ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predic... 230 2e-57
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
3dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
4dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 230 2e-57
5dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
6dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
7dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 2e-57
8gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, m... 208 8e-51
9gb|AY104328.1| Zea mays PCO078649 mRNA sequence 208 8e-51
10ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predic... 190 2e-45
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 190 2e-45
12dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 2e-45
13emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 190 2e-45
14dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA... 190 2e-45
15emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 190 2e-45
16dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
17ref|NM_190839.1| Oryza sativa (japonica cultivar-group), predic... 54 3e-04
18gb|AY836649.1| Uncultured bacterium clone BD8802 pectate lyase g... 48 0.017
19gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial... 46 0.068
20gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 44 0.27
21ref|NM_116941.1| Arabidopsis thaliana unknown protein AT4G08710 ... 42 1.1
22gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
23emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, comp... 42 1.1
24gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.1
25emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, ... 42 1.1
26emb|AL161813.1|ATT32A17 Arabidopsis thaliana DNA chromosome 4, B... 42 1.1
27gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
28gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.1
29ref|NM_001027047.1| Caenorhabditis elegans F59B10.4a (F59B10.4) ... 42 1.1
30ref|NM_001027048.1| Caenorhabditis elegans F59B10.4b (F59B10.4) ... 42 1.1
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
34dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
35dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
36dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
37dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
39emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311... 42 1.1
40emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.1
41ref|NM_126075.4| Arabidopsis thaliana transcription factor AT5G6... 40 4.2
42gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.2
43gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 4.2
44gb|AY772449.1| Rhodococcus equi strain 103+ heat shock protein (... 40 4.2
45ref|XM_953430.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.2
46ref|XM_330473.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.2
47gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 4.2
48gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome... 40 4.2
49ref|XM_656577.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.2
50ref|XM_569485.1| Cryptococcus neoformans var. neoformans JEC21 t... 40 4.2
51gb|AF043697.2| Caenorhabditis elegans cosmid F56C11, complete se... 40 4.2
52ref|XM_790314.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.2
53gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 4.2
54emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.2
55emb|AJ318872.1|GGN318872 Gnetum gnemon partial mRNA for putative... 40 4.2
56gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 4.2
57gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map... 40 4.2
58gb|AY062538.1| Arabidopsis thaliana SCARECROW gene regulator (At... 40 4.2
59gb|DP000052.1| Sus scrofa target 126 genomic scaffold 40 4.2
60gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 4.2
61gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosom... 40 4.2
62dbj|AK035292.1| Mus musculus adult male urinary bladder cDNA, RI... 40 4.2
63gb|AY150563.1| Aspergillus nidulans SipA3 gene, complete cds 40 4.2
64emb|BX830446.1|CNS0A04D Arabidopsis thaliana Full-length cDNA Co... 40 4.2
65emb|BX832347.1|CNS09ZLX Arabidopsis thaliana Full-length cDNA Co... 40 4.2
66gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, c... 40 4.2
67gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, ... 40 4.2
68gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.2
69gb|BT002580.1| Arabidopsis thaliana SCARECROW gene regulator (At... 40 4.2
70gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decar... 40 4.2
71dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 4.2
72emb|AJ519722.2|YEN519722 Yersinia enterocolitica partial cryptic... 40 4.2
73dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.2
74emb|AJ347753.1|BCE347753 Burkholderia cepacia bcrA gene for mult... 40 4.2
75ref|XM_310477.2| Anopheles gambiae str. PEST ENSANGP00000019255 ... 40 4.2
76emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 4.2
77gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 4.2 
>ref|NM_190784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                       
Query: 157 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 741

                                                                       
Query: 217 acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
           |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 740 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 682

                                                       
Query: 277 gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 681 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 638
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                            
Query: 157      tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
                ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37692662 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 37692603

                                                                            
Query: 217      acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
                |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 37692602 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 37692544

                                                            
Query: 277      gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
                ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 37692543 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 37692500



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                            
Query: 223      ttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgagctg 282
                |||||||| | ||||||||||||||  ||||||||| |  |||||||| |||||||||||
Sbjct: 33384238 ttgaagaggatgagcggctcgatctaactgatgggg-atgccggtctcaatgttgagctg 33384180

