Clone Name | rbasd11b07 |
---|---|
Clone Library Name | barley_pub |
>MINE_SYNY3 (Q55899) Putative cell division topological specificity factor| Length = 97 Score = 43.1 bits (100), Expect = 5e-04 Identities = 24/77 (31%), Positives = 47/77 (61%) Frame = -2 Query: 482 AKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSV 303 A++RLK+++ +DR +S E +++ +VE +S +VEI+ + ++ + +D + T Sbjct: 21 ARRRLKLVIANDRSGLSPEMMEEMRREIVEVVSRYVEIDPGE-MEFSLESDQRM-TALIA 78 Query: 302 TVPVRRVKPEYQESEEQ 252 +PVRRV+ +SE Q Sbjct: 79 NLPVRRVRRTKAKSEAQ 95
>MINE_GUITH (O78435) Putative cell division topological specificity factor| Length = 88 Score = 40.0 bits (92), Expect = 0.004 Identities = 20/66 (30%), Positives = 43/66 (65%) Frame = -2 Query: 479 KQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSVT 300 K+RLK++L DR ++ +K+ E ++ +S++VE+++ D+++ I TD+ + T Sbjct: 21 KRRLKLVLAHDRSTLNASTLEKMREEILLVVSKYVELDT-DSLEFSIRTDSKM-TALIAN 78 Query: 299 VPVRRV 282 +P+RR+ Sbjct: 79 LPIRRI 84
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 35.0 bits (79), Expect = 0.13 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +1 Query: 190 STLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEY-TVPRPASVEISTCTLSRD 366 ST + +++ + TI+ SS + + + TGT T+ T+P PAS S T++ Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFSTITNT 205 Query: 367 SISTNSDSASTTLSTIFFFASS 432 S+ +S S +TT + ++ SS Sbjct: 206 SMIPSSSSFTTTTGSPYYNTSS 227
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 34.3 bits (77), Expect = 0.22 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = +1 Query: 187 TSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRD 366 ++T P S ++ +PT P ++ S T T T T P P+ +T Sbjct: 1421 SATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPTTSTTSPTPSPTTSTTSPTPSP 1480 Query: 367 SISTNSDSASTTLSTIFFFASSLTS 441 + ST S + S T ST S +TS Sbjct: 1481 TTSTTSPTPSPTTSTTSPTTSPITS 1505
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 33.9 bits (76), Expect = 0.28 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Frame = +1 Query: 205 DSPVSLKSTPTIFPPYCSSDSWYSGFTRR-----TGTVTEYTVPRPASVEISTCTLSRDS 369 DS S +T T F P S +S+ F+RR + + T T + ++ + S S Sbjct: 284 DSAYSSSTTSTSFKPRRSENSYQDAFSRRHFSASSASTTASTAIAATTAATASSSASSSS 343 Query: 370 ISTNSDSASTTLSTIF 417 +S++S S+S++ S+ F Sbjct: 344 LSSSSSSSSSSSSSQF 359
>ZN193_HUMAN (O15535) Zinc finger protein 193 (PRD51) (Zinc finger and SCAN| domain-containing protein 9) Length = 394 Score = 33.5 bits (75), Expect = 0.37 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = +3 Query: 54 LDIYIRSGNSSILPEESQGAIKEHNRAH*AKESVVLIRDIEIECD 188 LD+ + SILP+E QG ++EH +E+V+L+ D+E E D Sbjct: 92 LDLLVLEQFLSILPKELQGWVREHCPES-GEEAVILLEDLERELD 135
>MCR_RAT (P22199) Mineralocorticoid receptor (MR)| Length = 981 Score = 33.1 bits (74), Expect = 0.48 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Frame = +1 Query: 178 SNVTSTLPDDSPVSLKSTPTIFPP-YCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCT 354 SNV S L SP+S +P PP +CS S S +V PA++ S C+ Sbjct: 255 SNVGSPL--SSPLSSMKSPISSPPSHCSVKSPVSS---PNNVPLRSSVSSPANLNNSRCS 309 Query: 355 LSRDSISTNSDS--ASTTLSTIFFFASSLTSHLS 450 +S S +TN+ S +S T ST+ S +++ S Sbjct: 310 VSSPSNNTNNRSTLSSPTASTVGSIGSPISNAFS 343
