ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC040225.1| Homo sapiens cDNA clone IMAGE:5196381, partial cds Length = 582 Score = 258 bits (130), Expect = 1e-65 Identities = 180/197 (91%), Gaps = 10/197 (5%) Strand = Plus / Minus Query: 157 tagtcatcggccctgacgacgaagttctccttgcgctcgtggaactcgccggtgcgggtg 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 tagtcatcggccctgacgacgaagttctccttgcgctcgtggaactcgccggtgcgggtg 250 Query: 217 ttgatgtcctcctcgagcctgctctcgcgcacctngaagtggccggagccgcggccgtgg 276 |||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| Sbjct: 249 ttgatgtcctcctccagcctactctcgcgcacctcgaagtggccggagccacgg------ 196 Query: 277 tggccgtggtggccgtggcggcagaccggcggtgtcgaactcctgcacgaacgtctcctt 336 |||||||| || ||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 195 ---ccgtggtgaccatggcggcgg-ccggcggtgtcgaactcctgcacgaacgtctcctt 140 Query: 337 gacgatgtgctcctgca 353 ||||||||||||||||| Sbjct: 139 gacgatgtgctcctgca 123 Score = 139 bits (70), Expect = 7e-30 Identities = 91/98 (92%) Strand = Plus / Minus Query: 1 gcgcttatttaagcgatgcacacgcgcacgacaggagctgatagccgccaaacacgcacg 60 ||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||| Sbjct: 465 gcgcttatttaagcgctgcacgcgcgcacgatcggggctgatagccgccaaacacgcacg 406 Query: 61 cctgcatacgctatacgaccgtgcgcagcatcacacat 98 ||||||||||||||||||| ||||||| |||||||||| Sbjct: 405 cctgcatacgctatacgactgtgcgcaacatcacacat 368
>emb|AJ242802.1|SST242802 Sporobolus stapfianus mRNA for putative glycine-rich protein Length = 562 Score = 109 bits (55), Expect = 6e-21 Identities = 108/125 (86%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 166 gccctgacgacgaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcc 225 |||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 347 gccctgacaaggacgttctccttgcgctcgtggaactcgccggtgcgcgtgttgatgtc- 289 Query: 226 tcctcgagcctgctctcgcgcacctngaagtggccggagccgcggccgtggtggccgtgg 285 ||| | | || |||||||| ||| |||||||||||||||| |||| |||| |||| || Sbjct: 288 -tctcaaacttggtctcgcgcgcctggaagtggccggagccgtggccttggttgccgcgg 230 Query: 286 tggcc 290 ||||| Sbjct: 229 tggcc 225
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence Length = 132549 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 166 gccctgacgacgaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcc 225 |||||| ||| |||| ||||| |||||||||||| ||||||||||| ||||||||||||| Sbjct: 67870 gccctggcgaggaagctctccctgcgctcgtggacctcgccggtgcaggtgttgatgtcc 67811 Query: 226 tcctcgagcctgctctcgcgcacc 249 ||||||| |||| ||||||||||| Sbjct: 67810 tcctcgaccctggtctcgcgcacc 67787
>gb|AY104409.1| Zea mays PCO124784 mRNA sequence Length = 553 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 166 gccctgacgacgaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcc 225 |||||| ||| |||| ||||| |||||||||||| ||||||||||| ||||||||||||| Sbjct: 353 gccctggcgaggaagctctccctgcgctcgtggacctcgccggtgcaggtgttgatgtcc 294 Query: 226 tcctcgagcctgctctcgcgcacc 249 ||||||| |||| ||||||||||| Sbjct: 293 tcctcgaccctggtctcgcgcacc 270
>ref|XM_463608.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 177 gaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcctcctcgagcct 236 |||| ||| |||||||||| ||||||||||||||| |||||||| ||||||||| | | | Sbjct: 672 gaagctctgcttgcgctcgcggaactcgccggtgcaggtgttgaagtcctcctccacctt 613 Query: 237 gctctcgcgcacc 249 | ||||||||||| Sbjct: 612 ggtctcgcgcacc 600 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 325 gaacgtctccttgacgatgtgctcctgc 352 ||||||||||||||||| ||||| |||| Sbjct: 531 gaacgtctccttgacgacgtgctgctgc 504
