ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11c15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YCZ7_SCHPO (O74560) Hypothetical protein C970.07c in chromosome III 32 1.2

>YCZ7_SCHPO (O74560) Hypothetical protein C970.07c in chromosome III|
          Length = 636

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = +1

Query: 196 DCNLGKLQSSYTYLQFLFRSILDF-----LFHASPTTEIP-FESIFLISFLVWPAY-FWN 354
           D   G   S YTY Q++  S + F     +F  +  T +P F  +F ISF  WPA+ F++
Sbjct: 424 DIGSGLSGSDYTYEQYINHSAVAFSFTEEIFEKNFVTVLPDFVKLFSISFGYWPAFSFYD 483

Query: 355 E 357
           E
Sbjct: 484 E 484


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,090,551
Number of Sequences: 219361
Number of extensions: 1710230
Number of successful extensions: 3417
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3417
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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