Clone Name	rbasd11c17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase prec...	678	0.0
2	ref|XM_464007.1| Oryza sativa (japonica cultivar-group), mRNA	438	e-119
3	dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clon...	438	e-119
4	gb|AY103737.1| Zea mays PCO126068 mRNA sequence	307	3e-80
5	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
6	dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
7	gb|BT013928.1| Lycopersicon esculentum clone 132926R, mRNA sequence	48	0.039
8	emb|X74296.1|GMATPSYNS G.max gene for ATP synthase subunit	44	0.61
9	emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom...	42	2.4
10	gb|AC068913.22| Mus musculus strain 129/Sv clone ct7-362c13 map ...	42	2.4
11	dbj|AK061919.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.4
12	gb|AC025366.11| Homo sapiens chromosome 8, clone RP11-238I10, co...	42	2.4
13	gb|AC068911.38| Mus musculus strain 129/Sv chromosome 2 clone ct...	42	2.4
14	gb|AC112719.4| Homo sapiens BAC clone RP11-630D6 from 4, complet...	42	2.4
15	gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complet...	42	2.4
16	gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cance...	42	2.4
17	gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325...	42	2.4
18	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.4
19	emb|BX908734.3| Mouse DNA sequence from clone RP23-266F3 on chro...	42	2.4
20	gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C...	42	2.4
21	gb|AC090819.7| Homo sapiens chromosome 8, clone CTD-2544L4, comp...	42	2.4
22	dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome	42	2.4
23	dbj|AK073546.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.4
24	dbj|AK072146.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.4
25	emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on ch...	42	2.4
26	gb|AY609461.1| Sus scrofa clone Clu_12354.scr.msk.p1.Contig4, mR...	42	2.4
27	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	42	2.4
28	emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa...	42	2.4
29	emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chrom...	42	2.4
30	emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chr...	42	2.4
31	dbj|AP003547.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	42	2.4
32	dbj|AP003693.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	42	2.4
33	gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone R...	40	9.5
34	gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Canc...	40	9.5
35	ref|XM_748618.1| Aspergillus fumigatus Af293 hypothetical protei...	40	9.5
36	gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome...	40	9.5
37	emb|Z68012.1|CET24D5 Caenorhabditis elegans Cosmid T24D5, comple...	40	9.5
38	gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosom...	40	9.5
39	ref|XM_671916.1| Plasmodium berghei strain ANKA fructose-bisphos...	40	9.5
40	gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete se...	40	9.5
41	emb|AL590308.8| Human DNA sequence from clone RP11-501K14 on chr...	40	9.5
42	emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chr...	40	9.5
43	emb|AL354941.10| Human DNA sequence from clone RP11-62E14 on chr...	40	9.5
44	emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chr...	40	9.5
45	gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp...	40	9.5
46	gb|AY046926.1| Lactococcus lactis subsp. cremoris YdjD (ydjD), N...	40	9.5
47	dbj|AK128488.1| Homo sapiens cDNA FLJ46636 fis, clone TRACH3002188	40	9.5
48	gb|AC104664.2| Homo sapiens BAC clone RP11-724H6 from 4, complet...	40	9.5
49	gb|AC008790.7| Homo sapiens chromosome 5 clone CTD-2040H20, comp...	40	9.5
50	gb|AF247062.1|AF247062 Plasmodium berghei QIMR fructose 1,6-bisp...	40	9.5
51	gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence	40	9.5
52	gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome...	40	9.5
53	gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G...	40	9.5
54	ref|NM_001010913.2| Homo sapiens chromosome 1 open reading frame...	40	9.5
55	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	40	9.5
56	dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
57	dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
58	gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromoso...	40	9.5
59	emb|AJ575922.1|MSU575922 Monomorium subopacum satellite DNA, clo...	40	9.5
60	emb|AJ575920.1|MSU575920 Monomorium subopacum satellite DNA, clo...	40	9.5
61	emb|AJ575919.1|MSU575919 Monomorium subopacum satellite DNA, clo...	40	9.5
62	gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, comple...	40	9.5
63	emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch...	40	9.5
64	emb|AJ012585.1|TTH012585 Tetrahymena thermophila macronuclear ge...	40	9.5

