ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 167 1e-38
2gb|AY103557.1| Zea mays PCO070710 mRNA sequence 103 2e-19
3gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 101 7e-19
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 101 7e-19
5dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 7e-19
6dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 7e-19
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 101 7e-19
8dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-14
9gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 80 2e-12
10dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 80 2e-12
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 3e-05
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 3e-05
13emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 56 3e-05
14gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.13
15emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.13
16emb|BX640436.1| Bordetella parapertussis strain 12822, complete ... 44 0.13
17emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 44 0.13
18ref|XM_548078.2| PREDICTED: Canis familiaris similar to RUN doma... 42 0.52
19gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 0.52
20gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 2.1
21gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2)... 40 2.1
22gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 2.1
23ref|XM_587886.2| PREDICTED: Bos taurus similar to RUN domain con... 40 2.1
24ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett... 40 2.1
25ref|XM_869403.1| PREDICTED: Bos taurus similar to dead end homol... 40 2.1
26gb|AY541280.1| Homo sapiens methyl CpG binding protein 2 isoform... 40 2.1
27ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-C... 40 2.1
28gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9... 40 2.1
29emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 2.1
30emb|BX538060.1|HSM806231 Homo sapiens mRNA; cDNA DKFZp686A24160 ... 40 2.1
31gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromo... 40 2.1
32emb|CR604541.1| full-length cDNA clone CS0DC024YJ12 of Neuroblas... 40 2.1
33emb|CR598471.1| full-length cDNA clone CS0DC015YE07 of Neuroblas... 40 2.1
34gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, c... 40 2.1
35gb|AF295597.1|AF295597 Macaca fascicularis methyl-CpG-binding pr... 40 2.1
36dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 2.1
37emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-bindin... 40 2.1
38gb|L37298.1|HUMMECP Homo sapiens methyl-CpG-binding protein (MeC... 40 2.1
39gb|BC011612.1| Homo sapiens methyl CpG binding protein 2 (Rett s... 40 2.1
40emb|X89430.1|HSRNACPGB H.sapiens mRNA for methyl CpG binding pro... 40 2.1
41emb|X94628.1|HSMECP2 H.sapiens MeCP-2 gene 40 2.1
42emb|X99686.1|HSMECP2X H.sapiens mRNA for methyl-CpG-binding prot... 40 2.1
43emb|Y12643.1|HSMECPG2 H.sapiens mRNA for methyl-CpG-binding prot... 40 2.1
44gb|BC056379.1| Mus musculus RIKEN cDNA 9630031F12 gene, mRNA (cD... 38 8.1
45ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA 38 8.1
46gb|BC034732.1| Homo sapiens BM88 antigen, mRNA (cDNA clone MGC:3... 38 8.1
47gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q... 38 8.1
48emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 38 8.1
49ref|XM_845849.1| PREDICTED: Canis familiaris similar to BTB (POZ... 38 8.1
50gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome ... 38 8.1
51gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 8.1
52gb|AY055110.1| Xanthomonas oryzae pv. oryzae KACC10331 BAC clone... 38 8.1
53gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, com... 38 8.1
54gb|AY304478.1| Homo sapiens BM88 antigen (BM88) gene, complete cds 38 8.1
55emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 38 8.1
56emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 38 8.1
57emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 38 8.1
58gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, compl... 38 8.1
59dbj|AB243405.1| Streptomyces albulus chloramphenicol resistance ... 38 8.1
60dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 38 8.1
61emb|CR625795.1| full-length cDNA clone CS0DB005YJ08 of Neuroblas... 38 8.1
62emb|CR625212.1| full-length cDNA clone CS0DC011YD20 of Neuroblas... 38 8.1
63emb|CR623643.1| full-length cDNA clone CS0DF014YG17 of Fetal bra... 38 8.1
64gb|AE005693.1| Caulobacter crescentus CB15 section 19 of 359 of ... 38 8.1
65dbj|AK074547.1| Homo sapiens cDNA FLJ90066 fis, clone HEMBA10035... 38 8.1
66emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in... 38 8.1
67dbj|AK142034.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 38 8.1
68dbj|AK132390.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 38 8.1
69dbj|AK164408.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 38 8.1
70ref|XM_688654.1| PREDICTED: Danio rerio similar to Fibrinogen-li... 38 8.1
71dbj|AK081567.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 38 8.1
72gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 8.1
73dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.1
74ref|NM_016564.2| Homo sapiens BM88 antigen (BM88), mRNA 38 8.1
75gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, co... 38 8.1
76gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, com... 38 8.1
77ref|NM_021416.2| Mus musculus RIKEN cDNA 9630031F12 gene (963003... 38 8.1
78dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.1
79dbj|AB093291.1| Mus musculus mRNA for mKIAA1276 protein 38 8.1
80dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:C... 38 8.1
81ref|NM_208279.1| Eremothecium gossypii ABL021Cp (ABL021C), mRNA 38 8.1
82dbj|AK064876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.1
83emb|CT030148.2| Kuenenia stuttgartiensis genome fragment KUST_A ... 38 8.1
84gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 38 8.1
85dbj|AB101584.1| Bifidobacterium bifidum alr gene for alanine rac... 38 8.1
86gb|U94420.1|AVU94420 Azotobacter vinelandii aldehyde dehydrogena... 38 8.1
87gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription... 38 8.1
88gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 8.1
89dbj|AP001999.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 8.1 
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  167 bits (84), Expect = 1e-38
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                        
Query: 23   cagtanctgtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctg 82
            ||||| ||||||| |||||||||||||  ||| ||||| || ||||||| ||||||||||
Sbjct: 1264 cagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcgctg 1205

