ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11c13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 1e-16
2gb|DQ083179.1| Oryza sativa (indica cultivar-group) clone 2S7G49... 96 1e-16
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AK066916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 96 1e-16
6gb|AY109746.1| Zea mays CL5211_1 mRNA sequence 86 1e-13
7dbj|AK105056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
8dbj|AK105050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
9gb|AY105976.1| Zea mays PCO064179 mRNA sequence 64 5e-07
10gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
12dbj|AK064809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
14gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
15ref|NM_105939.3| Arabidopsis thaliana catalytic/ threonine synth... 42 1.8
16emb|AJ867256.1| Oncorhynchus mykiss IL11 gene for interleukin-11... 42 1.8
17gb|AY099629.1| Arabidopsis thaliana threonine synthase, putative... 42 1.8
18gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F2... 42 1.8
19gb|BT002151.1| Arabidopsis thaliana threonine synthase, putative... 42 1.8
20gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N... 42 1.8
21gb|AC186558.1| Gasterosteus aculeatus clone VMRC26-150D01, compl... 40 7.0
22ref|XM_958350.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.0
23ref|XM_325306.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.0
24ref|XM_782110.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.0
25ref|XM_782066.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.0
26emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 i... 40 7.0
27emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BA... 40 7.0
28ref|XM_692291.1| PREDICTED: Danio rerio similar to MYST histone ... 40 7.0
29ref|NM_058529.2| Caenorhabditis elegans Y37E3.10 (Y37E3.10) mRNA... 40 7.0
30gb|AC007603.5| Homo sapiens chromosome 16 clone RP11-305A4, comp... 40 7.0
31gb|AC084676.1|CBRG47J19 Caenorhabditis briggsae cosmid G47J19, c... 40 7.0
32gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete seq... 40 7.0
33emb|AL929334.12| Zebrafish DNA sequence from clone DKEY-24F15, c... 40 7.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                           
Query: 349     ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 408
               ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 7718525 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 7718466

                                                                           
Query: 409     aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 468
               |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 7718465 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 7718412

                                          
Query: 469     aagggcttccgtccacatcagaagggg 495
               |||||||||||||| | ||||| ||||
Sbjct: 7718411 aagggcttccgtccgcttcagaggggg 7718385



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 12      atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
               ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 7718816 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 7718757

                 
Query: 72      aa 73
               ||
Sbjct: 7718756 aa 7718755
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>gb|DQ083179.1| Oryza sativa (indica cultivar-group) clone 2S7G49 mRNA sequence
          Length = 522

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                       
Query: 349 ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 408
           ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 250 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 191

                                                                       
Query: 409 aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 468
           |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 190 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 137

                                      
Query: 469 aagggcttccgtccacatcagaagggg 495
           |||||||||||||| | ||||| ||||
Sbjct: 136 aagggcttccgtccgcttcagaggggg 110



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 30  acagtgaggttttagtgaggtttcagacaaacagcaacccagaa 73
           |||||||||| | |||||||||||| ||| || |||||||||||
Sbjct: 522 acagtgaggtctcagtgaggtttcaaacacacggcaacccagaa 479
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                           
Query: 349     ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 408
               ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 7716360 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 7716301

                                                                           
Query: 409     aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 468
               |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 7716300 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 7716247

                                          
Query: 469     aagggcttccgtccacatcagaagggg 495
               |||||||||||||| | ||||| ||||
Sbjct: 7716246 aagggcttccgtccgcttcagaggggg 7716220



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 12      atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
               ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 7716651 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 7716592

                 
Query: 72      aa 73
               ||
Sbjct: 7716591 aa 7716590
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>dbj|AK066916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E02, full
            insert sequence
          Length = 4049

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                        
Query: 349  ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 408
            ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 3619 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 3560

                                                                        
Query: 409  aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 468
            |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 3559 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 3506

                                       
Query: 469  aagggcttccgtccacatcagaagggg 495
            |||||||||||||| | ||||| ||||
Sbjct: 3505 aagggcttccgtccgcttcagaggggg 3479



