ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11e13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 517 bits (261), Expect = e-143 Identities = 357/389 (91%) Strand = Plus / Minus Query: 158 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 217 ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 799 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 740 Query: 218 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 277 |||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 739 acgttgaagatgacgagcggctctatctcgttgatgggcacccccgtctcgatgttgagc 680 Query: 278 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatccccagc 337 ||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||| Sbjct: 679 tgcgccagcgcgcccttccccgtgatgatctcgccgatgatggagaaggccacgcccagc 620 Query: 338 tgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacctccc 397 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 619 tgcgccatccgccccacgaacagctcgttcgacttggtgaacccgaacagcggccctccc 560 Query: 398 tcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcgagg 457 ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct: 559 tcgctgaggccgagggcgccgcggaagcccttgccgggttggatgacggccttgtcgagg 500 Query: 458 ccggtgggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcgccgagg 517 |||||| || |||||||||||| | ||||||||||||||| |||||||||||||| ||| Sbjct: 499 ccggtgacctcctcgtcgacgaagcggccgcggtctccgagagcgccgatggcgccaagg 440 Query: 518 agggtgaagaggatgaagaagaggaggag 546 |||||||||||||||||||| |||||||| Sbjct: 439 agggtgaagaggatgaagaacaggaggag 411
>ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 741 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 740 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 681 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 680 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 621 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 620 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 561 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 560 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 501 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 500 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 441 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 440 ccgaggagggtgaagaggatgaagaagaggaggag 406 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 293 cgcccgacgaacagctcgttctccttggtgaaaccga 257
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37692662 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 37692603 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 37692602 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 37692543 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 37692542 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 37692483 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 37692482 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 37692423 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 37692422 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 37692363 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 37692362 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 37692303 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 37692302 ccgaggagggtgaagaggatgaagaagaggaggag 37692268 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 221 ttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagctgc 280 |||||||| | |||||||||||||| |||||||| | |||||||| |||||||||||| Sbjct: 33384238 ttgaagaggatgagcggctcgatctaactgatggggatgccggtctcaatgttgagctgc 33384179 Query: 281 gccagcgcgcccttgcccgtga 302 |||| ||||||||||| |||| Sbjct: 33384178 cccagggcgcccttgccggtga 33384157 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 37690776 cgcccgacgaacagctcgttctccttggtgaaaccga 37690740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 acaaacaggcaaagcacgtacgtac 103 |||||| |||||||||||||||||| Sbjct: 29256942 acaaaccggcaaagcacgtacgtac 29256918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 7516458 gaggatgaagaagaggaggag 7516478
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153136 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 153077 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 153076 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 153017 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 153016 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 152957 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 152956 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 152897 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 152896 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 152837 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 152836 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 152777 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 152776 ccgaggagggtgaagaggatgaagaagaggaggag 152742 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 151250 cgcccgacgaacagctcgttctccttggtgaaaccga 151214
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20963 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 20904 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 20903 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 20844 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 20843 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 20784 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 20783 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 20724 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 20723 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 20664 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 20663 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 20604 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 20603 ccgaggagggtgaagaggatgaagaagaggaggag 20569 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 19077 cgcccgacgaacagctcgttctccttggtgaaaccga 19041
>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full insert sequence Length = 1055 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 766 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 765 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 706 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 705 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 646 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 645 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 586 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 585 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 526 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 525 ccgaggagggtgaagaggatgaagaagaggaggag 491 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 378 cgcccgacgaacagctcgttctccttggtgaaaccga 342
>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full insert sequence Length = 1057 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 829 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 828 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 769 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 768 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 709 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 708 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 649 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 648 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 589 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 588 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 529 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 528 ccgaggagggtgaagaggatgaagaagaggaggag 494 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 381 cgcccgacgaacagctcgttctccttggtgaaaccga 345
>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full insert sequence Length = 1064 Score = 509 bits (257), Expect = e-141 Identities = 361/395 (91%), Gaps = 3/395 (0%) Strand = Plus / Minus Query: 155 tcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaag 214 ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 tcgtcgtcgtcgctgacgaacttgccggtgccggggttgatggcggcgatgaagaagaag 826 Query: 215 acgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttg 274 |||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||| Sbjct: 825 acgacgttgaagaggacgagcggctcgatctcgttgatggggacgccggtctcgatgttg 766 Query: 275 agctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatcccc 334 |||||||| || ||||||||||| ||||||||||| |||||||||||||||||||| || Sbjct: 765 agctgcgcgagggcgcccttgccggtgatgatctcgccgatgatggagaaggcgatgccg 706 Query: 335 agctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacct 394 |||||||| ||||| || |||||||||||||| | ||||||||| ||||||||||| || Sbjct: 705 agctgcgcgagccggccgacgaacagctcgttggccttggtgaagccgaacagcgggccg 646 Query: 395 ccctcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcg 454 |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 645 ccctcgctgaggcccagcgcggagcggaagcccttgcccggggcgatgacggccttgtcg 586 Query: 455 aggccggt---gggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcg 511 ||||| || ||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 585 aggcccgtcaccggctggtcgtcgacgaagctgccgcggtcgccgagcgcgccgatggcg 526 Query: 512 ccgaggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||||||||||||||||||| Sbjct: 525 ccgaggagggtgaagaggatgaagaagaggaggag 491 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 347 cgccccacgaacagctcgttcgacttggtgaacccga 383 ||||| ||||||||||||||| ||||||||| |||| Sbjct: 378 cgcccgacgaacagctcgttctccttggtgaaaccga 342
