ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11b19 |
|---|---|
| Clone Library Name | barley_pub |
>SPD1_ORYSA (Q9SMB1) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 323 Score = 124 bits (312), Expect = 4e-29 Identities = 56/67 (83%), Positives = 64/67 (95%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCSTEGP+VDFQHP+F+IED+E+STKSKGPLK YNSE H+ASFCLPSFA+R Sbjct: 257 YPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSEIHSASFCLPSFAKR 316 Query: 218 VIEAKAN 198 VI +KAN Sbjct: 317 VIGSKAN 323
>SPD2_HYONI (O48659) Spermidine synthase 2 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 2) (SPDSY 2) Length = 308 Score = 105 bits (261), Expect = 3e-23 Identities = 47/66 (71%), Positives = 58/66 (87%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCSTEGP+VDF++P+ I+ D+ TK++GPLK YNSE H+ASFCLPSFA+R Sbjct: 242 YPSGVIGFMLCSTEGPAVDFKNPINPIDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKR 301 Query: 218 VIEAKA 201 VIE+ A Sbjct: 302 VIESNA 307
>SPD1_DATST (Q96556) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 308 Score = 105 bits (261), Expect = 3e-23 Identities = 46/65 (70%), Positives = 58/65 (89%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCSTEGP+VDF++P+ ++ D+ TK++GPLK YNSE H+ASFCLPSFA+R Sbjct: 242 YPSGVIGFMLCSTEGPAVDFKNPINPVDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKR 301 Query: 218 VIEAK 204 VIE+K Sbjct: 302 VIESK 306
>SPD1_ARATH (Q9ZUB3) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 334 Score = 104 bits (259), Expect = 6e-23 Identities = 49/67 (73%), Positives = 58/67 (86%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCSTEGP VDF+HP+ I DE S+KS GPLK YN+E H+A+FCLPSFA++ Sbjct: 270 YPSGVIGFMLCSTEGPDVDFKHPLNPI--DESSSKSNGPLKFYNAEIHSAAFCLPSFAKK 327 Query: 218 VIEAKAN 198 VIE+KAN Sbjct: 328 VIESKAN 334
>SPDE_NICSY (O48660) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (Aminopropyltransferase) Length = 314 Score = 101 bits (251), Expect = 5e-22 Identities = 45/65 (69%), Positives = 55/65 (84%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGP+VDF++P+ I+DD K+ GP+K YNSE H ASFCLPSFA+R Sbjct: 248 YPSGMIGFMLCSTEGPAVDFKNPINPIDDDASHNKTLGPMKFYNSELHKASFCLPSFAKR 307 Query: 218 VIEAK 204 VIE+K Sbjct: 308 VIESK 312
>SPD2_ARATH (O48661) Spermidine synthase 2 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 2) (SPDSY 2) Length = 340 Score = 100 bits (248), Expect = 1e-21 Identities = 46/67 (68%), Positives = 56/67 (83%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCS+EGP VDF+ PV I+ DE S KS PLK YN+E H+A+FCLPSFA++ Sbjct: 274 YPSGVIGFMLCSSEGPQVDFKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKK 333 Query: 218 VIEAKAN 198 VI++KAN Sbjct: 334 VIDSKAN 340
>SPDE_COFAR (O82147) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 316 Score = 99.8 bits (247), Expect = 1e-21 Identities = 44/67 (65%), Positives = 57/67 (85%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSGVIGFMLCSTEGP VDF+HP+ I+ ++ +K+ PLK YNSE H+A+FCLPSFA++ Sbjct: 250 YPSGVIGFMLCSTEGPPVDFKHPINPIDANDGRSKTMKPLKFYNSEIHSAAFCLPSFAKK 309 Query: 218 VIEAKAN 198 VI++KAN Sbjct: 310 VIDSKAN 316