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 177 gaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcctcctcgagcct 236 |||| ||| |||||||||| ||||||||||||||| |||||||| ||||||||| | | | Sbjct: 39676358 gaagctctgcttgcgctcgcggaactcgccggtgcaggtgttgaagtcctcctccacctt 39676417 Query: 237 gctctcgcgcacc 249 | ||||||||||| Sbjct: 39676418 ggtctcgcgcacc 39676430 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 27190417 gccgtggtgtccgtggtggccgtgg 27190441 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 325 gaacgtctccttgacgatgtgctcctgc 352 ||||||||||||||||| ||||| |||| Sbjct: 39676499 gaacgtctccttgacgacgtgctgctgc 39676526
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 177 gaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcctcctcgagcct 236 |||| ||| |||||||||| ||||||||||||||| |||||||| ||||||||| | | | Sbjct: 157314 gaagctctgcttgcgctcgcggaactcgccggtgcaggtgttgaagtcctcctccacctt 157373 Query: 237 gctctcgcgcacc 249 | ||||||||||| Sbjct: 157374 ggtctcgcgcacc 157386 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 325 gaacgtctccttgacgatgtgctcctgc 352 ||||||||||||||||| ||||| |||| Sbjct: 157455 gaacgtctccttgacgacgtgctgctgc 157482
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 73.8 bits (37), Expect = 3e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 177 gaagttctccttgcgctcgtggaactcgccggtgcgggtgttgatgtcctcctcgagcct 236 |||| ||| |||||||||| ||||||||||||||| |||||||| ||||||||| | | | Sbjct: 27257 gaagctctgcttgcgctcgcggaactcgccggtgcaggtgttgaagtcctcctccacctt 27316 Query: 237 gctctcgcgcacc 249 | ||||||||||| Sbjct: 27317 ggtctcgcgcacc 27329 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 325 gaacgtctccttgacgatgtgctcctgc 352 ||||||||||||||||| ||||| |||| Sbjct: 27398 gaacgtctccttgacgacgtgctgctgc 27425
>ref|XM_754009.1| Ustilago maydis 521 hypothetical protein (UM02955.1) partial mRNA Length = 885 Score = 63.9 bits (32), Expect = 3e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 264 gccgcggccgtggtggccgtggtggccgtggcggca 299 ||||||| |||||||||||||||||||||||||||| Sbjct: 800 gccgcggtcgtggtggccgtggtggccgtggcggca 835 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gagccgcggccgtggtggccgtgg 285 ||||||||| |||||||||||||| Sbjct: 249 gagccgcggtcgtggtggccgtgg 272
>ref|XM_801122.1| Trypanosoma cruzi strain CL Brener nucleosome assembly protein-like protein (Tc00.1047053505983.20) partial mRNA Length = 1368 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtggccgtggcgg 297 ||||||||||||||||||||||||||||| Sbjct: 1309 ggccgtggtggccgtggtggccgtggcgg 1337 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtgg 294 |||||||||||||||||||||| Sbjct: 1304 gtggtggccgtggtggccgtgg 1325
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 266 cgcggccgtggtggccgtggtggccgtggcggc 298 |||||||||||||||||||| ||||| |||||| Sbjct: 1092851 cgcggccgtggtggccgtggaggccgcggcggc 1092883
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 266 cgcggccgtggtggccgtggtggccgtggcggc 298 |||||||||||||||||||| ||||| |||||| Sbjct: 69074 cgcggccgtggtggccgtggaggccgcggcggc 69106
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 264 gccgcggccgtggtggccgtggtggccg 291 ||||||||||||| |||||||||||||| Sbjct: 155799 gccgcggccgtggcggccgtggtggccg 155826
>ref|XM_456137.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F23716g predicted mRNA Length = 1665 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtggc 295 ||||||||||||||||||||||| Sbjct: 1541 gtggtggccgtggtggccgtggc 1563
>emb|CR724175.2|CNS0GLPX Tetraodon nigroviridis full-length cDNA Length = 1531 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Minus Query: 272 cgtggtggccgtggtggccgtgg 294 ||||||||||||||||||||||| Sbjct: 112 cgtggtggccgtggtggccgtgg 90 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 106 ggccgtggtggccgtggtgg 87
>emb|CR635704.2|CNS0EPHA Tetraodon nigroviridis full-length cDNA Length = 1537 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Minus Query: 272 cgtggtggccgtggtggccgtgg 294 ||||||||||||||||||||||| Sbjct: 118 cgtggtggccgtggtggccgtgg 96 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtgg 294 |||||||||||||||||||| ||||| Sbjct: 112 ggccgtggtggccgtggtggtcgtgg 87