>gb|AY104328.1| Zea mays PCO078649 mRNA sequence Length = 1252 Score = 509 bits (257), Expect = e-141 Identities = 356/389 (91%) Strand = Plus / Minus Query: 158 tcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaagaagacg 217 ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 989 tcctcgccgatgatgaacctgccattgccggggttgatggcggcgatgaagaagaagagg 930 Query: 218 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 277 |||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 929 acgttgaagatgacgagcggctctatctcgttgatgggcacccccgtctcgatgttgagc 870 Query: 278 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgatccccagc 337 ||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||| Sbjct: 869 tgcgccagcgcgcccttccccgtgatgatctcgccgatgatggagaaggccacgcccagc 810 Query: 338 tgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcggacctccc 397 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 809 tgcgccatccgccccacgaacagctcgttcgacttggtgaacccgaacagcggccctccc 750 Query: 398 tcgctgaggccgagggctgagcggaagcctttgccgggggcgatgacggccttgtcgagg 457 ||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct: 749 tcgctgaggccgagggcgccgcggaagcccttgccgggttggatgacggccttgtcgagg 690 Query: 458 ccggtgggctgctcgtcgacgaacctgccgcggtctccgagcgcgccgatggcgccgagg 517 |||||| || |||||||||||| | ||||||||| ||||| |||||||||||||| ||| Sbjct: 689 ccggtgacctcctcgtcgacgaagcggccgcggtccccgagagcgccgatggcgccaagg 630 Query: 518 agggtgaagaggatgaagaagaggaggag 546 |||||||||||||||||||| |||||||| Sbjct: 629 agggtgaagaggatgaagaacaggaggag 601
>ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 741 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 682 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 681 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 622 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 621 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 562 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 |||||||||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 561 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 502 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 501 gccaccctcgctgag 487 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 407 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 352 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 ||||||||||||||||||| |||||||||||||| Sbjct: 234 ccccacgaacagctcgttctccttggtgaacccga 200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 35373095 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 35373036 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 35373035 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 35372976 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 35372975 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 35372916 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 |||||||||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 35372915 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 35372856 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 35372855 gccaccctcgctgag 35372841 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 35372761 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 35372706 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 ||||||||||||||||||| |||||||||||||| Sbjct: 35372588 ccccacgaacagctcgttctccttggtgaacccga 35372554
>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full insert sequence Length = 1116 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 905 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 846 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 845 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 786 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 785 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 726 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 |||||||||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 725 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 666 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 665 gccaccctcgctgag 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 571 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 516 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 ||||||||||||||||||| |||||||||||||| Sbjct: 398 ccccacgaacagctcgttctccttggtgaacccga 364
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 4925 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 4866 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 4865 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 4806 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 4805 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 4746 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 |||||||||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 4745 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 4686 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 4685 gccaccctcgctgag 4671 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 4591 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 4536 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 |||||||||||| |||||| |||||||||||||| Sbjct: 4418 ccccacgaacagttcgttctccttggtgaacccga 4384
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 168939 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 168880 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 168879 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 168820 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 168819 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 168760 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 |||||||||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 168759 ccccagctgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 168700 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 168699 gccaccctcgctgag 168685 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 168605 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 168550 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 ||||||||||||||||||| |||||||||||||| Sbjct: 168432 ccccacgaacagctcgttctccttggtgaacccga 168398
>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa protein of photosystem II precursor, complete cds Length = 1108 Score = 291 bits (147), Expect = 1e-75 Identities = 228/255 (89%) Strand = Plus / Minus Query: 151 gtcgtcgtcctcgccgctgatgaacttgccggtgccggggttgatggcggcgatgaagaa 210 |||||||| ||| || ||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 889 gtcgtcgttgtcgtcggtgacgaacttgccggttccggggttgatggcggcgaagaagaa 830 Query: 211 gaagacgacgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgat 270 ||||| || ||||||||| | |||||||||||||||| ||||||| || ||||||||||| Sbjct: 829 gaagaggatgttgaagaggaggagcggctcgatctcgttgatggggacgccggtctcgat 770 Query: 271 gttgagctgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 769 gttgagctgcgccagcgcgcccttcccggtgatgatctcgccgatgagggagaaggcgat 710 Query: 331 ccccagctgcgccagccgccccacgaacagctcgttcgacttggtgaacccgaacagcgg 390 ||||| ||||| || || |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 709 ccccacgtgcgcgaggcgacccacgaagagctcgttcgccttggtgaacccgaacagcgg 650 Query: 391 acctccctcgctgag 405 || ||||||||||| Sbjct: 649 gccaccctcgctgag 635 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 488 cggtctccgagcgcgccgatggcgccgaggagggtgaagaggatgaagaagaggag 543 ||||| || ||||||||||||||||| || || ||||||||||||||||||||||| Sbjct: 555 cggtcgcccagcgcgccgatggcgcccagcagcgtgaagaggatgaagaagaggag 500 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 ccccacgaacagctcgttcgacttggtgaacccga 383 ||||||||||||||||||| |||||||||||||| Sbjct: 382 ccccacgaacagctcgttctccttggtgaacccga 348
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 221 ttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagctgc 280 |||||||| | |||||||||||||| |||||||| | |||||||| |||||||||||| Sbjct: 60404 ttgaagaggatgagcggctcgatctaactgatggggatgccggtctcaatgttgagctgc 60345 Query: 281 gccagcgcgcccttgcccgtga 302 |||| ||||||||||| |||| Sbjct: 60344 cccagggcgcccttgccggtga 60323