                                                                        
Query: 83   gtgttntttccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgc 142
            ||||  || || |||||||||||||||  |||||||||||||||||| ||||||||||||
Sbjct: 1204 gtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagaagcgcctcctgc 1145

                                     
Query: 143  gctgccgcgacgttctccggccgcc 167
            || |||||||||||||| |||||||
Sbjct: 1144 gccgccgcgacgttctctggccgcc 1120
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>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score =  103 bits (52), Expect = 2e-19
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                        
Query: 24   agtanctgtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctgg 83
            |||| ||||||| ||||||||||||   ||| |||||  | ||||||| |||||||  ||
Sbjct: 1404 agtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcggagg 1345

                                                                        
Query: 84   tgttntttccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcg 143
            |||  || || |||||||||||||||  |||||||||||||||||||||||| |||||||
Sbjct: 1344 tgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcgtcctgcg 1285

             
Query: 144  c 144
            |
Sbjct: 1284 c 1284
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                         
Query: 31    gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
             ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 63362 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 63421

                                                                         
Query: 91    tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgctgccgc 150
              || ||||||||||| |||  |||||||||||| || |||||||| |||||||| |||  
Sbjct: 63422 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 63481

                          
Query: 151   gacgttctccggc 163
              ||||||||||||
Sbjct: 63482 cacgttctccggc 63494
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                           
Query: 31      gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
               ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 3469407 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3469466

                                                                           
Query: 91      tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgctgccgc 150
                || ||||||||||| |||  |||||||||||| || |||||||| |||||||| |||  
Sbjct: 3469467 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3469526

                            
Query: 151     gacgttctccggc 163
                ||||||||||||
Sbjct: 3469527 cacgttctccggc 3469539
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>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                        
Query: 31   gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
            ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 1252 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1193

                                                                        
Query: 91   tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgctgccgc 150
             || ||||||||||| |||  |||||||||||| || |||||||| |||||||| |||  
Sbjct: 1192 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1133

                         
Query: 151  gacgttctccggc 163
             ||||||||||||
Sbjct: 1132 cacgttctccggc 1120
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>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/133 (83%)
 Strand = Plus / Minus

                                                                        
Query: 31   gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
            ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 1248 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 1189

                                                                        
Query: 91   tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgctgccgc 150
             || ||||||||||| |||  |||||||||||| || |||||||| |||||||| |||  
Sbjct: 1188 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 1129

                         
Query: 151  gacgttctccggc 163
             ||||||||||||
Sbjct: 1128 cacgttctccggc 1116
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  101 bits (51), Expect = 7e-19
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                           
Query: 31      gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
               ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 3478111 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 3478170

                                                                           
Query: 91      tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgctgccgc 150
                || ||||||||||| |||  |||||||||||| || |||||||| |||||||| |||  
Sbjct: 3478171 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgccgcctt 3478230

