ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK070298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
2ref|NM_195941.1| Oryza sativa (japonica cultivar-group) putative... 432 e-118
3gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome... 278 2e-71
4gb|AC092749.1| Genomic sequence for Oryza sativa (japonica culti... 278 2e-71
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 278 2e-71
7gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.3
8emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, ... 42 2.3
9emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in... 42 2.3
10emb|AL117356.5|CNS01DRK Human chromosome 14 DNA sequence BAC R-6... 42 2.3
11gb|AF064864.1| Homo sapiens chromosome 21q22.3 PAC 21L13, comple... 40 9.1
12gb|AF165176.1| Homo sapiens chromosome 21q22.3 PAC B02270, compl... 40 9.1
13ref|XM_655579.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.1
14gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome... 40 9.1
15emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083 40 9.1
16emb|X69190.1|GGZYX G.gallus mRNA for Zyxin 40 9.1
17emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chr... 40 9.1
18ref|NM_001004386.1| Gallus gallus zyxin (ZYX), mRNA 40 9.1
19gb|AC104334.2| Homo sapiens chromosome 1 clone RP11-411H5, compl... 40 9.1
20gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, com... 40 9.1
21gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, co... 40 9.1
22gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382... 40 9.1
23gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, comple... 40 9.1
24gb|AF019254.1|AF019254 Emericella nidulans DNA polymerase epsilo... 40 9.1
25emb|AL954856.8| Mouse DNA sequence from clone RP23-272K5 on chro... 40 9.1

>dbj|AK070298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050G19, full
            insert sequence
          Length = 3246

 Score =  466 bits (235), Expect = e-128
 Identities = 498/583 (85%), Gaps = 12/583 (2%)
 Strand = Plus / Minus

                                                                        
Query: 92   gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150
            |||||||||||||    ||||||||||| |||| || | ||||||||||||||||| |||
Sbjct: 2763 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 2704

                                                                        
Query: 151  aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210
            |||||||| |||  |||||||| ||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 2703 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 2646

                                                                        
Query: 211  tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261
            |||||| ||||||||||| || || |||||||| ||||||  ||||| |       ||||
Sbjct: 2645 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 2586

                                                                        
Query: 262  aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321
            ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct: 2585 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 2526

                                                                        
Query: 322  ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381
            ||| || ||||||||||| || |||||||| |||||||||||  ||||||||||||||||
Sbjct: 2525 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 2466

                                                                        
Query: 382  gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctgaatt 441
            ||| |||||||||||||||||||| ||||  ||||||||||||||| ||||||||||| |
Sbjct: 2465 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctgaagt 2406

                                                                        
Query: 442  aatatgtctccataaatggaatctgaatggcgatcccataccaagcgcagaactacctcc 501
            |||||| ||||||| ||| |||||||| || |||||||| | |||| ||| ||| ||| |
Sbjct: 2405 aatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacaggactgcctgc 2346

                                                                        
Query: 502  gttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggatggaattgct 561
              ||||| |||||||||| |||| ||| || ||||||||||| |||||||| ||||||||
Sbjct: 2345 actgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggattgaattgct 2286

                                                                        
Query: 562  aacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatacaataagaat 621
             || |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 2285 gacacacaatatggcacatatgactaacacaattgaaatcagaaacaacacaataagaat 2226

                                                       
Query: 622  atttgggtttatctcccggtgtagtaaaatgtatccttgaata 664
            |||||| |||||||| ||||| ||||   ||||||||||||||
Sbjct: 2225 atttggatttatctctcggtggagtattctgtatccttgaata 2183



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>ref|NM_195941.1| Oryza sativa (japonica cultivar-group) putative nucleosid phosphatase
            (OSJNAb0078C13.25), mRNA
          Length = 2109

 Score =  432 bits (218), Expect = e-118
 Identities = 438/511 (85%), Gaps = 9/511 (1%)
 Strand = Plus / Minus

