ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188109.1| Oryza sativa (japonica cultivar-group), Ozsa854... 272 1e-69
2gb|AY110037.1| Zea mays CL4960_1 mRNA sequence 192 1e-45
3gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genom... 125 2e-25
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 2e-25
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
7dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
8dbj|AK071473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.62
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.62
11emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573... 44 0.62
12ref|XM_508739.1| PREDICTED: Pan troglodytes similar to NPAT (LOC... 42 2.4
13ref|NM_002519.1| Homo sapiens nuclear protein, ataxia-telangiect... 42 2.4
14gb|AF048727.1| Homo sapiens minisatellite ceb1 repeat region 42 2.4
15ref|XM_604956.2| PREDICTED: Bos taurus similar to nuclear protei... 42 2.4
16ref|XM_546538.2| PREDICTED: Canis familiaris similar to nuclear ... 42 2.4
17gb|BC050561.2| Homo sapiens nuclear protein, ataxia-telangiectas... 42 2.4
18gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, comp... 42 2.4
19gb|BC094769.1| Homo sapiens nuclear protein, ataxia-telangiectas... 42 2.4
20emb|X97186.1|HSE14 H.sapiens mRNA for E14 protein 42 2.4
21emb|CR859703.1| Pongo pygmaeus mRNA; cDNA DKFZp469B186 (from clo... 42 2.4
22dbj|AK057478.1| Homo sapiens cDNA FLJ32916 fis, clone TESTI20064... 42 2.4
23dbj|AK027880.1| Homo sapiens cDNA FLJ14974 fis, clone THYRO10013... 42 2.4
24gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, comple... 42 2.4
25gb|AC182811.1| Gasterosteus aculeatus clone VMRC28-119K14, compl... 42 2.4
26gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, c... 42 2.4
27dbj|AB179202.1| Macaca fascicularis testis cDNA clone: QtsA-1488... 42 2.4
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
29gb|AC131097.6| Homo sapiens BAC clone RP11-789L24 from 2, comple... 42 2.4
30dbj|D89854.2| Homo sapiens NPAT gene, complete cds, with ATM gene 42 2.4
31gb|AF222747.1|AF222747 Homo sapiens RanBP17 mRNA, complete cds 42 2.4
32gb|BC040356.1| Homo sapiens, Similar to nuclear protein, ataxia-... 42 2.4
33gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, comple... 42 2.4
34dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
35emb|AJ288955.1|HSA288955 Homo sapiens mRNA for hypothetical prot... 42 2.4
36emb|AJ288954.1|HSA288954 Homo sapiens mRNA for hypothetical prot... 42 2.4
37emb|AJ288953.1|HSA288953 Homo sapiens mRNA for hypothetical prot... 42 2.4
38gb|AC153071.3| Equus caballus clone CH241-77F8, complete sequence 42 2.4
39dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.4
40dbj|AP001925.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.4
41emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 2.4
42gb|U58852.1|HSU58852 Human NPAT mRNA, complete cds 42 2.4
43gb|DP000020.1| Equus caballus target 1 genomic scaffold 42 2.4
44ref|NM_022897.2| Homo sapiens RAN binding protein 17 (RANBP17), ... 42 2.4
45emb|AJ271459.1|HSA271459 Homo sapiens mRNA for hypothetical prot... 42 2.4
46dbj|D83243.1|HUMNPATA Human NPAT mRNA, complete cds 42 2.4
47gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, co... 40 9.6
48gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, com... 40 9.6
49gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 40 9.6
50emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 i... 40 9.6
51gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosom... 40 9.6
52gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome... 40 9.6
53emb|AL139413.11| Human DNA sequence from clone RP5-1033K19 on ch... 40 9.6
54gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, compl... 40 9.6
55emb|BX649540.7| Zebrafish DNA sequence from clone CH211-229O8 in... 40 9.6
56gb|AC007281.3| Homo sapiens BAC clone RP11-457F14 from 2, comple... 40 9.6
57gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 40 9.6
58emb|BX571854.11| Zebrafish DNA sequence from clone CH211-195O19 ... 40 9.6
59gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, com... 40 9.6
60emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in... 40 9.6
61gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 9.6 
>ref|NM_188109.1| Oryza sativa (japonica cultivar-group), Ozsa8541 predicted mRNA
          Length = 2400