                            
Query: 151     gacgttctccggc 163
                ||||||||||||
Sbjct: 3478231 cacgttctccggc 3478243
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>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 65   gcggcctngccgtcgctggtgttntttccnagctgcgccagggagnnggccttggcgcgc 124
            ||||||| ||||||||||||||  || || ||||||||||| |||  |||||||||||| 
Sbjct: 1209 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcgg 1150

                                                   
Query: 125  agcagcagcgcctcctgcgctgccgcgacgttctccggc 163
            || |||||||| |||||||| |||   ||||||||||||
Sbjct: 1149 aggagcagcgcgtcctgcgccgccttcacgttctccggc 1111
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>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 94/114 (82%)
 Strand = Plus / Minus

                                                                        
Query: 31   gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
            ||||| |||||||||||||   || |||||  | ||||| | ||||||||||||||  ||
Sbjct: 1144 gtagttcttgacgaacatgccttccttggcctcggcggcttcgccgtcgctggtgtactt 1085

                                                                  
Query: 91   tccnagctgcgccagggagnnggccttggcgcgcagcagcagcgcctcctgcgc 144
             || ||||||||||| |||  |||||||||||| || |||||||| ||||||||
Sbjct: 1084 gccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgtcctgcgc 1031
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>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 31   gtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttntt 90
            ||||| |||||||||||||  ||| |||||  | ||||||| ||||||||||||||  ||
Sbjct: 2780 gtagttcttgacgaacatgccctccttggcctcggcggcctcgccgtcgctggtgtactt 2721

                                                      
Query: 91   tccnagctgcgccagggagnnggccttggcgcgcagcagcag 132
             || ||||||||||| |||  |||||||||||| || |||||
Sbjct: 2720 gccgagctgcgccagcgagttggccttggcgcggaggagcag 2679
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                           
Query: 30      tgtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttnt 89
               |||||| |||||||||||||  |||  ||||  | ||||||| ||||||||||||||  |
Sbjct: 3543505 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 3543446

                               
Query: 90      ttccnagctgcgccag 105
               | || |||||||||||
Sbjct: 3543445 tgccgagctgcgccag 3543430



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 138     cctgcgctgccgcgacgttctccggccg 165
               ||||||| ||||||||||||||| ||||
Sbjct: 3543420 cctgcgccgccgcgacgttctcccgccg 3543393
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                           
Query: 30      tgtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttnt 89
               |||||| |||||||||||||  |||  ||||  | ||||||| ||||||||||||||  |
Sbjct: 3543450 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 3543391

                               
Query: 90      ttccnagctgcgccag 105
               | || |||||||||||
Sbjct: 3543390 tgccgagctgcgccag 3543375



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 138     cctgcgctgccgcgacgttctccggccg 165
               ||||||| ||||||||||||||| ||||
Sbjct: 3543365 cctgcgccgccgcgacgttctcccgccg 3543338
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 30    tgtagtncttgacgaacatgttctctttggcagctgcggcctngccgtcgctggtgttnt 89
             |||||| |||||||||||||  |||  ||||  | ||||||| ||||||||||||||  |
Sbjct: 58433 tgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgctggtgtact 58374

                             
Query: 90    ttccnagctgcgccag 105
             | || |||||||||||
Sbjct: 58373 tgccgagctgcgccag 58358



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 138   cctgcgctgccgcgacgttctccggccg 165
             ||||||| ||||||||||||||| ||||
Sbjct: 58348 cctgcgccgccgcgacgttctcccgccg 58321
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 119    gcgcgcagcagcagcgcctcctgcgc 144
              ||||||||||||||||| ||||||||
Sbjct: 631404 gcgcgcagcagcagcgcatcctgcgc 631429
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    ccttggcgcgcagcagcagcgc 135
              ||||||||||||||||||||||
Sbjct: 309021 ccttggcgcgcagcagcagcgc 309000