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 gtggtggccgtggtggccgtggc 295 ||||||||||||||||||||||| Sbjct: 2215578 gtggtggccgtggtggccgtggc 2215556
>ref|XM_393827.2| PREDICTED: Apis mellifera similar to CG7959-PA (LOC410347), mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Minus Query: 272 cgtggtggccgtggtggccgtgg 294 ||||||||||||||||||||||| Sbjct: 661 cgtggtggccgtggtggccgtgg 639 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 655 ggccgtggtggccgtggtgg 636
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 272 cgtggtggccgtggtggccgtggcgg 297 ||||||||||||| |||||||||||| Sbjct: 765490 cgtggtggccgtgctggccgtggcgg 765465
>ref|XM_958769.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtgg 294 |||||||||||||||||||||| Sbjct: 1172 gtggtggccgtggtggccgtgg 1193
>ref|XM_330527.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtgg 294 |||||||||||||||||||||| Sbjct: 1172 gtggtggccgtggtggccgtgg 1193
>ref|XM_655383.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2871.2), mRNA Length = 2613 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 gtggccgtggtggccgtggcgg 297 |||||||||||||||||||||| Sbjct: 455 gtggccgtggtggccgtggcgg 476
>ref|XM_843222.1| PREDICTED: Canis familiaris similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (LOC606803), mRNA Length = 483 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 273 gtggtggccgtggtggccgtggcggc 298 |||||||||| ||||||||||||||| Sbjct: 269 gtggtggccgcggtggccgtggcggc 244
>gb|AY056023.1| Mycobacterium avium plasmid pVT2, complete sequence Length = 12868 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtgg 294 |||||||||||||||||||||| Sbjct: 8085 gtggtggccgtggtggccgtgg 8106
>emb|X52649.1|SCP68 S.cerevisiae p68 gene Length = 2733 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtggcggc 298 |||||||||||||||| ||||||||| Sbjct: 2578 gtggtggccgtggtggtcgtggcggc 2603
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 ggccggagccgcggccgtggtg 278 |||||||||||||||||||||| Sbjct: 17667 ggccggagccgcggccgtggtg 17646
>gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224257 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 gtggtggccgtggtggccgtgg 294 |||||||||||||||||||||| Sbjct: 157085 gtggtggccgtggtggccgtgg 157064 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggc 289 ||||||||||||||||||||| Sbjct: 157080 ggccgtggtggccgtggtggc 157060
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ctcctcgagcctgctctcgcgcacct 250 ||||||||||||||||||| |||||| Sbjct: 3366985 ctcctcgagcctgctctcgggcacct 3367010 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cgccggtgcgggtgttgatg 222 |||||||||||||||||||| Sbjct: 4407040 cgccggtgcgggtgttgatg 4407021
>gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 3 (NCED3) mRNA, complete cds Length = 2060 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 actcgccggtgcgggtgttga 220 ||||||||||||||||||||| Sbjct: 1569 actcgccggtgcgggtgttga 1549
>ref|XM_636814.1| Dictyostelium discoideum hypothetical protein (DDB0215297), partial mRNA Length = 693 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtggcgg 297 |||||| |||||||||||||||||| Sbjct: 80 gtggtgaccgtggtggccgtggcgg 104
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 1353 gccgtggtgtccgtggtggccgtgg 1329
>ref|XM_478024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 266 cgcggccgtggtggccgtggtggccgtggcggc 298 ||||| |||||||||||||| ||||| |||||| Sbjct: 517 cgcggtcgtggtggccgtggcggccggggcggc 549
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcgg 297 ||||| ||||||||||||||||| ||||| Sbjct: 129743 ggccgaggtggccgtggtggccgcggcgg 129715
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 312 cgaactcctgcacgaacgtctccttgacg 340 ||||||| ||| ||||||||||||||||| Sbjct: 127233 cgaactcgtgcccgaacgtctccttgacg 127261