 Score =  272 bits (137), Expect = 1e-69
 Identities = 262/301 (87%), Gaps = 2/301 (0%)
 Strand = Plus / Minus

                                                                        
Query: 401  cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
            ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||
Sbjct: 2378 cggaaatcatgcctgaatgttgtaagatttttagtgaatttatctctgttctttggttcc 2319

                                                                        
Query: 461  aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
            ||| |||| |  ||||||| ||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 2318 aagttcctagcaacatcagacatcagcttctcgaagcattgcgaaaggcgttgttgctgg 2259

                                                                        
Query: 521  tctacaggctgtgaggctaatatctgcgctctcagatcactaaacatctgttcactgatc 580
            |||||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||
Sbjct: 2258 tctacaggctgtgatgctaatatctgtgctctcaaattactaaacatctgttcactgatc 2199

                                                                        
Query: 581  attatcaaactaagtattggtctactgagactccactggttaccccgcgtcctcgaagat 640
            ||||||| ||| |||||||| ||||| |||||||| || ||| ||||| ||||| |||||
Sbjct: 2198 attatcagactcagtattggcctactaagactccattgatta-cccgcatcctcaaagat 2140

                                                                        
Query: 641  aatgatttcaaaaagtgaccttcagtatctgaggaaacaaactggggagctccccaatat 700
             ||||| |||||||| |  |||||||||||||||||| ||| |||||| ||| |||||||
Sbjct: 2139 gatgatctcaaaaagcg-tcttcagtatctgaggaaataaagtggggaactctccaatat 2081

             
Query: 701  g 701
            |
Sbjct: 2080 g 2080
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>gb|AY110037.1| Zea mays CL4960_1 mRNA sequence
          Length = 694

 Score =  192 bits (97), Expect = 1e-45
 Identities = 190/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 404 aaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttccaag 463
           |||||| |||| |||| ||| || ||||||||||||||||| |  ||||| |||||||||
Sbjct: 426 aaatcacgtctaaatgctgtcaggttttgagtgaatctgtcacgattcttaggttccaag 485

                                                                       
Query: 464 ctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctgatct 523
            ||||  ||||||| ||||| ||||||||||| |||||||| |||||||||||||| || 
Sbjct: 486 ttcctattgacatccgtcatcagcttatcgaagcactgtgaaaggcgttgttgctggtcc 545

                                                                       
Query: 524 acaggctgtgaggctaatatctgcgctctcagatcactaaacatctgttcactgatcatt 583
           |||| |||||| |||||||| |||||||| || ||||| ||||||||||||||| |||||
Sbjct: 546 acagtctgtgatgctaatatgtgcgctctgagttcactgaacatctgttcactggtcatt 605

                                                    
Query: 584 atcaaactaagtattggtctactgagactccactggttacc 624
           ||||  || |||||||||| ||| ||||||||||| |||||
Sbjct: 606 atcaggctcagtattggtcgactcagactccactgattacc 646
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>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
             sequence
          Length = 154558

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 401   cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
             ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 13494 cggaaatcatgcctgaatgttgtaagattttgagtgaatttatctctgttctttggttcc 13553

                                                                         
Query: 461   aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
             ||  || | |  ||||||||||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 13554 aaattcgtagcaacatcagtcatcagcttgtcgaagcattgcgaaaggcgttgttgctgg 13613

                        
Query: 521   tctacaggctg 531
             |||||||||||
Sbjct: 13614 tctacaggctg 13624



 Score =  103 bits (52), Expect = 8e-19
 Identities = 93/104 (89%), Gaps = 2/104 (1%)
 Strand = Plus / Plus

                                                                         
Query: 568   ctgttcactgatcattatcaaactaagtattggtctactgagactccactggttaccccg 627
             |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| ||||
Sbjct: 14496 ctgttcactgatcattatcagactcagtattggtctactaagactccactgatta-cccg 14554

                                                         
Query: 628   cgtcctcgaagataatgatttcaaaaagtgaccttcagtatctg 671
             | ||||| ||||| ||||| ||||||||||  ||||||||||||
Sbjct: 14555 catcctcaaagatgatgatctcaaaaagtg-tcttcagtatctg 14597