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 218 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 277 ||||||||||| ||||||| ||| ||||| ||| ||| | | |||||||||||||||| Sbjct: 154598 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 154539 Query: 278 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||| || || ||||||| |||| |||||| | |||||||||||||||||| Sbjct: 154538 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 154486 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 506 atggcgccgaggagggtgaagaggatgaagaagaggaggag 546 |||| ||||||||||||||||||| |||| ||||||||||| Sbjct: 154427 atggtgccgaggagggtgaagaggttgaacaagaggaggag 154387 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ggcgatgacggccttgtcgaggcc 459 |||||||||||||||||||||||| Sbjct: 154491 ggcgatgacggccttgtcgaggcc 154468
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 218 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 277 ||||||||||| ||||||| ||| ||||| ||| ||| | | |||||||||||||||| Sbjct: 13474 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 13415 Query: 278 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||| || || ||||||| |||| |||||| | |||||||||||||||||| Sbjct: 13414 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 13362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 506 atggcgccgaggagggtgaagaggatgaagaagaggaggag 546 |||| ||||||||||||||||||| |||| ||||||||||| Sbjct: 13303 atggtgccgaggagggtgaagaggttgaacaagaggaggag 13263 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ggcgatgacggccttgtcgaggcc 459 |||||||||||||||||||||||| Sbjct: 13367 ggcgatgacggccttgtcgaggcc 13344
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 218 acgttgaagagcacgagcggctcgatctcgctgatgggcaccccggtctcgatgttgagc 277 ||||||||||| ||||||| ||| ||||| ||| ||| | | |||||||||||||||| Sbjct: 4644131 acgttgaagaggacgagcgactcaatctcagtgacggggatgctggtctcgatgttgagc 4644072 Query: 278 tgcgccagcgcgcccttgcccgtgatgatctccccgatgatggagaaggcgat 330 |||| || || ||||||| |||| |||||| | |||||||||||||||||| Sbjct: 4644071 tgcgtgagggcaaccttgccggtgacgatctcgctgatgatggagaaggcgat 4644019 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 506 atggcgccgaggagggtgaagaggatgaagaagaggaggag 546 |||| ||||||||||||||||||| |||| ||||||||||| Sbjct: 4643960 atggtgccgaggagggtgaagaggttgaacaagaggaggag 4643920 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ggcgatgacggccttgtcgaggcc 459 |||||||||||||||||||||||| Sbjct: 4644024 ggcgatgacggccttgtcgaggcc 4644001
>gb|DQ067929.1| Xerophyta humilis PSII subunit PsbS mRNA, partial cds; chloroplast Length = 479 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 236 ggctcgatctcgctgatgggcaccccggtctcgatgttgagctgcgccagcgcgcccttg 295 |||||||| |||||||||||||| || ||||||||||| | ||| |||| || ||||| Sbjct: 437 ggctcgatgtcgctgatgggcacgcctgtctcgatgtttaactgagccaaagcacccttc 378 Query: 296 cccgtgatgatctccccgatgatggagaaggcgatccccagctgcgccagccgccccacg 355 || ||||||| ||| ||||||| ||||| || || || || ||||| || || |||||| Sbjct: 377 ccggtgatgacctctccgatgagtgagaacgcaataccgagttgcgctagtcgtcccacg 318 Query: 356 aacagctcgtt 366 || |||||||| Sbjct: 317 aagagctcgtt 307 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 gtgaagaggatgaagaagaggaggag 546 ||||||||||||||||| |||||||| Sbjct: 146 gtgaagaggatgaagaaaaggaggag 121
>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence Length = 161504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||||||||||||||| Sbjct: 38520 gaggaggatgaagaggatgaagaagaggagga 38489
>ref|XM_987483.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC671507), mRNA Length = 1254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||||||||||||||| Sbjct: 670 gaggaggatgaagaggatgaagaagaggagga 701
>ref|XM_986380.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC666836), mRNA Length = 1254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||||||||||||||| Sbjct: 670 gaggaggatgaagaggatgaagaagaggagga 701
>ref|NM_190839.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1878 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 260 ccggtctcgatgttgagctgcgccagcgcgcccttgcccgtga 302 |||||||| |||||||||||| |||| ||||||||||| |||| Sbjct: 1211 ccggtctcaatgttgagctgccccagggcgcccttgccggtga 1169
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||| ||||||||||||||||||||||||| Sbjct: 41813 gaggatgaagaggatgaagaagaggaggag 41784
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||||||||| ||||||||||||||| Sbjct: 960764 gagggtgaagaggaggaagaagaggaggag 960793
>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4, complete sequence Length = 92140 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 ||||||| |||||||||||||||||||||| Sbjct: 41953 gaggaggatgaagaggatgaagaagaggag 41924
>gb|BC081839.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93599 IMAGE:7132958), complete cds Length = 2256 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 627 cgaggaggatgaagaggatgaggaagaggagga 659
>gb|BC061779.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:72533 IMAGE:5623285), complete cds Length = 1214 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 615 cgaggaggatgaagaggatgaggaagaggagga 647
>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence Length = 172853 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 97070 cgaggaggatgaagaggatgaggaagaggagga 97038
>emb|AL450463.20| Human DNA sequence from clone RP13-299C14 on chromosome 20, complete sequence Length = 27854 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||||||| ||||||||||||||| Sbjct: 27195 gaggagggggaagaggaggaagaagaggaggag 27163
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||| |||||||| |||||||||||||||||| Sbjct: 1251125 gaggacggtgaagaagatgaagaagaggaggag 1251093
>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence Length = 173042 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 124387 cgaggaggatgaagaggatgaggaagaggagga 124355
>emb|X00271.1|RNGCRY Rat gene for lens gamma-crystallin (gamma 3-1) Length = 3425 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||||||| ||||||||||||||| Sbjct: 1505 gaggagggagaagaggaggaagaagaggaggag 1473
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| ||| ||||||||||||||||||||| Sbjct: 228794 gaggaggatgatgaggatgaagaagaggaggag 228826 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggagga 545 |||||||||||||||||||| Sbjct: 233392 gaggatgaagaagaggagga 233411
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||||||||||| ||||||||| |||||| Sbjct: 105214 gaggagggtgaagagggtgaagaagatgaggag 105182 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||||||||||| ||||||||| |||||| Sbjct: 105172 gaggagggtgaagagggtgaagaagatgaggag 105140 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||||||||||| ||||||||| |||||| Sbjct: 105130 gaggagggtgaagagggtgaagaagatgaggag 105098 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 aggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||| ||||||||| |||||| Sbjct: 105339 aggagggtgaagagggtgaagaagatgaggag 105308 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 515 aggagggtgaagaggatgaagaagaggaggag 546 ||||||||||||||| ||||||||| |||||| Sbjct: 105297 aggagggtgaagagggtgaagaagatgaggag 105266 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 ||||||||||||| ||||||||| |||||| Sbjct: 105253 gagggtgaagagggtgaagaagatgaggag 105224
>ref|XM_573095.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC497907), mRNA Length = 1297 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 690 cgaggaggatgaagaggatgaggaagaggagga 722
>ref|XM_575891.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC500530), mRNA Length = 1226 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 693 cgaggaggatgaagaggatgaggaagaggagga 725
>ref|XM_345376.2| PREDICTED: Rattus norvegicus similar to putative protein kinase (LOC366086), mRNA Length = 1410 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 1335 cgaggaggatgaagaggatgaggaagaggagga 1367
>ref|XM_574476.1| PREDICTED: Rattus norvegicus similar to Hmgb1 protein (LOC499183), mRNA Length = 2295 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 702 cgaggaggatgaagaggatgaggaagaggagga 734
>ref|XM_574383.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC499092), mRNA Length = 1269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 671 cgaggaggatgaagaggatgaggaagaggagga 703
>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence Length = 166967 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 155782 cgaggaggatgaagaggatgaggaagaggagga 155814
>gb|AF275734.1|AF275734 Rattus norvegicus amphoterin mRNA, complete cds Length = 1245 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 659 cgaggaggatgaagaggatgaggaagaggagga 691
>ref|NG_005431.1| Mus musculus high mobility group protein 1-like (LOC433238) pseudogene on chromosome 19 Length = 1463 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 789 cgaggaggatgaagaggatgaggaagaggagga 821
>emb|Y00463.1|RNHMG1 Rat mRNA for high mobility group protein HMG1 Length = 825 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 597 cgaggaggatgaagaggatgaggaagaggagga 629
