ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha s... 31 3.1

>RIR1_CHLMU (Q9PL93) Ribonucleoside-diphosphate reductase alpha subunit (EC|
           1.17.4.1) (Ribonucleotide reductase)
          Length = 1047

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 4   ETNNICLLTRVAYRELYN-YNQPSFVISCGFASKHNAAVVAVPAFACRYISVDTVYPTWM 180
           ET +  LLT +A+   Y+   +   V++C  A++ N       AF    + +D VY   +
Sbjct: 267 ETTDAALLTDMAFSNFYSGIKESEVVLACIMAARANIEKEPDYAFVAAELLLDVVYKEAL 326

Query: 181 DRKK 192
           DR +
Sbjct: 327 DRSR 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,387,524
Number of Sequences: 219361
Number of extensions: 1536498
Number of successful extensions: 4263
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4262
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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