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 529   ctgtgaggctaatatctgcgctctcagatcactaaacatctg 570
             |||||| || |||||||| ||||||| || ||||||||||||
Sbjct: 14318 ctgtgatgccaatatctgtgctctcaaattactaaacatctg 14359



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 244   catctttcagccaatgcaaactaaactg 271
             ||||||||||||||| ||||| ||||||
Sbjct: 13332 catctttcagccaatccaaaccaaactg 13359



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 77    tccccctaacaacttggggtaacagcaatcac 108
             |||||||||||||| |||| |||||| |||||
Sbjct: 13130 tccccctaacaactcggggaaacagcgatcac 13161
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 401      cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
                ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 23177013 cggaaatcatgcctgaatgttgtaagattttgagtgaatttatctctgttctttggttcc 23177072

                                                                            
Query: 461      aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
                ||  || | |  ||||||||||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 23177073 aaattcgtagcaacatcagtcatcagcttgtcgaagcattgcgaaaggcgttgttgctgg 23177132

                           
Query: 521      tctacaggctg 531
                |||||||||||
Sbjct: 23177133 tctacaggctg 23177143



 Score =  103 bits (52), Expect = 8e-19
 Identities = 93/104 (89%), Gaps = 2/104 (1%)
 Strand = Plus / Plus

                                                                            
Query: 568      ctgttcactgatcattatcaaactaagtattggtctactgagactccactggttaccccg 627
                |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| ||||
Sbjct: 23178015 ctgttcactgatcattatcagactcagtattggtctactaagactccactgatta-cccg 23178073

                                                            
Query: 628      cgtcctcgaagataatgatttcaaaaagtgaccttcagtatctg 671
                | ||||| ||||| ||||| ||||||||||  ||||||||||||
Sbjct: 23178074 catcctcaaagatgatgatctcaaaaagtg-tcttcagtatctg 23178116



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 529      ctgtgaggctaatatctgcgctctcagatcactaaacatctg 570
                |||||| || |||||||| ||||||| || ||||||||||||
Sbjct: 23177837 ctgtgatgccaatatctgtgctctcaaattactaaacatctg 23177878



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 244      catctttcagccaatgcaaactaaactg 271
                ||||||||||||||| ||||| ||||||
Sbjct: 23176851 catctttcagccaatccaaaccaaactg 23176878



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 77       tccccctaacaacttggggtaacagcaatcac 108
                |||||||||||||| |||| |||||| |||||
Sbjct: 23176649 tccccctaacaactcggggaaacagcgatcac 23176680
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 401      cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
                ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 23170041 cggaaatcatgcctgaatgttgtaagattttgagtgaatttatctctgttctttggttcc 23170100

                                                                            
Query: 461      aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
                ||  || | |  ||||||||||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 23170101 aaattcgtagcaacatcagtcatcagcttgtcgaagcattgcgaaaggcgttgttgctgg 23170160

                           
Query: 521      tctacaggctg 531
                |||||||||||
Sbjct: 23170161 tctacaggctg 23170171



 Score =  103 bits (52), Expect = 8e-19
 Identities = 93/104 (89%), Gaps = 2/104 (1%)
 Strand = Plus / Plus

                                                                            
Query: 568      ctgttcactgatcattatcaaactaagtattggtctactgagactccactggttaccccg 627
                |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| ||||
Sbjct: 23171043 ctgttcactgatcattatcagactcagtattggtctactaagactccactgatta-cccg 23171101

                                                            
Query: 628      cgtcctcgaagataatgatttcaaaaagtgaccttcagtatctg 671
                | ||||| ||||| ||||| ||||||||||  ||||||||||||
Sbjct: 23171102 catcctcaaagatgatgatctcaaaaagtg-tcttcagtatctg 23171144



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 529      ctgtgaggctaatatctgcgctctcagatcactaaacatctg 570
                |||||| || |||||||| ||||||| || ||||||||||||
Sbjct: 23170865 ctgtgatgccaatatctgtgctctcaaattactaaacatctg 23170906



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 244      catctttcagccaatgcaaactaaactg 271
                ||||||||||||||| ||||| ||||||
Sbjct: 23169879 catctttcagccaatccaaaccaaactg 23169906