>gb|BC088402.1| Rattus norvegicus high mobility group box 1, mRNA (cDNA clone MGC:93598 IMAGE:7128547), complete cds Length = 1361 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 703 cgaggaggatgaagaggatgaggaagaggagga 735
>ref|NM_012963.2| Rattus norvegicus high mobility group box 1 (Hmgb1), mRNA Length = 2256 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 627 cgaggaggatgaagaggatgaggaagaggagga 659
>gb|M63852.1|SYNHMG1 Rat high mobility group 1 protein synthetic gene, complete cds Length = 924 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 658 cgaggaggatgaagaggatgaggaagaggagga 690
>gb|M19359.1|RATCRYG Rat gamma-crystallin gene cluster, encoding gamma-A (gamma 1-1), gamma-B (gamma 1-2), gamma-C (gamma 2-1), gamma-D (gamma 2-2), and gamma-E (gamma 3-1) crystallins, complete cds Length = 54670 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||||||| ||||||||||||||| Sbjct: 48731 gaggagggagaagaggaggaagaagaggaggag 48699
>gb|M64986.1|RATAMPHO Rat amphoterin mRNA, complete cds Length = 1225 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||||||| ||||||||||| Sbjct: 692 cgaggaggatgaagaggatgaggaagaggagga 724
>ref|XM_633380.1| Dictyostelium discoideum hypothetical protein (DDB0186138), partial mRNA Length = 1221 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 522 tgaagaggatgaagaagaggagga 545 |||||||||||||||||||||||| Sbjct: 1149 tgaagaggatgaagaagaggagga 1172
>ref|XM_641716.1| Dictyostelium discoideum nucleomorphin (DDB0231257), partial mRNA Length = 1023 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 406 gaagaggatgaagaagaggaggag 429
>gb|AC107704.8| Mus musculus chromosome 7, clone RP24-121L4, complete sequence Length = 194458 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 16763 gaggaggatgaagaggatgaggaagaggagga 16794
>gb|BC083067.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103168 IMAGE:5372544), complete cds Length = 1252 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 646 gaggaggatgaagaggatgaggaagaggagga 677
>gb|BC085090.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103169 IMAGE:6485915), complete cds Length = 1283 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 679 gaggaggatgaagaggatgaggaagaggagga 710
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence Length = 220916 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||| |||||||||||||| Sbjct: 188765 gaggagggggaagaggaggaagaagaggagga 188734
>gb|AC136923.6| Mus musculus chromosome 18, clone RP24-331G12, complete sequence Length = 177390 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||| |||||||||||||| Sbjct: 8512 gaggagggggaagaggacgaagaagaggagga 8481
>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence Length = 165774 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 108592 gaggaggatgaagaggatgaggaagaggagga 108561
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence Length = 136224 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||||||||||| Sbjct: 14604 gaggaggaagaagaggatgaagaagaggagga 14635
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 134327 gaggaggatgaagaggatgaggaagaggagga 134358
>ref|NM_010439.2| Mus musculus high mobility group box 1 (Hmgb1), mRNA Length = 2309 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 724 gaggaggatgaagaggatgaggaagaggagga 755
>gb|AC120006.12| Mus musculus chromosome 19, clone RP24-176M2, complete sequence Length = 181007 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 160485 gaggaggatgaagaggatgaggaagaggagga 160454
>ref|NG_005439.2| Mus musculus high mobility group protein 1-like (LOC629372) pseudogene on chromosome 19 Length = 1439 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 773 gaggaggatgaagaggatgaggaagaggagga 804
>ref|NG_005430.2| Mus musculus high mobility group box 1 (Hmgb1) pseudogene (LOC654442) on chromosome 11 Length = 836 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 668 gaggaggatgaagaggatgaggaagaggagga 699
>gb|AC135509.2| Mus musculus BAC clone RP24-448I12 from chromosome 17, complete sequence Length = 141307 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 130445 gaggaggatgaagaggatgaggaagaggagga 130414
>gb|AF140042.2| Dictyostelium discoideum putative calmodulin-binding protein CaM-BP38 mRNA, complete cds Length = 1557 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 892 gaagaggatgaagaagaggaggag 915
>ref|NM_020090.1| Rattus norvegicus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 3550 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||| |||||||| Sbjct: 2864 gaggaggatgaagaggatgaagaggaggagga 2895
>ref|XM_451900.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B08305g predicted mRNA Length = 2208 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||||||||||| Sbjct: 1492 gaggaggaagaagaggatgaagaagaggagga 1523
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 23785 gaagaggatgaagaagaggaggag 23762 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 227092 gaggaggaagaagaggaggaagaagaggaggag 227060
>ref|XM_001005031.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC677578), mRNA Length = 1451 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 679 gaggaggatgaagaggatgaggaagaggagga 710
>ref|XM_982299.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 511 gaggaggatgaagaggatgaggaagaggagga 542
>ref|XM_358238.5| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 567 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 508 gaggaggatgaagaggatgaggaagaggagga 539
>ref|XM_910188.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC385454), mRNA Length = 567 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 508 gaggaggatgaagaggatgaggaagaggagga 539
>ref|XR_003222.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC640060), mRNA Length = 1293 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 722 gaggaggatgaagaggatgaggaagaggagga 753
>ref|XM_884320.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619937), mRNA Length = 1267 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 677 gaggaggatgaagaggatgaggaagaggagga 708
>ref|XM_914398.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC638385), mRNA Length = 1260 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 670 gaggaggatgaagaggatgaggaagaggagga 701
>ref|XM_977875.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC669902), mRNA Length = 1269 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 678 gaggaggatgaagaggatgaggaagaggagga 709
>ref|XM_976550.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC669692), mRNA Length = 2060 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 679 gaggaggatgaagaggatgaggaagaggagga 710
>ref|XR_003080.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| | |||||||||||||||||||||| Sbjct: 573 gaggaggataaagaggatgaagaagaggagga 604
>ref|XR_004825.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC619909), mRNA Length = 635 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| | |||||||||||||||||||||| Sbjct: 573 gaggaggataaagaggatgaagaagaggagga 604
>ref|XR_003871.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC623634), mRNA Length = 835 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 758 gaggaggatgaagaggatgaggaagaggagga 789
>gb|BC064790.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:76709 IMAGE:30019980), complete cds Length = 1612 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 1008 gaggaggatgaagaggatgaggaagaggagga 1039
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 24529 gaagaggatgaagaagaggaggag 24506
>ref|XM_380871.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00695.1) partial mRNA Length = 1965 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 1642 gaagaggatgaagaagaggaggag 1665
>gb|AC129590.4| Mus musculus BAC clone RP24-428B12 from chromosome 14, complete sequence Length = 180177 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 42128 gaagaggatgaagaagaggaggag 42151
>gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome 19, complete sequence Length = 171122 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 87993 gaggaggatgaagaggatgaggaagaggagga 88024
>gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complete sequence Length = 211208 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 25182 gaggaggatgaagaggatgaggaagaggagga 25213
>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9, complete sequence Length = 103882 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagagg 541 ||||||||||||||||| |||||||||| Sbjct: 29589 gaggagggtgaagaggaagaagaagagg 29616
>ref|XM_719825.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04596) partial mRNA Length = 3090 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||| ||||||||||||||||| Sbjct: 1795 gaggaggatgaagaagatgaagaagaggagga 1826
>emb|CR674345.2|CNS0FJAN Tetraodon nigroviridis full-length cDNA Length = 1153 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||||||||| ||||| ||||||||||| Sbjct: 562 gaggagggtgaagaagatgaggaagaggagga 593