>ref|XM_960459.1| Neurospora crassa OR74A hypothetical protein (NCU01921.1) partial mRNA Length = 3762 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtggcggc 298 ||||||| |||||||||||| |||||||| Sbjct: 1795 gccgtggcggccgtggtggctgtggcggc 1767 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 |||||||||||||| |||| |||||||| Sbjct: 1789 gcggccgtggtggctgtggcggccgtgg 1762
>ref|XM_952077.1| Neurospora crassa OR74A related to multifunctional cyclin-dependent kinase PHO85 [MIPS] (NCU01747.1) partial mRNA Length = 3738 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtg 293 ||||||||||||||||||| ||||| Sbjct: 2764 ggccgtggtggccgtggtgaccgtg 2740
>ref|XM_959216.1| Neurospora crassa OR74A hypothetical protein (NCU00505.1) partial mRNA Length = 372 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggc 295 ||||||||||||||||||||| Sbjct: 307 ggtggccgtggtggccgtggc 327
>ref|XM_324684.1| Neurospora crassa OR74A hypothetical protein (NCU00505.1) partial mRNA Length = 372 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggc 295 ||||||||||||||||||||| Sbjct: 307 ggtggccgtggtggccgtggc 327
>ref|XM_328185.1| Neurospora crassa OR74A related to multifunctional cyclin-dependent kinase PHO85 [MIPS] (NCU01747.1) partial mRNA Length = 3738 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtg 293 ||||||||||||||||||| ||||| Sbjct: 2764 ggccgtggtggccgtggtgaccgtg 2740
>ref|XM_329110.1| Neurospora crassa OR74A hypothetical protein (NCU01921.1) partial mRNA Length = 3762 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtggcggc 298 ||||||| |||||||||||| |||||||| Sbjct: 1795 gccgtggcggccgtggtggctgtggcggc 1767 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 |||||||||||||| |||| |||||||| Sbjct: 1789 gcggccgtggtggctgtggcggccgtgg 1762
>gb|AC115028.17| Mus musculus chromosome 5, clone RP24-245G22, complete sequence Length = 188423 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 cacacatgcttacatgaatac 112 ||||||||||||||||||||| Sbjct: 9692 cacacatgcttacatgaatac 9672
>ref|XM_657377.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4865.2), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtggc 289 ||||||||||||||||||||| Sbjct: 1465 ggccgtggtggccgtggtggc 1485
>ref|XM_749434.1| Aspergillus fumigatus Af293 ribosome associated protein Stm1 (Afu3g10920) partial mRNA Length = 996 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggtggccgtggc 295 ||||||||||||| || |||||||||||| Sbjct: 878 gcggccgtggtggtcgcggtggccgtggc 906
>ref|XM_386844.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06668.1) partial mRNA Length = 1212 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtggccgtggcgg 297 |||||||| |||||||||||||| ||||| Sbjct: 1051 ggccgtggcggccgtggtggccgaggcgg 1079
>ref|XM_567302.1| Cryptococcus neoformans var. neoformans JEC21 Eukaryotic translation initiation factor 2C 2 (CNJ00490) partial mRNA Length = 2998 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtggccgtggcgg 297 ||||| ||||||||||||||||| ||||| Sbjct: 962 ggccgaggtggccgtggtggccgcggcgg 990
>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence Length = 196947 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 cacacatgcttacatgaatac 112 ||||||||||||||||||||| Sbjct: 132591 cacacatgcttacatgaatac 132571
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 1440 gccgtggtgtccgtggtggccgtgg 1416
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 1396 gccgtggtgtccgtggtggccgtgg 1372
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtggccgtg 293 ||||||||||||||||||| ||||| Sbjct: 4057 ggccgtggtggccgtggtgaccgtg 4081
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 3745 gccgtggtgtccgtggtggccgtgg 3721
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 actcgccggtgcgggtgttga 220 ||||||||||||||||||||| Sbjct: 144370 actcgccggtgcgggtgttga 144350
