYY+SLI KYFP KL Sbjct: 256 PLHKAGAYTHLMNDEDRDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKL 315 Query: 234 KW 229 KW Sbjct: 316 KW 317
>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 278 Score = 164 bits (416), Expect = 1e-40 Identities = 72/122 (59%), Positives = 92/122 (75%) Frame = -1 Query: 594 NPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFY 415 NPD NP NT+FG+Y CGLD VLMSWGHD+Y+Y V K NK T+P GL++IR+HSFY Sbjct: 157 NPDGKNPAPNTEFGIYEPQCGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFY 216 Query: 414 PLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKL 235 P H +G Y HL NE+D++ L W+ FNK+DLY+KS+ DVE++KPYY SLI+KY P L Sbjct: 217 PWHSNGDYMHLCNEKDQQMLPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVL 276 Query: 234 KW 229 +W Sbjct: 277 QW 278
>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) Length = 282 Score = 145 bits (365), Expect = 1e-34 Identities = 63/123 (51%), Positives = 84/123 (68%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 +NPD +P ++T+ G+Y CGL+N LMSWGHD+YMY + K NK +LP +IIR+HSF Sbjct: 160 DNPDLQDPVYSTELGMYQPHCGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSF 219 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YP H G Y L NE+D L W+ FNK+DLY+K S DV++++PYY LI+KY P Sbjct: 220 YPWHTGGDYRQLCNEQDLAMLPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGV 279 Query: 237 LKW 229 L W Sbjct: 280 LCW 282
>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) Length = 285 Score = 144 bits (363), Expect = 2e-34 Identities = 61/123 (49%), Positives = 85/123 (69%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 +NPD +P ++T+ G+Y CGL+NVLMSWGHD+Y+Y + K NK +LPS ++IR+HSF Sbjct: 163 DNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSF 222 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YP H G Y L +++D + L W+ FNK+DLY+K DVE ++PYY LI+KY P Sbjct: 223 YPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGT 282 Query: 237 LKW 229 L W Sbjct: 283 LSW 285
>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 285 Score = 140 bits (353), Expect = 3e-33 Identities = 61/123 (49%), Positives = 82/123 (66%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 +NPD +P ++T+ G+Y CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSF Sbjct: 163 DNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSF 222 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YP H Y L +++D L W+ FNK+DLY+K DV+K++PYY LI+KY P Sbjct: 223 YPWHTGSDYQQLCSQQDLAMLPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGI 282 Query: 237 LKW 229 L W Sbjct: 283 LSW 285
>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 140 bits (352), Expect = 4e-33 Identities = 58/123 (47%), Positives = 85/123 (69%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 +NPD +P ++T+ G+Y CGL+NVLMSWGHD+Y+Y + K NK +LPS +++R+HSF Sbjct: 163 DNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSF 222 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YP H G Y L +++D + L W+ FNK+DLY+K +V+ ++PYY LI+KY P Sbjct: 223 YPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGI 282 Query: 237 LKW 229 L W Sbjct: 283 LSW 285
>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 139 bits (351), Expect = 5e-33 Identities = 61/123 (49%), Positives = 82/123 (66%) Frame = -1 Query: 597 ENPDYHNPEFNTKFGVYSEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSF 418 +NPD +P ++T+ G+Y CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSF Sbjct: 163 DNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSF 222 Query: 417 YPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 YP H Y L +++D L W+ FNK+DLY+K DV+K++PYY LI+KY P Sbjct: 223 YPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGI 282 Query: 237 LKW 229 L W Sbjct: 283 LSW 285
>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 908 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = -1 Query: 432 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 253 R FY L K Y + K +H+ KYDL SK+ ID+ ++ + EK Sbjct: 12 RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65 Query: 252 YFPE 241 Y P+ Sbjct: 66 YMPK 69
>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)| Length = 450 Score = 32.3 bits (72), Expect = 1.1 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -1 Query: 534 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 364 G+ LM W H + +E L P GLF++R + YP G YT ++ E K Sbjct: 74 GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125 Query: 363 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 250 V + +YS S + ID E M L+E Y Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156
>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 776 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -1 Query: 537 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 358 C ++NV+M D + +A ENK L A II + FY + Y +++ED+E+ Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438 Query: 357 LKWL 346 K L Sbjct: 439 NKML 442
>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)| Length = 172 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -1 Query: 393 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 274 Y L+N +KE L +HV K+D + +V R++ E V+ Y Sbjct: 88 YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128
>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference| protein 2) (Ras inhibitor JC265) (Ras association domain family 4) Length = 895 Score = 30.0 bits (66), Expect = 5.3 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = -1 Query: 366 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 238 KENL+ + N +L ++ + +DVEK+K +M++ + Y PEK Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669
>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja| UDPGD intein] Length = 895 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/86 (24%), Positives = 41/86 (47%) Frame = -1 Query: 504 HDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYD 325 + Y+Y V EN + S G+ I H+ +P L+ + + N++ + + D Sbjct: 690 YSGYVYSVETENSLLITSYGILI---HNCFPKDVKA----LIKQFENNNIEPI-LIKATD 741 Query: 324 LYSKSSVRIDVEKVKPYYMSLIEKYF 247 + ++ ++ EK+K YY +L K F Sbjct: 742 IVNEEQIKWFFEKIKNYYGNLNGKTF 767 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,149,012 Number of Sequences: 219361 Number of extensions: 1660252 Number of successful extensions: 4462 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4327 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4462 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