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 77       tccccctaacaacttggggtaacagcaatcac 108
                |||||||||||||| |||| |||||| |||||
Sbjct: 23169677 tccccctaacaactcggggaaacagcgatcac 23169708
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                           
Query: 401     cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
               ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||
Sbjct: 9793876 cggaaatcatgcctgaatgttgtaagatttttagtgaatttatctctgttctttggttcc 9793935

                                                                           
Query: 461     aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
               ||| |||| |  ||||||| ||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 9793936 aagttcctagcaacatcagacatcagcttctcgaagcattgcgaaaggcgttgttgctgg 9793995

                          
Query: 521     tctacaggctg 531
               |||||||||||
Sbjct: 9793996 tctacaggctg 9794006



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 77/88 (87%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                           
Query: 568     ctgttcactgatcattatcaaactaagtattggtctactgagactccactggttaccccg 627
               |||||||||||||||||||| ||| |||||||| ||||| |||||||| || ||| ||||
Sbjct: 9795604 ctgttcactgatcattatcagactcagtattggcctactaagactccattgatta-cccg 9795662

                                           
Query: 628     cgtcctcgaagataatgatttcaaaaag 655
               | ||||| ||||| ||||| ||||||||
Sbjct: 9795663 catcctcaaagatgatgatctcaaaaag 9795690



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 529     ctgtgaggctaatatctgcgctctcagatcactaaacatctg 570
               |||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 9795418 ctgtgatgctaatatctgtgctctcaaattactaaacatctg 9795459



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 239     ccctacatctttcagccaatgcaaactaaactg 271
               |||| ||||||||||||||| ||||| ||||||
Sbjct: 9793704 cccttcatctttcagccaatccaaaccaaactg 9793736
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025D05
          Length = 145684

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 401   cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
             ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||
Sbjct: 58126 cggaaatcatgcctgaatgttgtaagatttttagtgaatttatctctgttctttggttcc 58185

                                                                         
Query: 461   aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
             ||| |||| |  ||||||| ||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 58186 aagttcctagcaacatcagacatcagcttctcgaagcattgcgaaaggcgttgttgctgg 58245

                        
Query: 521   tctacaggctg 531
             |||||||||||
Sbjct: 58246 tctacaggctg 58256



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 77/88 (87%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                         
Query: 568   ctgttcactgatcattatcaaactaagtattggtctactgagactccactggttaccccg 627
             |||||||||||||||||||| ||| |||||||| ||||| |||||||| || ||| ||||
Sbjct: 59854 ctgttcactgatcattatcagactcagtattggcctactaagactccattgatta-cccg 59912

                                         
Query: 628   cgtcctcgaagataatgatttcaaaaag 655
             | ||||| ||||| ||||| ||||||||
Sbjct: 59913 catcctcaaagatgatgatctcaaaaag 59940



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 529   ctgtgaggctaatatctgcgctctcagatcactaaacatctg 570
             |||||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 59668 ctgtgatgctaatatctgtgctctcaaattactaaacatctg 59709



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 239   ccctacatctttcagccaatgcaaactaaactg 271
             |||| ||||||||||||||| ||||| ||||||
Sbjct: 57954 cccttcatctttcagccaatccaaaccaaactg 57986
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>dbj|AK071473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098B17, full
            insert sequence
          Length = 1668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Minus

                                                                        
Query: 401  cggaaatcatgtctgaatgttgtgagattttgagtgaatctgtctctgttctttggttcc 460
            ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||||||||||||
Sbjct: 1234 cggaaatcatgcctgaatgttgtaagatttttagtgaatttatctctgttctttggttcc 1175

                                                                        
Query: 461  aagctccttgtgacatcagtcatgagcttatcgaaacactgtgagaggcgttgttgctga 520
            ||| |||| |  ||||||| ||| ||||| ||||| || || || |||||||||||||| 
Sbjct: 1174 aagttcctagcaacatcagacatcagcttctcgaagcattgcgaaaggcgttgttgctgg 1115

