ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast ... 45 7e-05
2ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast ... 36 0.033
3ALF1_CAEEL (P54216) Fructose-bisphosphate aldolase 1 (EC 4.1.2.1... 30 1.4
4ALF2_CAEEL (P46563) Fructose-bisphosphate aldolase 2 (EC 4.1.2.1... 29 3.1
5ALDOA_PONPY (Q5NVR5) Fructose-bisphosphate aldolase A (EC 4.1.2.... 28 6.8
6ALDOA_HUMAN (P04075) Fructose-bisphosphate aldolase A (EC 4.1.2.... 28 6.8
7ALDOA_RABIT (P00883) Fructose-bisphosphate aldolase A (EC 4.1.2.... 28 8.9

>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC|
           4.1.2.13) (ALDP)
          Length = 388

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 24/47 (51%), Positives = 26/47 (55%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXAAAAKENMFVKXYXY 25
           +PENV AAQ+             LG  TSDG AA AKE MFVK Y Y
Sbjct: 342 QPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388



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>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor|
           (EC 4.1.2.13) (Fragment)
          Length = 356

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -3

Query: 162 PENVAAAQEXXXXXXXXXXXXXLGXNTSDGXAAAAKENMFVKXYXY 25
           PENV AAQE             LG    DG +  AK+ +FVK Y Y
Sbjct: 311 PENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356



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>ALF1_CAEEL (P54216) Fructose-bisphosphate aldolase 1 (EC 4.1.2.13) (Aldolase|
           CE-1) (CE1)
          Length = 366

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXA-AAAKENMFVKXYXY 25
           + EN+AAAQE             +G  T D  A AAA +++FV  + Y
Sbjct: 319 KDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366



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>ALF2_CAEEL (P46563) Fructose-bisphosphate aldolase 2 (EC 4.1.2.13) (Aldolase|
           CE-2) (CE2)
          Length = 366

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXAAAAKENMFVKXYXY 25
           + EN+AAAQ+             LG    +  A AA E++FV  + Y
Sbjct: 320 KDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366



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>ALDOA_PONPY (Q5NVR5) Fructose-bisphosphate aldolase A (EC 4.1.2.13)|
           (Muscle-type aldolase)
          Length = 363

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXA-AAAKENMFVKXYXY 25
           + EN+ AAQE              G  T  G A AAA E++FV  + Y
Sbjct: 316 KKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363



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>ALDOA_HUMAN (P04075) Fructose-bisphosphate aldolase A (EC 4.1.2.13)|
           (Muscle-type aldolase) (Lung cancer antigen NY-LU-1)
          Length = 363

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXA-AAAKENMFVKXYXY 25
           + EN+ AAQE              G  T  G A AAA E++FV  + Y
Sbjct: 316 KKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 363



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>ALDOA_RABIT (P00883) Fructose-bisphosphate aldolase A (EC 4.1.2.13)|
           (Muscle-type aldolase)
          Length = 363

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 165 RPENVAAAQEXXXXXXXXXXXXXLGXNTSDGXA-AAAKENMFVKXYXY 25
           + EN+ AAQE              G  T  G A AAA E++F+  + Y
Sbjct: 316 KKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,093,834
Number of Sequences: 219361
Number of extensions: 73742
Number of successful extensions: 174
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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