>gb|AC158764.4| Mus musculus chromosome 1, clone RP24-248C2, complete sequence Length = 165228 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 74982 gaggaggatgaagaggatgaggaagaggagga 74951
>gb|AC161211.21| Mus musculus chromosome 7, clone RP23-74O12, complete sequence Length = 188863 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 176343 gaggaggatgaagaggatgaggaagaggagga 176374
>gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, complete sequence Length = 193682 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||| |||||||||||||| Sbjct: 68100 gaggagggggaagaggaggaagaagaggagga 68069
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||||||||||| Sbjct: 739458 gaggaggaagaagaggatgaagaagaggagga 739489
>emb|AL603889.5| Mouse DNA sequence from clone RP23-407M20 on chromosome 11, complete sequence Length = 145052 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 24882 gaggaggatgaagaggatgaggaagaggagga 24851
>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224664 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 154873 gaggaggatgaagaggatgaggaagaggagga 154842 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||||| ||||||||||||| Sbjct: 198648 gaggaggaggaagaggatgcagaagaggaggag 198616
>gb|AC153153.4| Mus musculus BAC clone RP23-79G18 from chromosome 13, complete sequence Length = 222383 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 217074 gaggaggatgaagaggatgaggaagaggagga 217043 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||| ||||||||||||||| Sbjct: 140399 gaagaggaggaagaagaggaggag 140376
>emb|AL954336.3| Mouse DNA sequence from clone RP23-223H19 on chromosome 11 Contains a high mobility group box 1 (Hmgb1) pseudogene, a novel gene and two CpG islands, complete sequence Length = 117391 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 35800 gaggaggatgaagaggatgaggaagaggagga 35831
>gb|BC006586.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:8044 IMAGE:3587109), complete cds Length = 1266 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 660 gaggaggatgaagaggatgaggaagaggagga 691
>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete sequence Length = 198624 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 67936 gaggaggatgaagaggatgaggaagaggagga 67905 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||||| ||||||||||||| Sbjct: 111709 gaggaggaggaagaggatgcagaagaggaggag 111677
>gb|BC008565.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:8033 IMAGE:3586745), complete cds Length = 2333 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 698 gaggaggatgaagaggatgaggaagaggagga 729
>dbj|AK144428.1| Mus musculus 21 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:G630066L18 product:high mobility group box 1, full insert sequence Length = 2816 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 699 gaggaggatgaagaggatgaggaagaggagga 730
>dbj|AK146420.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730085H08 product:high mobility group box 1, full insert sequence Length = 2252 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 669 gaggaggatgaagaggatgaggaagaggagga 700
>dbj|AK134228.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830495F02 product:high mobility group box 1, full insert sequence Length = 1047 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 461 gaggaggatgaagaggatgaggaagaggagga 492
>dbj|AK150924.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018F21 product:high mobility group box 1, full insert sequence Length = 1316 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 727 gaggaggatgaagaggatgaggaagaggagga 758
>dbj|AK157846.1| Mus musculus erythroblast cDNA, RIKEN full-length enriched library, clone:K0C0023A12 product:high mobility group box 1, full insert sequence Length = 2309 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 724 gaggaggatgaagaggatgaggaagaggagga 755
>dbj|AK166007.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730029D20 product:high mobility group box 1, full insert sequence Length = 1264 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 678 gaggaggatgaagaggatgaggaagaggagga 709
>dbj|AK084841.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330050N16 product:high mobility group box 1, full insert sequence Length = 2309 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 724 gaggaggatgaagaggatgaggaagaggagga 755
>dbj|AK051800.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130095O09 product:high mobility group box 1, full insert sequence Length = 1235 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 649 gaggaggatgaagaggatgaggaagaggagga 680
>dbj|AK087949.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430001G07 product:high mobility group box 1, full insert sequence Length = 1274 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 692 gaggaggatgaagaggatgaggaagaggagga 723
>dbj|AK037928.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130064K11 product:high mobility group box 1, full insert sequence Length = 928 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 758 gaggaggatgaagaggatgaggaagaggagga 789
>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence Length = 228458 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 207732 gaggaggatgaagaggatgaggaagaggagga 207701
>dbj|AK033880.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330109A19 product:unclassifiable, full insert sequence Length = 3445 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 1374 gaggaggatgaagaggatgaggaagaggagga 1343
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 143758 gaggaggatgaagaggatgaggaagaggagga 143727
>gb|AC121140.7| Mus musculus chromosome 8, clone RP23-429G12, complete sequence Length = 201440 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 170540 gaggaggatgaagaggatgaggaagaggagga 170509
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||||||||||| Sbjct: 19134 gaggaggaagaagaggatgaagaagaggagga 19103
>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence Length = 199782 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||| |||||||||||||| Sbjct: 128679 gaggagggggaagaggaggaagaagaggagga 128648
>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete sequence Length = 132103 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 8795 gaggaggatgaagaggatgaggaagaggagga 8764
>gb|AF176688.1|AF176688 Rattus norvegicus sodium/calcium/potassium exchanger NCKX1 (SLC24A1) mRNA, complete cds Length = 3550 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||| |||||||| Sbjct: 2864 gaggaggatgaagaggatgaagaggaggagga 2895
>gb|AC131177.9| Mus musculus chromosome 1, clone RP23-374I10, complete sequence Length = 189761 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 137039 gaggaggatgaagaggatgaggaagaggagga 137008
>gb|BC091741.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103167 IMAGE:4987137), complete cds Length = 867 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 683 gaggaggatgaagaggatgaggaagaggagga 714
>emb|AL831780.12| Mouse DNA sequence from clone RP23-394B8 on chromosome 2, complete sequence Length = 173444 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 69824 gaggaggatgaagaggatgaggaagaggagga 69793
>gb|AY631855.1| Dictyostelium discoideum nucleomorphin B (numB) mRNA, complete cds Length = 2318 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 1654 gaagaggatgaagaagaggaggag 1677
>gb|AY836649.1| Uncultured bacterium clone BD8802 pectate lyase gene, complete cds Length = 1101 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 275 agctgcgccagcgcgcccttgccc 298 |||||||||||||||||||||||| Sbjct: 497 agctgcgccagcgcgcccttgccc 474
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| | |||||||||||||||||||||| Sbjct: 183521 gaggaggataaagaggatgaagaagaggagga 183490
>emb|Y00365.1|CHHMG1 Chinese hamster HMG-1 gene for high mobility group protein 1 Length = 2058 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 466 gaggaggatgaagaggatgaggaagaggagga 497
>emb|X80457.1|MMHMG1 M.musculus HMG1 gene Length = 2547 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 2099 gaggaggatgaagaggatgaggaagaggagga 2130
>gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds Length = 1845 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| || ||||||||||||||||||||| Sbjct: 871 gaggaggatggagaggatgaagaagaggagga 902 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 1224 agaggatgaagaagaggaggag 1245 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 1152 agaggatgaagaagaggaggag 1173 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 1128 agaggatgaagaagaggaggag 1149 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 930 agaggatgaagaagaggaggag 951 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggagga 545 ||||||||||||||||||||| Sbjct: 1176 agaggatgaagaagaggagga 1196 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||| || ||||||||||||||||| Sbjct: 1462 gaggaggatgaggatgatgaagaagaggagga 1493 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| || || ||||||||||||||||| Sbjct: 1438 gaggagggagaggatgatgaagaagaggagga 1469