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 12   atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
            ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 3910 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 3851

              
Query: 72   aa 73
            ||
Sbjct: 3850 aa 3849
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 122/147 (82%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                          
Query: 349    ccttggcgaagaaccgactaaagccccggctttgtttctcgggcaactggttagcaaacg 408
              ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||  |
Sbjct: 134269 ccttggcgaagaaccgactgaaaccccggttttgtttctcgggcaattggttagaaattg 134328

                                                                          
Query: 409    aggaagaggatgaggatcgcgacctatgctttgggcgcttggaactgttcattgaaaggg 468
              |||||      || |||| ||| |||||||||||||||||||| | |||   ||||||| 
Sbjct: 134329 aggaa------gatgatctcgatctatgctttgggcgcttggatccgtttggtgaaagga 134382

                                         
Query: 469    aagggcttccgtccacatcagaagggg 495
              |||||||||||||| | ||||| ||||
Sbjct: 134383 aagggcttccgtccgcttcagaggggg 134409



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                          
Query: 12     atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
              ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 133978 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 134037

                
Query: 72     aa 73
              ||
Sbjct: 134038 aa 134039
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>gb|AY109746.1| Zea mays CL5211_1 mRNA sequence
          Length = 935

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 147/181 (81%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 337 ttcactctttgcccttggcgaagaaccgactaaagccccggctttgtttctcgggcaact 396
           |||||||||||  ||| || ||||||||||| || || ||||| ||||| || |||||||
Sbjct: 337 ttcactctttggtcttcgcaaagaaccgactgaatcctcggctctgtttgtctggcaact 396

                                                                       
Query: 397 ggt---tagcaaacgaggaagaggatgaggatcgcgacctatgctttgggcgcttggaac 453
           |||   | |  || || ||||| || ||||||| ||| | |||||| ||||||||||| |
Sbjct: 397 ggtggttggtgaatgacgaagacgaagaggatctcgatcgatgcttcgggcgcttggagc 456

                                                                       
Query: 454 tgttcattgaaagggaagggcttccgtccacatcagaaggggtcatatgggtcttgtatc 513
           |||||   |||||| |||||||||||||  ||||||||||| |||| || ||||||||||
Sbjct: 457 tgttcggagaaaggaaagggcttccgtctgcatcagaagggatcatgtgtgtcttgtatc 516

            
Query: 514 c 514
           |
Sbjct: 517 c 517
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>dbj|AK105056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C06, full
           insert sequence
          Length = 323

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 12  atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
           ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 275 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 216

             
Query: 72  aa 73
           ||
Sbjct: 215 aa 214
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>dbj|AK105050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B06, full
           insert sequence
          Length = 330

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 12  atgcaggtaagcacatgtacagtgaggttttagtgaggtttcagacaaacagcaacccag 71
           ||||| |||||||||||||||||||||| | |||||||||||| ||| || |||||||||
Sbjct: 203 atgcaagtaagcacatgtacagtgaggtctcagtgaggtttcaaacacacggcaacccag 144

             
Query: 72  aa 73
           ||
Sbjct: 143 aa 142
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>gb|AY105976.1| Zea mays PCO064179 mRNA sequence
          Length = 1469

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 142/178 (79%), Gaps = 3/178 (1%)
 Strand = Plus / Minus

                                                                        
Query: 337  ttcactctttgcccttggcgaagaaccgactaaagccccggctttgtttctcgggcaact 396
            |||||||||||| ||| |||||||||||||| || || ||| | ||||| || |||||||
Sbjct: 1353 ttcactctttgctcttcgcgaagaaccgactgaatcctcggttctgtttgtctggcaact 1294

                                                                        
Query: 397  ggt---tagcaaacgaggaagaggatgaggatcgcgacctatgctttgggcgcttggaac 453
            |||   | |  || |||||||| || ||||||| ||| | |||||| |||||||||||  
Sbjct: 1293 ggtggttggtgaatgaggaagacgaagaggatctcgatcgatgcttcgggcgcttggagg 1234