                                                                        
Query: 163  ctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttctctcgactggga 222
            |||||||||| ||| ||||||||| |||| ||| |||||||||||||||||||| |||||
Sbjct: 2109 ctacacctttggaagatgaagatcggctagtgacgaagtgagatcttctctcgattggga 2050

                                                                        
Query: 223  tctccggctctgaagtgttgtctgacct--cttccgc-------tagaaaactgcatctg 273
            |||||| || || |||||||| ||||||  ||||| |       ||||||||||||||||
Sbjct: 2049 tctccgactttggagtgttgtttgacctggcttccacattccactagaaaactgcatctg 1990

                                                                        
Query: 274  acccaagctcccaactgaatagctatgatatacacccaacgattgcctggaagattccat 333
            ||| ||||| ||||| |||||||| ||||| || ||||| || |||||||| || |||||
Sbjct: 1989 acctaagcttccaacagaatagctgtgatagacgcccaatgactgcctggaggactccat 1930

                                                                        
Query: 334  aagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatggggttctgaccc 393
            |||||| || |||||||| |||||||||||  ||||||||||||||||||| ||||||||
Sbjct: 1929 aagctgaacactgctgcctcctaatccatggctcatgctgaatggatggggctctgaccc 1870

                                                                        
Query: 394  agcaacagtagggctcaatggtgtctttgttcttccatcacctgaattaatatgtctcca 453
            |||||||||||| ||||  ||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 1869 agcaacagtaggactcagaggtgtctttgttcttgcatcacctgaagtaatatgactcca 1810

                                                                        
Query: 454  taaatggaatctgaatggcgatcccataccaagcgcagaactacctccgttgttcggcct 513
            || ||| |||||||| || |||||||| | |||| ||| ||| ||| |  ||||| ||||
Sbjct: 1809 tagatgaaatctgaaaggtgatcccatgctaagcacaggactgcctgcactgttctgcct 1750

                                                                        
Query: 514  aaaaagcggcaaataggatttgcggaatgaccttgggatggaattgctaacgcacaatat 573
            |||||| |||| ||| || ||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 1749 aaaaagtggcagataagacttgcggaatgatcttgggattgaattgctgacacacaatat 1690

                                                                        
Query: 574  tgcacatatgaccaacacgattgaaatcagaaacaatacaataagaatatttgggtttat 633
             ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 1689 ggcacatatgactaacacaattgaaatcagaaacaacacaataagaatatttggatttat 1630

                                           
Query: 634  ctcccggtgtagtaaaatgtatccttgaata 664
            ||| ||||| ||||   ||||||||||||||
Sbjct: 1629 ctctcggtggagtattctgtatccttgaata 1599



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>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13,
              complete sequence
          Length = 146538

 Score =  278 bits (140), Expect = 2e-71
 Identities = 304/356 (85%), Gaps = 12/356 (3%)
 Strand = Plus / Plus

                                                                          
Query: 92     gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150
              |||||||||||||    ||||||||||| |||| || | ||||||||||||||||| |||
Sbjct: 139392 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 139451

                                                                          
Query: 151    aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210
              |||||||| |||  |||||||| ||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 139452 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 139509

                                                                          
Query: 211    tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261
              |||||| ||||||||||| || || |||||||| ||||||  ||||| |       ||||
Sbjct: 139510 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 139569

                                                                          
Query: 262    aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321
              ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct: 139570 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 139629

                                                                          
Query: 322    ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381
              ||| || ||||||||||| || |||||||| |||||||||||  ||||||||||||||||
Sbjct: 139630 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 139689

                                                                      
Query: 382    gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437
              ||| |||||||||||||||||||| ||||  ||||||||||||||| |||||||||
Sbjct: 139690 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 139745



 Score =  198 bits (100), Expect = 2e-47
 Identities = 199/232 (85%)
 Strand = Plus / Plus

                                                                          
Query: 433    acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492
              ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| 
Sbjct: 140306 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 140365