>SPD1_HYONI (O48658) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 315 Score = 96.3 bits (238), Expect = 2e-20 Identities = 46/65 (70%), Positives = 54/65 (83%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGP+VDF++P+ I DDE K+ PLK YNSE H ASFCLPSFA+R Sbjct: 250 YPSGMIGFMLCSTEGPAVDFKNPINPI-DDESGPKTIAPLKFYNSEIHQASFCLPSFAKR 308 Query: 218 VIEAK 204 VIE+K Sbjct: 309 VIESK 313
>SPDE_LYCES (Q9ZS45) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 342 Score = 96.3 bits (238), Expect = 2e-20 Identities = 47/65 (72%), Positives = 53/65 (81%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGP+VDF++P+ I DDE KS PLK YNSE H ASFCLPSFA+R Sbjct: 277 YPSGMIGFMLCSTEGPAVDFKNPINPI-DDESPAKSIEPLKFYNSEIHQASFCLPSFAKR 335 Query: 218 VIEAK 204 VIE K Sbjct: 336 VIETK 340
>SPD2_DATST (Q96557) Spermidine synthase 2 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 2) (SPDSY 2) Length = 317 Score = 95.9 bits (237), Expect = 2e-20 Identities = 44/65 (67%), Positives = 55/65 (84%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGP+VDF++P+ I+D+ + ++ GPLK YNSE H ASFCLPSFA+R Sbjct: 252 YPSGMIGFMLCSTEGPAVDFKNPINPIDDESHG-QTIGPLKFYNSEIHQASFCLPSFAKR 310 Query: 218 VIEAK 204 VIE K Sbjct: 311 VIETK 315
>SPD1_PEA (Q9ZTR1) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 334 Score = 93.2 bits (230), Expect = 1e-19 Identities = 43/67 (64%), Positives = 55/67 (82%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGPSVDF+HPV I++++ S ++ PLK YN E H+A+FCLPSFA+R Sbjct: 269 YPSGMIGFMLCSTEGPSVDFKHPVNPIDEND-SQQAARPLKFYNREIHSAAFCLPSFAKR 327 Query: 218 VIEAKAN 198 I +K N Sbjct: 328 AIASKEN 334
>SPD2_PEA (Q9ZTR0) Spermidine synthase 2 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 2) (SPDSY 2) Length = 342 Score = 90.5 bits (223), Expect = 9e-19 Identities = 45/65 (69%), Positives = 51/65 (78%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGFMLCSTEGP VDF+HPV I D + KS PLK YNSE HTA+FCLPSFA+R Sbjct: 277 YPSGMIGFMLCSTEGPLVDFKHPVNPI-DQKDCQKSVRPLKFYNSEIHTAAFCLPSFAKR 335 Query: 218 VIEAK 204 I +K Sbjct: 336 KIGSK 340
>PMT1_TOBAC (Q42963) Putrescine N-methyltransferase 1 (EC 2.1.1.53) (PMT 1)| (A411) Length = 375 Score = 85.9 bits (211), Expect = 2e-17 Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSK-GPLKXYNSEFHTASFCLPSFAR 222 YP+GVIG+MLCSTEGP VDF++PV I+ + KSK GPLK YNS+ H A+F LPSFAR Sbjct: 311 YPTGVIGYMLCSTEGPEVDFKNPVNPIDKETTQVKSKLGPLKFYNSDIHKAAFILPSFAR 370 Query: 221 RVIEA 207 +IE+ Sbjct: 371 SMIES 375
>PMT3_TOBAC (Q9SEH5) Putrescine N-methyltransferase 3 (EC 2.1.1.53) (PMT 3)| Length = 381 Score = 83.6 bits (205), Expect = 1e-16 Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSK-GPLKXYNSEFHTASFCLPSFAR 222 YP+GVIG+MLCSTEGP VDF++PV I+ + KSK PLK YNS+ H A+F LPSFAR Sbjct: 317 YPTGVIGYMLCSTEGPEVDFKNPVNPIDKETTQVKSKLAPLKFYNSDIHKAAFILPSFAR 376 Query: 221 RVIEA 207 +IE+ Sbjct: 377 SMIES 381
>PMT4_TOBAC (Q9SEH4) Putrescine N-methyltransferase 4 (EC 2.1.1.53) (PMT 4)| Length = 419 Score = 83.2 bits (204), Expect = 1e-16 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSK-GPLKXYNSEFHTASFCLPSFAR 222 YP+GVIG+MLCSTEGP VDF++P+ I+ + KSK PLK YNS+ H A+F LPSFAR Sbjct: 355 YPTGVIGYMLCSTEGPEVDFKNPINPIDKETTQVKSKLAPLKFYNSDIHKAAFILPSFAR 414 Query: 221 RVIEA 207 +IE+ Sbjct: 415 SMIES 419
