ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11f15 |
|---|---|
| Clone Library Name | barley_pub |
>UBC6_CANGA (Q6FQK7) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 246 Score = 104 bits (260), Expect = 2e-22 Identities = 57/132 (43%), Positives = 79/132 (59%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLSMSD+HP++WNP WSVA+IL GLLSFM D TTGSI +T EKK LAK S+ YN Sbjct: 85 RLCLSMSDYHPDTWNPGWSVATILNGLLSFMTGDESTTGSITTTQQEKKILAKKSMYYN- 143 Query: 471 ESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRP 292 + N F+ +FPE VEK + ++ + + + P ++ A V +I P Sbjct: 144 -TFNSTRFKLVFPEIVEKNITELQRRKQEEKDMSMFEKKEDPLVKAAREKAIEVKDIVNP 202 Query: 291 VAEVRGEKKLKK 256 +R E+ LK+ Sbjct: 203 EDRIRAEQALKE 214
>UB2J2_MOUSE (Q6P073) Ubiquitin-conjugating enzyme E2 J2 (EC 6.3.2.19)| (Non-canonical ubiquitin-conjugating enzyme 2) (NCUBE2) Length = 259 Score = 99.8 bits (247), Expect = 7e-21 Identities = 52/104 (50%), Positives = 69/104 (66%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLS++DFHP++WNP WSV++ILTGLLSFM++ T GSI ++D KK+LA SL +N Sbjct: 92 RLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKKQLAAQSLVFNL 151 Query: 471 ESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 + K F +LFPE VE+ Q+Q K Q PQ P P P Sbjct: 152 KDK---VFCELFPEVVEEIKQKQ-KAQDELSNRPQNLPLPDVVP 191
>UB2J2_HUMAN (Q8N2K1) Ubiquitin-conjugating enzyme E2 J2 (EC 6.3.2.19)| (Non-canonical ubiquitin-conjugating enzyme 2) (NCUBE2) Length = 259 Score = 99.8 bits (247), Expect = 7e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLS++DFHP++WNP WSV++ILTGLLSFM++ T GSI ++D K++LA SLA+N Sbjct: 92 RLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNL 151 Query: 471 ESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 + K F +LFPE VE+ Q+Q K Q PQ P P P Sbjct: 152 KDK---VFCELFPEVVEEIKQKQ-KAQDELSSRPQTLPLPDVVP 191
>UBC6_YEAST (P33296) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 250 Score = 96.7 bits (239), Expect = 6e-20 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 8/143 (5%) Frame = -1 Query: 660 PHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLA 481 P+ R+CLSMSD+HP++WNP WSV++IL GLLSFM D TTGSI ++D +KK LA+ S++ Sbjct: 82 PNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDEATTGSITTSDHQKKTLARNSIS 141 Query: 480 YNCESKNCPHFRKLFPEYVEKYNQQQEKEQ--------TGAEPEPQEKPAPSPSPADVQQ 325 YN F+ +FPE V++ + EK + TG E E P ++ Sbjct: 142 YNTFQN--VRFKLIFPEVVQENVETLEKRKLDEGDAANTGDETE-------DPFTKAAKE 192 Query: 324 AAAMVNNIGRPVAEVRGEKKLKK 256 + I P +R E+ L++ Sbjct: 193 KVISLEEILDPEDRIRAEQALRQ 215
>UBC6_DEBHA (Q6BYG4) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 242 Score = 91.7 bits (226), Expect = 2e-18 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 4/108 (3%) Frame = -1 Query: 663 APHKRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASL 484 A + R+CLSMSD+HP++WNP WSVA+ILTGLLSFM D TTGSI ++D KKRLA++S Sbjct: 81 ACNTRLCLSMSDYHPDTWNPAWSVATILTGLLSFMTGDESTTGSITTSDNVKKRLARSSK 140 Query: 483 AYNCESKNCPHFRKLFPEYVEKYN----QQQEKEQTGAEPEPQEKPAP 352 +N + F K FP+ V + + +EQ A + + P Sbjct: 141 EWN--NAENQRFTKQFPDLVAQNKVDVAARNAREQAAATTDSTDPEKP 186