                                                                          
Query: 493    actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552
              ||| ||| |  ||||| |||||||||| |||| ||| || ||||||||||| ||||||||
Sbjct: 140366 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 140425

                                                                          
Query: 553    ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612
               |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 140426 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 140485

                                                                  
Query: 613    aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664
              ||||||||||||||| |||||||| ||||| ||||   ||||||||||||||
Sbjct: 140486 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 140537



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>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0023M11, from chromosome 10,
             complete sequence
          Length = 138668

 Score =  278 bits (140), Expect = 2e-71
 Identities = 304/356 (85%), Gaps = 12/356 (3%)
 Strand = Plus / Plus

                                                                         
Query: 92    gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150
             |||||||||||||    ||||||||||| |||| || | ||||||||||||||||| |||
Sbjct: 42854 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 42913

                                                                         
Query: 151   aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210
             |||||||| |||  |||||||| ||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 42914 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 42971

                                                                         
Query: 211   tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261
             |||||| ||||||||||| || || |||||||| ||||||  ||||| |       ||||
Sbjct: 42972 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 43031

                                                                         
Query: 262   aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321
             ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct: 43032 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 43091

                                                                         
Query: 322   ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381
             ||| || ||||||||||| || |||||||| |||||||||||  ||||||||||||||||
Sbjct: 43092 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 43151

                                                                     
Query: 382   gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437
             ||| |||||||||||||||||||| ||||  ||||||||||||||| |||||||||
Sbjct: 43152 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 43207



 Score =  198 bits (100), Expect = 2e-47
 Identities = 199/232 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433   acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492
             ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| 
Sbjct: 43768 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 43827

                                                                         
Query: 493   actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552
             ||| ||| |  ||||| |||||||||| |||| ||| || ||||||||||| ||||||||
Sbjct: 43828 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 43887

                                                                         
Query: 553   ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612
              |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 43888 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 43947

                                                                 
Query: 613   aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664
             ||||||||||||||| |||||||| ||||| ||||   ||||||||||||||
Sbjct: 43948 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 43999



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  278 bits (140), Expect = 2e-71
 Identities = 304/356 (85%), Gaps = 12/356 (3%)
 Strand = Plus / Plus

                                                                            
Query: 92       gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150
                |||||||||||||    ||||||||||| |||| || | ||||||||||||||||| |||
Sbjct: 10122633 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 10122692

                                                                            
Query: 151      aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210
                |||||||| |||  |||||||| ||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 10122693 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 10122750

                                                                            
Query: 211      tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261
                |||||| ||||||||||| || || |||||||| ||||||  ||||| |       ||||
Sbjct: 10122751 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 10122810

                                                                            
Query: 262      aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321
                ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct: 10122811 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 10122870

                                                                            
Query: 322      ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381
                ||| || ||||||||||| || |||||||| |||||||||||  ||||||||||||||||
Sbjct: 10122871 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 10122930

                                                                        
Query: 382      gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437
                ||| |||||||||||||||||||| ||||  ||||||||||||||| |||||||||
Sbjct: 10122931 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 10122986



 Score =  198 bits (100), Expect = 2e-47
 Identities = 199/232 (85%)
 Strand = Plus / Plus

                                                                            
Query: 433      acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492
                ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| 
Sbjct: 10123547 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 10123606

                                                                            
Query: 493      actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552
                ||| ||| |  ||||| |||||||||| |||| ||| || ||||||||||| ||||||||
Sbjct: 10123607 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 10123666

                                                                            
Query: 553      ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612
                 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 10123667 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 10123726

                                                                    
Query: 613      aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664
                ||||||||||||||| |||||||| ||||| ||||   ||||||||||||||
Sbjct: 10123727 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 10123778



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  278 bits (140), Expect = 2e-71
 Identities = 304/356 (85%), Gaps = 12/356 (3%)
 Strand = Plus / Plus