>gb|BC111468.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117896 IMAGE:4215684), complete cds Length = 2258 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 649 gaggaggatgaagaggatgaggaagaggagga 680
>gb|BC110667.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117897 IMAGE:5036554), complete cds Length = 1731 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 1135 gaggaggatgaagaggatgaggaagaggagga 1166
>gb|BC100312.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:117529 IMAGE:30849071), complete cds Length = 1325 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 701 gaggaggatgaagaggatgaggaagaggagga 732
>gb|BC094030.1| Mus musculus high mobility group box 1, mRNA (cDNA clone MGC:103166 IMAGE:4952464), complete cds Length = 1346 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 713 gaggaggatgaagaggatgaggaagaggagga 744
>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence Length = 241046 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 181104 gaagaggatgaagaagaggaggag 181081
>gb|AC112266.6| Mus musculus BAC clone RP23-422B6 from 13, complete sequence Length = 190943 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 161479 gaggaggatgaagaggatgaggaagaggagga 161448 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||| ||||||||||||||| Sbjct: 84804 gaagaggaggaagaagaggaggag 84781
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||||||||||||||||| Sbjct: 155188 gaggaggaagaagaggatgaagaagaggagga 155157
>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence Length = 221010 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 |||||||| |||||||| |||||||||||||| Sbjct: 95204 gaggagggggaagaggaggaagaagaggagga 95173
>emb|AL845504.8| Mouse DNA sequence from clone RP23-297M18 on chromosome 2, complete sequence Length = 160295 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 81345 gaggaggatgaagaggatgaggaagaggagga 81314
>emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on chromosome X, complete sequence Length = 177087 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 32115 gaggaggatgaagaggatgaggaagaggagga 32084
>gb|L38477.1|MUSHMG1HOM Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1) mRNA, complete cds Length = 1225 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 644 gaggaggatgaagaggatgaggaagaggagga 675
>emb|Z11997.1|MMNHCHMG1 M.musculus mRNA for non-histone chromosomal high-mobility group 1 protein Length = 2231 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 643 gaggaggatgaagaggatgaggaagaggagga 674
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| ||||||||| |||||||||||||| Sbjct: 93195 gaggaggatgaagaggaggaagaagaggagga 93226
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggaggag 546 |||||||||||||||||||||||| Sbjct: 79841 gaagaggatgaagaagaggaggag 79818
>gb|AC121505.14| Mus musculus chromosome 8, clone RP24-144M14, complete sequence Length = 163953 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 21905 gaggaggatgaagaggatgaggaagaggagga 21874
>gb|AC170753.7| Mus musculus BAC RP24-547D11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 234156 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 186513 gaggaggatgaagaggatgacgaagaggagga 186482
>gb|U00431.1|U00431 Mus musculus HMG-1 mRNA, complete cds Length = 1308 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagga 545 ||||||| |||||||||||| ||||||||||| Sbjct: 716 gaggaggatgaagaggatgaggaagaggagga 747
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 170515 gaagaggatgaagaagaggagga 170493
>ref|XM_629830.1| Dictyostelium discoideum hypothetical protein (DDB0184227), partial mRNA Length = 933 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 520 ggtgaagaggatgaagaagagga 542 ||||||||||||||||||||||| Sbjct: 31 ggtgaagaggatgaagaagagga 53
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 32215 gaagaggatgaagaagaggagga 32237
>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence Length = 186990 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 515 aggagggtgaagaggatgaagaagaggagga 545 |||||| |||||||||||| ||||||||||| Sbjct: 37836 aggaggatgaagaggatgaggaagaggagga 37806
>gb|AC141888.4| Mus musculus BAC clone RP23-462H3 from chromosome 19, complete sequence Length = 185192 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggagg 544 |||||||| |||||||| ||||||||||||| Sbjct: 139883 gaggagggagaagaggaggaagaagaggagg 139913
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 524 aagaggatgaagaagaggaggag 546 ||||||||||||||||||||||| Sbjct: 62610 aagaggatgaagaagaggaggag 62588
>ref|XM_001001990.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 515 aggagggtgaagaggatgaagaagaggagga 545 |||||| |||||||||||| ||||||||||| Sbjct: 679 aggaggatgaagaggatgaggaagaggagga 709
>ref|XM_485920.3| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 515 aggagggtgaagaggatgaagaagaggagga 545 |||||| |||||||||||| ||||||||||| Sbjct: 679 aggaggatgaagaggatgaggaagaggagga 709
>ref|XM_916659.2| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC434174), mRNA Length = 1275 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 515 aggagggtgaagaggatgaagaagaggagga 545 |||||| |||||||||||| ||||||||||| Sbjct: 679 aggaggatgaagaggatgaggaagaggagga 709
>gb|AC122001.2| Mus musculus BAC clone RP24-330I1 from chromosome 7, complete sequence Length = 155051 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 524 aagaggatgaagaagaggaggag 546 ||||||||||||||||||||||| Sbjct: 106817 aagaggatgaagaagaggaggag 106795
>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence Length = 228160 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 216042 gaagaggatgaagaagaggagga 216064
>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 204302 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 aagaggatgaagaagaggaggag 546 ||||||||||||||||||||||| Sbjct: 75607 aagaggatgaagaagaggaggag 75629
>dbj|AB071078.1| Macaca fascicularis testis cDNA clone:QtsA-16933, similar to human tripartite motif-containing 37 protein (TRIM37), mRNA, NM_001005207 Length = 2712 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 aagaggatgaagaagaggaggag 546 ||||||||||||||||||||||| Sbjct: 1009 aagaggatgaagaagaggaggag 1031
>ref|NM_001003618.1| Danio rerio zgc:100960 (zgc:100960), mRNA Length = 1330 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 386 gaagaggatgaagaagaggagga 408
>gb|BC078314.1| Danio rerio zgc:100960, mRNA (cDNA clone MGC:100960 IMAGE:7147354), complete cds Length = 1330 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 386 gaagaggatgaagaagaggagga 408
>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence Length = 136754 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 135139 gaagaggatgaagaagaggagga 135161
>emb|Z71559.1|SCYNL283C S.cerevisiae chromosome XIV reading frame ORF YNL283c Length = 3584 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 2025 gaagaggatgaagaagaggagga 2047
>gb|DQ332622.1| Synthetic construct Saccharomyces cerevisiae clone FLH201648.01X WSC2 gene, complete sequence Length = 1512 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 523 gaagaggatgaagaagaggagga 545 ||||||||||||||||||||||| Sbjct: 569 gaagaggatgaagaagaggagga 547
>emb|AJ891053.1| Clethrionomys glareolus partial adrab2 gene for alpha 2B adrenergic receptor Length = 1173 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 522 tgaagaggatgaagaagaggagg 544 ||||||||||||||||||||||| Sbjct: 851 tgaagaggatgaagaagaggagg 873
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggcgatccccagctgcgccagccgcc 350 |||||| ||||||||||||||||||| Sbjct: 415584 ggcgatgcccagctgcgccagccgcc 415609
>ref|XM_511962.1| PREDICTED: Pan troglodytes LOC455219 (LOC455219), mRNA Length = 2259 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 629 gtgaagaggaggaagaagaggaggag 654
>ref|XM_516261.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC460151), mRNA Length = 3756 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1795 gagggtgaggaggatgaagatgaggaggag 1824
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 202 gatgaagaagaagacgacgttgaaga 227 ||||||||||||| |||||||||||| Sbjct: 10622 gatgaagaagaagtcgacgttgaaga 10597
>gb|AY752997.1| Penaeus monodon clone ct108 microsatellite sequence Length = 679 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 369 agaggatgaagaagaggaggag 348
>ref|XM_417679.1| PREDICTED: Gallus gallus similar to neurofilament-L (LOC419528), mRNA Length = 2069 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 ggtgaagaggatgaagaagaggagga 545 |||||||||| ||||||||||||||| Sbjct: 1471 ggtgaagaggctgaagaagaggagga 1496