---

>gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase precursor mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 717

 Score =  678 bits (342), Expect = 0.0
 Identities = 406/426 (95%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                       
Query: 271 ctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaactc 330
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 717 ctagaggaagtttctaatgtccaacttcctgacgtcaggcatcccctcatctttaaactc 658

                                                                       
Query: 331 ctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctc 390
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 657 ctccctctttagttgaccctccattgcttcaacaacttccttcttgagttccgtcagctc 598

                                                                       
Query: 391 agctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctccttccgaaa 450
           ||||||||||| || ||||||||| |  ||||||||||||||||||||||||||||||| 
Sbjct: 597 agctttggcaagttccatttcaagattctcctcaatcttgggaagatcctccttccgaat 538

                                                                       
Query: 451 gccaagctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgtc 510
           ||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||
Sbjct: 537 gccaagctttttgtttatcttgtcaaactctgccaagaggagattcatgttcttcttgtc 478

                                                                       
Query: 511 attcctcataagaggcttcttaatctccttctcaattttctcgagagcttccatcatcat 570
           | |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 477 actcctcagaagaggcttcttaatgtccttctcaactttctcgagagcttccatcatcat 418

                                                                       
Query: 571 atcctcaatacccatatcatctataagtccattctttttcctgagctgctgaagggtatc 630
           ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 417 atcctcaatacccatatcatctataagtccactctttttcctgagttgctgaagggtatc 358

                                                                       
Query: 631 caagtacgtcctagcatcagggatgccccttcgtgaaagtctcaatagtatatttaattc 690
           |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 357 caagtacgtccttgcatcagggatg-cccttcgtgaaagtctcaatagtatatttaattc 299

                 
Query: 691 tctgag 696
           ||||||
Sbjct: 298 tctgag 293

---

>ref|XM_464007.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1126

 Score =  438 bits (221), Expect = e-119
 Identities = 347/389 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 329
           |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 809 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 750

                                                                       
Query: 330 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 389
           ||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 749 cctccctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagct 690

                                                                       
Query: 390 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctccttccgaa 449
           ||  ||||||||||| || |||||| ||||||||||||||||||||||||||||| || |
Sbjct: 689 cacttttggcaatttccaattcaagctcttcctcaatcttgggaagatcctccttgcgga 630

                                                                       
Query: 450 agccaagctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgt 509
             |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||
Sbjct: 629 ttccaagctttttgtttatcttctcaaactctgccaagaggagacccatattcttcttgt 570

                                                                       
Query: 510 cattcctcataagaggcttcttaatctccttctcaattttctcgagagcttccatcatca 569
           || |||||| ||| |||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 569 cactcctcagaagtggcttcttaatctccttctcaactttctcaagggcttccatcatca 510

                                                                       
Query: 570 tatcctcaatacccatatcatctataagtccattctttttcctgagctgctgaagggtat 629
           || |||||  |||||||||||||||||| ||| ||||| |||||| || |||||| ||||
Sbjct: 509 tagcctcagcacccatatcatctataaggccactctttatcctgatctcctgaagagtat 450

                                        
Query: 630 ccaagtacgtcctagcatcagggatgccc 658
            |||||| ||||  |||||||||||||||
Sbjct: 449 tcaagtaagtccgtgcatcagggatgccc 421



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 180 gcttaaagcaccggctgtcacttgaaaagaaaa 212
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 890 gcttacagcgccggctgtcactggaaaagaaaa 858



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 134 ttcggtgcagttt-tattacaaagagcaagaa 164
           ||||||||||||| ||||||||| ||||||||
Sbjct: 938 ttcggtgcagtttttattacaaaaagcaagaa 907

---

>dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B14, full
           insert sequence
          Length = 1126

 Score =  438 bits (221), Expect = e-119
 Identities = 347/389 (89%)
 Strand = Plus / Minus

                                                                       
Query: 270 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 329
           |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 809 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 750