                                                                            
Query: 92       gctattatttacatggagtttgttatggcatgggat-cacatactagtcatgtcatcctg 150
                |||||||||||||    ||||||||||| |||| || | ||||||||||||||||| |||
Sbjct: 10128672 gctattatttacacaaggtttgttatgggatggtattctcatactagtcatgtcattctg 10128731

                                                                            
Query: 151      aaatgtaatgctctacaccttttgaacatgaagatcagctaatgaagaagtgagatcttc 210
                |||||||| |||  |||||||| ||| ||||||||| |||| ||| ||||||||||||||
Sbjct: 10128732 aaatgtaaggct--acacctttggaagatgaagatcggctagtgacgaagtgagatcttc 10128789

                                                                            
Query: 211      tctcgactgggatctccggctctgaagtgttgtctgacct--cttccgc-------taga 261
                |||||| ||||||||||| || || |||||||| ||||||  ||||| |       ||||
Sbjct: 10128790 tctcgattgggatctccgactttggagtgttgtttgacctggcttccacattccactaga 10128849

                                                                            
Query: 262      aaactgcatctgacccaagctcccaactgaatagctatgatatacacccaacgattgcct 321
                ||||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct: 10128850 aaactgcatctgacctaagcttccaacagaatagctgtgatagacgcccaatgactgcct 10128909

                                                                            
Query: 322      ggaagattccataagctggacgctgctgccgcctaatccatgtgtcatgctgaatggatg 381
                ||| || ||||||||||| || |||||||| |||||||||||  ||||||||||||||||
Sbjct: 10128910 ggaggactccataagctgaacactgctgcctcctaatccatggctcatgctgaatggatg 10128969

                                                                        
Query: 382      gggttctgacccagcaacagtagggctcaatggtgtctttgttcttccatcacctg 437
                ||| |||||||||||||||||||| ||||  ||||||||||||||| |||||||||
Sbjct: 10128970 gggctctgacccagcaacagtaggactcagaggtgtctttgttcttgcatcacctg 10129025



 Score =  198 bits (100), Expect = 2e-47
 Identities = 199/232 (85%)
 Strand = Plus / Plus

                                                                            
Query: 433      acctgaattaatatgtctccataaatggaatctgaatggcgatcccataccaagcgcaga 492
                ||||||| ||||||| ||||||| ||| |||||||| || |||||||| | |||| ||| 
Sbjct: 10129586 acctgaagtaatatgactccatagatgaaatctgaaaggtgatcccatgctaagcacagg 10129645

                                                                            
Query: 493      actacctccgttgttcggcctaaaaagcggcaaataggatttgcggaatgaccttgggat 552
                ||| ||| |  ||||| |||||||||| |||| ||| || ||||||||||| ||||||||
Sbjct: 10129646 actgcctgcactgttctgcctaaaaagtggcagataagacttgcggaatgatcttgggat 10129705

                                                                            
Query: 553      ggaattgctaacgcacaatattgcacatatgaccaacacgattgaaatcagaaacaatac 612
                 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 10129706 tgaattgctgacacacaatatggcacatatgactaacacaattgaaatcagaaacaacac 10129765

                                                                    
Query: 613      aataagaatatttgggtttatctcccggtgtagtaaaatgtatccttgaata 664
                ||||||||||||||| |||||||| ||||| ||||   ||||||||||||||
Sbjct: 10129766 aataagaatatttggatttatctctcggtggagtattctgtatccttgaata 10129817



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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 470    ggcgatcccataccaagcgca 490
              |||||||||||||||||||||
Sbjct: 658835 ggcgatcccataccaagcgca 658815



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>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence
          Length = 190733

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    acgggagcgctattatttaca 104
             |||||||||||||||||||||
Sbjct: 72009 acgggagcgctattatttaca 72029



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>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19,
              complete sequence
          Length = 180994

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     acgggagcgctattatttaca 104
              |||||||||||||||||||||
Sbjct: 107356 acgggagcgctattatttaca 107336