>dbj|AB226169.1| Aspergillus oryzae cDNA, contig sequence: AoEST3027 Length = 1290 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggtggccgtggc 295 |||| ||||||| |||||||||||||||| Sbjct: 913 gcggacgtggtgcccgtggtggccgtggc 941
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtggc 295 |||||||||| ||||||||||| |||||| Sbjct: 2107421 gcggccgtggcggccgtggtggtcgtggc 2107393
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggtggccgtggc 295 |||| ||||||| |||||||||||||||| Sbjct: 1719163 gcggacgtggtgcccgtggtggccgtggc 1719191
>gb|DQ145931.1| Hordeum vulgare subsp. vulgare 9-cis-epoxycarotenoid dioxygenase 2 mRNA, complete cds Length = 1830 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 actcgccggtgcgggtgttga 220 ||||||||||||||||||||| Sbjct: 1361 actcgccggtgcgggtgttga 1341
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 gccgcggccgtggtggccgtggtgg 288 |||||||| |||||||||||||||| Sbjct: 4606110 gccgcggcggtggtggccgtggtgg 4606086
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 266 cgcggccgtggtggccgtggtggccgtggcggc 298 ||||| |||||||||||||| ||||| |||||| Sbjct: 16721672 cgcggtcgtggtggccgtggcggccggggcggc 16721640
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 actcgccggtgcgggtgttga 220 ||||||||||||||||||||| Sbjct: 24765681 actcgccggtgcgggtgttga 24765661 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 25342484 gcggccgtggtggccgtggt 25342503
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 gccgcggccgtggtggccgtggtgg 288 |||||||| |||||||||||||||| Sbjct: 129958 gccgcggcggtggtggccgtggtgg 129934
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 98095 gccgtggtgtccgtggtggccgtgg 98119
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 266 cgcggccgtggtggccgtggtggccgtggcggc 298 ||||| |||||||||||||| ||||| |||||| Sbjct: 61584 cgcggtcgtggtggccgtggcggccggggcggc 61552
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577G06 Length = 58137 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 gccgcggccgtggtggccgtggtgg 288 |||||||| |||||||||||||||| Sbjct: 20615 gccgcggcggtggtggccgtggtgg 20591
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 gccgtggtggccgtggtggccgtgg 294 ||||||||| ||||||||||||||| Sbjct: 1420 gccgtggtgtccgtggtggccgtgg 1396
>gb|DQ275159.1| Streptomyces globisporus LndJ (lndJ) gene, complete cds Length = 1706 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tggccgtggtggccgtggcgg 297 ||||||||||||||||||||| Sbjct: 868 tggccgtggtggccgtggcgg 888
>ref|XM_469066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 477 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 162 gcggccgtggtggccgtggt 181
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggcggc 298 ||||||||||||||||| |||||| Sbjct: 565193 ggtggccgtggtggccgaggcggc 565216
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 147151 gcggccgtggtggccgtggt 147170
>ref|XM_591239.2| PREDICTED: Bos taurus similar to transcriptional regulator protein (LOC513544), mRNA Length = 2073 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| ||||||||||||||| Sbjct: 483 ggccgtggtggtggtggtggccgtggcg 456
>ref|XM_363450.1| Magnaporthe grisea 70-15 hypothetical protein (MG01376.4) partial mRNA Length = 3420 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 tctccttgcgctcgtggaactcgc 205 ||||||||| |||||||||||||| Sbjct: 2463 tctccttgcactcgtggaactcgc 2486
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 51533 gcggccgtggtggccgtggt 51514
>ref|XM_459686.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E09251g) partial mRNA Length = 990 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 178 ggccgtggtggccgtggtgg 197 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtgg 294 |||||||||||||||||||| Sbjct: 175 ggtggccgtggtggccgtgg 194
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cacacatgcttacatgaatacaca 115 ||||||||| |||||||||||||| Sbjct: 171683 cacacatgcatacatgaatacaca 171660