>UBC6_KLULA (Q6CMG6) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 251 Score = 89.7 bits (221), Expect = 7e-18 Identities = 49/131 (37%), Positives = 74/131 (56%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLSMSD+HPE+WNP WSV +IL GLLSFM D TTGS+ ++D +K+ LAK S +N Sbjct: 85 RLCLSMSDYHPEAWNPAWSVVTILNGLLSFMTGDEQTTGSVSTSDKDKRTLAKKSKHFNT 144 Query: 471 ESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRP 292 S F+ +FP+ E + E+E + + + + A +++I P Sbjct: 145 YSNF--KFKNMFPDLRESNIKDIEREAALEAESKGAQQEENKAQKLATEKATSLDDISDP 202 Query: 291 VAEVRGEKKLK 259 VR ++ +K Sbjct: 203 EDRVRIQELIK 213
>UBC6_ASHGO (Q74Z34) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC6) (Ubiquitin carrier protein UBC6) Length = 242 Score = 87.4 bits (215), Expect = 3e-17 Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 5/98 (5%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLSMSD+HP++WNP WSVA+ILTGLLSFM D + G++ STD K++ A S +N Sbjct: 85 RLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDESSIGTMESTDSTKRKYAAKSKEHN- 143 Query: 471 ESKNCPHFRKLFPEYVEKYNQ-----QQEKEQTGAEPE 373 + P F ++FPE E+ + ++ K++T E E Sbjct: 144 -ATRSPIFCQIFPELAEQNRRDIEEAKKRKDETVVEDE 180
>UBC6_SCHPO (O42646) Ubiquitin-conjugating enzyme E2 6 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc6) (Ubiquitin carrier protein ubc6) Length = 227 Score = 81.3 bits (199), Expect = 2e-15 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Frame = -1 Query: 651 RICLSMSDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNC 472 R+CLS SDFHP+SWNP W V++IL GL+SFM D +TTG I +++ ++ AK + +N Sbjct: 85 RLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEITTGGIVTSESTRRTYAKDTKRFNI 144 Query: 471 ESKNCPHFRKLFPEYVEKYNQQQEKEQT-GAEPEPQE 364 P F +FPE ++K + K A EPQ+ Sbjct: 145 MDN--PKFLIMFPELIDKNREDIAKAAAEAALIEPQQ 179
>UB2J1_MOUSE (Q9JJZ4) Ubiquitin-conjugating enzyme E2 J1 (EC 6.3.2.19)| (Non-canonical ubiquitin-conjugating enzyme 1) (NCUBE1) Length = 318 Score = 53.9 bits (128), Expect = 4e-07 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = -1 Query: 654 KRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL-TTGSIRSTDGEKKRLAKASLAY 478 K+ICLS+S HPE+W P WS+ + L ++ FM GS+ T E++ LAK S + Sbjct: 88 KKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDF 147 Query: 477 NCE 469 CE Sbjct: 148 CCE 150
>UB2J1_HUMAN (Q9Y385) Ubiquitin-conjugating enzyme E2 J1 (EC 6.3.2.19)| (Non-canonical ubiquitin-conjugating enzyme 1) (NCUBE1) (Yeast ubiquitin-conjugating enzyme UBC6 homolog E) (HSUBC6e) Length = 318 Score = 53.9 bits (128), Expect = 4e-07 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = -1 Query: 654 KRICLSMSDFHPESWNPMWSVASILTGLLSFMMDDAL-TTGSIRSTDGEKKRLAKASLAY 478 K+ICLS+S HPE+W P WS+ + L ++ FM GS+ T E++ LAK S + Sbjct: 88 KKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDF 147 Query: 477 NCE 469 CE Sbjct: 148 CCE 150
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 33.5 bits (75), Expect = 0.58 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQE-----KPAPSPSPADVQQAAAMVNNIGR 295 ++ QQQ+++Q +P PQ+ +PAPS PA QQ N R Sbjct: 843 QQQQQQQQQQQQQQQPPPQQSQTQQQPAPSQQPAPAQQQPQQFRNDNR 890