                                       
Query: 283      cgccagcgcgcccttgcccgtga 305
                | |||| ||||||||||| ||||
Sbjct: 33384179 ccccagggcgcccttgccggtga 33384157



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 81       acaaacaggcaaagcacgtacgtac 105
                |||||| ||||||||||||||||||
Sbjct: 29256942 acaaaccggcaaagcacgtacgtac 29256918
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                          
Query: 157    tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
              ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153136 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 153077

                                                                          
Query: 217    acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
              |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 153076 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 153018

                                                          
Query: 277    gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
              ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 153017 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 152974
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>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                         
Query: 157   tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
             ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20963 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 20904

                                                                         
Query: 217   acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
             |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 20903 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 20845

                                                         
Query: 277   gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
             ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 20844 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 20801
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>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full
           insert sequence
          Length = 1055

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                       
Query: 157 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826

                                                                       
Query: 217 acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
           |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 767

                                                       
Query: 277 gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 766 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 723
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>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full
           insert sequence
          Length = 1057

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                       
Query: 157 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 829

                                                                       
Query: 217 acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
           |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 828 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 770

                                                       
Query: 277 gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 769 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 726
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>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full
           insert sequence
          Length = 1064

 Score =  230 bits (116), Expect = 2e-57
 Identities = 153/164 (93%), Gaps = 1/164 (0%)
 Strand = Plus / Minus

                                                                       
Query: 157 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 216
           ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826

                                                                       
Query: 217 acgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgtt 276
           |||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatgggg-acgccggtctcgatgtt 767

                                                       
Query: 277 gagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 766 gagctgcgcgagggcgcccttgccggtgatgatctcgccgatga 723
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>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1024

 Score =  208 bits (105), Expect = 8e-51
 Identities = 148/161 (91%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                       
Query: 160 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 219
           ||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||| |
Sbjct: 799 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 740

                                                                       
Query: 220 acgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgag 279
           ||||||||||  ||||||||||| |||||| |||| ||||||||| ||||||||||||||
Sbjct: 739 acgttgaagatgacgagcggctctatctcgttgat-gggcacccccgtctcgatgttgag 681

                                                    
Query: 280 ctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 680 ctgcgccagcgcgcccttccccgtgatgatctcgccgatga 640
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>gb|AY104328.1| Zea mays PCO078649 mRNA sequence
          Length = 1252

 Score =  208 bits (105), Expect = 8e-51
 Identities = 148/161 (91%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                       
Query: 160 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 219
           ||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||| |
Sbjct: 989 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 930

                                                                       
Query: 220 acgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgag 279
           ||||||||||  ||||||||||| |||||| |||| ||||||||| ||||||||||||||
Sbjct: 929 acgttgaagatgacgagcggctctatctcgttgat-gggcacccccgtctcgatgttgag 871

                                                    
Query: 280 ctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 870 ctgcgccagcgcgcccttccccgtgatgatctcgccgatga 830
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>ref|XM_474468.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 747

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                       
Query: 153 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 741 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 682

                                                                       
Query: 213 gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
           ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 681 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 623

                                                           
Query: 273 tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 622 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 575
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                            
Query: 153      gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
                ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 35373095 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 35373036

                                                                            
Query: 213      gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
                ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 35373035 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 35372977

                                                                
Query: 273      tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
                ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 35372976 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 35372929
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>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full
           insert sequence
          Length = 1116

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                       
Query: 153 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 905 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 846

                                                                       
Query: 213 gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
           ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 845 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 787

                                                           
Query: 273 tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 786 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 739
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>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete
            sequence
          Length = 32686

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
            ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 4925 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 4866

                                                                        
Query: 213  gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
            ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 4865 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 4807

                                                            
Query: 273  tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
            ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 4806 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 4759
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>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa
           protein of photosystem II precursor, complete cds
          Length = 1108

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                       
Query: 153 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
           ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 889 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 830

                                                                       
Query: 213 gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
           ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 829 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 771

