ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd11c20 |
|---|---|
| Clone Library Name | barley_pub |
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 229 bits (583), Expect = 6e-60 Identities = 113/129 (87%), Positives = 123/129 (95%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSDFLAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA Sbjct: 279 VQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 338 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHRAKLDDNA+LL+F +KLE AC+G VE+GKMTKDLAL++HG SK++R YLNTE Sbjct: 339 WTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHG-SKLSREHYLNTE 397 Query: 250 EFIDAVAAE 224 EFIDAVAAE Sbjct: 398 EFIDAVAAE 406
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 229 bits (583), Expect = 6e-60 Identities = 114/129 (88%), Positives = 122/129 (94%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSDFLAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA Sbjct: 299 VQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 358 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHRAKLDDNA LL+F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTE Sbjct: 359 WTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDLALILHG-SKLSREHYLNTE 417 Query: 250 EFIDAVAAE 224 EFIDAVAAE Sbjct: 418 EFIDAVAAE 426
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 222 bits (566), Expect = 6e-58 Identities = 110/129 (85%), Positives = 120/129 (93%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSDFLAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFA Sbjct: 278 VQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFA 337 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDLAL++HG SK++R YLNTE Sbjct: 338 WTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIHG-SKLSRDHYLNTE 396 Query: 250 EFIDAVAAE 224 EFIDAVA E Sbjct: 397 EFIDAVADE 405
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 219 bits (559), Expect = 4e-57 Identities = 108/129 (83%), Positives = 118/129 (91%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSDFLAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFA Sbjct: 278 VQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFA 337 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDLAL++ SK++R YLNTE Sbjct: 338 WTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTE 397 Query: 250 EFIDAVAAE 224 EFIDAVA E Sbjct: 398 EFIDAVADE 406
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 185 bits (470), Expect = 8e-47 Identities = 89/124 (71%), Positives = 105/124 (84%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFA Sbjct: 276 VQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 W+RGLAHRA+LD+N L FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT Sbjct: 336 WSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTF 395 Query: 250 EFID 239 EF+D Sbjct: 396 EFMD 399
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 185 bits (470), Expect = 8e-47 Identities = 89/124 (71%), Positives = 105/124 (84%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRH+R+HQKG ETSTN IASIFA Sbjct: 276 VQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 W+RGLAHRA+LD+N L FA+ LEE C+ T+E+G MTKDLA + G V RSDYLNT Sbjct: 336 WSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTF 395 Query: 250 EFID 239 EF+D Sbjct: 396 EFMD 399
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 184 bits (466), Expect = 2e-46 Identities = 89/124 (71%), Positives = 104/124 (83%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFA Sbjct: 276 VQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 W+RGLAHRAKLD+N L FA LEE C+ T+E+G MTKDLA + G V RSDYLNT Sbjct: 336 WSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTF 395 Query: 250 EFID 239 EF+D Sbjct: 396 EFMD 399
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 183 bits (464), Expect = 4e-46 Identities = 88/124 (70%), Positives = 105/124 (84%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFA Sbjct: 276 VQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 W+RGLAHRAKLD+N L FA+ LE+ C+ T+E+G MTKDLA + G V RSDYLNT Sbjct: 336 WSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTF 395 Query: 250 EFID 239 EF+D Sbjct: 396 EFMD 399