                       
Query: 521  tctacaggctg 531
            |||||||||||
Sbjct: 1114 tctacaggctg 1104
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 35       ttctaactttttaaccatgaat 56
                ||||||||||||||||||||||
Sbjct: 24672426 ttctaactttttaaccatgaat 24672447
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 35       ttctaactttttaaccatgaat 56
                ||||||||||||||||||||||
Sbjct: 24600632 ttctaactttttaaccatgaat 24600653
to top
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 143895

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 35     ttctaactttttaaccatgaat 56
              ||||||||||||||||||||||
Sbjct: 117292 ttctaactttttaaccatgaat 117313
to top
>ref|XM_508739.1| PREDICTED: Pan troglodytes similar to NPAT (LOC451529), mRNA
          Length = 4236

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2100 ttcagtatctgaggaaacaaa 2080
to top
>ref|NM_002519.1| Homo sapiens nuclear protein, ataxia-telangiectasia locus (NPAT),
            mRNA
          Length = 5895

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2299 ttcagtatctgaggaaacaaa 2279
to top
>gb|AF048727.1| Homo sapiens minisatellite ceb1 repeat region
          Length = 35491

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   tgaatctgtctctgttctttg 455
             |||||||||||||||||||||
Sbjct: 23326 tgaatctgtctctgttctttg 23346
to top
>ref|XM_604956.2| PREDICTED: Bos taurus similar to nuclear protein,
            ataxia-telangiectasia locus (LOC526583), partial mRNA
          Length = 3583

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2835 ttcagtatctgaggaaacaaa 2815
to top
>ref|XM_546538.2| PREDICTED: Canis familiaris similar to nuclear protein,
            ataxia-telangiectasia locus (LOC489420), mRNA
          Length = 4727

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2307 ttcagtatctgaggaaacaaa 2287
to top
>gb|BC050561.2| Homo sapiens nuclear protein, ataxia-telangiectasia locus, mRNA (cDNA
            clone IMAGE:5553400), partial cds
          Length = 3746

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2352 ttcagtatctgaggaaacaaa 2332
to top
>gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, complete sequence
          Length = 188643

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 661    ttcagtatctgaggaaacaaa 681
              |||||||||||||||||||||
Sbjct: 112266 ttcagtatctgaggaaacaaa 112286
to top
>gb|BC094769.1| Homo sapiens nuclear protein, ataxia-telangiectasia locus, mRNA (cDNA
            clone IMAGE:30519841), with apparent retained intron
          Length = 3961

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2372 ttcagtatctgaggaaacaaa 2352
to top
>emb|X97186.1|HSE14 H.sapiens mRNA for E14 protein
          Length = 5895

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2299 ttcagtatctgaggaaacaaa 2279
to top
>emb|CR859703.1| Pongo pygmaeus mRNA; cDNA DKFZp469B186 (from clone DKFZp469B186)
          Length = 3757

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2389 ttcagtatctgaggaaacaaa 2369
to top
>dbj|AK057478.1| Homo sapiens cDNA FLJ32916 fis, clone TESTI2006483, moderately
            similar to Homo sapiens RAN binding protein 16 mRNA
          Length = 1933

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 1532 agattttgggtgaacctgtctctgttctt 1504
to top
>dbj|AK027880.1| Homo sapiens cDNA FLJ14974 fis, clone THYRO1001347, moderately
            similar to Homo sapiens RAN binding protein 16 mRNA
          Length = 3422

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3021 agattttgggtgaacctgtctctgttctt 2993
to top
>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    ggtatttacagcaatgcagaa 352
              |||||||||||||||||||||
Sbjct: 130588 ggtatttacagcaatgcagaa 130568
to top
>gb|AC182811.1| Gasterosteus aculeatus clone VMRC28-119K14, complete sequence
          Length = 130423

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 410  tgtctgaatgttgtgagattt 430
            |||||||||||||||||||||
Sbjct: 4707 tgtctgaatgttgtgagattt 4687
to top
>gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, complete sequence
          Length = 169521

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   tcagccaatgcaaactaaact 270
             |||||||||||||||||||||
Sbjct: 48757 tcagccaatgcaaactaaact 48737
to top
>dbj|AB179202.1| Macaca fascicularis testis cDNA clone: QtsA-14881, similar to human
            RAN binding protein 17 (RANBP17), mRNA, RefSeq:
            NM_022897.2
          Length = 2522