>PDE4A_MOUSE (O89084) cAMP-dependent 3',5'-cyclic phosphodiesterase 4A (EC| 3.1.4.17) Length = 844 Score = 33.1 bits (74), Expect = 0.76 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = -1 Query: 432 EYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKKL 262 EY+ ++ E P P+++P P PA VQQA +P++++ G KKL Sbjct: 280 EYISNTFLDKQHEVEIPSPTPRQRPFQQPPPAAVQQA--------QPMSQITGLKKL 328
>GAGHB_DROME (Q967S7) Retrovirus-related Gag polyprotein from transposon| HMS-Beagle Length = 467 Score = 33.1 bits (74), Expect = 0.76 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = -1 Query: 420 KYNQQQEKEQTGAEPEP-QEKPAPSPSPADVQQAAAM--VNNIGRPVAEVRGEKK 265 + N QQ+ +Q A P P KP P P P DV + +N + RP +++ +K Sbjct: 346 RQNYQQQWQQYNAPPRPFATKPQPRPEPMDVDGSVQTRNINYMNRPHSDINKRQK 400
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 32.7 bits (73), Expect = 1.00 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 435 PEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQA 322 P+Y + Y Q + Q + +P PAP+P P+ QQA Sbjct: 482 PQYQQAYGQGPPQPQALFQQQPNSSPAPAPLPSYSQQA 519
>BMP2_CHICK (Q90751) Bone morphogenetic protein 2 precursor (BMP-2) (Fragment)| Length = 353 Score = 32.7 bits (73), Expect = 1.00 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 94 RMKNELHKPTESYTKLRHHCHTLFDFLLSKLHQGQGH--HRAKNRDDNHHQPKRH 252 R+ LH+ +S+++LR L++ H G+GH H+ + R H Q KRH Sbjct: 202 RISRSLHQDEDSWSQLR-------PLLVTFGHDGKGHPLHKREKRQAKHKQRKRH 249
>TONB_HELPY (O25899) Protein tonB| Length = 285 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 Query: 477 NCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 N ES K P+ E ++ +KE T +P+P+ KP P P P Sbjct: 67 NAESAKPKEEPKEKPKKEEPKKEEPKKEVTKPKPKPKPKPKPKPKP 112
>S40B_CHITE (Q05019) Salivary gland SP38-40.B protein precursor| Length = 253 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -1 Query: 486 LAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTG---AEPEPQEKPAPSPSP 340 +A+ ++KN F K F + V+ ++ K+ G AEP+P KPAP P P Sbjct: 186 IAFGDKTKN---FDKKFAKLVQGKQKKGAKKAKGGKKAEPKPGPKPAPKPGP 234
>CLC11_HUMAN (Q9Y240) C-type lectin domain family 11 member A precursor (Stem| cell growth factor) (Lymphocyte secreted C-type lectin) (p47) (C-type lectin superfamily member 3) Length = 323 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQEKPAPSPSPADV 331 E Q E+E+ A P P P+PSP+P D+ Sbjct: 77 EMEEDQGEEEEEEATPTPSSGPSPSPTPEDI 107
>CDPK_DAUCA (P28582) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK)| Length = 532 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQ-EKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKKLKKRV 250 + Y + ++ Q A+P+PQ ++ PS P V + + +G+P ++RG+ L K + Sbjct: 30 QSYEKSSQRSQPQAQPQPQVQQTGPSLKPRQVHRPESN-TILGKPFEDIRGKYTLGKEL 87
>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein| 25) (RNA-binding region-containing protein 7) (Protein S164) Length = 784 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -1 Query: 435 PEYVEKYNQQQEKEQTGAEP-----EPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGE 271 PE E+ ++QEKE+ EP EP++KP P+ + A ++ + G G+ Sbjct: 522 PESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGD 581 Query: 270 K 268 + Sbjct: 582 E 582
>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2| Length = 945 Score = 32.0 bits (71), Expect = 1.7 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 435 PEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKKLKK 256 PE + + + E E EP+P+ +P P P PA V+ A +P A VR + Sbjct: 155 PEPIVEPEPEPEPEPE-PEPQPEPEPRPEPEPATVESGAP-----AKPEAPVRAPSRPPL 208 Query: 255 RV 250 RV Sbjct: 209 RV 210