                                                                       
Query: 330 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 389
           ||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||
Sbjct: 749 cctccctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagct 690

                                                                       
Query: 390 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctccttccgaa 449
           ||  ||||||||||| || |||||| ||||||||||||||||||||||||||||| || |
Sbjct: 689 cacttttggcaatttccaattcaagctcttcctcaatcttgggaagatcctccttgcgga 630

                                                                       
Query: 450 agccaagctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgt 509
             |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||
Sbjct: 629 ttccaagctttttgtttatcttctcaaactctgccaagaggagacccatattcttcttgt 570

                                                                       
Query: 510 cattcctcataagaggcttcttaatctccttctcaattttctcgagagcttccatcatca 569
           || |||||| ||| |||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 569 cactcctcagaagtggcttcttaatctccttctcaactttctcaagggcttccatcatca 510

                                                                       
Query: 570 tatcctcaatacccatatcatctataagtccattctttttcctgagctgctgaagggtat 629
           || |||||  |||||||||||||||||| ||| ||||| |||||| || |||||| ||||
Sbjct: 509 tagcctcagcacccatatcatctataaggccactctttatcctgatctcctgaagagtat 450

                                        
Query: 630 ccaagtacgtcctagcatcagggatgccc 658
            |||||| ||||  |||||||||||||||
Sbjct: 449 tcaagtaagtccgtgcatcagggatgccc 421



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 180 gcttaaagcaccggctgtcacttgaaaagaaaa 212
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 890 gcttacagcgccggctgtcactggaaaagaaaa 858



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 134 ttcggtgcagttt-tattacaaagagcaagaa 164
           ||||||||||||| ||||||||| ||||||||
Sbjct: 938 ttcggtgcagtttttattacaaaaagcaagaa 907

---

>gb|AY103737.1| Zea mays PCO126068 mRNA sequence
          Length = 1045

 Score =  307 bits (155), Expect = 3e-80
 Identities = 354/419 (84%), Gaps = 1/419 (0%)
 Strand = Plus / Minus

                                                                       
Query: 270 cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 329
           |||| ||||||||||  |||||||  |||||||| |||||||||||||||||||  ||||
Sbjct: 859 cctacaggaagtttcggatgtccagtttcctgacatcaggcatctcctcatcttggaact 800

                                                                       
Query: 330 cctccctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagct 389
           |||||||||| ||||||  ||||||||| ||||||  ||||||||||||||| |||||||
Sbjct: 799 cctccctcttgagttgagtctccattgcctcaacacattccttcttaagttcagtcagct 740

                                                                       
Query: 390 cagctttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctccttccgaa 449
           ||  ||||||||| | || ||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 739 cacttttggcaatctccaattcaagttctttctcgatcttaggaagatcctccttccgaa 680

                                                                       
Query: 450 agccaagctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgt 509
            ||||||||||  ||| |||||||||||||||||||  ||     ||||||||||| |||
Sbjct: 679 tgccaagctttgcgttaatcttgtcaaactctgccataagggtggccatgttcttcttgt 620

                                                                       
Query: 510 cattcctcataagaggcttcttaatctccttctcaattttctcgagagcttccatcatca 569
           || |||| | ||| || |||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 619 cactccttaaaagtggtttcttaatatccttctcaatcttctcaagagcttccatcatca 560

                                                                       
Query: 570 tatcctcaatacccatatcatctataagtccattctttttcctgagctgctgaagggtat 629
            |   || || || |||| ||||||||| ||| ||||| | |||||||| ||||| ||||
Sbjct: 559 aaggttcgattccaatatgatctataagaccactctttattctgagctgttgaagagtat 500

                                                                      
Query: 630 ccaagtacgtcctagcatcagggatgccccttcgtgaaagtctcaatagtatatttaat 688
            |||||| ||||  |||||||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 499 tcaagtaagtccgtgcatcagggatg-cccttggtgaaggtctcaatggtatatttaat 442

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  176 bits (89), Expect = 6e-41
 Identities = 128/141 (90%)
 Strand = Plus / Minus