>ref|XM_954550.1| Neurospora crassa OR74A DNA MISMATCH REPAIR PROTEIN MSH2 (NCU02230.1) partial mRNA Length = 2814 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tctccttgacgatgtgctcc 349 |||||||||||||||||||| Sbjct: 2290 tctccttgacgatgtgctcc 2271
>ref|XM_955832.1| Neurospora crassa OR74A hypothetical protein (NCU06678.1) partial mRNA Length = 4353 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtgg 294 |||||||||||||||||||| Sbjct: 4255 ggtggccgtggtggccgtgg 4274
>ref|XM_957415.1| Neurospora crassa OR74A hypothetical protein (NCU08295.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggcggc 298 |||||||| ||||||||||||||| Sbjct: 973 ggtggccgcggtggccgtggcggc 996
>ref|XM_326963.1| Neurospora crassa OR74A hypothetical protein (NCU06678.1) partial mRNA Length = 4353 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtgg 294 |||||||||||||||||||| Sbjct: 4255 ggtggccgtggtggccgtgg 4274
>ref|XM_329000.1| Neurospora crassa OR74A hypothetical protein (NCU08295.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggcggc 298 |||||||| ||||||||||||||| Sbjct: 973 ggtggccgcggtggccgtggcggc 996
>ref|XM_331005.1| Neurospora crassa OR74A DNA MISMATCH REPAIR PROTEIN MSH2 (NCU02230.1) partial mRNA Length = 2814 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tctccttgacgatgtgctcc 349 |||||||||||||||||||| Sbjct: 2290 tctccttgacgatgtgctcc 2271
>ref|XM_602690.2| PREDICTED: Bos taurus hypothetical LOC524368 (LOC524368), mRNA Length = 636 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gccgtggtggccgtggtggc 289 |||||||||||||||||||| Sbjct: 574 gccgtggtggccgtggtggc 593
>ref|NM_175539.2| Mus musculus RIKEN cDNA A130007F10 gene (A130007F10Rik), mRNA Length = 2917 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||||| |||| Sbjct: 275 ccgtggtggccgtggtggcggtgg 252
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgt 292 |||| ||||||||||||||||||| Sbjct: 562793 ggccctggtggccgtggtggccgt 562770
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 25251175 gcggccgtggtggccgtggt 25251194
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gccgtggtggccgtggcggc 298 |||||||||||||||||||| Sbjct: 2313259 gccgtggtggccgtggcggc 2313278
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cacacatgcttacatgaatacaca 115 ||||||||| |||||||||||||| Sbjct: 69741 cacacatgcatacatgaatacaca 69764
>ref|XM_757280.1| Ustilago maydis 521 hypothetical protein (UM06226.1) partial mRNA Length = 2487 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 ||||||||||| |||||||| ||||||| Sbjct: 1679 gcggccgtggtagccgtggtagccgtgg 1652
>ref|XM_568677.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01950) partial mRNA Length = 3075 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggcggc 298 ||||||||||||||||| |||||| Sbjct: 386 ggtggccgtggtggccgaggcggc 409
>emb|CR727314.2|CNS0GO54 Tetraodon nigroviridis full-length cDNA Length = 1529 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| |||||||| ||||||| Sbjct: 104 ggccgtggtggtcgtggtggtcgtggcg 77
>emb|CR733383.2|CNS0GSOB Tetraodon nigroviridis full-length cDNA Length = 1529 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| |||||||| ||||||| Sbjct: 105 ggccgtggtggtcgtggtggtcgtggcg 78
>emb|CR729785.2|CNS0GQ1R Tetraodon nigroviridis full-length cDNA Length = 1493 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 |||| ||||||||||||||||| ||||| Sbjct: 102 gcggtcgtggtggccgtggtggtcgtgg 75
>emb|CR729441.2|CNS0GPS7 Tetraodon nigroviridis full-length cDNA Length = 1508 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 ||||||||||||| |||||||| ||||| Sbjct: 104 gcggccgtggtggtcgtggtggtcgtgg 77
>emb|CR728949.2|CNS0GPEJ Tetraodon nigroviridis full-length cDNA Length = 1523 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| |||||||| ||||||| Sbjct: 104 ggccgtggtggtcgtggtggtcgtggcg 77
