ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (... 216 4e-56
2MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-in... 207 1e-53
3MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-in... 204 2e-52
4MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-in... 201 1e-51
5MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-in... 195 7e-50
6MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 144 2e-34
7MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 127 3e-29
8MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 125 9e-29
9MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 121 1e-27
10MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inosito... 121 2e-27
11MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inosi... 120 2e-27
12CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-... 32 1.1
13SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1... 32 1.1
14TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 30 4.0
15GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor) 30 5.2
16RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/in... 30 5.2
17Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [C... 29 8.9

>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol|
           oxygenase)
          Length = 308

 Score =  216 bits (550), Expect = 4e-56
 Identities = 99/106 (93%), Positives = 102/106 (96%)
 Frame = -1

Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412
           SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAY HLMN+ED
Sbjct: 203 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYMHLMNDED 262

Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           KENLKWL VFNKYDLYSKS+ RIDVEKVKPYYMSLIEKYFP KL+W
Sbjct: 263 KENLKWLRVFNKYDLYSKSNERIDVEKVKPYYMSLIEKYFPAKLRW 308



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>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 5) (AtMIOX5)
          Length = 314

 Score =  207 bits (528), Expect = 1e-53
 Identities = 94/106 (88%), Positives = 100/106 (94%)
 Frame = -1

Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412
           SEGCGL+NVLMSWGHDDYMYLVAKEN +TLPS GLFIIRYHSFYPLHK GAYTHLMNEED
Sbjct: 209 SEGCGLENVLMSWGHDDYMYLVAKENGSTLPSPGLFIIRYHSFYPLHKAGAYTHLMNEED 268

Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           KENLKWLHVFNKYDLYSKS V ++VEKVKPYYMSLI+KYFPE L+W
Sbjct: 269 KENLKWLHVFNKYDLYSKSKVHVNVEKVKPYYMSLIKKYFPENLRW 314



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>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 4) (AtMIOX4)
          Length = 317

 Score =  204 bits (518), Expect = 2e-52
 Identities = 92/106 (86%), Positives = 98/106 (92%)
 Frame = -1

Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412
           SEGCGL+NV+MSWGHDDYMYLVAKEN +TLPSAG FIIRYHSFYPLH  G YTHLMNEED
Sbjct: 212 SEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYHSFYPLHTAGEYTHLMNEED 271

Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           KENLKWLHVFNKYDLYSKS V +DVEKVKPYYMSLI+KYFPE L+W
Sbjct: 272 KENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIKKYFPENLRW 317



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>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 2) (AtMIOX2)
          Length = 317

 Score =  201 bits (511), Expect = 1e-51
 Identities = 90/106 (84%), Positives = 99/106 (93%)
 Frame = -1

Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412
           +EGCGLDNVLMSWGHDDYMYLVAK+N TTLP AGLFIIRYHSFYPLHK GAYTHLMN+ED
Sbjct: 212 TEGCGLDNVLMSWGHDDYMYLVAKKNGTTLPHAGLFIIRYHSFYPLHKAGAYTHLMNDED 271

Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           +++LKWLHVFNKYDLYSKS V +DVE+VKPYY+SLI KYFP KLKW
Sbjct: 272 RDDLKWLHVFNKYDLYSKSKVLVDVEQVKPYYISLINKYFPAKLKW 317



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>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol|
           oxygenase 1) (AtMIOX1)
          Length = 311

 Score =  195 bits (496), Expect = 7e-50
 Identities = 88/106 (83%), Positives = 96/106 (90%)
 Frame = -1

Query: 591 SEGCGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEED 412
           +EGCGLDNVLMSWGHDDYMYLVAKEN+TTLPSAGLFIIRYHSFY LHK  AY HLMN ED
Sbjct: 206 TEGCGLDNVLMSWGHDDYMYLVAKENQTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNED 265

Query: 411 KENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           +EN+KWL VFNKYDLYSKS VR++VE+VKPYY+SL  KYFP KLKW
Sbjct: 266 RENMKWLKVFNKYDLYSKSKVRVNVEEVKPYYLSLTNKYFPSKLKW 311



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>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 278

 Score =  144 bits (362), Expect = 2e-34
 Identities = 62/103 (60%), Positives = 80/103 (77%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGLD VLMSWGHD+Y+Y V K NK T+P  GL++IR+HSFYP H +G Y HL NE+D++ 
Sbjct: 176 CGLDKVLMSWGHDEYLYRVMKFNKCTIPEEGLYMIRFHSFYPWHSNGDYMHLCNEKDQQM 235

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+KS+   DVE++KPYY SLI+KY P  L+W
Sbjct: 236 LPWVKEFNKFDLYTKSTELPDVERLKPYYQSLIDKYCPGVLQW 278



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>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6)
          Length = 282

 Score =  127 bits (318), Expect = 3e-29
 Identities = 56/103 (54%), Positives = 71/103 (68%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGL+N LMSWGHD+YMY + K NK +LP    +IIR+HSFYP H  G Y  L NE+D   
Sbjct: 180 CGLENALMSWGHDEYMYQMMKFNKFSLPGEAFYIIRFHSFYPWHTGGDYRQLCNEQDLAM 239

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+K S   DV++++PYY  LI+KY P  L W
Sbjct: 240 LPWVQEFNKFDLYTKGSDMPDVDELRPYYQGLIDKYCPGVLCW 282



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>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase)
          Length = 285