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 183 bits (464), Expect = 4e-46 Identities = 92/127 (72%), Positives = 103/127 (81%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD LAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFA Sbjct: 284 VQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFA 343 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNT 254 WTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT Sbjct: 344 WTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNT 403 Query: 253 EEFIDAV 233 +F+D + Sbjct: 404 SDFLDTI 410
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 183 bits (464), Expect = 4e-46 Identities = 92/127 (72%), Positives = 103/127 (81%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD LAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFA Sbjct: 315 VQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFA 374 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNT 254 WTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT Sbjct: 375 WTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNT 434 Query: 253 EEFIDAV 233 +F+D + Sbjct: 435 SDFLDTI 441
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 182 bits (463), Expect = 5e-46 Identities = 92/127 (72%), Positives = 103/127 (81%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD LAQGFGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TSTN IASIFA Sbjct: 315 VQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFA 374 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNT 254 WTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDLA +HG S V ++ +LNT Sbjct: 375 WTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNT 434 Query: 253 EEFIDAV 233 +F+D + Sbjct: 435 TDFLDTI 441
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 181 bits (460), Expect = 1e-45 Identities = 89/124 (71%), Positives = 103/124 (83%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRH+R++QKG ETSTN IASIFA Sbjct: 276 VQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHRAKLD+N L FA LEE + T+E+G MTKDLA + G V RSDYLNT Sbjct: 336 WTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTF 395 Query: 250 EFID 239 EF+D Sbjct: 396 EFMD 399
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 167 bits (423), Expect = 2e-41 Identities = 87/127 (68%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD LA FGSLGLMTSVL+CPDGKTIEAEAAHGTVTRH+R HQKG TST IASIFA Sbjct: 387 VQSDILASRFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTKGIASIFA 446 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSD-YLNT 254 WTRGL HR KLD N L+ FAQ E+ CV TVE G MTKDLA +HG S V ++ +LNT Sbjct: 447 WTRGLEHRGKLDGNQDLIRFAQTREKVCVQTVE-GAMTKDLAGCIHGLSNVKLNEHFLNT 505 Query: 253 EEFIDAV 233 +F+D + Sbjct: 506 TDFLDTI 512
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 167 bits (422), Expect = 3e-41 Identities = 84/127 (66%), Positives = 99/127 (77%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLGLMTSVLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFA Sbjct: 279 VQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFA 338 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGL HR KLD +++FA KLE + TVESGKMTKDLA+L+ D+LN+E Sbjct: 339 WTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSE 393 Query: 250 EFIDAVA 230 EF+DA+A Sbjct: 394 EFLDAIA 400
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 167 bits (422), Expect = 3e-41 Identities = 84/127 (66%), Positives = 99/127 (77%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQG+GSLGLMTSVLM DGKT+EAEAAHGTVTRH+R +Q G TSTN IASIFA Sbjct: 279 VQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFA 338 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGL HR KLD +++FA KLE + TVESGKMTKDLA+L+ D+LN+E Sbjct: 339 WTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSE 393 Query: 250 EFIDAVA 230 EF+DA+A Sbjct: 394 EFLDAIA 400