                                                           
Query: 273 tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
           ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 770 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 723
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score =  190 bits (96), Expect = 2e-45
 Identities = 151/168 (89%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                          
Query: 153    gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 212
              ||||||||  ||| || ||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 168939 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 168880

                                                                          
Query: 213    gaagacgacgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcga 272
              ||||| || ||||||||| | |||||||||||||||| |||||||| || ||||||||||
Sbjct: 168879 gaagaggatgttgaagaggaggagcggctcgatctcgttgatgggg-acgccggtctcga 168821

                                                              
Query: 273    tgttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatga 320
              ||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 168820 tgttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatga 168773
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415A04
          Length = 160669

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                         
Query: 223   ttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgagctg 282
             |||||||| | ||||||||||||||  ||||||||| |  |||||||| |||||||||||
Sbjct: 60404 ttgaagaggatgagcggctcgatctaactgatgggg-atgccggtctcaatgttgagctg 60346

                                    
Query: 283   cgccagcgcgcccttgcccgtga 305
             | |||| ||||||||||| ||||
Sbjct: 60345 ccccagggcgcccttgccggtga 60323
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>ref|NM_190839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1878

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 263  ccggtctcgatgttgagctgcgccagcgcgcccttgcccgtga 305
            |||||||| |||||||||||| |||| ||||||||||| ||||
Sbjct: 1211 ccggtctcaatgttgagctgccccagggcgcccttgccggtga 1169
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>gb|AY836649.1| Uncultured bacterium clone BD8802 pectate lyase gene, complete cds
          Length = 1101

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 278 agctgcgccagcgcgcccttgccc 301
           ||||||||||||||||||||||||
Sbjct: 497 agctgcgccagcgcgcccttgccc 474
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>gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial cds; chloroplast
          Length = 479

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 238 ggctcgatctcgctgatggggcaccccggtctcgatgttgagctgcgccagcgcgccctt 297
           |||||||| ||||||||||| ||| || ||||||||||| | ||| ||||  || |||||
Sbjct: 437 ggctcgatgtcgctgatggg-cacgcctgtctcgatgtttaactgagccaaagcaccctt 379

                                  
Query: 298 gcccgtgatgatctccccgatga 320
            || ||||||| ||| |||||||
Sbjct: 378 cccggtgatgacctctccgatga 356
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
             sequence
          Length = 253151

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 204   gatgaagaagaagacgacgttgaaga 229
             ||||||||||||| ||||||||||||
Sbjct: 10622 gatgaagaagaagtcgacgttgaaga 10597
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>ref|NM_116941.1| Arabidopsis thaliana unknown protein AT4G08710 mRNA, complete cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 206  tgaagaagaagacgacgttga 226
            |||||||||||||||||||||
Sbjct: 1482 tgaagaagaagacgacgttga 1502
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02,
              complete sequence
          Length = 156649

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                          
Query: 220    acgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgag 279
              ||||||||||| ||||||| ||| |||||  ||| |||| |  | |||||||||||||||
Sbjct: 154598 acgttgaagaggacgagcgactcaatctcagtgacgggg-atgctggtctcgatgttgag 154540

                   
Query: 280    ctgcg 284
              |||||
Sbjct: 154539 ctgcg 154535
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>emb|Z48716.1|CEF59B10 Caenorhabditis elegans Cosmid F59B10, complete sequence
          Length = 27428

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 194   tgatggcggcgatgaagaagaagacgacgttga 226
             |||||| ||||||||||||||||| || |||||
Sbjct: 14222 tgatggtggcgatgaagaagaagaagatgttga 14254
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 182     cggtgccggggttgatggcggcgatgaag 210
               |||||||| |||||||||||||| |||||
Sbjct: 2855847 cggtgccgcggttgatggcggcggtgaag 2855819
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>emb|AL161512.2|ATCHRIV24 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 24
          Length = 199362

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    tgaagaagaagacgacgttga 226
              |||||||||||||||||||||
Sbjct: 151365 tgaagaagaagacgacgttga 151385
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>emb|AL161813.1|ATT32A17 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A17 (ESSA project)
          Length = 104386