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 33.1 bits (74), Expect = 0.48 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +1 Query: 190 STLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRDS 369 +TLP + + KST T F P SS W T +TVP + +ST + S Sbjct: 4674 TTLPVLTSTATKSTATSFTPIPSSTLW-----------TTWTVPAQTTTPMSTMSTIHTS 4722 Query: 370 ISTNSDSASTTLST 411 + + ST L+T Sbjct: 4723 STPETTHTSTVLTT 4736
>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor| Length = 1169 Score = 32.7 bits (73), Expect = 0.63 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 12/108 (11%) Frame = +1 Query: 154 WFSFGT*KSNVTSTLPDDSPVSLKSTPT----IFPPYCSSDSWYSG-------FTRRTGT 300 + S T +N TS+ S V + T T PY +S SW S T T Sbjct: 380 YVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSWSSSEVCTECTETESTSY 439 Query: 301 VTEYTVPRPASVEISTCTLSRDSISTN-SDSASTTLSTIFFFASSLTS 441 VT Y A+ ++ S + T +++ ST+ ST + +SS +S Sbjct: 440 VTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSSSS 487 Score = 30.8 bits (68), Expect = 2.4 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 12/108 (11%) Frame = +1 Query: 154 WFSFGT*KSNVTSTLPDDSPVSLKSTPT----IFPPYCSSDSWYSG-------FTRRTGT 300 + S T +N TS+ S V + T T PY +S SW S T T Sbjct: 506 YVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYVTSSSWSSSEVCTECTETESTSY 565 Query: 301 VTEYTVPRPASVEISTCTLSRDSISTN-SDSASTTLSTIFFFASSLTS 441 VT Y A+ ++ S + T +++ ST+ ST + +S+ T+ Sbjct: 566 VTPYVSSSTAAANYTSSFSSSSEVCTECTETESTSTSTPYATSSTGTA 613
>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Agglutinin-like| adhesin) Length = 1419 Score = 32.7 bits (73), Expect = 0.63 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%) Frame = +1 Query: 190 STLPDDSPVSLKSTPTIFPPYCSSDSWYSG------FTRRTGTVTEYTVPRPASV---EI 342 +T+ D+ P + STP+ SSD+ T +T T+ T SV E Sbjct: 1131 TTIEDNEPNTFTSTPSSHSEIFSSDNSVLSKQVDRESTIKTSPTTDVTTVSSLSVHSTEA 1190 Query: 343 STCTLSRDSISTNSDSASTTLSTIFFFASSLTSHLSEN 456 ST TL +S S N S + ++T SS ++H +E+ Sbjct: 1191 STATLGENSFS-NVASTPSNIATSLRSTSSSSNHATES 1227
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 32.0 bits (71), Expect = 1.1 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Frame = +1 Query: 205 DSPVSLKSTPTIFPPYCSSD---SWYSGFTRRTGTVTEYTVPRPASVEISTCTLSRDSIS 375 +S S + + T + P +S + S TRRT T + + +V ++ T S S + Sbjct: 140 ESSSSKEGSSTSYMPSTTSSLSSAQISSTTRRTSTDMKSSEMIATTVSTTSTTSSSTSST 199 Query: 376 TNSDSASTTLSTIFFFASSLTS 441 T+S ++STT ST SS TS Sbjct: 200 TSSTTSSTTSSTTSSTTSSSTS 221
>ATPF_RICCN (Q92JP3) ATP synthase B chain (EC 3.6.3.14)| Length = 164 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -2 Query: 518 APTIHENTNASIAKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQV 345 A + ++TNA I K L S E S+E KKI++ + + EF+E + D +Q+ Sbjct: 54 AALLFKHTNAQIKKLET---LRSQMIEDSNEVTKKIIQEKTKEIEEFLEHKKSDAIQL 108
>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor| (Fibrocystin) (Polyductin) (Tigmin) Length = 4074 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = -2 Query: 485 IAKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYS 306 I KQ +++L D + +K + VV S FV++ S N + ST + T YS Sbjct: 3404 ICKQTDQVVLILDSADAIWAIQK--LYPVVSVTSGFVDVFSSVNANIPCSTSGSVSTFYS 3461 Query: 305 VTVPVRRV 282 + +P+R++ Sbjct: 3462 I-LPIRQI 3468