                                                                           
Query: 457     ctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgtcattcct 516
               ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||| ||||
Sbjct: 1640623 ctttttgtttatcttctcaaactctgccaagaggagacccatattcttcttgtcactcct 1640564

                                                                           
Query: 517     cataagaggcttcttaatctccttctcaattttctcgagagcttccatcatcatatcctc 576
               || ||| |||||||||||||||||||||| |||||| || ||||||||||||||| ||||
Sbjct: 1640563 cagaagtggcttcttaatctccttctcaactttctcaagggcttccatcatcatagcctc 1640504

                                    
Query: 577     aatacccatatcatctataag 597
               |  ||||||||||||||||||
Sbjct: 1640503 agcacccatatcatctataag 1640483



 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                           
Query: 334     cctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctcagc 393
               ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||  
Sbjct: 1641220 cctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagctcact 1641161

                                                                  
Query: 394     tttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctcctt 444
               ||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 1641160 tttggcaatttccaattcaagctcttcctcaatcttgggaagatcctcctt 1641110



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                           
Query: 270     cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 329
               |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 1641455 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 1641396

                      
Query: 330     cctccct 336
               |||||||
Sbjct: 1641395 cctccct 1641389



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                      
Query: 604     ctttttcctgagctgctgaagggtatccaagtacgtcctagcatcagggatgccc 658
               |||| |||||| || |||||| |||| |||||| ||||  |||||||||||||||
Sbjct: 1640318 ctttatcctgatctcctgaagagtattcaagtaagtccgtgcatcagggatgccc 1640264



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 180     gcttaaagcaccggctgtcacttgaaaagaaaa 212
               ||||| ||| |||||||||||| ||||||||||
Sbjct: 1641536 gcttacagcgccggctgtcactggaaaagaaaa 1641504



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 577     aatacccatatcatctataa 596
               ||||||||||||||||||||
Sbjct: 2086167 aatacccatatcatctataa 2086186



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 134     ttcggtgcagtttt-attacaaagagcaagaa 164
               |||||||||||||| |||||||| ||||||||
Sbjct: 1641584 ttcggtgcagtttttattacaaaaagcaagaa 1641553

---

>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score =  176 bits (89), Expect = 6e-41
 Identities = 128/141 (90%)
 Strand = Plus / Minus

                                                                         
Query: 457   ctttttgtttatcttgtcaaactctgccaagagaagacccatgttcttcctgtcattcct 516
             ||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||| ||||
Sbjct: 77726 ctttttgtttatcttctcaaactctgccaagaggagacccatattcttcttgtcactcct 77667

                                                                         
Query: 517   cataagaggcttcttaatctccttctcaattttctcgagagcttccatcatcatatcctc 576
             || ||| |||||||||||||||||||||| |||||| || ||||||||||||||| ||||
Sbjct: 77666 cagaagtggcttcttaatctccttctcaactttctcaagggcttccatcatcatagcctc 77607

                                  
Query: 577   aatacccatatcatctataag 597
             |  ||||||||||||||||||
Sbjct: 77606 agcacccatatcatctataag 77586



 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                         
Query: 334   cctctttagttgaccctccattgcttcaacaacttccttcttaagttccgtcagctcagc 393
             ||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||  
Sbjct: 78323 cctctttagttgaacctccattgcttcaacacattccttcttaagctccgtcagctcact 78264

                                                                
Query: 394   tttggcaatttgcatttcaagttcttcctcaatcttgggaagatcctcctt 444
             ||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 78263 tttggcaatttccaattcaagctcttcctcaatcttgggaagatcctcctt 78213



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 270   cctagaggaagtttctaatgtccaacttcctgacgtcaggcatctcctcatctttaaact 329
             |||| ||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||||
Sbjct: 78558 cctacaggaagtttctgatgtccaacttcttgacatcaggcatctcctcgtctttgaact 78499

                    
Query: 330   cctccct 336
             |||||||
Sbjct: 78498 cctccct 78492



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 604   ctttttcctgagctgctgaagggtatccaagtacgtcctagcatcagggatgccc 658
             |||| |||||| || |||||| |||| |||||| ||||  |||||||||||||||
Sbjct: 77421 ctttatcctgatctcctgaagagtattcaagtaagtccgtgcatcagggatgccc 77367