>emb|CR728905.2|CNS0GPDB Tetraodon nigroviridis full-length cDNA Length = 1526 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 ||||||||||||| |||||||| ||||| Sbjct: 106 gcggccgtggtggtcgtggtggtcgtgg 79
>emb|CR724577.2|CNS0GM13 Tetraodon nigroviridis full-length cDNA Length = 1517 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| |||||||| ||||||| Sbjct: 101 ggccgtggtggtcgtggtggtcgtggcg 74
>emb|CR723791.2|CNS0GLF9 Tetraodon nigroviridis full-length cDNA Length = 1527 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtggccgtggcg 296 ||||||||||| |||||||| ||||||| Sbjct: 105 ggccgtggtggtcgtggtggtcgtggcg 78
>emb|CR654233.2|CNS0F3RZ Tetraodon nigroviridis full-length cDNA Length = 1251 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 |||||||||||||||||| ||||| Sbjct: 110 ccgtggtggccgtggtggtcgtgg 87
>emb|CR653005.2|CNS0F2TV Tetraodon nigroviridis full-length cDNA Length = 1512 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 gcggccgtggtggccgtggtggccgtgg 294 ||||||||||||| |||||||| ||||| Sbjct: 98 gcggccgtggtggtcgtggtggtcgtgg 71
>emb|CR645973.2|CNS0EXEJ Tetraodon nigroviridis full-length cDNA Length = 1516 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tggtggccgtggtggccgtggcgg 297 |||||| ||||||||||||||||| Sbjct: 112 tggtggtcgtggtggccgtggcgg 89
>emb|CR644503.2|CNS0EW9P Tetraodon nigroviridis full-length cDNA Length = 1515 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 |||||||||||||||||| ||||| Sbjct: 105 ccgtggtggccgtggtggtcgtgg 82
>emb|CR643585.2|CNS0EVK7 Tetraodon nigroviridis full-length cDNA Length = 1523 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tggtggccgtggtggccgtggcgg 297 |||||| ||||||||||||||||| Sbjct: 118 tggtggtcgtggtggccgtggcgg 95
>ref|XM_502242.1| Yarrowia lipolytica CLIB122, YALI0D00451g predicted mRNA Length = 1755 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||| |||||| Sbjct: 602 ccgtggtggccgtggtgaccgtgg 579
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gccgcggccgtggtggccgt 283 |||||||||||||||||||| Sbjct: 1979701 gccgcggccgtggtggccgt 1979720
>emb|X62517.1|SSNDHAIGE Synechocystis sp.PCC6803 ndhA, ndhI, ndhG & ndhE genes for NADH-dehydrogenase subunits Length = 3229 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cggtgcgggtgttgatgtcc 225 |||||||||||||||||||| Sbjct: 2784 cggtgcgggtgttgatgtcc 2803
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ggtggccgtggtggccgtgg 294 |||||||||||||||||||| Sbjct: 675988 ggtggccgtggtggccgtgg 675969 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 675985 ggccgtggtggccgtggtgg 675966
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cgtggtggccgtggtggccgtggc 295 ||||||||||| |||||||||||| Sbjct: 293699 cgtggtggccgcggtggccgtggc 293676
>emb|AJ300832.1|CAC300832 Delftia acidovorans ORF1 (partial), ORF2, ech gene, fcs gene, ORF5 and ORF6 (partial) Length = 7505 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggccgtggtggccgtggcggc 298 ||||||| |||||||||||||||| Sbjct: 6782 ggtggccctggtggccgtggcggc 6805
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtggcggcag 300 ||||||||||||||||| ||||| |||| Sbjct: 151338 gtggtggccgtggtggcggtggcagcag 151365
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 123218 ggccgtggtggccgtggtgg 123237
>dbj|AK076436.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832423I21 product:DKFZP434O125 protein, full insert sequence Length = 2917 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||||| |||| Sbjct: 275 ccgtggtggccgtggtggcggtgg 252
>dbj|AK037333.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130007F10 product:hypothetical G-protein beta WD-40 repeats containing protein, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||||| |||| Sbjct: 218 ccgtggtggccgtggtggcggtgg 195
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tggtggccgtggtggccgtggcgg 297 |||||||||||||||| ||||||| Sbjct: 9998776 tggtggccgtggtggcggtggcgg 9998753
