Clone Name | rbasd11d04 |
---|---|
Clone Library Name | barley_pub |
>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol| oxygenase) Length = 308 Score = 216 bits (550), Expect = 4e-56 Identities = 99/106 (93%), Positives = 102/106 (96%) Frame = -1 Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAY HLMN+ED Sbjct: 203 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYMHLMNDED 262 Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 KENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIEKYFP KL+W Sbjct: 263 KENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308
>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol| oxygenase 5) (AtMIOX5) Length = 314 Score = 207 bits (528), Expect = 1e-53 Identities = 94/106 (88%), Positives = 100/106 (94%) Frame = -1 Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412 SEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFIIRYHSFYPLHK GAYTHLMNEED Sbjct: 209 SEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSFYPLHKAGAYTHLMNEED 268 Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 KENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+KYFPE L+W Sbjct: 269 KENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314
>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol| oxygenase 4) (AtMIOX4) Length = 317 Score = 204 bits (518), Expect = 2e-52 Identities = 92/106 (86%), Positives = 98/106 (92%) Frame = -1 Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412 SEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FIIRYHSFYPLH G YTHLMNEED Sbjct: 212 SEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSFYPLHTAGEYTHLMNEED 271 Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 KENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+KYFPE L+W Sbjct: 272 KENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317
>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol| oxygenase 2) (AtMIOX2) Length = 317 Score = 201 bits (511), Expect = 1e-51 Identities = 90/106 (84%), Positives = 99/106 (93%) Frame = -1 Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412 +EGCGLDNVLMSWGHDDYMYLVAK+N TTLP AGLFIIRYHSFYPLHK GAYTHLMN+ED Sbjct: 212 TEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFYPLHKAGAYTHLMNDED 271 Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 +++LKWLHVFNKYDLYSKS V +DVE+VKPYY+SLI KYFP KLKW Sbjct: 272 RDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317
>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol| oxygenase 1) (AtMIOX1) Length = 311 Score = 195 bits (496), Expect = 7e-50 Identities = 88/106 (83%), Positives = 96/106 (90%) Frame = -1 Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412 +EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFIIRYHSFY LHK AY HLMN ED Sbjct: 206 TEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNED 265 Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 +EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL KYFP KLKW Sbjct: 266 RENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311
>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 278 Score = 144 bits (362), Expect = 2e-34 Identities = 62/103 (60%), Positives = 80/103 (77%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGLD VLMSWGHD+Y+Y V K NK T+P GL++IR+HSFYP H +G Y HL NE+D++ Sbjct: 176 CGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFYPWHSNGDYMHLCNEKDQQM 235 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+KS+ DVE++KPYY SLI+KY P L+W Sbjct: 236 LPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278
>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) Length = 282 Score = 127 bits (318), Expect = 3e-29 Identities = 56/103 (54%), Positives = 71/103 (68%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGL+N LMSWGHD+YMY + K NK +LP +IIR+HSFYP H G Y L NE+D Sbjct: 180 CGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFYPWHTGGDYRQLCNEQDLAM 239 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+K S DV++++PYY LI+KY P L W Sbjct: 240 LPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVLCW 282
>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) Length = 285 Score = 125 bits (314), Expect = 9e-29 Identities = 54/103 (52%), Positives = 72/103 (69%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGL+NVLMSWGHD+Y+Y + K NK +LPS ++IR+HSFYP H G Y L +++D + Sbjct: 183 CGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDM 242 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+K DVE ++PYY LI+KY P L W Sbjct: 243 LPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 285
>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 285 Score = 121 bits (304), Expect = 1e-27 Identities = 54/103 (52%), Positives = 69/103 (66%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSFYP H Y L +++D Sbjct: 183 CGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGSDYQQLCSQQDLAM 242 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+K DV+K++PYY LI+KY P L W Sbjct: 243 LPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285
>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 121 bits (303), Expect = 2e-27 Identities = 51/103 (49%), Positives = 72/103 (69%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGL+NVLMSWGHD+Y+Y + K NK +LPS +++R+HSFYP H G Y L +++D + Sbjct: 183 CGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFYPWHTGGDYRQLCSQQDLDM 242 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+K +V+ ++PYY LI+KY P L W Sbjct: 243 LPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGILSW 285
>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 120 bits (302), Expect = 2e-27 Identities = 54/103 (52%), Positives = 69/103 (66%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 CGLD VLMSWGHD+YMY V K NK +LP ++IR+HSFYP H Y L +++D Sbjct: 183 CGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDLAM 242 Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274 L W+ FNK+DLY+K DV+K++PYY LI+KY P L W Sbjct: 243 LPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285
>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)| Length = 450 Score = 32.3 bits (72), Expect = 1.1 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -1 Query: 579 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 409 G+ LM W H + +E L P GLF++R + YP G YT ++ E K Sbjct: 74 GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125 Query: 408 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 295 V + +YS S + ID E M L+E Y Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156
>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 908 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = -1 Query: 477 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 298 R FY L K Y + K +H+ KYDL SK+ ID+ ++ + EK Sbjct: 12 RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65 Query: 297 YFPE 286 Y P+ Sbjct: 66 YMPK 69
>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 776 Score = 30.4 bits (67), Expect = 4.0 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -1 Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403 C ++NV+M D + +A ENK L A II + FY + Y +++ED+E+ Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438 Query: 402 LKWL 391 K L Sbjct: 439 NKML 442
>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)| Length = 172 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -1 Query: 438 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 319 Y L+N +KE L +HV K+D + +V R++ E V+ Y Sbjct: 88 YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128
>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference| protein 2) (Ras inhibitor JC265) (Ras association domain family 4) Length = 895 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = -1 Query: 411 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 283 KENL+ + N +L ++ + +DVEK+K +M++ + Y PEK Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669
>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja| UDPGD intein] Length = 895 Score = 29.3 bits (64), Expect = 8.9 Identities = 21/86 (24%), Positives = 41/86 (47%) Frame = -1 Query: 549 HDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYD 370 + Y+Y V EN + S G+ I H+ +P L+ + + N++ + + D Sbjct: 690 YSGYVYSVETENSLLITSYGILI---HNCFPKDVKA----LIKQFENNNIEPI-LIKATD 741 Query: 369 LYSKSSVRIDVEKVKPYYMSLIEKYF 292 + ++ ++ EK+K YY +L K F Sbjct: 742 IVNEEQIKWFFEKIKNYYGNLNGKTF 767 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,051,138 Number of Sequences: 219361 Number of extensions: 1537005 Number of successful extensions: 4144 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4144 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)