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 164 bits (415), Expect = 2e-40 Identities = 87/128 (67%), Positives = 100/128 (78%), Gaps = 1/128 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTS LM PDGK EAEAAHGTVTRH+R HQ+G ETSTNSIASIFA Sbjct: 301 VQSDIVAQGFGSLGLMTSALMTPDGKAYEAEAAHGTVTRHYRQHQQGKETSTNSIASIFA 360 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNT 254 WTRGLA R KLD+ +++FA KLE+A + TVE + MTKDLAL + K RS Y+ T Sbjct: 361 WTRGLAQRGKLDETPDVVDFASKLEQATIDTVEVDRIMTKDLALAM---GKTDRSAYVTT 417 Query: 253 EEFIDAVA 230 EF+DAVA Sbjct: 418 TEFLDAVA 425
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 162 bits (411), Expect = 5e-40 Identities = 87/127 (68%), Positives = 100/127 (78%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 V+SD +AQGFGSLGLMTSVL+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFA Sbjct: 276 VESDIVAQGFGSLGLMTSVLITPDGKTFESEAAHGTVTRHFRQHQQGKETSTNSIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNT 254 WTRG+ R KLD+ +++F Q LE A V TV E G MTKDLAL++ K RS Y+ T Sbjct: 336 WTRGIIQRGKLDNTPDVVKFGQILESATVNTVQEDGIMTKDLALIL---GKSERSAYVTT 392 Query: 253 EEFIDAV 233 EEFIDAV Sbjct: 393 EEFIDAV 399
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 162 bits (410), Expect = 7e-40 Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 1/128 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTS+L+ PDGKT E+EAAHGTVTRHFR HQ+G ETSTNSIASIFA Sbjct: 276 VQSDIVAQGFGSLGLMTSILITPDGKTFESEAAHGTVTRHFRKHQRGEETSTNSIASIFA 335 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVE-SGKMTKDLALLVHGSSKVTRSDYLNT 254 WTR + R KLD+ +++F LE+A + TV+ GKMTKDLAL++ K RS Y+ T Sbjct: 336 WTRAIIQRGKLDNTDDVIKFGNLLEKATLDTVQVGGKMTKDLALML---GKTNRSSYVTT 392 Query: 253 EEFIDAVA 230 EEFID VA Sbjct: 393 EEFIDEVA 400
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 160 bits (406), Expect = 2e-39 Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 1/128 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTSVL+ PDGK E+EAAHGTVTRH+R HQ+G ETSTNSIASI+A Sbjct: 277 VQSDIVAQGFGSLGLMTSVLVTPDGKAFESEAAHGTVTRHYRQHQQGKETSTNSIASIYA 336 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNT 254 WTRGL R KLDD +++FA++LE+A + TV MTKDLAL K RS Y+ T Sbjct: 337 WTRGLIQRGKLDDTPEVVKFAEELEKAVIETVSKDNIMTKDLALT---QGKTDRSSYVTT 393 Query: 253 EEFIDAVA 230 EEFID VA Sbjct: 394 EEFIDGVA 401
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 158 bits (399), Expect = 1e-38 Identities = 78/126 (61%), Positives = 97/126 (76%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTSVL+ PDGKT+EAEAAHGTVTRH+R HQ+G TSTN IASIFA Sbjct: 274 VQSDTVAQGFGSLGLMTSVLLSPDGKTVEAEAAHGTVTRHYRQHQQGKATSTNPIASIFA 333 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WT+GL+ R K DD +++FA+ LE+ C+ TVE G MTKDLALL+ ++ TE Sbjct: 334 WTQGLSFRGKFDDTPDVVKFAETLEQVCIKTVEGGAMTKDLALLIGPDQA-----WMTTE 388 Query: 250 EFIDAV 233 +F +A+ Sbjct: 389 QFFEAI 394
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 153 bits (386), Expect = 4e-37 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTS+L+ PDGKT E+EAAHGTVTRH+R +QKG ETSTNSIASIFA Sbjct: 293 VQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHYRKYQKGEETSTNSIASIFA 352 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNT 254 W+RGL R +LD+ L +FA LE A + TV + G MTKDLAL + RS Y+ T Sbjct: 353 WSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLALACGNNE---RSAYVTT 409 Query: 253 EEFIDAV 233 EEF+DAV Sbjct: 410 EEFLDAV 416
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 150 bits (379), Expect = 3e-36 Identities = 79/129 (61%), Positives = 97/129 (75%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 V SD +AQ +GSLGLMTSVL+ P+G+T E+EAAHGTV RH+ + KG +TSTNSIASIFA Sbjct: 286 VMSDVVAQAYGSLGLMTSVLIHPNGRTFESEAAHGTVQRHYMQYLKGKKTSTNSIASIFA 345 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLNTE 251 WTRGLAHR +LD N RL++FA LE ACV VE G MTKDL LL + + Y++T Sbjct: 346 WTRGLAHRGRLDGNERLVKFANALEHACVRCVEKGIMTKDLYLL-----SKSPNGYVDTF 400 Query: 250 EFIDAVAAE 224 EF+DAV +E Sbjct: 401 EFLDAVKSE 409