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    gcgcgcagcagcagcgcctcctgc 142
              ||||||||||||||||| ||||||
Sbjct: 222907 gcgcgcagcagcagcgcttcctgc 222884
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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    ccttggcgcgcagcagcagcgc 135
              ||||||||||||||||||||||
Sbjct: 101392 ccttggcgcgcagcagcagcgc 101371
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 114    ccttggcgcgcagcagcagcgc 135
              ||||||||||||||||||||||
Sbjct: 281832 ccttggcgcgcagcagcagcgc 281853
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>ref|XM_548078.2| PREDICTED: Canis familiaris similar to RUN domain containing 1
           (LOC490955), mRNA
          Length = 2110

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 120 cgcgcagcagcagcgcctcctgcgc 144
           |||| ||||||||||||||||||||
Sbjct: 348 cgcggagcagcagcgcctcctgcgc 372
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 120     cgcgcagcagcagcgcctcctgcgc 144
               ||||||||||||||||| |||||||
Sbjct: 5068387 cgcgcagcagcagcgccgcctgcgc 5068411
to top
>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    acatgttctctttggcagct 64
             ||||||||||||||||||||
Sbjct: 27603 acatgttctctttggcagct 27584
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>gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2) mRNA, complete cds
          Length = 10182

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1226 gcgcagcagcagcgcctcct 1245
to top
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     acatgttctctttggcagct 64
              ||||||||||||||||||||
Sbjct: 323939 acatgttctctttggcagct 323958
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>ref|XM_587886.2| PREDICTED: Bos taurus similar to RUN domain containing 1,
           transcript variant 1 (LOC539525), mRNA
          Length = 1842

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 agcagcagcgcctcctgcgc 144
           ||||||||||||||||||||
Sbjct: 353 agcagcagcgcctcctgcgc 372
to top
>ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2),
            mRNA
          Length = 10182

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1226 gcgcagcagcagcgcctcct 1245
to top
>ref|XM_869403.1| PREDICTED: Bos taurus similar to dead end homolog 1 (LOC525516),
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gcagcagcagcgcctcctgc 142
           ||||||||||||||||||||
Sbjct: 514 gcagcagcagcgcctcctgc 495
to top
>gb|AY541280.1| Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA,
            complete cds
          Length = 1504

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1102 gcgcagcagcagcgcctcct 1121
to top
>ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-CpG-binding protein 2
            (MeCP-2 protein) (MeCP2), transcript variant 1
            (LOC612973), mRNA
          Length = 1793

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1264 gcgcagcagcagcgcctcct 1283
to top
>gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9, I104-219D,
             L110-C1837 map q28, complete sequence
          Length = 112752

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gcgcagcagcagcgcctcct 140
             ||||||||||||||||||||
Sbjct: 22241 gcgcagcagcagcgcctcct 22222
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    gcgcgcagcagcagcgcctcctgc 142
              ||||||||||||||||| ||||||
Sbjct: 315571 gcgcgcagcagcagcgcttcctgc 315548
to top
>emb|BX538060.1|HSM806231 Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160)
          Length = 1763

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1151 gcgcagcagcagcgcctcct 1170
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>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete
              sequence
          Length = 207834

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    gcgcagcagcagcgcctcct 140
              ||||||||||||||||||||
Sbjct: 179458 gcgcagcagcagcgcctcct 179439
to top
>emb|CR604541.1| full-length cDNA clone CS0DC024YJ12 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1524

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1033 gcgcagcagcagcgcctcct 1052
to top
>emb|CR598471.1| full-length cDNA clone CS0DC015YE07 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1536

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1036 gcgcagcagcagcgcctcct 1055
to top
>gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, complete cds
          Length = 1180

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 cgcgcagcagcagcgcctcc 139
           ||||||||||||||||||||
Sbjct: 248 cgcgcagcagcagcgcctcc 229
to top
>gb|AF295597.1|AF295597 Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA,
            complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1059 gcgcagcagcagcgcctcct 1078
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 126     gcagcagcgcctcctgcgctgccgcgac 153
               ||||||||||| ||||||| ||||||||
Sbjct: 5541341 gcagcagcgccgcctgcgccgccgcgac 5541368
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>emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-binding protein 2
          Length = 10091

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1134 gcgcagcagcagcgcctcct 1153
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>gb|L37298.1|HUMMECP Homo sapiens methyl-CpG-binding protein (MeCP-2) mRNA, complete cds
          Length = 1669

