Clone Name | rbasd11c15 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YCZ7_SCHPO (O74560) Hypothetical protein C970.07c in chromosome III | 32 | 1.2 |
---|
>YCZ7_SCHPO (O74560) Hypothetical protein C970.07c in chromosome III| Length = 636 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%) Frame = +1 Query: 196 DCNLGKLQSSYTYLQFLFRSILDF-----LFHASPTTEIP-FESIFLISFLVWPAY-FWN 354 D G S YTY Q++ S + F +F + T +P F +F ISF WPA+ F++ Sbjct: 424 DIGSGLSGSDYTYEQYINHSAVAFSFTEEIFEKNFVTVLPDFVKLFSISFGYWPAFSFYD 483 Query: 355 E 357 E Sbjct: 484 E 484 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,090,551 Number of Sequences: 219361 Number of extensions: 1710230 Number of successful extensions: 3417 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3350 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3417 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)