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 143 bits (360), Expect = 4e-34 Identities = 75/127 (59%), Positives = 92/127 (72%), Gaps = 1/127 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 VQSD +AQGFGSLGLMTS L+ P G+ E+EAAHGTVTRH+R HQKG ETSTN IASIFA Sbjct: 363 VQSDIVAQGFGSLGLMTSTLVTPTGEAFESEAAHGTVTRHYREHQKGRETSTNPIASIFA 422 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKDLALLVHGSSKVTRSDYLNT 254 WTRGL R KLD+ ++ FA++LE AC+ V + G MTKDLAL + R ++ T Sbjct: 423 WTRGLIQRGKLDETPDVVTFAEELERACIEVVNDEGIMTKDLAL---ACGRKEREAWVTT 479 Query: 253 EEFIDAV 233 E++ AV Sbjct: 480 REYMAAV 486
>IDH3A_RAT (Q99NA5) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 35.0 bits (79), Expect = 0.17 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 + SD A G LG+ S + +G I E+ HGT G+ N A + + Sbjct: 258 ILSDLCAGLIGGLGVTQSGNIGANGVAI-FESVHGTAP------DIAGKDMANPTALLLS 310 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNT 254 L H L + A K+E AC T++ GK +TKDL G+SK SD+ T Sbjct: 311 AVMMLRHMG-------LFDHAAKIEAACFATIKDGKSLTKDLG----GNSKC--SDF--T 355 Query: 253 EE 248 EE Sbjct: 356 EE 357
>IDH3A_BOVIN (P41563) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) (Isocitrate dehydrogenase subunits 3/4) Length = 366 Score = 35.0 bits (79), Expect = 0.17 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 + SD A G LG+ S + +G I E+ HGT G+ N A + + Sbjct: 258 ILSDLCAGLIGGLGVTPSGNIGANGVAI-FESVHGTAP------DIAGKDMANPTALLLS 310 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNT 254 L H L + A K+E AC T++ GK +TKDL G+SK SD+ T Sbjct: 311 AVMMLRHMG-------LFDHAAKIETACFATIKDGKSLTKDLG----GNSKC--SDF--T 355 Query: 253 EE 248 EE Sbjct: 356 EE 357
>IDH3A_MOUSE (Q9D6R2) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 34.3 bits (77), Expect = 0.29 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 + SD A G LG+ S + +G I E+ HGT G+ N A + + Sbjct: 258 ILSDLCAGLIGGLGVTPSGNIGANGVAI-FESVHGTAP------DIAGKDMANPTALLLS 310 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKDL 308 L H L + A K+E AC T++ GK +TKDL Sbjct: 311 AVMMLRHMG-------LFDHAAKIEAACFATIKDGKSLTKDL 345
>LEU3_CAMJR (Q5HS77) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 358 Score = 32.3 bits (72), Expect = 1.1 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 2/128 (1%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVT--RHFRVHQKGGETSTNSIASI 437 + SD LA GSLGL++S + G + E A G+ H + N IA I Sbjct: 246 ILSDELAAINGSLGLLSSASLNDKGFGLY-EPAGGSAPDIAHLNI--------ANPIAQI 296 Query: 436 FAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLN 257 + L + K + + AQ +E A + GKMTKDL YLN Sbjct: 297 LSAALMLKYSFKEE------QAAQDIENAISLALAQGKMTKDL----------NAKSYLN 340 Query: 256 TEEFIDAV 233 T+E D + Sbjct: 341 TDEMGDCI 348
>LEU3_CAMJE (Q9PLW0) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 358 Score = 32.3 bits (72), Expect = 1.1 Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 2/128 (1%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVT--RHFRVHQKGGETSTNSIASI 437 + SD LA GSLGL++S + G + E A G+ H + N IA I Sbjct: 246 ILSDELAAINGSLGLLSSASLNDKGFGLY-EPAGGSAPDIAHLNI--------ANPIAQI 296 Query: 436 FAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLVHGSSKVTRSDYLN 257 + L + K + + AQ +E A + GKMTKDL YLN Sbjct: 297 LSAALMLKYSFKEE------QAAQDIENAISLALAQGKMTKDL----------NAKSYLN 340 Query: 256 TEEFIDAV 233 T+E D + Sbjct: 341 TDEMGDCI 348
>ATG16_XENTR (Q5I0B9) Autophagy-related protein 16 (APG16-like 1)| Length = 537 Score = 32.0 bits (71), Expect = 1.4 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTV-------TRHFRVHQKGGETSTN 452 VQ F A GF T V+ PDG + A +A GT+ + R+ K +S N Sbjct: 452 VQQTFSAPGFKCGSDWTRVIFSPDGSYVSAGSAEGTLYFWNVLTGKVERMFSKQHSSSIN 511 Query: 451 SIASIFAWTRGLAHRAKLDDNAR 383 ++ AW+ H +D +R Sbjct: 512 AV----AWSPSGTHVVSVDKGSR 530