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 180   gcttaaagcaccggctgtcacttgaaaagaaaa 212
             ||||| ||| |||||||||||| ||||||||||
Sbjct: 78639 gcttacagcgccggctgtcactggaaaagaaaa 78607



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 134   ttcggtgcagtttt-attacaaagagcaagaa 164
             |||||||||||||| |||||||| ||||||||
Sbjct: 78687 ttcggtgcagtttttattacaaaaagcaagaa 78656

---

>gb|BT013928.1| Lycopersicon esculentum clone 132926R, mRNA sequence
          Length = 1154

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 308 ggcatctcctcatctttaaactcctccctctt 339
           |||||||||||||| || ||||||||||||||
Sbjct: 810 ggcatctcctcatccttgaactcctccctctt 779

---

>emb|X74296.1|GMATPSYNS G.max gene for ATP synthase subunit
          Length = 2375

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 467  atcttgtcaaactctgccaagagaag 492
            ||||| ||||||||||||||||||||
Sbjct: 2066 atcttatcaaactctgccaagagaag 2041

---

>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete
             sequence
          Length = 197576

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    aatacaacagcagccgcaggc 44
             |||||||||||||||||||||
Sbjct: 78736 aatacaacagcagccgcaggc 78756

---

>gb|AC068913.22| Mus musculus strain 129/Sv clone ct7-362c13 map 2, complete sequence
          Length = 163615

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 569   atatcctcaatacccatatca 589
             |||||||||||||||||||||
Sbjct: 59403 atatcctcaatacccatatca 59383

---

>dbj|AK061919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B04, full
           insert sequence
          Length = 401

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 180 gcttaaagcaccggctgtcacttgaaaagaaaa 212
           ||||| ||| |||||||||||| ||||||||||
Sbjct: 112 gcttacagcgccggctgtcactggaaaagaaaa 80



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 270 cctagaggaagtttctaatgtccaacttc 298
           |||| ||||||||||| ||||||||||||
Sbjct: 31  cctacaggaagtttctgatgtccaacttc 3



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 134 ttcggtgcagtttt-attacaaagagcaagaa 164
           |||||||||||||| |||||||| ||||||||
Sbjct: 160 ttcggtgcagtttttattacaaaaagcaagaa 129

---

>gb|AC025366.11| Homo sapiens chromosome 8, clone RP11-238I10, complete sequence
          Length = 157390

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 593  ataagtccattctttttcctg 613
            |||||||||||||||||||||
Sbjct: 1139 ataagtccattctttttcctg 1159

---

>gb|AC068911.38| Mus musculus strain 129/Sv chromosome 2 clone ct7-161k20, complete
              sequence
          Length = 158450

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 569    atatcctcaatacccatatca 589
              |||||||||||||||||||||
Sbjct: 144617 atatcctcaatacccatatca 144637

---

>gb|AC112719.4| Homo sapiens BAC clone RP11-630D6 from 4, complete sequence
          Length = 167284

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 522   gaggcttcttaatctccttctcaat 546
             ||||||||||| |||||||||||||
Sbjct: 86156 gaggcttcttattctccttctcaat 86180

---

>gb|AC093599.6| Homo sapiens BAC clone RP11-285C1 from 4, complete sequence
          Length = 187937

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 483   ccaagagaagacccatgttcttcctgtcattcc 515
             |||| ||||||||||||  ||||||||||||||
Sbjct: 22885 ccaacagaagacccatgggcttcctgtcattcc 22853

---

>gb|AC155940.6| Mus musculus 10 BAC RP24-94O5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211515

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 665    gaaagtctcaatagtatatttaatt 689
              ||||||||||||| |||||||||||
Sbjct: 109303 gaaagtctcaataatatatttaatt 109327

---

>gb|AC012377.5|AC012377 Homo sapiens chromosome 15 clone RP11-325N19 map 15q14, complete
             sequence
          Length = 197782

