Clone Name | rbasd11f09 |
---|---|
Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 72.0 bits (175), Expect = 2e-12 Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 9/131 (6%) Frame = -2 Query: 656 GCLRRYNRLAFHHNREXXXXXXXXXXKYPKTKIMYGDYFKAAMQFVVSPGKFGFSTALQA 477 GC + YN +A H N + P ++ D + P K GF L Sbjct: 245 GCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLIT 304 Query: 476 CCGAGGSGAYNFNLKKKCGEA-----GASV----CSNPSAYVSWDGIHMTEAAYRMVANG 324 CCG GG YNF++ CG+ G + C+ PS V+WDG H TEAA + Sbjct: 305 CCGYGGK--YNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQ 362 Query: 323 WLNGPYASPPI 291 G ++ PP+ Sbjct: 363 ISTGAFSDPPV 373
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 58.2 bits (139), Expect = 2e-08 Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 9/127 (7%) Frame = -2 Query: 686 SKKSDYNARTGCLRRYNRLAFHHNREXXXXXXXXXXKYPKTKIMYGDYFKAAMQFVVSPG 507 +K SD+++ GC+ N LA N + I Y D + + V Sbjct: 234 NKASDFDSH-GCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQ 292 Query: 506 KFGFSTALQACCGAGGSGAYNFNLKKKCG----EAGASV-----CSNPSAYVSWDGIHMT 354 GF +L +CCG GG YN+N CG G V C P V WDG+H T Sbjct: 293 GHGFKGSLVSCCGHGGK--YNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFT 350 Query: 353 EAAYRMV 333 +AA + + Sbjct: 351 QAANKFI 357
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 53.9 bits (128), Expect = 4e-07 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = -2 Query: 572 PKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAG--GSGAYNFNLKKKCGEAGASVC 399 P + +Y D + Q + +P +GF + CC G +GA C ++ + +C Sbjct: 446 PNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGAL-------CKKSTSKIC 498 Query: 398 SNPSAYVSWDGIHMTEAAYRMV 333 N S+Y+ WDG+H T+ AY+ + Sbjct: 499 PNTSSYLFWDGVHPTQRAYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 49.7 bits (117), Expect = 8e-06 Identities = 25/79 (31%), Positives = 39/79 (49%) Frame = -2 Query: 572 PKTKIMYGDYFKAAMQFVVSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGEAGASVCSN 393 P + I+YGD + + + SP +GF + CC G + F C E SN Sbjct: 363 PNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVF-----CKERTLKNMSN 417 Query: 392 PSAYVSWDGIHMTEAAYRM 336 S+Y+ WDG+H ++ AY + Sbjct: 418 ASSYLFWDGLHPSQRAYEI 436
>MT1_TETTH (Q8T6B3) Metallothionein-1 (MT-1)| Length = 107 Score = 34.3 bits (77), Expect = 0.37 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +2 Query: 614 CCDGRPDGCIFGGTRCARCSQTSCCC 691 CC G +GC + G +C + +++ CCC Sbjct: 42 CCTGTGEGCKWTGCKCCQPAKSGCCC 67
>MT1_TETPI (P80394) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 33.1 bits (74), Expect = 0.82 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 614 CCDGRPDGCIFGGTRCARCSQTSCCC 691 CC G +GC G +C + +++ CCC Sbjct: 42 CCTGTGEGCKCTGCKCCQPAKSGCCC 67
>MT1_TETPY (O97388) Metallothionein-1 precursor (MT-1) [Contains:| Metallothionein-2 (MT-2)] Length = 107 Score = 32.7 bits (73), Expect = 1.1 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +2 Query: 614 CCDGRPDGCIFGGTRCARCSQTSCCC 691 CC G +GC G +C +++ CCC Sbjct: 42 CCTGTGEGCKCTGCKCCEPAKSGCCC 67
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 32.3 bits (72), Expect = 1.4 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 380 VSWDGIHMTEAAYRMVANGW 321 +SWDG+H++E Y +AN W Sbjct: 114 ISWDGLHLSEIGYTKIANIW 133
>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)| Length = 162 Score = 30.4 bits (67), Expect = 5.3 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +2 Query: 614 CCDGRPDGCIFGGTRCARCSQTSCCC 691 CC G +GC +C + Q CCC Sbjct: 97 CCTGTGEGCKCTSCQCCKPVQQGCCC 122
>MUTB_PORGI (Q59677) Methylmalonyl-CoA mutase large subunit (EC 5.4.99.2)| (MCM-alpha) Length = 715 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = -2 Query: 518 VSPGKFGFSTALQACCGAGGSGAYNFNLKKKCGEAGASVCSNPSAYVSWDGIHMTEAAYR 339 ++ G+ G S A G ++ + G+AG S+CS V +DGI +++ + Sbjct: 101 LASGQKGLSVAFDLATHRGYDADHS-RVVGDVGKAGVSICSLEDMKVLFDGIPLSKMSVS 159 Query: 338 MVANG 324 M NG Sbjct: 160 MTMNG 164
>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2492 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 460 PPAPQHACNAVLKPNFPGLTTNCI 531 P ACNA+LK NFP + + CI Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025
>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2492 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 460 PPAPQHACNAVLKPNFPGLTTNCI 531 P ACNA+LK NFP + + CI Sbjct: 2002 PKVAVEACNAMLKENFPTVASYCI 2025
>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2485 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 460 PPAPQHACNAVLKPNFPGLTTNCI 531 P ACNA+LK NFP + + CI Sbjct: 1995 PKVAVEACNAMLKENFPTVASYCI 2018 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,312,408 Number of Sequences: 219361 Number of extensions: 1382195 Number of successful extensions: 3700 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3693 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)