ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GPI11_KLULA (Q6CTT3) Glycosylphosphatidylinositol anchor biosynt... 29 2.5

>GPI11_KLULA (Q6CTT3) Glycosylphosphatidylinositol anchor biosynthesis protein|
           11
          Length = 217

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 183 ELRRQGR*LGVRCAGHTYPAXYDVYSC 103
           EL ++   L + C   TYPA YDV++C
Sbjct: 133 ELLKESWLLALHCCFLTYPAVYDVFNC 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,836,531
Number of Sequences: 219361
Number of extensions: 497324
Number of successful extensions: 1052
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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