>PMT2_TOBAC (Q9SEH7) Putrescine N-methyltransferase 2 (EC 2.1.1.53) (PMT 2)| Length = 353 Score = 83.2 bits (204), Expect = 1e-16 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSK-GPLKXYNSEFHTASFCLPSFAR 222 YP+GVIG+MLCSTEGP +DF++PV I+ + KSK PLK YNS+ H A+F LPSFAR Sbjct: 289 YPTGVIGYMLCSTEGPEIDFKNPVNPIDKETAQVKSKLAPLKFYNSDIHKAAFILPSFAR 348 Query: 221 RVIEA 207 +IE+ Sbjct: 349 SMIES 353
>SPEE_HUMAN (P19623) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 302 Score = 58.2 bits (139), Expect = 5e-09 Identities = 30/62 (48%), Positives = 39/62 (62%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG IGFMLCS + PS +FQ PV + + + LK YNS+ H A+F LP FAR+ Sbjct: 241 YPSGQIGFMLCS-KNPSTNFQEPVQPLTQQQVAQMQ---LKYYNSDVHRAAFVLPEFARK 296 Query: 218 VI 213 + Sbjct: 297 AL 298
>SPEE_MOUSE (Q64674) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 302 Score = 54.7 bits (130), Expect = 5e-08 Identities = 28/62 (45%), Positives = 37/62 (59%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG IGFMLCS + PS +F+ PV + + LK YNS+ H A+F LP F R+ Sbjct: 241 YPSGQIGFMLCS-KNPSTNFREPVQQLTQAQVEQMQ---LKYYNSDMHRAAFVLPEFTRK 296 Query: 218 VI 213 + Sbjct: 297 AL 298
>SPEE_NEUCR (Q9Y8H7) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 291 Score = 51.2 bits (121), Expect = 6e-07 Identities = 27/63 (42%), Positives = 40/63 (63%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG IGFM+CS + P+ + + P+ S +E + + YNSE H ASF LP+FA++ Sbjct: 234 YPSGQIGFMVCSKD-PNANVKVPLRSWSQEE----EEKLCRYYNSEIHKASFILPTFAKK 288 Query: 218 VIE 210 +E Sbjct: 289 ALE 291
>SPEE_SCHPO (Q09741) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 298 Score = 48.9 bits (115), Expect = 3e-06 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPL-KXYNSEFHTASFCLPSFAR 222 YPSG IGF++ S + S+D P+ ++S + + L K YNSE H ASF LP+FAR Sbjct: 236 YPSGSIGFVVASKDA-SIDLSKPL-----RKWSPEEENKLCKYYNSEIHAASFVLPTFAR 289 Query: 221 RVIE 210 V++ Sbjct: 290 DVVD 293
>SPEE2_LEPIN (Q8EXA3) Spermidine synthase 2 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 2) (SPDSY 2) Length = 281 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+IGF CS +GP P + D + + LK Y++E H A+F LP FA++ Sbjct: 226 YPSGIIGFTYCS-KGPD-----PYTVVPDPQRVPQG---LKYYSAEMHKAAFVLPQFAQK 276 Query: 218 VIEAK 204 I K Sbjct: 277 HIVRK 281
>SPEE_YEAST (Q12074) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 293 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YP+G IGFM+CS + + + + P+ I D+ K + YN + H ASF LP++A + Sbjct: 236 YPTGTIGFMVCSKD-KTCNVKKPLREISDE----KEAELYRYYNKKIHEASFVLPTWAAK 290
>SPEE_DICDI (Q9XY92) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 284 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YP G IGF+LCS G + + P+ I + S ++ YN E H ASF LP FA + Sbjct: 229 YPGGSIGFILCSLGGST---KAPIREITPEVQSQ-----MQYYNGEVHKASFVLPQFAAK 280
>SPSY_YEAST (Q12455) Spermine synthase (EC 2.5.1.22) (Spermidine| aminopropyltransferase) (SPMSY) Length = 300 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 Y SG +G ++CS + +I + S + +G LK YN + H+++F LP++A + Sbjct: 243 YTSGQLGLIVCSNNA------NIPLNIPQRKISEQEQGKLKYYNPQIHSSAFVLPTWADK 296 Query: 218 VI 213 VI Sbjct: 297 VI 298