>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence Length = 186264 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gtggtggccgtggtggccgtggcggcag 300 ||||||||||||||||| ||||| |||| Sbjct: 37921 gtggtggccgtggtggcggtggcagcag 37948
>gb|AF168719.1|AF168719 Trypanosoma brucei rhodesiense fibrillarin mRNA, complete cds Length = 1074 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 ccgcggccgtggtggccgtggtgg 288 ||||||||| |||||||||||||| Sbjct: 123 ccgcggccgcggtggccgtggtgg 146
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cggtgcgggtgttgatgtcc 225 |||||||||||||||||||| Sbjct: 3267470 cggtgcgggtgttgatgtcc 3267451
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 tggtggccgtggtggccgtggcgg 297 |||||||||||||||| ||||||| Sbjct: 28080 tggtggccgtggtggcggtggcgg 28057
>emb|AL670220.8| Mouse DNA sequence from clone RP23-260P9 on chromosome X, complete sequence Length = 180488 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||||| |||| Sbjct: 154098 ccgtggtggccgtggtggcggtgg 154121
>dbj|AK103330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125N05, full insert sequence Length = 564 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggccgtggtggccgtggt 286 |||||||||||||||||||| Sbjct: 120 gcggccgtggtggccgtggt 139
>ref|NM_209120.1| Eremothecium gossypii ADL329Wp (ADL329W), mRNA Length = 336 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 264 ggccgtggtggccgtggtgg 283
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ggccgtggtggccgtggtgg 288 |||||||||||||||||||| Sbjct: 2501021 ggccgtggtggccgtggtgg 2501040
>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence Length = 203896 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cacacatgcttacatgaatacaca 115 |||||||||||||||| ||||||| Sbjct: 132113 cacacatgcttacatgtatacaca 132090
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cacacatgcttacatgaatacaca 115 ||||||||| |||||||||||||| Sbjct: 137200 cacacatgcatacatgaatacaca 137223
>gb|AY107604.1| Zea mays PCO144978 mRNA sequence Length = 702 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cggccgtggtggccgtggtggccg 291 |||||||||||| ||||||||||| Sbjct: 188 cggccgtggtgggcgtggtggccg 165
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ggtggccgtggtggccgtgg 294 |||||||||||||||||||| Sbjct: 4377091 ggtggccgtggtggccgtgg 4377072
>gb|L04950.1|WALMHCI01X Macropus rufogriseus MHC class I protein (Maru-UA*01) mRNA, 3' end Length = 1470 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggccggagccgcggccgtgg 276 |||||||||||||||||||| Sbjct: 176 ggccggagccgcggccgtgg 195
>gb|AC127258.4| Mus musculus BAC clone RP24-302G16 from 8, complete sequence Length = 163028 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cacacatgcttacatgaatacaca 115 ||||||||| |||||||||||||| Sbjct: 135996 cacacatgcatacatgaatacaca 136019
>gb|DQ280500.1| Streptomyces olindensis DAUFPE 5622 cosmomycin gene cluster, partial sequence Length = 14080 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 266 cgcggccgtggtggccgtggtggccgtggcgg 297 ||||||||||| ||||||| ||||||||||| Sbjct: 3961 cgcggccgtggccgccgtggcggccgtggcgg 3930
>gb|AF030634.1|AF030634 Neurospora crassa DNA mismatch repair protein (MSH2) gene, complete cds Length = 3781 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tctccttgacgatgtgctcc 349 |||||||||||||||||||| Sbjct: 2678 tctccttgacgatgtgctcc 2659
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ccgtggtggccgtggtggccgtgg 294 ||||||||||||||||| |||||| Sbjct: 46795 ccgtggtggccgtggtgaccgtgg 46818 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,893,647 Number of Sequences: 3902068 Number of extensions: 1893647 Number of successful extensions: 41273 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40293 Number of HSP's gapped (non-prelim): 951 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