>INHBA_SHEEP (P43032) Inhibin beta A chain precursor (Activin beta-A chain)| Length = 425 Score = 30.4 bits (67), Expect = 4.2 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = -1 Query: 523 AEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTR-GLAHRAKLDDNARLLEFAQKLEEAC 347 AE+ T HF + Q+G + S A I+ + + A+R + RL + + L+ Sbjct: 127 AESGTARKTLHFEISQEGSDLSVVERAEIWLFLKVPKANRTRSKVTIRLFQQQKHLQ--- 183 Query: 346 VGTVESGKMTKDLALLVHGSSKVTRSDYLNTEEFIDA 236 G++++G+ +++ L K +S+ L +E+ +DA Sbjct: 184 -GSLDAGEEAEEVGL------KGEKSEMLISEKVVDA 213
>Y1185_METJA (Q58585) Hypothetical protein MJ1185| Length = 622 Score = 30.0 bits (66), Expect = 5.5 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -2 Query: 543 LMVKQSKPKLPMAQSLVISVFTRKVVKPAQTALLPSLLGQEDLHTGQS*TTTLDFLNLHR 364 L+V+ K +LP+ ++L I F RK +KP L+ LLG ED+ D +NL+R Sbjct: 504 LVVESIKLELPI-ENLGICRFHRKWLKPVLKELVKELLGIEDI--------VEDSINLYR 554 Query: 363 NL 358 + Sbjct: 555 EI 556
>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150) (Fragment) Length = 1324 Score = 29.6 bits (65), Expect = 7.2 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -1 Query: 502 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 350 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVSRTIQNNFFDSSKQEAID 477 Query: 349 ---CVGTVESGKMTKDLALLVHGSSKVT 275 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>TPM1_SCHMA (P42637) Tropomyosin 1 (TMI) (Polypeptide 49)| Length = 284 Score = 29.3 bits (64), Expect = 9.4 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -1 Query: 529 IEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDD----NARLLEFAQK 362 I+ + A T+ ++ + +TN+ A + A TR + R +D ++RL E K Sbjct: 55 IDCDEAQETLQEQMNKLEETDKRATNAEAEVAAMTRRI--RLLEEDLEVSSSRLTETLTK 112 Query: 361 LEEACVGTVESGKMTKDLAL 302 LEEA ES + KDL + Sbjct: 113 LEEASKTAEESERGRKDLEI 132
>LEU3_ZYMMO (Q5NPQ9) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 349 Score = 29.3 bits (64), Expect = 9.4 Identities = 26/101 (25%), Positives = 44/101 (43%) Frame = -1 Query: 610 VQSDFLAQGFGSLGLMTSVLMCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFA 431 + SD + GS+GL+ S + +GK + E HG+ G N +A+I + Sbjct: 244 ILSDLASACVGSIGLLPSASLNSEGKGL-YEPIHGSAP------DIAGLGKANPLATILS 296 Query: 430 WTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 308 L + K + + A ++E+A +E G T DL Sbjct: 297 GAMMLRYSLKREAD------ADRIEKAVSTALEKGARTADL 331
>FST_BRARE (Q9YHV4) Follistatin precursor (FS) (Activin-binding protein)| Length = 322 Score = 29.3 bits (64), Expect = 9.4 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +2 Query: 410 VCKSSCPSKDGSNAVCAGFTTFLVNTEMTSDCAM 511 VC SCP AVCA NT S+CAM Sbjct: 272 VCAESCPESRSEEAVCAS-----DNTTYPSECAM 300
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.3 bits (64), Expect = 9.4 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -1 Query: 502 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 350 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 349 ---CVGTVESGKMTKDLALLVHGSSKVT 275 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.3 bits (64), Expect = 9.4 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -1 Query: 502 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 350 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 349 ---CVGTVESGKMTKDLALLVHGSSKVT 275 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 29.3 bits (64), Expect = 9.4 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Frame = -1 Query: 502 VTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLE-------FAQKLEEA-- 350 VTR V + + +SI+ I+A T L +AKL D AR + F +EA Sbjct: 418 VTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAID 477 Query: 349 ---CVGTVESGKMTKDLALLVHGSSKVT 275 T+ S K ALL GS +V+ Sbjct: 478 VLLLGNTLNSDLADKARALLTTGSLRVS 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,749,260 Number of Sequences: 219361 Number of extensions: 1444278 Number of successful extensions: 3788 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3691 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3774 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