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   tgaagaagaagacgacgttga 226
             |||||||||||||||||||||
Sbjct: 27093 tgaagaagaagacgacgttga 27113
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                         
Query: 220   acgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgag 279
             ||||||||||| ||||||| ||| |||||  ||| |||| |  | |||||||||||||||
Sbjct: 13474 acgttgaagaggacgagcgactcaatctcagtgacgggg-atgctggtctcgatgttgag 13416

                  
Query: 280   ctgcg 284
             |||||
Sbjct: 13415 ctgcg 13411
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 276     tgagctgcgccagcgcgccct 296
               |||||||||||||||||||||
Sbjct: 3776927 tgagctgcgccagcgcgccct 3776907
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>ref|NM_001027047.1| Caenorhabditis elegans F59B10.4a (F59B10.4) mRNA, complete cds
          Length = 824

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 194 tgatggcggcgatgaagaagaagacgacgttga 226
           |||||| ||||||||||||||||| || |||||
Sbjct: 746 tgatggtggcgatgaagaagaagaagatgttga 714
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>ref|NM_001027048.1| Caenorhabditis elegans F59B10.4b (F59B10.4) mRNA, complete cds
          Length = 1033

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 194 tgatggcggcgatgaagaagaagacgacgttga 226
           |||||| ||||||||||||||||| || |||||
Sbjct: 680 tgatggtggcgatgaagaagaagaagatgttga 648
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     ggcggcgatgaagaagaagacgacg 222
               |||||||| ||||||||||||||||
Sbjct: 1088787 ggcggcgaagaagaagaagacgacg 1088763
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 198      ggcggcgatgaagaagaagacgacg 222
                |||||||| ||||||||||||||||
Sbjct: 24532739 ggcggcgaggaagaagaagacgacg 24532715
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                           
Query: 220     acgttgaagagcacgagcggctcgatctcgctgatggggcaccccggtctcgatgttgag 279
               ||||||||||| ||||||| ||| |||||  ||| |||| |  | |||||||||||||||
Sbjct: 4644131 acgttgaagaggacgagcgactcaatctcagtgacgggg-atgctggtctcgatgttgag 4644073

                    
Query: 280     ctgcg 284
               |||||
Sbjct: 4644072 ctgcg 4644068
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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    acaaacaggcaaagcacgtacgtac 105
             |||||| ||||||||||||||||||
Sbjct: 35805 acaaaccggcaaagcacgtacgtac 35781
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>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 81     acaaacaggcaaagcacgtacgtac 105
              |||||| ||||||||||||||||||
Sbjct: 102729 acaaaccggcaaagcacgtacgtac 102705
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>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0040H10
          Length = 173301

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 198   ggcggcgatgaagaagaagacgacg 222
             |||||||| ||||||||||||||||
Sbjct: 15932 ggcggcgaggaagaagaagacgacg 15908
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0012B02
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 198    ggcggcgatgaagaagaagacgacg 222
              |||||||| ||||||||||||||||
Sbjct: 144212 ggcggcgaggaagaagaagacgacg 144188
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     ggcggcgatgaagaagaagacgacg 222
               |||||||| ||||||||||||||||
Sbjct: 1088787 ggcggcgaagaagaagaagacgacg 1088763
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>emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 97056

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 198   ggcggcgatgaagaagaagacgacg 222
             |||||||| ||||||||||||||||
Sbjct: 84059 ggcggcgaagaagaagaagacgacg 84035
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 198   ggcggcgatgaagaagaagacgacg 222
             |||||||| ||||||||||||||||
Sbjct: 27770 ggcggcgaagaagaagaagacgacg 27746
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>ref|NM_126075.4| Arabidopsis thaliana transcription factor AT5G66770 mRNA, complete
           cds
          Length = 2295