>SPEE_THEMA (Q9WZC2) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 296 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -3 Query: 398 YPSGVIGFMLCSTE-GPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFAR 222 YPSG+ + S P DF D E K LK YN E H ASF LP+F + Sbjct: 239 YPSGMWSYTFASKGIDPIKDF--------DPEKVRKFNKELKYYNEEVHVASFALPNFVK 290 Query: 221 R 219 + Sbjct: 291 K 291
>SPEE_ARCFU (O27950) Probable spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 269 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 311 DEYSTKSKGPLKXYNSEFHTASFCLPSFARRVIEA 207 +E + KG YN + H A+F LP + ++ +EA Sbjct: 233 EERFERIKGKTVHYNPDVHRAAFALPEWLKKEVEA 267
>SPEE1_BACCR (Q814Q1) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 275 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+ F + S + P+ IE+ + ++K Y E H A+F LP F Sbjct: 223 YPSGLWTFTIGSKK------HDPLEVIEERFHEIETK----YYTKELHNAAFALPKFVGD 272 Query: 218 VIE 210 +I+ Sbjct: 273 LIK 275
>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)| Length = 909 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -1 Query: 232 HSRGGSSRPRLTNSYEDGD*NQ 167 HSR G++RP+ S++DGD +Q Sbjct: 216 HSRDGAARPKDEGSWQDGDSSQ 237
>PI5KA_ARATH (Q9LMN1) Phosphatidylinositol-4-phosphate 5-kinase 10 (EC 2.7.1.68)| (AtPIP5K10) (1-phosphatidylinositol-4-phosphate kinase 10) (PtdIns(4)P-5-kinase 10) (Diphosphoinositide kinase 10) Length = 427 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +1 Query: 85 KKGGLSLCLR*DRFL----PVSETKAVLLVGPGFSHHLHK 192 K G + L + DRFL SE K +L + PG+ H+HK Sbjct: 78 KVGNMFLLSKDDRFLIKILRKSEIKVILEMLPGYFRHIHK 117
>SPEE1_BACAN (Q81JT0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 275 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -3 Query: 398 YPSGVIGFMLCSTEGPSVDFQHPVFSIEDDEYSTKSKGPLKXYNSEFHTASFCLPSFARR 219 YPSG+ F + S + ++ F + +Y TK E H A+F LP F Sbjct: 223 YPSGLWTFTIGSKKHDPLEVSEERFHEIETKYYTK----------ELHNAAFALPKFVGD 272 Query: 218 VIE 210 +I+ Sbjct: 273 LIK 275
>EI2BG_HUMAN (Q9NR50) Translation initiation factor eIF-2B gamma subunit (eIF-2B| GDP-GTP exchange factor) Length = 452 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -2 Query: 270 QLRVPHCIVLFAIIREEGHRGQG*LILMKMVTETRAD*KNC 148 ++ + +C+++ ++ EEG QG +I V E AD K+C Sbjct: 384 RVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEKGADIKDC 424
>CISY_RICAF (Q59732) Citrate synthase (EC 2.3.3.1) (Fragment)| Length = 411 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 Query: 286 PLDFVEYSSSSMLXTGCWKSTLGPSVEQSMKPI 384 PLDF E M T C K T+ P ++ ++ I Sbjct: 189 PLDFTENFLHMMFATPCTKYTVNPIIKNALNKI 221
>CISY_ASTRI (Q59136) Citrate synthase (EC 2.3.3.1) (Fragment)| Length = 411 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 Query: 286 PLDFVEYSSSSMLXTGCWKSTLGPSVEQSMKPI 384 PLDF E M T C K T+ P ++ ++ I Sbjct: 189 PLDFTENFLHMMFATPCTKYTVNPIIKNALNKI 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,760,247 Number of Sequences: 219361 Number of extensions: 994988 Number of successful extensions: 1796 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1779 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
