ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11d17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_184331.2| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
3dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
4dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
6dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8gb|AY107101.1| Zea mays PCO079267 mRNA sequence 88 4e-14
9gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, com... 42 2.1
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
11dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
12dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
13ref|XM_476339.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
14gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, com... 40 8.1
15gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL0... 40 8.1
16gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete... 40 8.1
17emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chr... 40 8.1
18gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 8.1
19emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chr... 40 8.1
20emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chro... 40 8.1
21emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J... 40 8.1
22emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and l... 40 8.1
23tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (... 40 8.1
24gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, co... 40 8.1
25gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, co... 40 8.1
26gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, com... 40 8.1
27gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosom... 40 8.1
28gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, c... 40 8.1
29dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
30dbj|AK066040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
31dbj|AK061192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
32emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on ch... 40 8.1
33gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 8.1
34emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chr... 40 8.1
35dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1 
>ref|NM_184331.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 834 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 775

                                                                       
Query: 335 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 774 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 715

                                                                  
Query: 395 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 449
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 714 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 660



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 480 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 626 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 567

                                   
Query: 540 agatcccttggagactatcacctt 563
           ||| |||||||||||| |||||||
Sbjct: 566 agagcccttggagactgtcacctt 543
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>dbj|AK104561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C02, full
           insert sequence
          Length = 1102

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 862 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 803

                                                                       
Query: 335 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 802 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 743

                                                                  
Query: 395 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 449
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 742 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 688



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 480 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 654 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 595

                                   
Query: 540 agatcccttggagactatcacctt 563
           ||| |||||||||||| |||||||
Sbjct: 594 agagcccttggagactgtcacctt 571
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>dbj|AK104721.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A12, full
           insert sequence
          Length = 1043

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 834 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 775

                                                                       
Query: 335 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 774 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 715

                                                                  
Query: 395 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctc 449
           ||||||| ||    || |||||||||||||||||||||||  | |||||||||||
Sbjct: 714 tctgcacattcaccggtagctcggtgaattcagggccctcgtaagggaatttctc 660



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 480 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 626 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 567

                                   
Query: 540 agatcccttggagactatcacctt 563
           ||| |||||||||||| |||||||
Sbjct: 566 agagcccttggagactgtcacctt 543
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>dbj|AK066079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K21, full
           insert sequence
          Length = 1172

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
           |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 863 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 804

                                                                       
Query: 335 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
           ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 803 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 744

                                                   
Query: 395 tctgcacgttgggaggaagctcggtgaattcagggccctc 434
           ||||||| ||    || |||||||||||||||||||||||
Sbjct: 743 tctgcacattcaccggtagctcggtgaattcagggccctc 704



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 480 catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 655 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 596

                                   
Query: 540 agatcccttggagactatcacctt 563
           ||| |||||||||||| |||||||
Sbjct: 595 agagcccttggagactgtcacctt 572
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                           
Query: 480     catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
               ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 2374081 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 2374140

                                       
Query: 540     agatcccttggagactatcacctt 563
               ||| |||||||||||| |||||||
Sbjct: 2374141 agagcccttggagactgtcacctt 2374164



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                           
Query: 275     ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
               |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 2373781 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 2373840

                                                                           
Query: 335     gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
               ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 2373841 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 2373900

                      
Query: 395     tctgcac 401
               |||||||
Sbjct: 2373901 tctgcac 2373907



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 418     gtgaattcagggccctcaaaggggaatttctc 449
               |||||||||||||||||  | |||||||||||
Sbjct: 2374016 gtgaattcagggccctcgtaagggaatttctc 2374047
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 480    catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
              ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 103131 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 103190

                                      
Query: 540    agatcccttggagactatcacctt 563
              ||| |||||||||||| |||||||
Sbjct: 103191 agagcccttggagactgtcacctt 103214



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                          
Query: 275    ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
              |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 102831 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 102890

                                                                          
Query: 335    gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
              ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 102891 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 102950

                     
Query: 395    tctgcac 401
              |||||||
Sbjct: 102951 tctgcac 102957



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 418    gtgaattcagggccctcaaaggggaatttctc 449
              |||||||||||||||||  | |||||||||||
Sbjct: 103066 gtgaattcagggccctcgtaagggaatttctc 103097
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0019D06
          Length = 167405

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 480    catgtcgtcaatggtgatctcctcacgaaaggctgtgcaggtgaactcaaggtttgggcc 539
              ||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 157665 catgtcgtcgatggtgatctcctcacgaaaggctgtgcaggtgaactcaagtttgggccc 157724