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 31.6 bits (70), Expect = 1.4 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 13/87 (14%) Frame = +1 Query: 190 STLPDDSPVSLKSTPTIF-------PPYCSSD------SWYSGFTRRTGTVTEYTVPRPA 330 +T+P +P + +T T PP C+ + TRRT T T T RP Sbjct: 38 TTVPTCAPTTTTTTTTTCAPPTRPPPPPCTDAPTTTKRTTEKSTTRRTTTTTRQTTTRPT 97 Query: 331 SVEISTCTLSRDSISTNSDSASTTLST 411 + +T T R + + + +TT +T Sbjct: 98 TTTTTTTTTRRPTTRSTTTRHTTTTTT 124
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 31.2 bits (69), Expect = 1.8 Identities = 22/90 (24%), Positives = 42/90 (46%) Frame = -2 Query: 428 EAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSVTVPVRRVKPEYQESEEQY 249 E +K I + E S + +++ V I G G +P+R ++ E +E EE+ Sbjct: 7088 EKRKLIPQDKGETPSHSKKEKTQHPVATPILASPG-GDQQQQKIPMRMIRGERREIEEEI 7146 Query: 248 GGKIVGVDFKDTGESSGNVDVTFDFYVPNE 159 +I+ D + G +G++ DF +P + Sbjct: 7147 ANRILS-DISEEGSIAGSLASLEDFEIPKD 7175
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/78 (34%), Positives = 36/78 (46%) Frame = +1 Query: 178 SNVTSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTL 357 + VTST+ + V ST T+ +S S S T T T +T S ST T Sbjct: 284 TTVTSTVTSTTTVPT-STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTS-STSTT 341 Query: 358 SRDSISTNSDSASTTLST 411 + S + S +STTLST Sbjct: 342 QQSSSTITSSPSSTTLST 359
>MCR_MOUSE (Q8VII8) Mineralocorticoid receptor (MR)| Length = 978 Score = 30.8 bits (68), Expect = 2.4 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Frame = +1 Query: 178 SNVTSTLPDDSPVSLKSTPTIFPP-YCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCT 354 SNV S L SP+S +P PP +CS S S +V PA++ S C+ Sbjct: 255 SNVGSPL--SSPLSSMKSPISSPPSHCSVKSPVSS---PNNVPLRSSVSSPANLNNSRCS 309 Query: 355 LSRDSISTN-SDSASTTLSTIFFFASSLTSHLS 450 +S S + N S +S T ST+ S +++ S Sbjct: 310 VSSPSNTNNRSTLSSPTASTVGSIGSPISNAFS 342
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/91 (25%), Positives = 45/91 (49%) Frame = +1 Query: 178 SNVTSTLPDDSPVSLKSTPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPASVEISTCTL 357 SNVT+T+ + ++ TI P +S SGF TV+ T + ++ T + Sbjct: 845 SNVTATITGNVTITTGDLTTIDPTTFTSTYLSSGFQ----TVSNTTATSGSDDDVKTAST 900 Query: 358 SRDSISTNSDSASTTLSTIFFFASSLTSHLS 450 S + T+S S+S++ ++ +S++ L+ Sbjct: 901 SSSTSYTSSSSSSSSTTSAASSKASVSMGLN 931
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 30.4 bits (67), Expect = 3.1 Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 16/122 (13%) Frame = +2 Query: 104 PRGDKGTQQSALGQGISGSHSGHRNRM*HQHYQTILQCP*SQHQRFFLRTALQIPGTRAS 283 P+ + QQ Q + H+ QH+Q + QHQ + Q + Sbjct: 147 PQHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQH 206 Query: 284 HGALEQLQ-----------NTQCQGQHRSRYPLVHYH-----AIQSRQIQIAPQQRFPLS 415 H +Q Q ++Q Q QH+ H H Q QIQ+ PQQ LS Sbjct: 207 HQQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQHQHNQQQHQQQQNQIQMVPQQPQSLS 266 Query: 416 FS 421 S Sbjct: 267 NS 268
>ZN192_HUMAN (Q15776) Zinc finger protein 192 (LD5-1)| Length = 578 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +3 Query: 54 LDIYIRSGNSSILPEESQGAIKEHNRAH*AKESVVLIRDIEIECDI 191 L++ + +ILPEE Q +K+H + +E V L+ D+E + DI Sbjct: 91 LELLVLEQFLTILPEELQTLVKDHQLEN-GEEVVTLLEDLERQIDI 135
>YOJN_ECOLI (P39838) Sensor-like histidine kinase yojN (EC 2.7.13.3)| (Phosphotransfer intermediate yojN) Length = 890 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 347 VDISTDAGLGTVYSVTVPVRRVKPEYQESEEQ 252 ++I T GLGT YSV + + PE +E EE+ Sbjct: 658 LNIKTRDGLGTRYSVHIKMLAADPEVEEEEER 689