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 2099 agattttgggtgaacctgtctctgttctt 2071
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 577      gatcattatcaaactaagtattggt 601
                ||||||||||||||||| |||||||
Sbjct: 23806310 gatcattatcaaactaaatattggt 23806334
to top
>gb|AC131097.6| Homo sapiens BAC clone RP11-789L24 from 2, complete sequence
          Length = 187030

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 435  tgaatctgtctctgttctttg 455
            |||||||||||||||||||||
Sbjct: 7457 tgaatctgtctctgttctttg 7437
to top
>dbj|D89854.2| Homo sapiens NPAT gene, complete cds, with ATM gene
          Length = 10733

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 6444 ttcagtatctgaggaaacaaa 6424
to top
>gb|AF222747.1|AF222747 Homo sapiens RanBP17 mRNA, complete cds
          Length = 3594

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3193 agattttgggtgaacctgtctctgttctt 3165
to top
>gb|BC040356.1| Homo sapiens, Similar to nuclear protein, ataxia-telangiectasia
            locus, clone IMAGE:4510421, mRNA, partial cds
          Length = 4212

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2358 ttcagtatctgaggaaacaaa 2338
to top
>gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, complete sequence
          Length = 193894

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   tgaatctgtctctgttctttg 455
             |||||||||||||||||||||
Sbjct: 53445 tgaatctgtctctgttctttg 53465
to top
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030C08
          Length = 163423

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 577   gatcattatcaaactaagtattggt 601
             ||||||||||||||||| |||||||
Sbjct: 27976 gatcattatcaaactaaatattggt 28000
to top
>emb|AJ288955.1|HSA288955 Homo sapiens mRNA for hypothetical protein (ORF3, splice variant 14
            c) located at the chromosomal breakpoint t(5;14)(q34;q11)
          Length = 4570

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3319 agattttgggtgaacctgtctctgttctt 3291
to top
>emb|AJ288954.1|HSA288954 Homo sapiens mRNA for hypothetical protein (ORF2, splice variant 14
            b/c) located at the chromosomal breakpoint
            t(5;14)(q34;q11)
          Length = 4750

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3500 agattttgggtgaacctgtctctgttctt 3472
to top
>emb|AJ288953.1|HSA288953 Homo sapiens mRNA for hypothetical protein (ORF3, splice variant 14
            c/e) located at the chromosomal breakpoint
            t(5;14)(q34;q11)
          Length = 4630

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3379 agattttgggtgaacctgtctctgttctt 3351
to top
>gb|AC153071.3| Equus caballus clone CH241-77F8, complete sequence
          Length = 245146

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 646    tttcaaaaagtgaccttcagt 666
              |||||||||||||||||||||
Sbjct: 161973 tttcaaaaagtgaccttcagt 161993
to top
>dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-144G7, complete
              sequence
          Length = 165164

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 661    ttcagtatctgaggaaacaaa 681
              |||||||||||||||||||||
Sbjct: 157297 ttcagtatctgaggaaacaaa 157317
to top
>dbj|AP001925.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-241D13, complete
            sequence
          Length = 180163

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 6762 ttcagtatctgaggaaacaaa 6782
to top
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 355     gcctccttcaaacttgcaagt 375
               |||||||||||||||||||||
Sbjct: 2500385 gcctccttcaaacttgcaagt 2500405
to top
>gb|U58852.1|HSU58852 Human NPAT mRNA, complete cds
          Length = 3840

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2265 ttcagtatctgaggaaacaaa 2245
to top
>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 646    tttcaaaaagtgaccttcagt 666
              |||||||||||||||||||||
Sbjct: 161973 tttcaaaaagtgaccttcagt 161993
to top
>ref|NM_022897.2| Homo sapiens RAN binding protein 17 (RANBP17), mRNA
          Length = 4450

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3201 agattttgggtgaacctgtctctgttctt 3173
to top
>emb|AJ271459.1|HSA271459 Homo sapiens mRNA for hypothetical protein (ORF1) located at the
            chromosomal breakpoint t(5;14)(q33-q34;q11)
          Length = 4450