                                      
Query: 540    agatcccttggagactatcacctt 563
              ||| |||||||||||| |||||||
Sbjct: 157725 agagcccttggagactgtcacctt 157748



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                          
Query: 275    ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
              |||| |||||||||||||||| ||||||||||||||| |||||||| | |||||||||||
Sbjct: 157365 ccttcagcttggtcatccacccgacgtactccttggtttgcttggtcaccatgtaatcgt 157424

                                                                          
Query: 335    gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
              ||||| |||||||||| | ||| || |  |||| |  ||||||| ||||||| |||||||
Sbjct: 157425 gcatgtagttggtggtcggcagagtgatccctctttgctccaggtacttgaataggccct 157484

                     
Query: 395    tctgcac 401
              |||||||
Sbjct: 157485 tctgcac 157491



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 418    gtgaattcagggccctcaaaggggaatttctc 449
              |||||||||||||||||  | |||||||||||
Sbjct: 157600 gtgaattcagggccctcgtaagggaatttctc 157631
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>gb|AY107101.1| Zea mays PCO079267 mRNA sequence
          Length = 1088

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttgagcttggtcatccaccggacgtactccttggtctgcttggtgatcatgtaatcgt 334
           |||| ||||| ||||||||||||| ||||||||  | |||||| || | |||||||||||
Sbjct: 875 ccttcagcttagtcatccaccggatgtactcctgagcctgcttagtcaccatgtaatcgt 816

                                                                       
Query: 335 gcatgaagttggtggttgtcagcgtcacacctcgtacctccaggaacttgaacaggccct 394
           ||||  ||||||| |  | |||||| || |||| |  ||||||| ||||||||||||| |
Sbjct: 815 gcatatagttggtagccgacagcgttacccctctttgctccaggtacttgaacaggcctt 756

                                                                   
Query: 395 tctgcacgttgggaggaagctcggtgaattcagggccctcaaaggggaatttctct 450
           |||| || ||   ||| ||||||||||| || ||||||||  ||||||| ||||||
Sbjct: 755 tctgaacattcacagggagctcggtgaactcggggccctcgtaggggaacttctct 700



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 460 tctgttttctctgctatcatcatgtcgtcaatggtgatctcctcacgaaaggctgtgcag 519
           |||||||||||  |||||| ||| || || |||||||||||||| || ||||||||||| 
Sbjct: 684 tctgttttctcaactatcagcatatcatcgatggtgatctcctcgcggaaggctgtgcat 625

                                                       
Query: 520 gtgaactcaaggtttgggccagatcccttggagactatcacctt 563
           |||||||| || |||||||||||  | ||||| |||| ||||||
Sbjct: 624 gtgaactcgagctttgggccagagtctttggaaactaccacctt 581
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>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence
          Length = 183724

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 94    agaacacaaatgaaactcactctgc 118
             ||||||||| |||||||||||||||
Sbjct: 49409 agaacacaactgaaactcactctgc 49433
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 459      ttctgttttctctgctatcat 479
                |||||||||||||||||||||
Sbjct: 29340991 ttctgttttctctgctatcat 29341011



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttctacaggatattttttca 78
             ||||||||||||||||||||
Sbjct: 20340 ttctacaggatattttttca 20359
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0597G07
          Length = 152928

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 459    ttctgttttctctgctatcat 479
              |||||||||||||||||||||
Sbjct: 129680 ttctgttttctctgctatcat 129700
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0034A04
          Length = 151263

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 459  ttctgttttctctgctatcat 479
            |||||||||||||||||||||
Sbjct: 3913 ttctgttttctctgctatcat 3933
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>ref|XM_476339.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2132

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   ttctacaggatattttttca 78
            ||||||||||||||||||||
Sbjct: 2070 ttctacaggatattttttca 2089
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>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence
          Length = 167235

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 460   tctgttttctctgctatcatcatg 483
             ||||||||||||||| ||||||||
Sbjct: 46690 tctgttttctctgctgtcatcatg 46713
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>gb|AY692706.1| Saccharomyces cerevisiae clone FLH111283.01X YIL042C gene, complete
           cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 agctgctgatacaggactac 140
           ||||||||||||||||||||
Sbjct: 125 agctgctgatacaggactac 144
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>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence
          Length = 183316