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1140 gcgcagcagcagcgcctcct 1159
to top
>gb|BC011612.1| Homo sapiens methyl CpG binding protein 2 (Rett syndrome), mRNA (cDNA
            clone MGC:10245 IMAGE:3956518), complete cds
          Length = 1716

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1143 gcgcagcagcagcgcctcct 1162
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>emb|X89430.1|HSRNACPGB H.sapiens mRNA for methyl CpG binding protein 2
          Length = 2351

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1030 gcgcagcagcagcgcctcct 1049
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>emb|X94628.1|HSMECP2 H.sapiens MeCP-2 gene
          Length = 2718

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 gcgcagcagcagcgcctcct 140
           ||||||||||||||||||||
Sbjct: 730 gcgcagcagcagcgcctcct 711
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>emb|X99686.1|HSMECP2X H.sapiens mRNA for methyl-CpG-binding protein 2
          Length = 1533

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1133 gcgcagcagcagcgcctcct 1152
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>emb|Y12643.1|HSMECPG2 H.sapiens mRNA for methyl-CpG-binding protein 2
          Length = 1652

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  gcgcagcagcagcgcctcct 140
            ||||||||||||||||||||
Sbjct: 1123 gcgcagcagcagcgcctcct 1142
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>gb|BC056379.1| Mus musculus RIKEN cDNA 9630031F12 gene, mRNA (cDNA clone MGC:65656
            IMAGE:6850901), complete cds
          Length = 3966

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 120  cgcgcagcagcagcgcctcctgc 142
            |||||||| ||||||||||||||
Sbjct: 2224 cgcgcagctgcagcgcctcctgc 2202
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>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA
          Length = 2437

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  cgcgcagcagcagcgcctc 138
            |||||||||||||||||||
Sbjct: 1098 cgcgcagcagcagcgcctc 1080
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>gb|BC034732.1| Homo sapiens BM88 antigen, mRNA (cDNA clone MGC:34326 IMAGE:5179740),
            complete cds
          Length = 1661

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1488 ccttggcgcgcagcagcag 1506
to top
>gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q24.13, complete
             sequence
          Length = 198700

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 48    tgttctctttggcagctgc 66
             |||||||||||||||||||
Sbjct: 36084 tgttctctttggcagctgc 36066
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    tggcgcgcagcagcagcgc 135
              |||||||||||||||||||
Sbjct: 496547 tggcgcgcagcagcagcgc 496565
to top
>ref|XM_845849.1| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing
           11 isoform 3, transcript variant 2 (LOC481292), mRNA
          Length = 3430

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 gcgcagcagcagcgcctcc 139
           |||||||||||||||||||
Sbjct: 330 gcgcagcagcagcgcctcc 312
to top
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence
          Length = 182835

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 120   cgcgcagcagcagcgcctc 138
             |||||||||||||||||||
Sbjct: 77157 cgcgcagcagcagcgcctc 77139
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 112     ggccttggcgcgcagcagc 130
               |||||||||||||||||||
Sbjct: 1335326 ggccttggcgcgcagcagc 1335308
to top
>gb|AY055110.1| Xanthomonas oryzae pv. oryzae KACC10331 BAC clone 4K15, complete
            sequence
          Length = 100258

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 117  tggcgcgcagcagcagcgc 135
            |||||||||||||||||||
Sbjct: 5509 tggcgcgcagcagcagcgc 5491
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>gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, complete sequence
          Length = 208055

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   cgcgcagcagcagcgcctcctgc 142
             |||||||| ||||||||||||||
Sbjct: 33554 cgcgcagctgcagcgcctcctgc 33532
to top
>gb|AY304478.1| Homo sapiens BM88 antigen (BM88) gene, complete cds
          Length = 3834

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 3222 ccttggcgcgcagcagcag 3240
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 118    ggcgcgcagcagcagcgcc 136
              |||||||||||||||||||
Sbjct: 324255 ggcgcgcagcagcagcgcc 324273
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   ggcgcgcagcagcagcgcc 136
             |||||||||||||||||||
Sbjct: 83642 ggcgcgcagcagcagcgcc 83660
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 118    ggcgcgcagcagcagcgcc 136
              |||||||||||||||||||
Sbjct: 163519 ggcgcgcagcagcagcgcc 163537
to top
>gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, complete sequence
          Length = 191727

