Clone Name | rbasd11e10 |
---|---|
Clone Library Name | barley_pub |
>GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial precursor (EC| 3.5.1.2) (GLS) (L-glutamine amidohydrolase) (K-glutaminase) [Contains: Glutaminase kidney isoform 68 kDa chain; Glutaminase kidney isoform 65 kDa chain] Length = 674 Score = 35.4 bits (80), Expect = 0.15 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 4/115 (3%) Frame = -2 Query: 513 RPNNGGSSALGMGSPFRFHLWRHINSGDGRTKTPLSPTVAGSEPHPFSMTHGLGGSSVQL 334 RP G A G+ + R H W G GR K P S ++ S P G GG+ Q Sbjct: 37 RPRGGSRPAAGLVAAARLHPWW---GGGGRAKGPGSGGLS-SSPSEILQELGKGGTPPQQ 92 Query: 333 MESSRQSLGVYHSYSVG---SLGQMQ-FSSGRGQTTLQSRRSQSREDLTSSLADL 181 + +Q G + G S G+ F + G+ + + ++ ++ L SL DL Sbjct: 93 QQQQQQQPGASPPAAPGPKDSPGETDAFGNSEGKEMVAAGDNKVKQGLLPSLEDL 147
>GATA2_HUMAN (P23769) Endothelial transcription factor GATA-2 (GATA-binding| protein 2) Length = 480 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -2 Query: 504 NGGSSALGMGSPFRFHLWRHINSGDGRTKTPLSPTVAGSEPHPFSMTHGLGGSS 343 +GG +AL + + W + +KTPL P+ AG P S+ G GG S Sbjct: 99 DGGKAALSAAAAHHHNPW----TVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGS 148
>PSTB_ALCFA (Q6WB51) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 291 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +2 Query: 428 PSPELICLHKWNLNGDPIPSAELPPLFGLKSGK*DLRNDLGMELLTHNI 574 P+PE+I + DPI +A++ LF DLR+D + ++THN+ Sbjct: 204 PNPEIILFDEPTSALDPIATAKIEDLFT------DLRDDYTIVIVTHNM 246
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 29.6 bits (65), Expect = 8.4 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = -2 Query: 366 THGLGGSSVQLMESSRQS--LGVYHSYSVGSLGQMQFSSGRGQTTLQSRRSQSREDLTSS 193 T G SS Q SSRQS G + S S S G+ Q SSG GQ+ +R SS Sbjct: 380 TSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSS 439
>TBX2_MOUSE (Q60707) T-box transcription factor TBX2 (T-box protein 2)| Length = 701 Score = 29.6 bits (65), Expect = 8.4 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = -2 Query: 495 SSALGMGSPFRFHLWRHINSGDGRTKTPLSPTVAGSEPHPFSMTHGLGGSSVQLMESSRQ 316 +SA +PF FHL +H+ + G P+ PT G P+P++ ++ L +S Sbjct: 532 ASAASTAAPFPFHLSQHMLASQG---IPM-PTFGGLFPYPYTYMAAAAAAASALPATSAA 587 Query: 315 SLGVYHSYSVGSLGQMQF 262 + + + GSL + F Sbjct: 588 AAA---AAAAGSLSRSPF 602
>TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box protein 2)| Length = 702 Score = 29.6 bits (65), Expect = 8.4 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = -2 Query: 495 SSALGMGSPFRFHLWRHINSGDGRTKTPLSPTVAGSEPHPFSMTHGLGGSSVQLMESSRQ 316 +SA +PF FHL +H+ + G P+ PT G P+P++ ++ L +S Sbjct: 531 ASAASTAAPFPFHLSQHMLASQG---IPM-PTFGGLFPYPYTYMAAAAAAASALPATSAA 586 Query: 315 SLGVYHSYSVGSLGQMQF 262 + + + GSL + F Sbjct: 587 AAA---AAAAGSLSRSPF 601 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,453,360 Number of Sequences: 219361 Number of extensions: 2181116 Number of successful extensions: 4853 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4748 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4849 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)