Clone Name | rbasd11d21 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha s... | 31 | 3.1 |
---|
>RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1 Query: 4 ETNNICLLTRVAYRELYN-YNQPSFVISCGFASKHNAAVVAVPAFACRYISVDTVYPTWM 180 ET + LLT +A+ Y+ + V++C A++ N AF + +D VY + Sbjct: 267 ETTDAALLTDMAFSNFYSGIKESEVVLACIMAARANIEKEPDYAFVAAELLLDVVYKEAL 326 Query: 181 DRKK 192 DR + Sbjct: 327 DRSR 330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,387,524 Number of Sequences: 219361 Number of extensions: 1536498 Number of successful extensions: 4263 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 4110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4262 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)