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 120    cgcgcagcagcagcgcctcctgc 142
              |||||||| ||||||||||||||
Sbjct: 188841 cgcgcagctgcagcgcctcctgc 188863
to top
>dbj|AB243405.1| Streptomyces albulus chloramphenicol resistance protein, putative
            membrane protein, putative D-amino acid oxidase (dao),
            putative carboxypeptidase, putative X-Pro
            dipeptidyl-peptidase, epsilon-poly-L-lysine-degrading
            enzyme (pld), hypothetical protein, hypothetical protein,
            hypothetical protein genes, partial and complete cds
          Length = 11723

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 118  ggcgcgcagcagcagcgcc 136
            |||||||||||||||||||
Sbjct: 1494 ggcgcgcagcagcagcgcc 1512
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 117   tggcgcgcagcagcagcgc 135
             |||||||||||||||||||
Sbjct: 80598 tggcgcgcagcagcagcgc 80580
to top
>emb|CR625795.1| full-length cDNA clone CS0DB005YJ08 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1571

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1451 ccttggcgcgcagcagcag 1469
to top
>emb|CR625212.1| full-length cDNA clone CS0DC011YD20 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1547

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1443 ccttggcgcgcagcagcag 1461
to top
>emb|CR623643.1| full-length cDNA clone CS0DF014YG17 of Fetal brain of Homo sapiens
            (human)
          Length = 1537

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1404 ccttggcgcgcagcagcag 1422
to top
>gb|AE005693.1| Caulobacter crescentus CB15 section 19 of 359 of the complete genome
          Length = 10756

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 117  tggcgcgcagcagcagcgcctcctgcg 143
            |||||||||||| | ||||||||||||
Sbjct: 8072 tggcgcgcagcaccggcgcctcctgcg 8046
to top
>dbj|AK074547.1| Homo sapiens cDNA FLJ90066 fis, clone HEMBA1003530, weakly similar to
            S.scrofa mRNA for BM88 antigen
          Length = 1648

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1498 ccttggcgcgcagcagcag 1516
to top
>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14,
              complete sequence
          Length = 197865

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    gcagcagcagcgcctcctg 141
              |||||||||||||||||||
Sbjct: 160863 gcagcagcagcgcctcctg 160881
to top
>dbj|AK142034.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230009L10 product:forkhead box D1, full
            insert sequence
          Length = 2839

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  cgcgcagcagcagcgcctc 138
            |||||||||||||||||||
Sbjct: 1112 cgcgcagcagcagcgcctc 1094
to top
>dbj|AK132390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4122401E09 product:forkhead box D1, full
            insert sequence
          Length = 2445

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  cgcgcagcagcagcgcctc 138
            |||||||||||||||||||
Sbjct: 1108 cgcgcagcagcagcgcctc 1090
to top
>dbj|AK164408.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230010K09 product:forkhead box D1, full
            insert sequence
          Length = 2461

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  cgcgcagcagcagcgcctc 138
            |||||||||||||||||||
Sbjct: 1112 cgcgcagcagcagcgcctc 1094
to top
>ref|XM_688654.1| PREDICTED: Danio rerio similar to Fibrinogen-like protein 1 precursor
            (Hepatocyte-derived fibrinogen-related protein 1)
            (HFREP-1) (Hepassocin) (HP-041) (LOC565378), mRNA
          Length = 2343

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 123  gcagcagcagcgcctcctg 141
            |||||||||||||||||||
Sbjct: 1721 gcagcagcagcgcctcctg 1703
to top
>dbj|AK081567.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130042N08 product:hypothetical protein,
            full insert sequence
          Length = 3887

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 120  cgcgcagcagcagcgcctcctgc 142
            |||||||| ||||||||||||||
Sbjct: 2206 cgcgcagctgcagcgcctcctgc 2184
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 117     tggcgcgcagcagcagcgc 135
               |||||||||||||||||||
Sbjct: 4456950 tggcgcgcagcagcagcgc 4456968
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 122      cgcagcagcagcgcctcct 140
                |||||||||||||||||||
Sbjct: 22087113 cgcagcagcagcgcctcct 22087095
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>ref|NM_016564.2| Homo sapiens BM88 antigen (BM88), mRNA
          Length = 1642