                                                                      
Query: 454  tgttcattgaaagggaagggcttccgtccacatcagaaggggtcatatgggtcttgta 511
            ||||    ||| || |||||||  ||||| ||||||||||| |||| || ||||||||
Sbjct: 1233 tgtttggagaagggaaagggctaacgtccgcatcagaagggatcatgtgtgtcttgta 1176
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>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0042K08, complete sequence
          Length = 117839

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 360   aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 419
             |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 76686 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 76627

                                             
Query: 420   gaggatcgcgacctatgctttgggcgcttgga 451
             || || |  || || |||||||| ||||||||
Sbjct: 76626 gaagaccttgatctgtgctttggacgcttgga 76595
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 360     aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 419
               |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 3961918 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 3961859

                                               
Query: 420     gaggatcgcgacctatgctttgggcgcttgga 451
               || || |  || || |||||||| ||||||||
Sbjct: 3961858 gaagaccttgatctgtgctttggacgcttgga 3961827
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>dbj|AK064809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D20, full
            insert sequence
          Length = 3194

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 360  aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 419
            |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 2693 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 2634

                                            
Query: 420  gaggatcgcgacctatgctttgggcgcttgga 451
            || || |  || || |||||||| ||||||||
Sbjct: 2633 gaagaccttgatctgtgctttggacgcttgga 2602
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                           
Query: 360     aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 419
               |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 3961839 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 3961780

                                               
Query: 420     gaggatcgcgacctatgctttgggcgcttgga 451
               || || |  || || |||||||| ||||||||
Sbjct: 3961779 gaagaccttgatctgtgctttggacgcttgga 3961748
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>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone
             OSJNBb0094D21, complete sequence
          Length = 127821

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 360   aaccgactaaagccccggctttgtttctcgggcaactggttagcaaacgaggaagaggat 419
             |||||||| || || ||||| |||||||| |  |||||||||| ||| ||||||||||| 
Sbjct: 15844 aaccgactgaaacctcggctctgtttctctgtgaactggttagtaaatgaggaagaggaa 15785

                                             
Query: 420   gaggatcgcgacctatgctttgggcgcttgga 451
             || || |  || || |||||||| ||||||||
Sbjct: 15784 gaagaccttgatctgtgctttggacgcttgga 15753
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>ref|NM_105939.3| Arabidopsis thaliana catalytic/ threonine synthase AT1G72810
          mRNA, complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 32 agtgaggttttagtgaggtttcaga 56
          |||||||||| ||||||||||||||
Sbjct: 97 agtgaggtttaagtgaggtttcaga 73
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>emb|AJ867256.1| Oncorhynchus mykiss IL11 gene for interleukin-11, exons 1-5
          Length = 9894

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  aaggcaagtattactccagca 182
            |||||||||||||||||||||
Sbjct: 4898 aaggcaagtattactccagca 4878
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>gb|AY099629.1| Arabidopsis thaliana threonine synthase, putative (At1g72810)
          mRNA, complete cds
          Length = 1701

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 32 agtgaggttttagtgaggtttcaga 56
          |||||||||| ||||||||||||||
Sbjct: 97 agtgaggtttaagtgaggtttcaga 73
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>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete
             sequence
          Length = 101105

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 32    agtgaggttttagtgaggtttcaga 56
             |||||||||| ||||||||||||||
Sbjct: 10196 agtgaggtttaagtgaggtttcaga 10172
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>gb|BT002151.1| Arabidopsis thaliana threonine synthase, putative (At1g72810)
          mRNA, complete cds
          Length = 1671

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 32 agtgaggttttagtgaggtttcaga 56
          |||||||||| ||||||||||||||
Sbjct: 73 agtgaggtttaagtgaggtttcaga 49
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>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence,
            complete sequence
          Length = 116944

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 32   agtgaggttttagtgaggtttcaga 56
            |||||||||| ||||||||||||||
Sbjct: 2894 agtgaggtttaagtgaggtttcaga 2918
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>gb|AC186558.1| Gasterosteus aculeatus clone VMRC26-150D01, complete sequence
          Length = 166468