>ref|NM_015670.3| Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 3 (SENP3), mRNA Length = 2425 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 489 gtgaagaggaggaagaagaggaggag 514
>ref|NM_004634.2| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1), transcript variant 2, mRNA Length = 4710 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1786 gagggtgaggaggatgaagatgaggaggag 1815
>ref|NM_001003694.1| Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1), transcript variant 1, mRNA Length = 4728 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1786 gagggtgaggaggatgaagatgaggaggag 1815
>gb|AC128571.4| Rattus norvegicus 6 BAC CH230-424O13 (Children's Hospital Oakland Research Institute) complete sequence Length = 194127 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 ggagggtgaagaggatgaagaagaggagga 545 ||||| ||||||||| |||||||||||||| Sbjct: 52266 ggaggatgaagaggaggaagaagaggagga 52237
>gb|BC080658.1| Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 3, mRNA (cDNA clone MGC:90205 IMAGE:6155941), complete cds Length = 2425 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 489 gtgaagaggaggaagaagaggaggag 514
>gb|BC032613.1| Homo sapiens cDNA clone IMAGE:5555330, **** WARNING: chimeric clone **** Length = 3530 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 25 gtgaagaggaggaagaagaggaggag 50
>ref|XM_807566.1| Trypanosoma cruzi strain CL Brener flagellar radial spoke component (Tc00.1047053504089.50) partial mRNA Length = 1791 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagagga 542 |||||||| ||||||||| ||||||||||| Sbjct: 1317 cgaggaggatgaagaggaggaagaagagga 1346
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 |||||||| |||||||| |||||||||||| Sbjct: 132689 gaggagggagaagaggaggaagaagaggag 132660
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 |||||||| |||||||| |||||||||||| Sbjct: 177957 gaggagggagaagaggaggaagaagaggag 177986
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 165346 agaggatgaagaagaggaggag 165325
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 ||||||| ||||||||||||||||||||| Sbjct: 127028 gaggaggaagaagaggatgaagaagaggag 126999
>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence Length = 197927 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 ||||||| ||||||||||||||||||||| Sbjct: 58900 gaggaggaagaagaggatgaagaagaggag 58871
>gb|AY211044.1| Tribolium castaneum strain cSM microsatellite sequence Length = 264 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 156 agaggatgaagaagaggaggag 177
>gb|BC068262.1| Homo sapiens cDNA clone IMAGE:5272879, containing frame-shift errors Length = 4719 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1787 gagggtgaggaggatgaagatgaggaggag 1816
>emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chromosome 9 Contains a CpG island, complete sequence Length = 143499 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 515 aggagggtgaagaggatgaagaagaggagg 544 |||||||||||| ||| ||||||||||||| Sbjct: 653 aggagggtgaaggggaggaagaagaggagg 682
>ref|XM_967760.1| PREDICTED: Tribolium castaneum similar to Fms interacting protein (LOC661609), mRNA Length = 2118 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 961 agaggatgaagaagaggaggag 982
>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome Length = 221454 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagagga 542 |||||||| ||||||||||||||||| Sbjct: 8579 gagggtgaggaggatgaagaagagga 8604
>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome Length = 215678 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagagga 542 |||||||| ||||||||||||||||| Sbjct: 8613 gagggtgaggaggatgaagaagagga 8638
>emb|AL713696.1|HSM803056 Homo sapiens mRNA; cDNA DKFZp547C058 (from clone DKFZp547C058) Length = 4539 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1616 gagggtgaggaggatgaagatgaggaggag 1645
>emb|AJ851648.1| Gallus gallus mRNA for hypothetical protein, clone 15a21 Length = 2183 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagagga 542 |||||||| ||||||||| ||||||||||| Sbjct: 694 cgaggaggatgaagaggacgaagaagagga 723
>ref|NM_204902.2| Gallus gallus high-mobility group box 1 (HMGB1), mRNA Length = 2183 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 cgaggagggtgaagaggatgaagaagagga 542 |||||||| ||||||||| ||||||||||| Sbjct: 694 cgaggaggatgaagaggacgaagaagagga 723
>emb|AL834294.1|HSM805332 Homo sapiens mRNA; cDNA DKFZp762A152 (from clone DKFZp762A152) Length = 2269 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 301 gtgaagaggaggaagaagaggaggag 326
>emb|CR626749.1| full-length cDNA clone CS0DK002YD13 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2433 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 544 gtgaagaggaggaagaagaggaggag 569
>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence Length = 187418 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 524 aagaggatgaagaagaggagga 545 |||||||||||||||||||||| Sbjct: 88713 aagaggatgaagaagaggagga 88734
>ref|NM_181035.2| Bos taurus versican (CSPG2), mRNA Length = 10291 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||| |||||| Sbjct: 4232 gtgaagaggatgaagaagatgaggag 4257
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 524 aagaggatgaagaagaggagga 545 |||||||||||||||||||||| Sbjct: 93963 aagaggatgaagaagaggagga 93942
>gb|AY008763.1| Homo sapiens sentrin/SUMO-specific protease (SENP3) mRNA, complete cds Length = 2224 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 275 gtgaagaggaggaagaagaggaggag 300
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 494 ccgagcgcgccgatggcgccgaggag 519 |||||||||||||||| ||||||||| Sbjct: 4700747 ccgagcgcgccgatggggccgaggag 4700722 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tgccggggttgatggcggcg 202 |||||||||||||||||||| Sbjct: 2030031 tgccggggttgatggcggcg 2030050
>gb|AF176815.1|AF176815 Homo sapiens putative 8-hydroxyguanine DNA glycosylase gene, complete cds Length = 51803 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 31929 gagggtgaggaggatgaagatgaggaggag 31958
>gb|BC053851.1| Homo sapiens bromodomain and PHD finger containing, 1, transcript variant 1, mRNA (cDNA clone MGC:61492 IMAGE:6140996), complete cds Length = 4599 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1780 gagggtgaggaggatgaagatgaggaggag 1809
>dbj|D13222.1|QULNFLM Coturnix japonica gene for neurofilament-L, complete cds Length = 7913 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 ggtgaagaggatgaagaagaggagga 545 |||||||||| ||||||||||||||| Sbjct: 5876 ggtgaagaggctgaagaagaggagga 5901
>gb|AC102139.5| Mus musculus chromosome 15, clone RP23-286F21, complete sequence Length = 152946 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggag 543 ||||||| ||||||||||||||||||||| Sbjct: 87416 gaggaggaggaagaggatgaagaagaggag 87387
>gb|AF060457.1|AF060457 Bos taurus versican V1 splice-variant precursor, mRNA, complete cds Length = 7330 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||| |||||| Sbjct: 1271 gtgaagaggatgaagaagatgaggag 1296
>gb|AF060456.1|AF060456 Bos taurus versican V0 splice-variant precursor, mRNA, complete cds Length = 10291 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 ||||||||||||||||||| |||||| Sbjct: 4232 gtgaagaggatgaagaagatgaggag 4257
>gb|BC036374.1| Homo sapiens cDNA clone IMAGE:4821313, containing frame-shift errors Length = 4589 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1792 gagggtgaggaggatgaagatgaggaggag 1821
>gb|AC126052.4| Mus musculus BAC clone RP23-277H6 from 7, complete sequence Length = 202833 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 524 aagaggatgaagaagaggagga 545 |||||||||||||||||||||| Sbjct: 13483 aagaggatgaagaagaggagga 13504
>gb|AC022382.4| Homo sapiens chromosome 3 clone RP11-266J6 map 3p, complete sequence Length = 185067 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 95744 gagggtgaggaggatgaagatgaggaggag 95715
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 523 gaagaggatgaagaagaggagg 544 |||||||||||||||||||||| Sbjct: 63072 gaagaggatgaagaagaggagg 63093
>gb|M91585.1|HUMPRGRN Human Br140 mRNA, complete cds Length = 4320 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 517 gagggtgaagaggatgaagaagaggaggag 546 |||||||| ||||||||||| ||||||||| Sbjct: 1415 gagggtgaggaggatgaagatgaggaggag 1444
>gb|AF199459.1| Homo sapiens SUMO-1 specific protease 3 (SUSP3) mRNA, complete cds Length = 2258 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 294 gtgaagaggaggaagaagaggaggag 319
>emb|AL772188.8| Mouse DNA sequence from clone RP23-143O19 on chromosome 2, complete sequence Length = 207403 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 agaggatgaagaagaggaggag 546 |||||||||||||||||||||| Sbjct: 24468 agaggatgaagaagaggaggag 24447