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%) Frame = -1 Query: 534 SIRSTDGEKKRLAKASLAYNCE-SKNC----PHFRKLFPEYVEKYNQQ-QEKEQTGAEPE 373 SI ++ E + + + ++ E K C P + + VEK +++ +EKE+ EP+ Sbjct: 412 SIEPSENETSKELEPEMEFDVEPDKECKSLSPGKENINSQEVEKESEEKEEKEEKEPEPQ 471 Query: 372 PQE--KPAPSPSPADVQQAAAMVNNIGRPVAE 283 P+ +P P P P Q + ++ +PV + Sbjct: 472 PEPVAQPQPPPQPLPQSQPHSQPHSQPQPVLQ 503
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 31.6 bits (70), Expect = 2.2 Identities = 22/99 (22%), Positives = 44/99 (44%) Frame = -1 Query: 555 DDALTTGSIRSTDGEKKRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEP 376 D L + S E+ K +LA +++ P + P ++ QQQ+++Q + Sbjct: 2422 DKPLPPIQVASLRAERIAKEKKALADQQKAQQPPVTQ---PPPQQQQQQQQQQQQQQQQQ 2478 Query: 375 EPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKKLK 259 +P P P P QAA+ G+P + + + +++ Sbjct: 2479 QPPPPPQQPPPPVPQPQAASSQTPAGQPAVQPQPQPQVQ 2517 Score = 30.8 bits (68), Expect = 3.8 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 444 KLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQ 328 KL PE++ K Q+Q+ + P PQ +P P PA VQ Sbjct: 2722 KLGPEHIIKM-QKQKMQLPPQPPPPQAQPGPPQQPAQVQ 2759
>LFNG_CHICK (O12971) Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe| (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase) Length = 363 Score = 31.6 bits (70), Expect = 2.2 Identities = 24/88 (27%), Positives = 38/88 (43%) Frame = -1 Query: 594 VASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYNCESKNCPHFRKLFPEYVEKY 415 V S+ T LL M++ G R G +R ++ A + P R F +Y + Sbjct: 14 VGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAARAAGQGAPGLRS-FADYFGRL 72 Query: 414 NQQQEKEQTGAEPEPQEKPAPSPSPADV 331 ++ + +E A P P PA +P DV Sbjct: 73 SRAR-RELPAAPPSPPRPPAEDITPRDV 99
>ACN1_CAEEL (Q18581) Inactive angiotensin-converting enzyme-related protein| precursor (ACE-like non-metallopeptidase protein 1) Length = 906 Score = 31.6 bits (70), Expect = 2.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 381 EPEPQEKPAPSPSPADVQQAAAMVNNI 301 EPEP+ KP P PSP + A +NI Sbjct: 74 EPEPEPKPEPEPSPTPEPEPAIKFDNI 100
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/71 (22%), Positives = 29/71 (40%) Frame = +1 Query: 40 LQFYHHKSSSPCLQGGSPRMKNELHKPTESYTKLRHHCHTLFDFLLSKLHQGQGHHRAKN 219 +Q H Q +M+ + H + +L+ H H + HQ Q H + + Sbjct: 153 MQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQ 212 Query: 220 RDDNHHQPKRH 252 + HHQ ++H Sbjct: 213 QQQQHHQQQQH 223
>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC| 3.1.3.16) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory protein) Length = 1696 Score = 31.2 bits (69), Expect = 2.9 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = -1 Query: 426 VEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAA 319 + K++Q+Q+++Q + + Q++P P P P Q A Sbjct: 1640 IMKHHQEQQQQQQQQQQQQQQQPPPPPQPPQAQAQA 1675
>CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 737 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/72 (23%), Positives = 32/72 (44%) Frame = -1 Query: 537 GSIRSTDGEKKRLAKASLAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKP 358 G + + +KR ++ + +S+N P+ + +++ + EPEPQ +P Sbjct: 589 GETKKSKRGRKRKMRSKKEDSSDSENAE------PDLDDNEEEEEPAVEIEPEPEPQPQP 642 Query: 357 APSPSPADVQQA 322 P P P V A Sbjct: 643 QPQPQPQPVAPA 654
>XG_HUMAN (P55808) Glycoprotein Xg precursor (Protein PBDX)| Length = 180 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/49 (26%), Positives = 22/49 (44%) Frame = -1 Query: 441 LFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGR 295 ++P+ Y Q E +G P+ KP P P P + + N++ R Sbjct: 44 IYPKPKPPYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGYFNDVDR 92
>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) Length = 1692 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -1 Query: 411 QQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKKLKKRVPF 244 Q Q + Q +P+PQ +P P P P Q+ +P G + ++ +PF Sbjct: 978 QAQAQPQPQPQPQPQPQPQPQPQPQPQSQSQPQPQPQPQPQRPAFGPQPTQQPLPF 1033
>5HT1R_DROME (P20905) 5-hydroxytryptamine receptor 1 (5-HT receptor) (Serotonin| receptor 1) (5HT-dro) Length = 564 Score = 31.2 bits (69), Expect = 2.9 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Frame = +2 Query: 116 NQQKAIQNYGTTVTLYLTFYCQ--SCIRGKA-ITAP----KTETITTISQNGTRXXXXXX 274 N QK I T+TL++ F + GKA + AP +TE+ T+ N + Sbjct: 25 NHQKLIST--ATLTLFVLFLSSWIAYAAGKATVPAPLVEGETESATSQDFNSSSAFLGAI 82 Query: 275 PRTSATGLPILFTIAAAC*TSAGEGDGAGFSCGSGSAPVCSFSCCWLYFSTYSG 436 S+TG + +G G G+G GSGS + S + + +Y G Sbjct: 83 ASASSTG------------SGSGSGSGSGSGSGSGSYGLASMNSSPIAIVSYQG 124
>DNAJ_METTE (Q9UXR9) Chaperone protein dnaJ| Length = 387 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 10/90 (11%) Frame = +2 Query: 158 LYLTFYCQSCIRGKAITAPKTETITTISQNGTRXXXXXXP----------RTSATGLPIL 307 LY+TF + K I P+TE + S G R RT+ TGL + Sbjct: 120 LYITFEEAAFGVRKDIDVPRTERCSNCSGTGARPGTSPKRCPTCGGTGQIRTTRTGLGMQ 179 Query: 308 FTIAAAC*TSAGEGDGAGFSCGSGSAPVCS 397 F C T G+G C PVCS Sbjct: 180 FVSTTTCSTCRGKGQVIESPC-----PVCS 204
>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 476 Score = 31.2 bits (69), Expect = 2.9 Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = -1 Query: 495 KASLAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAA 316 +++ +N E +N RK + ++++QQQ+++Q + Q++ P P PA+ QQA++ Sbjct: 2 QSNKTFNLEKQNHTP-RKHHQHHHQQHHQQQQQQQ-----QQQQQQPPPPIPANGQQASS 55 Query: 315 MVNNIGRPVAEVR--GEKKLKKR 253 + + R GEK +R Sbjct: 56 QNEGLTIDLKNFRKPGEKTFTQR 78
>NOL3_MOUSE (Q9D1X0) Nucleolar protein 3| Length = 220 Score = 30.8 bits (68), Expect = 3.8 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 435 PEYVEKYNQQQEKE-QTGAEPEPQEKPAPSPSP 340 P+ ++ N +QE E + EPEP+ +P P P P Sbjct: 165 PDLEQEMNPEQEPEPEPEPEPEPEPEPEPEPEP 197
>ACSL4_MOUSE (Q9QUJ7) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4) Length = 711 Score = 30.8 bits (68), Expect = 3.8 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -1 Query: 447 RKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRP 292 R +PE +E ++ Q E+ GA+PE P P+P+D+ + GRP Sbjct: 235 RAEYPEGLEIHSMQSV-EELGAKPENLSVPPSRPTPSDMAIVMYTSGSTGRP 285
