>APBE_TREPA (O83774) Thiamine biosynthesis lipoprotein apbE precursor|
          Length = 362

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 215 WNCGV*VCALPGLSSCGGSLRKAE 286
           W  GV VC L G+ SCGG  R  E
Sbjct: 8   WRIGVLVCILCGVGSCGGRARVRE 31

>AIRE_HUMAN (O43918) Autoimmune regulator (Autoimmune polyendocrinopathy|
           candidiasis ectodermal dystrophy protein) (APECED
           protein)
          Length = 545

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 14/60 (23%)
 Frame = +2

Query: 365 LPSGLFSIGR-----PGEPKGEVAWSPAVLVRRRLPALPP---------EGLHLLLCQGP 502
           LP GL S G      PGEP   +A     LV + LPA P            LH LLC GP
Sbjct: 366 LPPGLRSAGEEVRGPPGEP---LAGMDTTLVYKHLPAPPSAAPLPGLDSSALHPLLCVGP 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,038,905
Number of Sequences: 219361
Number of extensions: 1652833
Number of successful extensions: 4256
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4256
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)