>gb|AC158548.10| Mus musculus chromosome 5, clone RP23-258F17, complete sequence
          Length = 227065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     tttacatcattttttcctttc 68
              |||||||||||||||||||||
Sbjct: 190164 tttacatcattttttcctttc 190184

>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   ctgaagcattagcagcggtgt 298
             |||||||||||||||||||||
Sbjct: 89375 ctgaagcattagcagcggtgt 89355

>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 455    ctgtcccaccactgtaagcag 475
              |||||||||||||||||||||
Sbjct: 108393 ctgtcccaccactgtaagcag 108413

>gb|AC120861.7| Mus musculus chromosome 5, clone RP23-60J23, complete sequence
          Length = 239102

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     tttacatcattttttcctttc 68
              |||||||||||||||||||||
Sbjct: 153052 tttacatcattttttcctttc 153032

>gb|AC098885.3| Mus musculus BAC clone RP23-122L17 from 5, complete sequence
          Length = 211112

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     ttacatcattttttcctttcgtttt 73
              |||||||||||||||||||| ||||
Sbjct: 105530 ttacatcattttttcctttcttttt 105554

>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence
          Length = 183544

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 456    tgtcccaccactgtaagcagc 476
              |||||||||||||||||||||
Sbjct: 115374 tgtcccaccactgtaagcagc 115394

>emb|CR556704.4| Mouse DNA sequence from clone RP23-324J18 on chromosome X, complete
           sequence
          Length = 199507

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 45  aagtttacatcattttttcct 65
           |||||||||||||||||||||
Sbjct: 289 aagtttacatcattttttcct 309



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aagtttacatcattttttcc 64
             ||||||||||||||||||||
Sbjct: 77693 aagtttacatcattttttcc 77712

>emb|AL671211.11| Mouse DNA sequence from clone RP23-29K3 on chromosome X, complete
             sequence
          Length = 147573

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    aagtttacatcattttttcct 65
             |||||||||||||||||||||
Sbjct: 94855 aagtttacatcattttttcct 94875



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aagtttacatcattttttcc 64
             ||||||||||||||||||||
Sbjct: 27453 aagtttacatcattttttcc 27472

>dbj|AK042527.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730001J21
            product:unclassifiable, full insert sequence
          Length = 2674

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 456  tgtcccaccactgtaagcagc 476
            |||||||||||||||||||||
Sbjct: 2523 tgtcccaccactgtaagcagc 2543

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 194      gtttcatctcttctttccttc 214
                |||||||||||||||||||||
Sbjct: 36739596 gtttcatctcttctttccttc 36739576

>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   gtttcatctcttctttccttc 214
             |||||||||||||||||||||
Sbjct: 65911 gtttcatctcttctttccttc 65891

>gb|AC140440.3| Mus musculus BAC clone RP23-71A13 from chromosome unknown, complete
              sequence
          Length = 199043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     aagtttacatcattttttcct 65
              |||||||||||||||||||||
Sbjct: 138252 aagtttacatcattttttcct 138232



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aagtttacatcattttttcc 64
             ||||||||||||||||||||
Sbjct: 60852 aagtttacatcattttttcc 60833

>emb|BX571729.9| Mouse DNA sequence from clone RP23-187P8 on chromosome X, complete
             sequence
          Length = 241971

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    aagtttacatcattttttcct 65
             |||||||||||||||||||||
Sbjct: 35797 aagtttacatcattttttcct 35817

>gb|AC154459.2| Mus musculus BAC clone RP24-162O6 from 17, complete sequence
          Length = 163506

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   ctctttgtccccaccaccacc 359
             |||||||||||||||||||||
Sbjct: 36974 ctctttgtccccaccaccacc 36954

>gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, complete sequence
          Length = 152500

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 455    ctgtcccaccactgtaagcag 475
              |||||||||||||||||||||
Sbjct: 115960 ctgtcccaccactgtaagcag 115980

>gb|AC120405.7| Mus musculus chromosome 1, clone RP24-409F22, complete sequence
          Length = 158876

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 181   gatccctttgtgagtttcatctcttctttcct 212
             ||||||| | ||||||||||||| ||||||||
Sbjct: 83693 gatccctgtctgagtttcatctcatctttcct 83724

>gb|AC084196.1| Caenorhabditis elegans cosmid Y55D5A, complete sequence
          Length = 86523

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    tcattttttcctttcgtttt 73
             ||||||||||||||||||||
Sbjct: 54259 tcattttttcctttcgtttt 54240

>gb|AC158392.2| Mus musculus BAC clone RP24-87B5 from chromosome 14, complete sequence
          Length = 187798

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tttcatctcttctttccttc 214
             ||||||||||||||||||||
Sbjct: 26513 tttcatctcttctttccttc 26494

>ref|XM_737228.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000818.01.0)
           partial mRNA
          Length = 1191

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  gtaagtttacatcatttttt 62
           ||||||||||||||||||||
Sbjct: 823 gtaagtttacatcatttttt 804

>emb|BX649466.19| Zebrafish DNA sequence from clone DKEY-31C8 in linkage group 12,
            complete sequence
          Length = 101015

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  acaaattgatccctttgtga 193
            ||||||||||||||||||||
Sbjct: 7570 acaaattgatccctttgtga 7551

>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23,
             complete sequence
          Length = 133759

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   agcttcttcgaagcaaaaac 406
             ||||||||||||||||||||
Sbjct: 82911 agcttcttcgaagcaaaaac 82930

>gb|AC156617.8| Mus musculus chromosome 7, clone RP23-311N3, complete sequence
          Length = 203647

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tttcatctcttctttccttc 214
             ||||||||||||||||||||
Sbjct: 34768 tttcatctcttctttccttc 34749

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 387      agcttcttcgaagcaaaaac 406
                ||||||||||||||||||||
Sbjct: 19794449 agcttcttcgaagcaaaaac 19794468

>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence
          Length = 194086

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 181  gatccctttgtgagtttcatctcttctttcct 212
            ||||||| | ||||||||||||| ||||||||
Sbjct: 5647 gatccctgtctgagtttcatctcatctttcct 5678

>emb|BX842587.2| Mouse DNA sequence from clone RP23-30A1 on chromosome X, complete
             sequence
          Length = 45051

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aagtttacatcattttttcc 64
             ||||||||||||||||||||
Sbjct: 27453 aagtttacatcattttttcc 27472

>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete
             sequence
          Length = 206957

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tttcatctcttctttccttc 214
             ||||||||||||||||||||
Sbjct: 15478 tttcatctcttctttccttc 15497

>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
             sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   tttccttcatatgggttttg 226
             ||||||||||||||||||||
Sbjct: 77191 tttccttcatatgggttttg 77210

>gb|AC110186.10| Mus musculus chromosome 7, clone RP24-503J9, complete sequence
          Length = 168058

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    tttcatctcttctttccttc 214
              ||||||||||||||||||||
Sbjct: 143374 tttcatctcttctttccttc 143355

>emb|AL772304.2| Mouse DNA sequence from clone RP23-401E12 on chromosome 4, complete
            sequence
          Length = 115477

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  aagcaaaaactctcagatta 416
            ||||||||||||||||||||
Sbjct: 8900 aagcaaaaactctcagatta 8881


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,085,764
Number of Sequences: 3902068
Number of extensions: 7085764
Number of successful extensions: 132732
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132583
Number of HSP's gapped (non-prelim): 149
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)