>ACSL4_RAT (O35547) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) Length = 670 Score = 30.8 bits (68), Expect = 3.8 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -1 Query: 531 IRSTDGEKKRLAKASLAYNCESK-----NCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQ 367 I S + + +L A L NC N R +PE +E ++ Q E+ G++PE Sbjct: 161 ITSVELLESKLKAALLDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSV-EELGSKPENS 219 Query: 366 EKPAPSPSPADVQQAAAMVNNIGRP 292 P P+P+D+ + GRP Sbjct: 220 SIPPSRPTPSDMAIVMYTSGSTGRP 244
>CTCF_MOUSE (Q61164) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 736 Score = 30.8 bits (68), Expect = 3.8 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 414 NQQQEKEQTGAEPEPQEKPAPSPSPADVQQA 322 N+++E+ EPEP+ +P P P P V A Sbjct: 623 NEEEEEPAVEIEPEPEPQPQPPPPPQPVAPA 653
>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 473 Score = 30.4 bits (67), Expect = 4.9 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Frame = -1 Query: 495 KASLAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAA 316 +++ A+N E +N RK + ++++QQQ+++Q Q++P P P PA+ QQA++ Sbjct: 2 QSNKAFNLEKQNHTP-RKHHQHHHQQHHQQQQQQQ-------QQQPPP-PIPANGQQASS 52 Query: 315 MVNNIGRPVAEVR--GEKKLKKR 253 + + R GEK +R Sbjct: 53 QNEGLTIDLKNFRKPGEKTFTQR 75
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 30.4 bits (67), Expect = 4.9 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -1 Query: 435 PEYVEKYNQQQEKEQTGAEPEPQEKPAPSP---SPADVQQAAAMVNNIGRPVAEV 280 PE+++K++ + + + P PAP P +PA A + N+ RP E+ Sbjct: 516 PEHMDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPPAFPGLQNLYRPPMEI 570
>CHEB1_PSEPU (O52262) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 374 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Frame = -1 Query: 468 SKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQ----AAAMVNNI 301 S+N +++ E V ++ + + A P P P P+ SPA A A Sbjct: 112 SRNPDKVKQMLCEKVHTISRSNRRLGSYARPAPVAAPVPASSPAPASSFASPAPARPAAT 171 Query: 300 GRPVAEVRGEKKLKKRVPFWLMVVIVSVFGAV 205 R A KR P+ L+ + S G V Sbjct: 172 ARAAAPAASHSPAPKRKPYKLVAIGTSTGGPV 203
>R3HD2_MOUSE (Q80TM6) R3H domain-containing protein 2| Length = 1044 Score = 30.0 bits (66), Expect = 6.5 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 19/135 (14%) Frame = -1 Query: 633 SDFHPESWNPMWSVASILTGLLSFMMDDALTTGSIRSTDGEKKRLAKASLAYN----CES 466 SD S P + AS +G+ D++ + S G RL++ +A C Sbjct: 365 SDGSVRSMRPPVTKASSFSGISILTRGDSIGS----SKGGSAGRLSRPGMALGAPEVCNQ 420 Query: 465 KNCPH-FRKLFPEYVEKYNQQQEKEQT--GAEPEPQEK------------PAPSPSPADV 331 P R L P ++ QQQ+++Q P PQ + PA PSP V Sbjct: 421 VTSPQSVRGLLPCTAQQQQQQQQQQQQLPALPPTPQHQPPLNNHMISQPVPALQPSPQPV 480 Query: 330 QQAAAMVNNIGRPVA 286 Q + + + PV+ Sbjct: 481 QFSPSSCPQVLLPVS 495
>GCYA3_HUMAN (Q02108) Guanylate cyclase soluble subunit alpha-3 (EC 4.6.1.2)| (GCS-alpha-3) (Soluble guanylate cyclase large subunit) (GCS-alpha-1) Length = 690 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/78 (29%), Positives = 34/78 (43%) Frame = +1 Query: 37 VLQFYHHKSSSPCLQGGSPRMKNELHKPTESYTKLRHHCHTLFDFLLSKLHQGQGHHRAK 216 +L H KS+ P L P+ + L PT + K H +FD ++ L G G R Sbjct: 253 LLYSVHMKSTKPSLSPSKPQ--SSLVIPTSLFCKT-FPFHFMFDKDMTILQFGNGIRRLM 309 Query: 217 NRDDNHHQPKRHSLLQLL 270 NR D +P ++L Sbjct: 310 NRRDFQGKPNFEEYFEIL 327