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 425  agattttgagtgaatctgtctctgttctt 453
            |||||||| ||||| ||||||||||||||
Sbjct: 3201 agattttgggtgaacctgtctctgttctt 3173
to top
>dbj|D83243.1|HUMNPATA Human NPAT mRNA, complete cds
          Length = 5900

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 661  ttcagtatctgaggaaacaaa 681
            |||||||||||||||||||||
Sbjct: 2331 ttcagtatctgaggaaacaaa 2311
to top
>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence
          Length = 221632

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 672   aggaaacaaactggggagct 691
             ||||||||||||||||||||
Sbjct: 40751 aggaaacaaactggggagct 40732
to top
>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tgcctgttgtccccctaaca 87
              ||||||||||||||||||||
Sbjct: 179675 tgcctgttgtccccctaaca 179694
to top
>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 672  aggaaacaaactggggagct 691
            ||||||||||||||||||||
Sbjct: 9024 aggaaacaaactggggagct 9043
to top
>emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 in linkage group 16,
             complete sequence
          Length = 170876

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cttttcaccacagcatgcag 230
             ||||||||||||||||||||
Sbjct: 39586 cttttcaccacagcatgcag 39567
to top
>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence
          Length = 131182

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   tgttcactgatcattatcaa 588
             ||||||||||||||||||||
Sbjct: 95015 tgttcactgatcattatcaa 94996
to top
>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence
          Length = 208096

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   ttgtgagattttgagtgaat 439
             ||||||||||||||||||||
Sbjct: 99490 ttgtgagattttgagtgaat 99509
to top
>emb|AL139413.11| Human DNA sequence from clone RP5-1033K19 on chromosome 1 Contains a
             transcription elongation factor B (SIII) polypeptide 1
             (15kDa, elongin C) (TCEB1) pseudogene, a pseudogene
             similar to part of BET1 homolog (S. cerevisiae) (BET1),
             the RPE65 gene for 65kDa retinal pigment
             epithelium-specific protein and the 3' end of the gene for
              cell cycle control protein SDP35 (SDP35), complete
             sequence
          Length = 103139

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 637   agataatgatttcaaaaagt 656
             ||||||||||||||||||||
Sbjct: 47957 agataatgatttcaaaaagt 47938
to top
>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence
          Length = 183541

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tgcctgttgtccccctaaca 87
              ||||||||||||||||||||
Sbjct: 106819 tgcctgttgtccccctaaca 106800
to top
>emb|BX649540.7| Zebrafish DNA sequence from clone CH211-229O8 in linkage group 3,
             complete sequence
          Length = 120836

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   aactgcttttcaccacagcatgca 229
             ||||||||||||||||| ||||||
Sbjct: 78668 aactgcttttcaccacaccatgca 78691
to top
>gb|AC007281.3| Homo sapiens BAC clone RP11-457F14 from 2, complete sequence
          Length = 179343

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    caaacaagttggtatttaca 341
              ||||||||||||||||||||
Sbjct: 109393 caaacaagttggtatttaca 109374
to top
>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 672    aggaaacaaactggggagct 691
              ||||||||||||||||||||
Sbjct: 177508 aggaaacaaactggggagct 177489
to top
>emb|BX571854.11| Zebrafish DNA sequence from clone CH211-195O19 in linkage group 20,
              complete sequence
          Length = 194209

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    atctttcagccaatgcaaac 264
              ||||||||||||||||||||
Sbjct: 148255 atctttcagccaatgcaaac 148274
to top
>gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, complete sequence
          Length = 198284

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    tgttcactgatcattatcaa 588
              ||||||||||||||||||||
Sbjct: 193952 tgttcactgatcattatcaa 193971
to top
>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
              complete sequence
          Length = 180576

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cttttcaccacagcatgcag 230
              ||||||||||||||||||||
Sbjct: 151549 cttttcaccacagcatgcag 151530
to top
>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     tctttcagccaatgcaaact 265
               ||||||||||||||||||||
Sbjct: 2824114 tctttcagccaatgcaaact 2824133


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,750,973
Number of Sequences: 3902068
Number of extensions: 5750973
Number of successful extensions: 99162
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98844
Number of HSP's gapped (non-prelim): 314
length of query: 703
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 680
effective length of database: 17,143,297,704
effective search space: 11657442438720
effective search space used: 11657442438720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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