>gb|AC016876.10| Homo sapiens chromosome 17, clone RP11-186B7, complete sequence Length = 60268 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 521 gtgaagaggatgaagaagaggaggag 546 |||||||||| ||||||||||||||| Sbjct: 31074 gtgaagaggaggaagaagaggaggag 31049
>dbj|D13223.1|QULNFLW Japanese quail genomic DNA for neurofilament-L (NF-L) Length = 7933 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 ggtgaagaggatgaagaagaggagga 545 |||||||||| ||||||||||||||| Sbjct: 5893 ggtgaagaggctgaagaagaggagga 5918
>dbj|AB021222.1| Streptomyces rochei type-II polyketide synthase genes, partial and complete cds Length = 4767 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 495 cgagcgcgccgatggcgccgag 516 |||||||||||||||||||||| Sbjct: 1644 cgagcgcgccgatggcgccgag 1623
>ref|NM_122171.2| Arabidopsis thaliana HD2B (HISTONE DEACETYLASE 2B) AT5G22650 (HD2B) transcript variant AT5G22650.2 mRNA, complete cds Length = 1200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 634 gaggatgaagaagaggaggag 654
>ref|NM_180725.1| Arabidopsis thaliana HD2B (HISTONE DEACETYLASE 2B) AT5G22650 (HD2B) transcript variant AT5G22650.1 mRNA, complete cds Length = 1195 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 648 gaggatgaagaagaggaggag 668
>ref|NM_116941.1| Arabidopsis thaliana unknown protein AT4G08710 mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 tgaagaagaagacgacgttga 224 ||||||||||||||||||||| Sbjct: 1482 tgaagaagaagacgacgttga 1502
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 122595 gaggaggaggaagaggaggaagaagaggaggag 122563
>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence Length = 201791 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||||||| || |||||||||||| Sbjct: 16251 gaggagggggaagaggaagaggaagaggaggag 16219
>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence Length = 206083 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| ||||||||||||||||| |||||| Sbjct: 99830 gaggaggaagaagaggatgaagaagaagaggag 99862
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence Length = 132061 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 128635 gaggaggaagaagaggaggaagaagaggaggag 128603
>ref|XM_631946.1| Dictyostelium discoideum hypothetical protein (DDB0219273), partial mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 561 tgaagaggatgaagaagagga 541
>ref|XM_632862.1| Dictyostelium discoideum hypothetical protein (DDB0218769), partial mRNA Length = 675 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 513 tgaagaggatgaagaagagga 493
>gb|AC138265.9| Mus musculus chromosome 5, clone RP23-41J13, complete sequence Length = 172279 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 143550 gaggaggaagaagaggaggaagaagaggaggag 143582
>ref|NM_188668.1| Oryza sativa (japonica cultivar-group), Ozsa8271 predicted mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 145 gaggatgaagaagaggaggag 165
>ref|XM_640341.1| Dictyostelium discoideum hypothetical protein (DDB0168530), partial mRNA Length = 1683 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 513 tgaagaggatgaagaagagga 493
>ref|XM_636736.1| Dictyostelium discoideum hypothetical protein (DDB0205751), partial mRNA Length = 1671 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 981 tgaagaggatgaagaagagga 1001
>ref|XM_635583.1| Dictyostelium discoideum hypothetical protein (DDB0205580), partial mRNA Length = 1044 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 516 tgaagaggatgaagaagagga 536 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgaagaggatgaagaagagga 542 ||||||||||||||||||||| Sbjct: 435 tgaagaggatgaagaagagga 455
>ref|XM_631197.1| Dictyostelium discoideum hypothetical protein (DDB0219431), partial mRNA Length = 6525 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagagga 542 |||||||| |||||||| ||||||||||| Sbjct: 1178 gaggagggagaagaggaagaagaagagga 1150
>ref|XM_630713.1| Dictyostelium discoideum structure-specific recognition protein 1 (DDB0216434), partial mRNA Length = 1584 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| ||||||||||| |||| |||||||| Sbjct: 610 gaggaggatgaagaggatgcagaaaaggaggag 642
>ref|XM_531426.1| PREDICTED: Pan troglodytes similar to Homo sapiens C21orf63 isoform B protein,variant1 (LOC473956), mRNA Length = 1471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 1037 gaggatgaagaagaggaggag 1057
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 58426 gaggatgaagaagaggaggag 58406 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 58335 gaggatgaagaagaggaggag 58315
>gb|AC167972.3| Mus musculus BAC clone RP24-73H24 from chromosome 13, complete sequence Length = 224330 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| || ||||| ||||||||||||||| Sbjct: 55788 gaggagggagaggaggaggaagaagaggaggag 55820 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| || ||||| ||||||||||||||| Sbjct: 55743 gaggagggagaggaggaggaagaagaggaggag 55775
>ref|XM_509001.1| PREDICTED: Pan troglodytes kinesin family member 21A (LOC451832), mRNA Length = 3282 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 277 gaggatgaagaagaggaggag 297
>ref|NM_177977.1| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 2, mRNA Length = 3981 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 800 gaggatgaagaagaggaggag 820
>ref|NM_003949.2| Homo sapiens huntingtin-associated protein 1 (neuroan 1) (HAP1), transcript variant 1, mRNA Length = 4084 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 800 gaggatgaagaagaggaggag 820
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 43083 gaggaggaggaagaggaggaagaagaggaggag 43051
>gb|BC054732.1| Mus musculus gametogenetin binding protein 1, mRNA (cDNA clone MGC:64749 IMAGE:5709552), complete cds Length = 5028 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||| ||| ||||||||||||||| Sbjct: 3193 gaggagggggaaggggaggaagaagaggaggag 3225
>gb|BT019205.1| Zea mays clone Contig878.F mRNA sequence Length = 1201 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 518 agggtgaagaggatgaagaagagga 542 ||||||| ||||||||||||||||| Sbjct: 64 agggtgaggaggatgaagaagagga 88
>gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, complete sequence Length = 179268 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| || ||||| ||||||||||||||| Sbjct: 120852 gaggagggggaggaggaggaagaagaggaggag 120884
>gb|BC060527.1| Mus musculus gametogenetin binding protein 1, mRNA (cDNA clone MGC:67514 IMAGE:5709552), complete cds Length = 5028 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||| ||| ||||||||||||||| Sbjct: 3193 gaggagggggaaggggaggaagaagaggaggag 3225
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 177632 gaggaggaagaagaggaggaagaagaggaggag 177664
>gb|AC162171.7| Mus musculus chromosome 5, clone RP23-143N11, complete sequence Length = 229553 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 166882 gaggaggaggaagaggaggaagaagaggaggag 166850
>gb|AY023660.1| Oryza sativa microsatellite MRG5985 containing (TTC)X21, genomic sequence Length = 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 511 gccgaggagggtgaagaggatgaagaaga 539 ||||||||||||| |||||| |||||||| Sbjct: 181 gccgaggagggtggagaggaagaagaaga 153
>gb|AY023444.1| Oryza sativa microsatellite MRG5769 containing (TCC)X8, closest to marker C955, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 gaggatgaagaagaggaggag 546 ||||||||||||||||||||| Sbjct: 138 gaggatgaagaagaggaggag 118
>gb|AY022939.1| Oryza sativa microsatellite MRG5264 containing (CTC)X9, closest to marker S10847A, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 511 gccgaggagggtgaagaggatgaagaaga 539 ||||||||||||| |||||| |||||||| Sbjct: 208 gccgaggagggtggagaggaagaagaaga 180
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||| ||| ||||||||||||||| Sbjct: 92548 gaggagggggaaggggaggaagaagaggaggag 92580
>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence Length = 155784 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 |||||||| |||||||| || |||||||||||| Sbjct: 155424 gaggagggggaagaggaagaggaagaggaggag 155456
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 511 gccgaggagggtgaagaggatgaagaaga 539 ||||||||||||| |||||| |||||||| Sbjct: 124418 gccgaggagggtggagaggaagaagaaga 124446
>gb|AC152063.5| Mus musculus BAC clone RP23-204I16 from chromosome 12, complete sequence Length = 209416 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 98365 gaggaggaggaagaggaggaagaagaggaggag 98397 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 514 gaggagggtgaagaggatgaagaagaggaggag 546 ||||||| |||||||| ||||||||||||||| Sbjct: 98338 gaggaggaagaagaggaggaagaagaggaggag 98370 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,944,780 Number of Sequences: 3902068 Number of extensions: 4944780 Number of successful extensions: 164489 Number of sequences better than 10.0: 1606 Number of HSP's better than 10.0 without gapping: 1600 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 155893 Number of HSP's gapped (non-prelim): 8538 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