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatgaagaagaagacgacgt 223
           ||||||||||||||||||||
Sbjct: 965 gatgaagaagaagacgacgt 946
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    tggcggcgatgaagaagaagacga 220
              |||||||||||||||||| |||||
Sbjct: 607984 tggcggcgatgaagaagaggacga 607961
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     tcgatgttgagctgcgccag 288
               ||||||||||||||||||||
Sbjct: 5121238 tcgatgttgagctgcgccag 5121219
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>gb|AY772449.1| Rhodococcus equi strain 103+ heat shock protein (htrA) gene, complete
            cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  tgccggggttgatggcggcg 204
            ||||||||||||||||||||
Sbjct: 1151 tgccggggttgatggcggcg 1132
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>ref|XM_953430.1| Neurospora crassa OR74A hypothetical protein (NCU09824.1) partial
            mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  tggcggcgatgaagaagaagacga 220
            |||||||| |||||||||||||||
Sbjct: 1563 tggcggcggtgaagaagaagacga 1586
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>ref|XM_330473.1| Neurospora crassa OR74A hypothetical protein (NCU09824.1) partial
            mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  tggcggcgatgaagaagaagacga 220
            |||||||| |||||||||||||||
Sbjct: 1563 tggcggcggtgaagaagaagacga 1586
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 5243720 tgccggggttgatggcggcg 5243739



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 1734161 tgccggggttgatggcggcg 1734180
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>gb|AC144797.2| Mus musculus BAC clone RP24-349B2 from chromosome 16, complete sequence
          Length = 129045

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    cttcttcttacacctaagta 57
             ||||||||||||||||||||
Sbjct: 36353 cttcttcttacacctaagta 36372
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>ref|XM_656577.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4065.2), mRNA
          Length = 1797

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 cgatgaagaagaagacgacg 222
           ||||||||||||||||||||
Sbjct: 222 cgatgaagaagaagacgacg 241
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>ref|XM_569485.1| Cryptococcus neoformans var. neoformans JEC21 translation
           initiation factor (CNC02150) partial mRNA
          Length = 1613

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 197 tggcggcgatgaagaagaagacga 220
           |||||||||||||||||| |||||
Sbjct: 976 tggcggcgatgaagaagaggacga 999
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>gb|AF043697.2| Caenorhabditis elegans cosmid F56C11, complete sequence
          Length = 41615

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   tgaagaagaagacgacgttg 225
             ||||||||||||||||||||
Sbjct: 12860 tgaagaagaagacgacgttg 12841
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>ref|XM_790314.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor
           3a, subunit 1 (LOC590717), partial mRNA
          Length = 1523

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 cgatgaagaagaagacgacg 222
           ||||||||||||||||||||
Sbjct: 948 cgatgaagaagaagacgacg 967
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    cgccgctgatgaacttgccggtgc 187
              |||||||| |||||||||||||||
Sbjct: 402332 cgccgctggtgaacttgccggtgc 402355
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 177    cttgccggtgccggggttgatggcggcg 204
              |||||||||| |||||||||||| ||||
Sbjct: 122050 cttgccggtggcggggttgatggaggcg 122077
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>emb|AJ318872.1|GGN318872 Gnetum gnemon partial mRNA for putative BEL1-like protein (melbel2
           gene)
          Length = 1295

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 cgatgaagaagaagacgacg 222
           ||||||||||||||||||||
Sbjct: 229 cgatgaagaagaagacgacg 248
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 4044198 tgccggggttgatggcggcg 4044179
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>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete
             sequence
          Length = 98432

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   gaagaagaagacgacgttga 226
             ||||||||||||||||||||
Sbjct: 52631 gaagaagaagacgacgttga 52612
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>gb|AY062538.1| Arabidopsis thaliana SCARECROW gene regulator (At5g66770; MUD21.1)
           mRNA, complete cds
          Length = 2225

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatgaagaagaagacgacgt 223
           ||||||||||||||||||||
Sbjct: 961 gatgaagaagaagacgacgt 942
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>gb|DP000052.1| Sus scrofa target 126 genomic scaffold
          Length = 432382

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      agcctcttgtttttataagg 28
              ||||||||||||||||||||
Sbjct: 218282 agcctcttgtttttataagg 218263
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 3453230 tgccggggttgatggcggcg 3453249
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>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete
           sequence
          Length = 180876

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  cttcttcttacacctaagta 57
           ||||||||||||||||||||
Sbjct: 358 cttcttcttacacctaagta 339
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>dbj|AK035292.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530010N18 product:WDR9 PROTEIN,
           FORM B homolog [Homo sapiens], full insert sequence
          Length = 2511