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>emb|AL117356.5|CNS01DRK Human chromosome 14 DNA sequence BAC R-606A16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178062

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 421   tgttcttccatcacctgaattaata 445
             |||||| ||||||||||||||||||
Sbjct: 68351 tgttctaccatcacctgaattaata 68375



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>gb|AF064864.1| Homo sapiens chromosome 21q22.3 PAC 21L13, complete sequence
          Length = 120007

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   aagaatatttgggtttatct 635
             ||||||||||||||||||||
Sbjct: 14081 aagaatatttgggtttatct 14100



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>gb|AF165176.1| Homo sapiens chromosome 21q22.3 PAC B02270, complete sequence
          Length = 120609

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   aagaatatttgggtttatct 635
             ||||||||||||||||||||
Sbjct: 56212 aagaatatttgggtttatct 56231



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>ref|XM_655579.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3067.2), mRNA
          Length = 6624

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atccatgtgtcatgctgaat 376
            ||||||||||||||||||||
Sbjct: 2621 atccatgtgtcatgctgaat 2640



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>gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome 10, complete sequence
          Length = 166393

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    gtgtctttgttcttccatcacctg 437
              |||||||||||||| |||||||||
Sbjct: 113142 gtgtctttgttcttacatcacctg 113119



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>emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   aagaatatttgggtttatct 635
             ||||||||||||||||||||
Sbjct: 99343 aagaatatttgggtttatct 99362



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>emb|X69190.1|GGZYX G.gallus mRNA for Zyxin
          Length = 2737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tctggctagagaagaagaaa 75
            ||||||||||||||||||||
Sbjct: 2300 tctggctagagaagaagaaa 2281



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>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete
            sequence
          Length = 141172

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  agtttgttatggcatgggat 127
            ||||||||||||||||||||
Sbjct: 9017 agtttgttatggcatgggat 8998



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>ref|NM_001004386.1| Gallus gallus zyxin (ZYX), mRNA
          Length = 2737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   tctggctagagaagaagaaa 75
            ||||||||||||||||||||
Sbjct: 2300 tctggctagagaagaagaaa 2281



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>gb|AC104334.2| Homo sapiens chromosome 1 clone RP11-411H5, complete sequence
          Length = 129880

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tctggctagagaagaagaaa 75
             ||||||||||||||||||||
Sbjct: 84031 tctggctagagaagaagaaa 84050



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>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence
          Length = 153726

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 543    accttgggatggaattgcta 562
              ||||||||||||||||||||
Sbjct: 118839 accttgggatggaattgcta 118858



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>gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, complete sequence
          Length = 129095

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   attaatatgtctccataaat 458
             ||||||||||||||||||||
Sbjct: 38270 attaatatgtctccataaat 38251



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>gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382J12, complete sequence
          Length = 163997

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  accttgggatggaattgcta 562
            ||||||||||||||||||||
Sbjct: 4263 accttgggatggaattgcta 4282



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>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence
          Length = 214433

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   cagctaatgaagaagtgaga 205
             ||||||||||||||||||||
Sbjct: 88487 cagctaatgaagaagtgaga 88506



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>gb|AF019254.1|AF019254 Emericella nidulans DNA polymerase epsilon homolog (nimP) gene,
            complete cds
          Length = 7483

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atccatgtgtcatgctgaat 376
            ||||||||||||||||||||
Sbjct: 2966 atccatgtgtcatgctgaat 2985



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>emb|AL954856.8| Mouse DNA sequence from clone RP23-272K5 on chromosome 4, complete
             sequence
          Length = 65399

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 610   tacaataagaatatttgggtttat 633
             |||||||||||||||||| |||||
Sbjct: 59285 tacaataagaatatttggttttat 59308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,844,962
Number of Sequences: 3902068
Number of extensions: 5844962
Number of successful extensions: 97920
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97798
Number of HSP's gapped (non-prelim): 117
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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