Clone Name | rbasd11e10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK070298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050G19, full insert sequence Length = 3246 Score = 466 bits (235), Expect = e-128 Identities = 498/583 (85%), Gaps = 12/583 (2%) Strand = Plus / Minus Query: 92 gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150 ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||| Sbjct: 2763 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 2704 Query: 151 aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210 |||||||| ||| |||||||| ||| ||||||||| |||| ||| |||||||||||||| Sbjct: 2703 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 2646 Query: 211 tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261 |||||| ||||||||||| || || |||||||| |||||| ||||| | |||| Sbjct: 2645 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 2586 Query: 262 aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321 ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct: 2585 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 2526 Query: 322 ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381 ||| || ||||||||||| || |||||||| ||||||||||| |||||||||||||||| Sbjct: 2525 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 2466 Query: 382 gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctgaatt 441 ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| | Sbjct: 2465 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctgaagt 2406 Query: 442 aatatgtctccataaatggaatctgaatggcgatcccataccaagcgcagaactacctcc 501 |||||| ||||||| ||| |||||||| || |||||||| | |||| ||| ||| ||| | Sbjct: 2405 aatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacaggactgcctgc 2346 Query: 502 gttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggatggaattgct 561 ||||| |||||||||| |||| ||| || ||||||||||| |||||||| |||||||| Sbjct: 2345 actgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggattgaattgct 2286 Query: 562 aacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatacaataagaat 621 || |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 2285 gacacacaatatggcacatatgactaacacaattgaaatcagaaacaacacaataagaat 2226 Query: 622 atttgggtttatctcccggtgtagtaaaatgtatccttgaata 664 |||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 2225 atttggatttatctctcggtggagtattctgtatccttgaata 2183
>ref|NM_195941.1| Oryza sativa (japonica cultivar-group) putative nucleosid phosphatase (OSJNAb0078C13.25), mRNA Length = 2109 Score = 432 bits (218), Expect = e-118 Identities = 438/511 (85%), Gaps = 9/511 (1%) Strand = Plus / Minus Query: 163 ctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttctctcgactggga 222 |||||||||| ||| ||||||||| |||| ||| |||||||||||||||||||| ||||| Sbjct: 2109 ctacacctttggaagatgaagatcggctagtgacgaagtgagatcttctctcgattggga 2050 Query: 223 tctccggctctgaagtgttgtctgacct--cttccgc-------tagaaaactgcatctg 273 |||||| || || |||||||| |||||| ||||| | |||||||||||||||| Sbjct: 2049 tctccgactttggagtgttgtttgacctggcttccacattccactagaaaactgcatctg 1990 Query: 274 acccaagctcccaactgaatagctatgatatacacccaacgattgcctggaagattccat 333 ||| ||||| ||||| |||||||| ||||| || ||||| || |||||||| || ||||| Sbjct: 1989 acctaagcttccaacagaatagctgtgatagacgcccaatgactgcctggaggactccat 1930 Query: 334 aagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatggggttctgaccc 393 |||||| || |||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1929 aagctgaacactgctgcctcctaatccatggctcatgctgaatggatggggctctgaccc 1870 Query: 394 agcaacagtagggctcaatggtgtctttgttcttccatcacctgaattaatatgtctcca 453 |||||||||||| |||| ||||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 1869 agcaacagtaggactcagaggtgtctttgttcttgcatcacctgaagtaatatgactcca 1810 Query: 454 taaatggaatctgaatggcgatcccataccaagcgcagaactacctccgttgttcggcct 513 || ||| |||||||| || |||||||| | |||| ||| ||| ||| | ||||| |||| Sbjct: 1809 tagatgaaatctgaaaggtgatcccatgctaagcacaggactgcctgcactgttctgcct 1750 Query: 514 aaaaagcggcaaataggatttgcggaatgaccttgggatggaattgctaacgcacaatat 573 |||||| |||| ||| || ||||||||||| |||||||| |||||||| || |||||||| Sbjct: 1749 aaaaagtggcagataagacttgcggaatgatcttgggattgaattgctgacacacaatat 1690 Query: 574 tgcacatatgaccaacacgattgaaatcagaaacaatacaataagaatatttgggtttat 633 ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1689 ggcacatatgactaacacaattgaaatcagaaacaacacaataagaatatttggatttat 1630 Query: 634 ctcccggtgtagtaaaatgtatccttgaata 664 ||| ||||| |||| |||||||||||||| Sbjct: 1629 ctctcggtggagtattctgtatccttgaata 1599
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 278 bits (140), Expect = 2e-71 Identities = 304/356 (85%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 92 gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150 ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||| Sbjct: 139392 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 139451 Query: 151 aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210 |||||||| ||| |||||||| ||| ||||||||| |||| ||| |||||||||||||| Sbjct: 139452 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 139509 Query: 211 tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261 |||||| ||||||||||| || || |||||||| |||||| ||||| | |||| Sbjct: 139510 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 139569 Query: 262 aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321 ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct: 139570 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 139629 Query: 322 ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381 ||| || ||||||||||| || |||||||| ||||||||||| |||||||||||||||| Sbjct: 139630 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 139689 Query: 382 gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437 ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 139690 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 139745 Score = 198 bits (100), Expect = 2e-47 Identities = 199/232 (85%) Strand = Plus / Plus Query: 433 acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492 ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| Sbjct: 140306 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 140365 Query: 493 actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552 ||| ||| | ||||| |||||||||| |||| ||| || ||||||||||| |||||||| Sbjct: 140366 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 140425 Query: 553 ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| || Sbjct: 140426 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 140485 Query: 613 aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664 ||||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 140486 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 140537