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ccttggcgcgcagcagcag 132
            |||||||||||||||||||
Sbjct: 1498 ccttggcgcgcagcagcag 1516
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>gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, complete sequence
          Length = 198899

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 48    tgttctctttggcagctgc 66
             |||||||||||||||||||
Sbjct: 36281 tgttctctttggcagctgc 36263
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>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence
          Length = 178778

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    ccttggcgcgcagcagcag 132
              |||||||||||||||||||
Sbjct: 151544 ccttggcgcgcagcagcag 151562
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>ref|NM_021416.2| Mus musculus RIKEN cDNA 9630031F12 gene (9630031F12Rik), mRNA
          Length = 3966

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 120  cgcgcagcagcagcgcctcctgc 142
            |||||||| ||||||||||||||
Sbjct: 2224 cgcgcagctgcagcgcctcctgc 2202
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>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1151A10
          Length = 124344

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 122   cgcagcagcagcgcctcct 140
             |||||||||||||||||||
Sbjct: 98626 cgcagcagcagcgcctcct 98608
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>dbj|AB093291.1| Mus musculus mRNA for mKIAA1276 protein
          Length = 3628

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 120  cgcgcagcagcagcgcctcctgc 142
            |||||||| ||||||||||||||
Sbjct: 1946 cgcgcagctgcagcgcctcctgc 1924
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>dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-55F22, complete
             sequence
          Length = 129989

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   ccttggcgcgcagcagcag 132
             |||||||||||||||||||
Sbjct: 82149 ccttggcgcgcagcagcag 82131
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>ref|NM_208279.1| Eremothecium gossypii ABL021Cp (ABL021C), mRNA
          Length = 720

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 119 gcgcgcagcagcagcgcct 137
           |||||||||||||||||||
Sbjct: 362 gcgcgcagcagcagcgcct 380
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>dbj|AK064876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J16, full
           insert sequence
          Length = 1256

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 cgcagcagcagcgcctcct 140
           |||||||||||||||||||
Sbjct: 18  cgcagcagcagcgcctcct 36
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>emb|CT030148.2| Kuenenia stuttgartiensis genome fragment KUST_A (1 of 5)
          Length = 96717

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    cttgacgaacatgttctct 55
             |||||||||||||||||||
Sbjct: 68212 cttgacgaacatgttctct 68230
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   tggcgcgcagcagcagcgc 135
             |||||||||||||||||||
Sbjct: 96362 tggcgcgcagcagcagcgc 96380
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>dbj|AB101584.1| Bifidobacterium bifidum alr gene for alanine racemase, complete cds
          Length = 1419

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 121 gcgcagcagcagcgcctcctgcg 143
           |||||||||||||||||| ||||
Sbjct: 354 gcgcagcagcagcgcctcatgcg 332
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>gb|U94420.1|AVU94420 Azotobacter vinelandii aldehyde dehydrogenase (aldh) gene, partial
           cds, cytochrome c5 (cycB) gene, complete cds, and
           xanthine phosphoribosyltransferase-like protein (xrpt)
           gene, partial cds
          Length = 1521

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 120 cgcgcagcagcagcgcctc 138
           |||||||||||||||||||
Sbjct: 380 cgcgcagcagcagcgcctc 362
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>gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription factor (BF-2) mRNA,
            complete cds
          Length = 2437

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  cgcgcagcagcagcgcctc 138
            |||||||||||||||||||
Sbjct: 1098 cgcgcagcagcagcgcctc 1080
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    gcgcgcagcagcagcgcct 137
              |||||||||||||||||||
Sbjct: 358633 gcgcgcagcagcagcgcct 358615
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>dbj|AP001999.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-469N6, complete
             sequence
          Length = 172504

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   gcagcagcagcgcctcctg 141
             |||||||||||||||||||
Sbjct: 48441 gcagcagcagcgcctcctg 48459


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,056,116
Number of Sequences: 3902068
Number of extensions: 1056116
Number of successful extensions: 65772
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64405
Number of HSP's gapped (non-prelim): 1362
length of query: 167
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 145
effective length of database: 17,147,199,772
effective search space: 2486343966940
effective search space used: 2486343966940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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