>YCDA_DROME (Q9VGW1) Putative cadherin CG4509 precursor| Length = 1483 Score = 30.0 bits (66), Expect = 6.5 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = -1 Query: 447 RKLFPEYVEKYNQQQEKEQTGAEPE---PQEKPAPSPSPADVQQAAAMVNNIGRPVAEVR 277 R +P ++ + + +E+T AEPE +++PA SP D Q A + + R + R Sbjct: 1112 RTNYPSRAQENERYRRQERTYAEPENPVDRKRPARKSSPTDSQPEA--MPRLSRRDSSKR 1169 Query: 276 GEKKLKKRVP 247 G +K P Sbjct: 1170 GSRKQTSSEP 1179
>ALL5_HEVBR (Q39967) Major latex allergen Hev b 5| Length = 150 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -1 Query: 432 EYVEKYNQQQEKEQTGAEPEPQEKPA-PSPSPADVQQAAAMVNNIGRPVAEVRGEKKLKK 256 E VEK + +E + P+EKPA P P + + P A GEK ++ Sbjct: 69 EEVEKIEKTEEPAPEADQTTPEEKPAEPEPVAEEEPKHETKETETEAPAAPAEGEKPAEE 128 Query: 255 RVP 247 P Sbjct: 129 EKP 131
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel| [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 30.0 bits (66), Expect = 6.5 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -1 Query: 411 QQQEKEQTGAEPEPQEKPAPSPSPADVQ 328 Q+ ++E+ G EPEP+ +P P +P + + Sbjct: 17 QKTKQEEEGTEPEPELEPKPETAPEETE 44
>RCCR_HORVU (Q9MTQ6) Red chlorophyll catabolite reductase (EC 1.-.-.-) (RCC| reductase) (HvRCCR) (Fragment) Length = 205 Score = 30.0 bits (66), Expect = 6.5 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -1 Query: 441 LFPEYVEKYNQQQE--KEQTGAEPEPQEKPAPSPS 343 L PEY+EKY + E K++ E PQ +P SPS Sbjct: 62 LHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPS 96
>PHLA1_RAT (Q9QZA1) Pleckstrin homology-like domain family A member 1| (Proline- and glutamine-rich protein) (PQR protein) Length = 263 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = -1 Query: 495 KASLAYNCESKNCPHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 +A LA + H + P ++ Q ++ Q +P+PQ +P P P P Sbjct: 140 QAILAVKSTRQKQQHLVQQQPPQTQQIQPQPQQPQIQPQPQPQIQPQPQPQP 191
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG| repeat protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 29.6 bits (65), Expect = 8.4 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1 Query: 411 QQQEKEQTGAEPEPQEKPAPSPSPADVQQ 325 QQQ+++Q + +PQ++P P P QQ Sbjct: 96 QQQQQQQQPQQQQPQQQPQPQPQQQQPQQ 124
>MEF2A_HUMAN (Q02078) Myocyte-specific enhancer factor 2A (Serum response| factor-like protein 1) Length = 507 Score = 29.6 bits (65), Expect = 8.4 Identities = 17/73 (23%), Positives = 35/73 (47%) Frame = -1 Query: 444 KLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKK 265 ++ P ++ QQQ+++Q P+PQ +P P P P + + V+++ + G + Sbjct: 413 RMTPSGFQQQQQQQQQQQPPPPPQPQPQP-PQPQPRQ-EMGRSPVDSLSSSSSSYDGSDR 470 Query: 264 LKKRVPFWLMVVI 226 R F +V+ Sbjct: 471 EDPRGDFHSPIVL 483
>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 757 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -1 Query: 411 QQQEKEQTGAEPEPQEKPAPSPSPADVQQAA 319 Q K+Q P+P E P P P P QQ A Sbjct: 14 QGASKQQPAPPPQPPESPPPPPLPPQQQQPA 44
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 29.6 bits (65), Expect = 8.4 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -1 Query: 393 QTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVRGEKK 265 QT PQ +P P+P+P VQ ++ +PV +G K+ Sbjct: 248 QTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKR 290