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  cttcttcttacacctaagta 57
           ||||||||||||||||||||
Sbjct: 679 cttcttcttacacctaagta 660
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>gb|AY150563.1| Aspergillus nidulans SipA3 gene, complete cds
          Length = 6209

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 cgatgaagaagaagacgacg 222
           ||||||||||||||||||||
Sbjct: 792 cgatgaagaagaagacgacg 773
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>emb|BX830446.1|CNS0A04D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB82ZC01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatgaagaagaagacgacgt 223
           ||||||||||||||||||||
Sbjct: 940 gatgaagaagaagacgacgt 921
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>emb|BX832347.1|CNS09ZLX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1983

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatgaagaagaagacgacgt 223
           ||||||||||||||||||||
Sbjct: 964 gatgaagaagaagacgacgt 945
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>gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, complete sequence
          Length = 41337

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ggcgatgaagaagaagacga 220
             ||||||||||||||||||||
Sbjct: 24698 ggcgatgaagaagaagacga 24717
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>gb|AC084449.1|AC084449 Caenorhabditis briggsae cosmid CB021P23, complete sequence
          Length = 90243

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 202   gcgatgaagaagaagacgacgttgaaga 229
             |||| |||||||||||||||| ||||||
Sbjct: 81483 gcgaagaagaagaagacgacgatgaaga 81456
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 2030031 tgccggggttgatggcggcg 2030050
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>gb|BT002580.1| Arabidopsis thaliana SCARECROW gene regulator (At5g66770) mRNA,
           complete cds
          Length = 2019

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gatgaagaagaagacgacgt 223
           ||||||||||||||||||||
Sbjct: 809 gatgaagaagaagacgacgt 790
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>gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decarboxylase-like protein,
             cysteine dioxygenase-like protein, putative histidine
             protein kinase (hpkA), putative serine/threonine protein
             kinase (pknD1), putative histidine protein kinase (espA),
             putative membrane protein (espB), putative
             serine/threonine protein kinase (pknD2), putative serine
             protease DO-like precursor (htrA), and putative response
             regulator genes, complete cds; and unknown genes
          Length = 18424

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tgccggggttgatggcggcg 204
             ||||||||||||||||||||
Sbjct: 16398 tgccggggttgatggcggcg 16417
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     tgccggggttgatggcggcg 204
               ||||||||||||||||||||
Sbjct: 1258181 tgccggggttgatggcggcg 1258200
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>emb|AJ519722.2|YEN519722 Yersinia enterocolitica partial cryptic plasmid p29930
          Length = 40303

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tgccggggttgatggcggcg 204
             ||||||||||||||||||||
Sbjct: 37562 tgccggggttgatggcggcg 37581
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  gatgaagaagaagacgacgt 223
            ||||||||||||||||||||
Sbjct: 4042 gatgaagaagaagacgacgt 4023
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>emb|AJ347753.1|BCE347753 Burkholderia cepacia bcrA gene for multidrug efflux protein
          Length = 1657

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  gagctgcgccagcgcgccct 296
            ||||||||||||||||||||
Sbjct: 1483 gagctgcgccagcgcgccct 1464
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>ref|XM_310477.2| Anopheles gambiae str. PEST ENSANGP00000019255
           (ENSANGG00000016766), partial mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 gcggctcgatctcgctgatg 255
           ||||||||||||||||||||
Sbjct: 301 gcggctcgatctcgctgatg 282
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 201     ggcgatgaagaagaagacga 220
               ||||||||||||||||||||
Sbjct: 1544717 ggcgatgaagaagaagacga 1544736



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    gcgcgtgccggtgccgatct 151
              ||||||||||||||||||||
Sbjct: 452195 gcgcgtgccggtgccgatct 452176
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    tgccggggttgatggcggcg 204
              ||||||||||||||||||||
Sbjct: 935443 tgccggggttgatggcggcg 935462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,084,508
Number of Sequences: 3902068
Number of extensions: 3084508
Number of successful extensions: 73849
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72709
Number of HSP's gapped (non-prelim): 1123
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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