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   ggaagtttctaatgtccaact 296
             |||||||||||||||||||||
Sbjct: 62156 ggaagtttctaatgtccaact 62136

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    ctcctcatctttaaactcctc 333
              |||||||||||||||||||||
Sbjct: 151433 ctcctcatctttaaactcctc 151413

---

>emb|BX908734.3| Mouse DNA sequence from clone RP23-266F3 on chromosome 2, complete
            sequence
          Length = 27806

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 569  atatcctcaatacccatatca 589
            |||||||||||||||||||||
Sbjct: 4532 atatcctcaatacccatatca 4552

---

>gb|AC023908.6|AC023908 Homo sapiens chromosome 15 clone RP11-37C7 map 15q14, complete sequence
          Length = 169670

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    ggaagtttctaatgtccaact 296
              |||||||||||||||||||||
Sbjct: 137323 ggaagtttctaatgtccaact 137303

---

>gb|AC090819.7| Homo sapiens chromosome 8, clone CTD-2544L4, complete sequence
          Length = 208961

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 593    ataagtccattctttttcctg 613
              |||||||||||||||||||||
Sbjct: 159256 ataagtccattctttttcctg 159276

---

>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 588    catctataagtccattctttt 608
              |||||||||||||||||||||
Sbjct: 149222 catctataagtccattctttt 149242

---

>dbj|AK073546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K10, full
           insert sequence
          Length = 2621

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 313 ctcctcatctttaaactcctc 333
           |||||||||||||||||||||
Sbjct: 299 ctcctcatctttaaactcctc 279

---

>dbj|AK072146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127P15, full
           insert sequence
          Length = 3101

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 313 ctcctcatctttaaactcctc 333
           |||||||||||||||||||||
Sbjct: 283 ctcctcatctttaaactcctc 263

---

>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete
              sequence
          Length = 230161

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 196    gtcacttgaaaagaaaaatcacaga 220
              |||||||||||| ||||||||||||
Sbjct: 113396 gtcacttgaaaaaaaaaatcacaga 113372

---

>gb|AY609461.1| Sus scrofa clone Clu_12354.scr.msk.p1.Contig4, mRNA sequence
          Length = 1718

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 192 ggctgtcacttgaaaagaaaaatca 216
           ||||| |||||||||||||||||||
Sbjct: 281 ggctgccacttgaaaagaaaaatca 257

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 313    ctcctcatctttaaactcctc 333
              |||||||||||||||||||||
Sbjct: 151433 ctcctcatctttaaactcctc 151413

---

>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    ctcctcatctttaaactcctc 333
              |||||||||||||||||||||
Sbjct: 153560 ctcctcatctttaaactcctc 153580

---

>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete
              sequence
          Length = 233417

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 569    atatcctcaatacccatatca 589
              |||||||||||||||||||||
Sbjct: 164443 atatcctcaatacccatatca 164423

---

>emb|AL845273.7| Mouse DNA sequence from clone RP23-334D15 on chromosome 2, complete
             sequence
          Length = 158861

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 495   ccatgttcttcctgtcattcc 515
             |||||||||||||||||||||
Sbjct: 30672 ccatgttcttcctgtcattcc 30652

---

>dbj|AP003547.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1399D2
          Length = 169660

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 593    ataagtccattctttttcctg 613
              |||||||||||||||||||||
Sbjct: 164498 ataagtccattctttttcctg 164518

---

>dbj|AP003693.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1762B7, complete
             sequence
          Length = 150581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 593   ataagtccattctttttcctg 613
             |||||||||||||||||||||
Sbjct: 65133 ataagtccattctttttcctg 65153

---

>gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-246M15, complete
             sequence
          Length = 113092

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   taagtccattctttttcctg 613
             ||||||||||||||||||||
Sbjct: 41481 taagtccattctttttcctg 41500

---

>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 209011

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 190   ccggctgtcacttgaaaagaaaaa 213
             |||||||||||| |||||||||||
Sbjct: 90962 ccggctgtcactagaaaagaaaaa 90985

