>RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 538

 Score =  107 bits (266), Expect = 3e-23
 Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
 Frame = -1

Query: 581 LMLDPYGGLMSSISPSETPFPHRRGNLYQIQYYSFWYDNGTAAAEKRMSWVRGLYNEMEP 402
           + L+ +GG MS IS   TPFPHR G    ++Y   W  +      + + W+  +Y  M+P
Sbjct: 387 IALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKP 446

Query: 401 YVSSNPRAVYVNYRDLDLGTNELDGNVTSYHKA----TVWGHKYFKGNFKRLAAVKTMVD 234
           +VS NPR  YVN+ DLDLG  +  GN T  + A      WG  YF  N++RL   KT++D
Sbjct: 447 FVSKNPRLGYVNHIDLDLGGIDW-GNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLID 505

Query: 233 PHDFFRNEQSIPPL 192
           P++ F + QSIPP+
Sbjct: 506 PNNVFNHPQSIPPM 519

>RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 535

 Score =  104 bits (260), Expect = 2e-22
 Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = -1

Query: 581 LMLDPYGGLMSSISPSETPFPHRRGNLYQIQYYSFWYDNGTAAAEKRMSWVRGLYNEMEP 402
           + L+ +GG MS IS   TPFPHR+G     +Y   W  +  +   +   W+   Y+ +EP
Sbjct: 391 IALNGFGGKMSEISTDFTPFPHRKGTKLMFEYIIAWNQDEESKIGEFSEWLAKFYDYLEP 450

Query: 401 YVSSNPRAVYVNYRDLDLG---TNELDGNVTSYHKATVWGHKYFKGNFKRLAAVKTMVDP 231
           +VS  PR  YVN+ DLD+G            +   A  WG +YF  N++RL   KT++DP
Sbjct: 451 FVSKEPRVGYVNHIDLDIGGIDWRNKSSTTNAVEIARNWGERYFSSNYERLVKAKTLIDP 510

Query: 230 HDFFRNEQSIPPL 192
           ++ F + QSIPP+
Sbjct: 511 NNVFNHPQSIPPM 523

>MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-)|
          Length = 447

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = -1

Query: 347 GTNELDGNVTSYHKATVWGHKYFKGNFKRLAAVKTMVDPHDFFRNEQSIPP 195
           GTN     V     A+V    Y   +F RL AVK   DP + FR   +IPP
Sbjct: 393 GTNLNFAGVEDISPASVEA-AYTPADFARLRAVKAQYDPDNMFRVNFNIPP 442

>XYLT1_MOUSE (Q811B1) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 953

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 401 YVSSNPRAVYVNYRDLDLGTNELDGNVTSYHKATVWGHKYFKGNF-KRLAAVKTMVD-PH 228
           Y+  + R+ Y++ + L       +  VTS+  AT+WG   F   + + +  +  M D P 
Sbjct: 351 YIHVDKRSNYLHRQGLQFSRQYENVRVTSWKMATIWGGASFLSTYLQSMRDLLEMTDWPW 410

Query: 227 DFFRN 213
           DFF N
Sbjct: 411 DFFIN 415

>TPIS_LACDL (Q93GB7) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase) (Lactacin B inducer
           protein) (IP)
          Length = 252

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 141 DQMVSPSTIVSIILAAGKRRDALLIPEEIMGIHHGLDSC 257
           DQ+  PS + S+I A     DALL   E   +H G ++C
Sbjct: 29  DQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENC 67

>TPIS_LACDE (O32757) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 252

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 141 DQMVSPSTIVSIILAAGKRRDALLIPEEIMGIHHGLDSC 257
           DQ+  PS + S+I A     DALL   E   +H G ++C
Sbjct: 29  DQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENC 67

>CYAA_SACKL (P23466) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
            (Adenylyl cyclase)
          Length = 1839

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -1

Query: 356  LDLGTNELDGNVTSYHKATVWGH----KYFKGNFKRLAAVKTMVDP 231
            LD+G+N+L  N+++YH    W +    KY   +  +   +K+ +DP
Sbjct: 1078 LDVGSNQLKYNISNYHYDWNWRNNKDLKYLNFSGNKRFEIKSALDP 1123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,371,290
Number of Sequences: 219361
Number of extensions: 1913703
Number of successful extensions: 4947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4942
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)