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 278 bits (140), Expect = 2e-71 Identities = 304/356 (85%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 92 gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150 ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||| Sbjct: 42854 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 42913 Query: 151 aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210 |||||||| ||| |||||||| ||| ||||||||| |||| ||| |||||||||||||| Sbjct: 42914 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 42971 Query: 211 tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261 |||||| ||||||||||| || || |||||||| |||||| ||||| | |||| Sbjct: 42972 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 43031 Query: 262 aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321 ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct: 43032 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 43091 Query: 322 ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381 ||| || ||||||||||| || |||||||| ||||||||||| |||||||||||||||| Sbjct: 43092 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 43151 Query: 382 gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437 ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 43152 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 43207 Score = 198 bits (100), Expect = 2e-47 Identities = 199/232 (85%) Strand = Plus / Plus Query: 433 acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492 ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| Sbjct: 43768 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 43827 Query: 493 actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552 ||| ||| | ||||| |||||||||| |||| ||| || ||||||||||| |||||||| Sbjct: 43828 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 43887 Query: 553 ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| || Sbjct: 43888 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 43947 Query: 613 aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664 ||||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 43948 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 43999
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 278 bits (140), Expect = 2e-71 Identities = 304/356 (85%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 92 gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150 ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||| Sbjct: 10122633 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 10122692 Query: 151 aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210 |||||||| ||| |||||||| ||| ||||||||| |||| ||| |||||||||||||| Sbjct: 10122693 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 10122750 Query: 211 tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261 |||||| ||||||||||| || || |||||||| |||||| ||||| | |||| Sbjct: 10122751 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 10122810 Query: 262 aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321 ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct: 10122811 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 10122870 Query: 322 ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381 ||| || ||||||||||| || |||||||| ||||||||||| |||||||||||||||| Sbjct: 10122871 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 10122930 Query: 382 gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437 ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 10122931 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 10122986 Score = 198 bits (100), Expect = 2e-47 Identities = 199/232 (85%) Strand = Plus / Plus Query: 433 acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492 ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| Sbjct: 10123547 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 10123606 Query: 493 actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552 ||| ||| | ||||| |||||||||| |||| ||| || ||||||||||| |||||||| Sbjct: 10123607 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 10123666 Query: 553 ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| || Sbjct: 10123667 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 10123726 Query: 613 aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664 ||||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 10123727 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 10123778
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 278 bits (140), Expect = 2e-71 Identities = 304/356 (85%), Gaps = 12/356 (3%) Strand = Plus / Plus Query: 92 gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150 ||||||||||||| ||||||||||| |||| || | ||||||||||||||||| ||| Sbjct: 10128672 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 10128731 Query: 151 aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210 |||||||| ||| |||||||| ||| ||||||||| |||| ||| |||||||||||||| Sbjct: 10128732 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 10128789 Query: 211 tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261 |||||| ||||||||||| || || |||||||| |||||| ||||| | |||| Sbjct: 10128790 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 10128849 Query: 262 aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321 ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || ||||| Sbjct: 10128850 