---

>ref|XM_748618.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09280) partial
            mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  tgcttcaacaacttccttct 374
            ||||||||||||||||||||
Sbjct: 1467 tgcttcaacaacttccttct 1448

---

>gb|AC127374.4| Mus musculus BAC clone RP23-46G11 from chromosome 8, complete sequence
          Length = 180143

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gaagaaacaaaactctcaac 105
              ||||||||||||||||||||
Sbjct: 143854 gaagaaacaaaactctcaac 143835

---

>emb|Z68012.1|CET24D5 Caenorhabditis elegans Cosmid T24D5, complete sequence
          Length = 37666

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 358  ttcaacaacttccttcttaagttc 381
            |||||||||||| |||||||||||
Sbjct: 9785 ttcaacaacttctttcttaagttc 9808

---

>gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosome 5, complete sequence
          Length = 186083

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    gaaaagaaaaatcacagatc 222
              ||||||||||||||||||||
Sbjct: 101387 gaaaagaaaaatcacagatc 101406

---

>ref|XM_671916.1| Plasmodium berghei strain ANKA fructose-bisphosphate aldolase,
            (PB000757.02.0) partial mRNA
          Length = 1098

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  gcagttttattacaaagagc 159
            ||||||||||||||||||||
Sbjct: 985  gcagttttattacaaagagc 1004

---

>gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete sequence
          Length = 132702

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   gtccattctttttcctgagc 616
             ||||||||||||||||||||
Sbjct: 84312 gtccattctttttcctgagc 84331

---

>emb|AL590308.8| Human DNA sequence from clone RP11-501K14 on chromosome 6 Contains the
             5' end of the REPS1 gene for RALBP1 associated Eps domain
             containing 1, the gene for hypothetical protein PRO2013
             and two CpG islands, complete sequence
          Length = 100296

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   actctgccaagagaagaccc 496
             ||||||||||||||||||||
Sbjct: 30932 actctgccaagagaagaccc 30951

---

>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 86332

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   aatttgcatttcaagttctt 419
             ||||||||||||||||||||
Sbjct: 69084 aatttgcatttcaagttctt 69103

---

>emb|AL354941.10| Human DNA sequence from clone RP11-62E14 on chromosome 9 Contains part
             of the RFX3 gene for regulatory factor X 3 (influences HLA
             class II expression) and an RPL7 (ribosomal protein L7)
             pseudogene, complete sequence
          Length = 93029

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tcacttgaaaagaaaaatca 216
             ||||||||||||||||||||
Sbjct: 12313 tcacttgaaaagaaaaatca 12332

---

>emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chromosome 20 Contains the
             5' end of the SLC24A3 gene for solute carrier family 24
             (sodium/potassium/calcium exchanger) member 3, a novel
             gene and a CpG island, complete sequence
          Length = 185473

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 533   atctccttctcaattttctc 552
             ||||||||||||||||||||
Sbjct: 31034 atctccttctcaattttctc 31053

---

>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   aaacaccatgaggattatca 255
             ||||||||||||||||||||
Sbjct: 93972 aaacaccatgaggattatca 93953

---

>gb|AY046926.1| Lactococcus lactis subsp. cremoris YdjD (ydjD), Nox (nox), and Ssb
            (ssb) genes, complete cds; and GroES (groES) gene,
            partial cds
          Length = 3172

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccaagctttttgtttatctt 471
            ||||||||||||||||||||
Sbjct: 2093 ccaagctttttgtttatctt 2074

---

>dbj|AK128488.1| Homo sapiens cDNA FLJ46636 fis, clone TRACH3002188
          Length = 4492

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  aatttgcatttcaagttctt 419
            ||||||||||||||||||||
Sbjct: 1755 aatttgcatttcaagttctt 1736

---

>gb|AC104664.2| Homo sapiens BAC clone RP11-724H6 from 4, complete sequence
          Length = 158145

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 468    tcttgtcaaactctgccaagagaa 491
              |||||||| |||||||||||||||
Sbjct: 111366 tcttgtcagactctgccaagagaa 111343