 Score =  125 bits (314), Expect = 9e-29
 Identities = 54/103 (52%), Positives = 72/103 (69%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGL+NVLMSWGHD+Y+Y + K NK +LPS   ++IR+HSFYP H  G Y  L +++D + 
Sbjct: 183 CGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDM 242

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+K     DVE ++PYY  LI+KY P  L W
Sbjct: 243 LPWVQEFNKFDLYTKCPDLPDVESLRPYYQGLIDKYCPGTLSW 285



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>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
          Length = 285

 Score =  121 bits (304), Expect = 1e-27
 Identities = 54/103 (52%), Positives = 69/103 (66%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HSFYP H    Y  L +++D   
Sbjct: 183 CGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGSDYQQLCSQQDLAM 242

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+K     DV+K++PYY  LI+KY P  L W
Sbjct: 243 LPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285



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>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  121 bits (303), Expect = 2e-27
 Identities = 51/103 (49%), Positives = 72/103 (69%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGL+NVLMSWGHD+Y+Y + K NK +LPS   +++R+HSFYP H  G Y  L +++D + 
Sbjct: 183 CGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFYPWHTGGDYRQLCSQQDLDM 242

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+K     +V+ ++PYY  LI+KY P  L W
Sbjct: 243 LPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGILSW 285



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>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)|
           (Aldehyde reductase-like 6) (Renal-specific
           oxidoreductase) (Kidney-specific protein 32)
          Length = 285

 Score =  120 bits (302), Expect = 2e-27
 Identities = 54/103 (52%), Positives = 69/103 (66%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           CGLD VLMSWGHD+YMY V K NK +LP    ++IR+HSFYP H    Y  L +++D   
Sbjct: 183 CGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDLAM 242

Query: 402 LKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKYFPEKLKW 274
           L W+  FNK+DLY+K     DV+K++PYY  LI+KY P  L W
Sbjct: 243 LPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285



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>CSK_CHICK (P41239) Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase)|
          Length = 450

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = -1

Query: 579 GLDNVLMSWGHDDYMYLVAKENKTTL---PSAGLFIIRYHSFYPLHKHGAYTHLMNEEDK 409
           G+   LM W H      + +E    L   P  GLF++R  + YP    G YT  ++ E K
Sbjct: 74  GIKLSLMPWFHGK----ITREQAERLLYPPETGLFLVRESTNYP----GDYTLCVSCEGK 125

Query: 408 ENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEKY 295
                  V +   +YS S + ID E      M L+E Y
Sbjct: 126 -------VEHYRIIYSSSKLSIDEEVYFENLMQLVEHY 156



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>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 908

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -1

Query: 477 RYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYDLYSKSSVRIDVEKVKPYYMSLIEK 298
           R   FY L K   Y        +   K +H+  KYDL SK+   ID+      ++ + EK
Sbjct: 12  RLDKFYRLAKEQGY------RARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEK 65

Query: 297 YFPE 286
           Y P+
Sbjct: 66  YMPK 69



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>TOP1_RICPR (Q9ZDK2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 776

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = -1

Query: 582 CGLDNVLMSWGHDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKEN 403
           C ++NV+M    D  +  +A ENK  L  A   II +  FY +     Y   +++ED+E+
Sbjct: 388 CQMENVIM----DLVIANLASENKEYLAKANGSIIAFDGFYKV-----YRESLDDEDEED 438

Query: 402 LKWL 391
            K L
Sbjct: 439 NKML 442



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>GRPE_THEMA (Q9WZV4) Protein grpE (HSP-70 cofactor)|
          Length = 172

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 438 YTHLMNEEDKENLKWLHVFNKYDLYSKSSV-RIDVEKVKPY 319
           Y  L+N  +KE L  +HV  K+D +   +V R++ E V+ Y
Sbjct: 88  YKKLLNVLEKEGLTKIHVGEKFDPFEHEAVERVETEDVEEY 128



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>RIN2_HUMAN (Q8WYP3) Ras and Rab interactor 2 (Ras interaction/interference|
           protein 2) (Ras inhibitor JC265) (Ras association domain
           family 4)
          Length = 895

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 411 KENLKWLHVFNKYDL--YSKSSVRIDVEKVKPYYMSLIEKYFPEK 283
           KENL+ +   N  +L  ++ +   +DVEK+K  +M++ + Y PEK
Sbjct: 625 KENLQLVRQRNPQELGVFAPTPDFVDVEKIKVKFMTMQKMYSPEK 669



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>Y1054_METJA (Q58454) Hypothetical protein MJ1054 (EC 1.1.1.-) [Contains: Mja|
           UDPGD intein]
          Length = 895

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -1

Query: 549 HDDYMYLVAKENKTTLPSAGLFIIRYHSFYPLHKHGAYTHLMNEEDKENLKWLHVFNKYD 370
           +  Y+Y V  EN   + S G+ I   H+ +P         L+ + +  N++ + +    D
Sbjct: 690 YSGYVYSVETENSLLITSYGILI---HNCFPKDVKA----LIKQFENNNIEPI-LIKATD 741

Query: 369 LYSKSSVRIDVEKVKPYYMSLIEKYF 292
           + ++  ++   EK+K YY +L  K F
Sbjct: 742 IVNEEQIKWFFEKIKNYYGNLNGKTF 767


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,051,138
Number of Sequences: 219361
Number of extensions: 1537005
Number of successful extensions: 4144
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4144
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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