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 10128909 Query: 322 ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381 ||| || ||||||||||| || |||||||| ||||||||||| |||||||||||||||| Sbjct: 10128910 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 10128969 Query: 382 gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437 ||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 10128970 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 10129025 Score = 198 bits (100), Expect = 2e-47 Identities = 199/232 (85%) Strand = Plus / Plus Query: 433 acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492 ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| Sbjct: 10129586 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 10129645 Query: 493 actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552 ||| ||| | ||||| |||||||||| |||| ||| || ||||||||||| |||||||| Sbjct: 10129646 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 10129705 Query: 553 ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| || Sbjct: 10129706 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 10129765 Query: 613 aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664 ||||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 10129766 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 10129817
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 ggcgatcccataccaagcgca 490 ||||||||||||||||||||| Sbjct: 658835 ggcgatcccataccaagcgca 658815
>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence Length = 190733 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 acgggagcgctattatttaca 104 ||||||||||||||||||||| Sbjct: 72009 acgggagcgctattatttaca 72029
>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19, complete sequence Length = 180994 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 acgggagcgctattatttaca 104 ||||||||||||||||||||| Sbjct: 107356 acgggagcgctattatttaca 107336
>emb|AL117356.5|CNS01DRK Human chromosome 14 DNA sequence BAC R-606A16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 178062 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 421 tgttcttccatcacctgaattaata 445 |||||| |||||||||||||||||| Sbjct: 68351 tgttctaccatcacctgaattaata 68375
>gb|AF064864.1| Homo sapiens chromosome 21q22.3 PAC 21L13, complete sequence Length = 120007 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 aagaatatttgggtttatct 635 |||||||||||||||||||| Sbjct: 14081 aagaatatttgggtttatct 14100
>gb|AF165176.1| Homo sapiens chromosome 21q22.3 PAC B02270, complete sequence Length = 120609 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 aagaatatttgggtttatct 635 |||||||||||||||||||| Sbjct: 56212 aagaatatttgggtttatct 56231
>ref|XM_655579.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3067.2), mRNA Length = 6624 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 atccatgtgtcatgctgaat 376 |||||||||||||||||||| Sbjct: 2621 atccatgtgtcatgctgaat 2640
>gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome 10, complete sequence Length = 166393 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 gtgtctttgttcttccatcacctg 437 |||||||||||||| ||||||||| Sbjct: 113142 gtgtctttgttcttacatcacctg 113119
>emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083 Length = 340000 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 aagaatatttgggtttatct 635 |||||||||||||||||||| Sbjct: 99343 aagaatatttgggtttatct 99362
>emb|X69190.1|GGZYX G.gallus mRNA for Zyxin Length = 2737 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctggctagagaagaagaaa 75 |||||||||||||||||||| Sbjct: 2300 tctggctagagaagaagaaa 2281
>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete sequence Length = 141172 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agtttgttatggcatgggat 127 |||||||||||||||||||| Sbjct: 9017 agtttgttatggcatgggat 8998
>ref|NM_001004386.1| Gallus gallus zyxin (ZYX), mRNA Length = 2737 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctggctagagaagaagaaa 75 |||||||||||||||||||| Sbjct: 2300 tctggctagagaagaagaaa 2281
>gb|AC104334.2| Homo sapiens chromosome 1 clone RP11-411H5, complete sequence Length = 129880 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tctggctagagaagaagaaa 75 |||||||||||||||||||| Sbjct: 84031 tctggctagagaagaagaaa 84050
>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence Length = 153726 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 accttgggatggaattgcta 562 |||||||||||||||||||| Sbjct: 118839 accttgggatggaattgcta 118858
>gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, complete sequence Length = 129095 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 attaatatgtctccataaat 458 |||||||||||||||||||| Sbjct: 38270 attaatatgtctccataaat 38251
>gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382J12, complete sequence Length = 163997 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 accttgggatggaattgcta 562 |||||||||||||||||||| Sbjct: 4263 accttgggatggaattgcta 4282
>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence Length = 214433 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cagctaatgaagaagtgaga 205 |||||||||||||||||||| Sbjct: 88487 cagctaatgaagaagtgaga 88506
>gb|AF019254.1|AF019254 Emericella nidulans DNA polymerase epsilon homolog (nimP) gene, complete cds Length = 7483 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 atccatgtgtcatgctgaat 376 |||||||||||||||||||| Sbjct: 2966 atccatgtgtcatgctgaat 2985
>emb|AL954856.8| Mouse DNA sequence from clone RP23-272K5 on chromosome 4, complete sequence Length = 65399 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 610 tacaataagaatatttgggtttat 633 |||||||||||||||||| ||||| Sbjct: 59285 tacaataagaatatttggttttat 59308 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,844,962 Number of Sequences: 3902068 Number of extensions: 5844962 Number of successful extensions: 97920 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97798 Number of HSP's gapped (non-prelim): 117 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)