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   acgaggaagaggatgaggat 425
             ||||||||||||||||||||
Sbjct: 96189 acgaggaagaggatgaggat 96170
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>ref|XM_958350.1| Neurospora crassa OR74A hypothetical protein ( related to spliceosome
            associated protein 145 [imported] - Neurospora crassa
            OR74A ) (NCU05452.1) partial mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  acgaggaagaggatgaggat 425
            ||||||||||||||||||||
Sbjct: 1337 acgaggaagaggatgaggat 1356
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>ref|XM_325306.1| Neurospora crassa OR74A hypothetical protein ( related to spliceosome
            associated protein 145 [imported] - Neurospora crassa
            OR74A ) (NCU05452.1) partial mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  acgaggaagaggatgaggat 425
            ||||||||||||||||||||
Sbjct: 1337 acgaggaagaggatgaggat 1356
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>ref|XM_782110.1| PREDICTED: Strongylocentrotus purpuratus similar to twk-8 protein
           like family member (XE894) (LOC582143), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 tagcaaacgaggaagaggatgagg 423
           |||||||||||||||| |||||||
Sbjct: 578 tagcaaacgaggaagatgatgagg 555
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>ref|XM_782066.1| PREDICTED: Strongylocentrotus purpuratus similar to twk-8 protein
           like family member (XE894) (LOC582095), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 tagcaaacgaggaagaggatgagg 423
           |||||||||||||||| |||||||
Sbjct: 197 tagcaaacgaggaagatgatgagg 174
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>emb|CR524821.5| Zebrafish DNA sequence from clone CH211-192F15 in linkage group 16,
              complete sequence
          Length = 152728

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     gtgaggttttagtgaggttt 52
              ||||||||||||||||||||
Sbjct: 125292 gtgaggttttagtgaggttt 125311
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>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20
          Length = 86476

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   acgaggaagaggatgaggat 425
             ||||||||||||||||||||
Sbjct: 26004 acgaggaagaggatgaggat 26023
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>ref|XM_692291.1| PREDICTED: Danio rerio similar to MYST histone acetyltransferase
            (monocytic leukemia) 4 (LOC568932), mRNA
          Length = 4899

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  acgaggaagaggatgaggat 425
            ||||||||||||||||||||
Sbjct: 2021 acgaggaagaggatgaggat 2040
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>ref|NM_058529.2| Caenorhabditis elegans Y37E3.10 (Y37E3.10) mRNA, complete cds
          Length = 1549

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 406 acgaggaagaggatgaggat 425
           ||||||||||||||||||||
Sbjct: 905 acgaggaagaggatgaggat 924
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>gb|AC007603.5| Homo sapiens chromosome 16 clone RP11-305A4, complete sequence
          Length = 196927

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   aacaagccaacatcacagaa 317
             ||||||||||||||||||||
Sbjct: 73542 aacaagccaacatcacagaa 73523
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>gb|AC084676.1|CBRG47J19 Caenorhabditis briggsae cosmid G47J19, complete sequence
          Length = 41327

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   acgaggaagaggatgaggat 425
             ||||||||||||||||||||
Sbjct: 22390 acgaggaagaggatgaggat 22371
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>gb|AC087079.1| Caenorhabditis elegans cosmid Y37E3, complete sequence
          Length = 106935

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   acgaggaagaggatgaggat 425
             ||||||||||||||||||||
Sbjct: 15834 acgaggaagaggatgaggat 15853
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>emb|AL929334.12| Zebrafish DNA sequence from clone DKEY-24F15, complete sequence
          Length = 226833

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   acgaggaagaggatgaggat 425
             ||||||||||||||||||||
Sbjct: 30885 acgaggaagaggatgaggat 30866


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,049,463
Number of Sequences: 3902068
Number of extensions: 4049463
Number of successful extensions: 81784
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81628
Number of HSP's gapped (non-prelim): 155
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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