---

>gb|AC008790.7| Homo sapiens chromosome 5 clone CTD-2040H20, complete sequence
          Length = 117021

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcctaaggaagaaacaaaac 98
             ||||||||||||||||||||
Sbjct: 67601 gcctaaggaagaaacaaaac 67582

---

>gb|AF247062.1|AF247062 Plasmodium berghei QIMR fructose 1,6-bisphosphate aldolase gene,
           partial cds
          Length = 1054

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gcagttttattacaaagagc 159
           ||||||||||||||||||||
Sbjct: 962 gcagttttattacaaagagc 981

---

>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   ttttcggtgcagttttattacaaa 155
             ||||||||||| ||||||||||||
Sbjct: 25488 ttttcggtgcatttttattacaaa 25511

---

>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence
          Length = 166104

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   agctttggcaatttgcattt 410
             ||||||||||||||||||||
Sbjct: 62736 agctttggcaatttgcattt 62755

---

>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete
             sequence
          Length = 29605

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 584   atatcatctataagtccattctttttcc 611
             ||||||||| |||| |||||||||||||
Sbjct: 23586 atatcatctctaaggccattctttttcc 23613

---

>ref|NM_001010913.2| Homo sapiens chromosome 1 open reading frame 140 (C1orf140), mRNA
          Length = 4492

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  aatttgcatttcaagttctt 419
            ||||||||||||||||||||
Sbjct: 1755 aatttgcatttcaagttctt 1736

---

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 640     cctagcatcagggatgcccc 659
               ||||||||||||||||||||
Sbjct: 2466516 cctagcatcagggatgcccc 2466535

---

>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 577    aatacccatatcatctataa 596
              ||||||||||||||||||||
Sbjct: 136375 aatacccatatcatctataa 136394

---

>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OJ1679_B08
          Length = 142529

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 577 aatacccatatcatctataa 596
           ||||||||||||||||||||
Sbjct: 860 aatacccatatcatctataa 879

---

>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete sequence
          Length = 214859

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 455    agctttttgtttatcttgtcaaac 478
              ||||||| ||||||||||||||||
Sbjct: 155144 agcttttagtttatcttgtcaaac 155121

---

>emb|AJ575922.1|MSU575922 Monomorium subopacum satellite DNA, clone MOSU-E-2.26
          Length = 2530

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 500  ttcttcctgtcattcctcat 519
            ||||||||||||||||||||
Sbjct: 2039 ttcttcctgtcattcctcat 2020

---

>emb|AJ575920.1|MSU575920 Monomorium subopacum satellite DNA, clone MOSU-E-2.1
          Length = 2472

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 500  ttcttcctgtcattcctcat 519
            ||||||||||||||||||||
Sbjct: 1983 ttcttcctgtcattcctcat 1964

---

>emb|AJ575919.1|MSU575919 Monomorium subopacum satellite DNA, clone MOSU-E-1.2
          Length = 2476

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 500  ttcttcctgtcattcctcat 519
            ||||||||||||||||||||
Sbjct: 1988 ttcttcctgtcattcctcat 1969

---

>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence
          Length = 205357

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     gaagaaacaaaactctcaac 105
              ||||||||||||||||||||
Sbjct: 181093 gaagaaacaaaactctcaac 181112

---

>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
             sequence
          Length = 182054

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   ctttaaactcctccctcttt 340
             ||||||||||||||||||||
Sbjct: 37909 ctttaaactcctccctcttt 37890

---

>emb|AJ012585.1|TTH012585 Tetrahymena thermophila macronuclear gene encoding ribosomal protein
            L3, exons 1-2
          Length = 4634

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 356  gcttcaacaacttccttctt 375
            ||||||||||||||||||||
Sbjct: 1774 gcttcaacaacttccttctt 1755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,961,174
Number of Sequences: 3902068
Number of extensions: 7961174
Number of successful extensions: 155188
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154844
Number of HSP's gapped (non-prelim): 336
length of query: 696
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 673
effective length of database: 17,143,297,704
effective search space: 11537439354792
effective search space used: 11537439354792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---