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    ggtgatcatgtaatcgtgca 337
              ||||||||||||||||||||
Sbjct: 111686 ggtgatcatgtaatcgtgca 111667
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>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    gaccaaacccttgagcttgg 286
              ||||||||||||||||||||
Sbjct: 147417 gaccaaacccttgagcttgg 147398
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     gaacaggcccttctgcacgt 403
               ||||||||||||||||||||
Sbjct: 1465186 gaacaggcccttctgcacgt 1465167
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>emb|AL157819.15| Human DNA sequence from clone RP11-480G1 on chromosome 13q13.1-14.3
             Contains a novel gene, complete sequence
          Length = 110911

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   ttcagggccctcaaagggga 442
             ||||||||||||||||||||
Sbjct: 20828 ttcagggccctcaaagggga 20809
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>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a novel
              gene, complete sequence
          Length = 148503

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ccagaagaacacaaatgaaa 108
              ||||||||||||||||||||
Sbjct: 121385 ccagaagaacacaaatgaaa 121366
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>emb|AL109921.21|HSDJ383J4 Human DNA sequence from clone RP3-383J4 on chromosome 1q24.1-24.3
             Contains two genes for novel proteins (FLJ10514) and two
             CpG islands, complete sequence
          Length = 133936

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   ctctgcatcaggttctgttt 466
             ||||||||||||||||||||
Sbjct: 80204 ctctgcatcaggttctgttt 80223
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>emb|Z46861.1|SC9905 S.cerevisiae chromosome IX cosmid 9905 and lambda 6569
          Length = 33954

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   agctgctgatacaggactac 140
             ||||||||||||||||||||
Sbjct: 11259 agctgctgatacaggactac 11240
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>tpg|BK003142.1| TPA: TPA_inf: Drosophila melanogaster HDC19000 (HDC19000) gene,
           complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ggtgatcatgtaatcgtgca 337
           ||||||||||||||||||||
Sbjct: 327 ggtgatcatgtaatcgtgca 346
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>gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, complete sequence
          Length = 132735

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   aaaggggaatttctctgcat 454
             ||||||||||||||||||||
Sbjct: 31491 aaaggggaatttctctgcat 31510
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>gb|AC018607.12| Homo sapiens chromosome 8, clone RP11-318K15, complete sequence
          Length = 189678

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    agctccagaagaacacaaat 104
             ||||||||||||||||||||
Sbjct: 67516 agctccagaagaacacaaat 67535
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>gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, complete sequence
          Length = 136843

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    aaaggggaatttctctgcat 454
              ||||||||||||||||||||
Sbjct: 109404 aaaggggaatttctctgcat 109423
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>gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosome 12, complete
             sequence
          Length = 155139

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tccagaagaacacaaatgaa 107
             ||||||||||||||||||||
Sbjct: 50953 tccagaagaacacaaatgaa 50972
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>gb|AC084481.1|CBRG02P14 Caenorhabditis briggsae cosmid G02P14, complete sequence
          Length = 43735

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 452  catcaggttctgttttctct 471
            ||||||||||||||||||||
Sbjct: 8719 catcaggttctgttttctct 8738
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttctacaggatattttttca 78
             ||||||||||||||||||||
Sbjct: 19639 ttctacaggatattttttca 19658
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>dbj|AK066040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048L15, full
            insert sequence
          Length = 2131

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   ttctacaggatattttttca 78
            ||||||||||||||||||||
Sbjct: 2069 ttctacaggatattttttca 2088
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>dbj|AK061192.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F08, full
            insert sequence
          Length = 1294

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   ttctacaggatattttttca 78
            ||||||||||||||||||||
Sbjct: 1259 ttctacaggatattttttca 1278
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>emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on chromosome 12, complete
            sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   tccagaagaacacaaatgaa 107
            ||||||||||||||||||||
Sbjct: 6198 tccagaagaacacaaatgaa 6217
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
              sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    ggtgatcatgtaatcgtgca 337
              ||||||||||||||||||||
Sbjct: 204055 ggtgatcatgtaatcgtgca 204074
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>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete
             sequence
          Length = 189040

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   ctctgcatcaggttctgttt 466
             ||||||||||||||||||||
Sbjct: 63032 ctctgcatcaggttctgttt 63051
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>dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             fosmid clone:OSJNOa219C16
          Length = 39990

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttctacaggatattttttca 78
             ||||||||||||||||||||
Sbjct: 20340 ttctacaggatattttttca 20359


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,476,475
Number of Sequences: 3902068
Number of extensions: 4476475
Number of successful extensions: 87893
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87743
Number of HSP's gapped (non-prelim): 138
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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