>TONB_HELPJ (Q9ZJP4) Protein tonB| Length = 280 Score = 29.6 bits (65), Expect = 8.4 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 E+ +++ K++T +P+P+ KP P P P Sbjct: 84 EEPKKEEPKKETKPKPKPKPKPKPKPKP 111
>NID2_HUMAN (Q14112) Nidogen-2 precursor (NID-2) (Osteonidogen)| Length = 1375 Score = 29.6 bits (65), Expect = 8.4 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = -3 Query: 391 NWCRTRAAGETCPISFSCRCSASGSYGEQYR----KTSGRGPRRKEAEEASAVLADGGYR 224 N C A P SFSCRC G YG+ ++ TS P ++ A A A G R Sbjct: 899 NRCHPAATCYNTPGSFSCRCQ-PGYYGDGFQCIPDSTSSLTPCEQQQRHAQAQYAYPGAR 957
>CLA4_YEAST (P48562) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)| Length = 842 Score = 29.6 bits (65), Expect = 8.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQEKPAPSPSPA 337 ++ QQQ+K+Q P + P+PSPSP+ Sbjct: 374 QQQQQQQQKQQHQQYPYHHQGPSPSPSPS 402
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein phosphatase| (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 29.6 bits (65), Expect = 8.4 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -1 Query: 456 PHFRKLFPEYVEKYNQQQEKEQTGAEPEPQEKPAPSPSP 340 P + E ++ + +QQ+++Q P P + P P P P Sbjct: 1624 PELEEEVKEIMKHHQEQQQQQQQQQLPPPPQPPQPQPQP 1662
>GPA1_TRIVA (Q86D96) Guanine nucleotide-binding protein alpha-1 subunit (G| alpha-1) (GTP-binding protein alpha subunit 1) Length = 402 Score = 29.6 bits (65), Expect = 8.4 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = -1 Query: 435 PEYVEKYNQQQEKEQTGAEPEPQEKP------APSPSPADVQQAAA 316 P+ VE+ + + + Q EP+PQ +P AP+P+PA Q A Sbjct: 22 PKKVEQVPEPKPEPQPQPEPQPQPEPPKPAEPAPAPAPAPEPQKPA 67
>SYI_MYCTU (Q10765) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1041 Score = 29.6 bits (65), Expect = 8.4 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = -1 Query: 360 PAPSPSPADVQQAAAM--VNNIGRPVAEVRGEKKLKKRVPFWLMVVIV 223 PAP P+D AAM V ++ + +R KKL+ R+P ++V V Sbjct: 799 PAPDLLPSDADLVAAMDQVRDVCSAASSLRKAKKLRVRLPLPKLIVAV 846
>SYI_MYCBO (Q7VEZ0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1041 Score = 29.6 bits (65), Expect = 8.4 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = -1 Query: 360 PAPSPSPADVQQAAAM--VNNIGRPVAEVRGEKKLKKRVPFWLMVVIV 223 PAP P+D AAM V ++ + +R KKL+ R+P ++V V Sbjct: 799 PAPDLLPSDADLVAAMDQVRDVCSAASSLRKAKKLRVRLPLPKLIVAV 846
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 29.6 bits (65), Expect = 8.4 Identities = 13/41 (31%), Positives = 26/41 (63%) Frame = -1 Query: 423 EKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNI 301 ++ QQQ +E+ +P+ Q++P P PA++ A+A +N+ Sbjct: 927 QQQQQQQHQEEQQQQPQQQQQPLP---PANIASASANNSNL 964
>RIG_DROME (Q86BY9) Protein rigor mortis| Length = 1235 Score = 29.6 bits (65), Expect = 8.4 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -1 Query: 432 EYVEKYNQQQEKEQTGAEPEPQEKPAPSPSPADVQQAAAMVNNIGRPVAEVR 277 E+ + Q+EK +T P + K A S P D+ + G P+AE R Sbjct: 235 EWRSRNGGQEEKPKTKPPPLTKSKAAESDDPFDIYNFDHLEYEFGAPIAERR 286 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,372,364 Number of Sequences: 219361 Number of extensions: 2038466 Number of successful extensions: 12806 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 8743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12046 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