>ZN397_HUMAN (Q8NF99) Zinc finger protein 397 (Zinc finger and SCAN| domain-containing protein 15) Length = 534 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = +3 Query: 54 LDIYIRSGNSSILPEESQGAIKEHNRAH*AKESVVLIRDIEIECD 188 L++ + SILPEE Q +++HN +E+V L+ D+E E D Sbjct: 90 LELLVLEQFLSILPEELQIWVQQHNPES-GEEAVTLLEDLEREFD 133
>ZBT17_HUMAN (Q13105) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Myc-interacting zinc finger protein) (Miz-1 protein) Length = 803 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = -2 Query: 476 QRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVE---IESRDNVQVDISTDAGLGTV 312 Q+ ++ L D V D K ++V+ A SE+ + ++ +D V +DIS AGLG V Sbjct: 16 QQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQV 73
>ZBT17_MOUSE (Q60821) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Zinc finger protein 100) (Zfp-100) (Polyomavirus late initiator promoter-binding protein) (LP-1) (Zinc finger protein Z13) Length = 794 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = -2 Query: 476 QRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVE---IESRDNVQVDISTDAGLGTV 312 Q+ ++ L D V D K ++V+ A SE+ + ++ +D V +DIS AGLG V Sbjct: 16 QQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQV 73
>CG031_MOUSE (Q9D5Y0) Protein C7orf31 homolog (Protein TISP74)| Length = 588 Score = 24.6 bits (52), Expect(2) = 6.7 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 36 TE*KKSLDIYIRSGNSSILPEESQGAIKE 122 T+ KKS D+Y GN S+LP+ A+KE Sbjct: 115 TQNKKS-DVY---GNDSLLPKPPNSAVKE 139 Score = 23.1 bits (48), Expect(2) = 6.7 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = +1 Query: 226 STPTIFPPYCSSDSWYSGFTRRTGTVTEYTVPRPA 330 S ++FP + S Y+G RT TVP A Sbjct: 155 SRGSVFPTFTSPKDLYTGIKARTQQPFPPTVPTKA 189
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +1 Query: 283 TRRTGTVTEYTVPR-PASVEISTCTLSRDSISTNSDSASTTLST 411 TR T T T + P S IST + S ++ +++ DS STT+ST Sbjct: 440 TRSASTETVTTRSQEPPSTTISTWSASTETSTSSQDSPSTTIST 483
>O16G_BACSU (O06994) Oligo-1,6-glucosidase (EC 3.2.1.10) (Oligosaccharide| alpha-1,6-glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D-glucanohydrolase) Length = 561 Score = 29.3 bits (64), Expect = 7.0 Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = -2 Query: 515 PTIHENTNASIAKQRLKMILFSDRCEVSDEAKKKIVESVVEALSEFVE---IESRDNVQV 345 P I++ + + + ++ D E+ + ++ +VE+ + EFV+ I+ RD+ + Sbjct: 365 PFIYQGEEIGMVNSDMPLEMYDD-LEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHART 423 Query: 344 DISTDAGLGTVYSVTVPVRRVKPEYQE 264 + DAG ++ P V YQ+ Sbjct: 424 PMQWDAGKHAGFTAGDPWIPVNSRYQD 450
>RNF31_MOUSE (Q924T7) RING finger protein 31| Length = 1066 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 11/34 (32%) Frame = -1 Query: 330 CWPWHC-----------VFCNCSSAPCEARVPGI 262 C PWHC VFC S P +VPGI Sbjct: 297 CLPWHCLTCATLNEPWAVFCAVCSQPKGCKVPGI 330
>BIG1_BOVIN (O46382) Brefeldin A-inhibited guanine nucleotide-exchange protein| 1 (Brefeldin A-inhibited GEP 1) (p200 ARF-GEP1) (p200 ARF guanine nucleotide exchange factor) Length = 1849 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Frame = -2 Query: 461 ILFSDRCEVSDEAKKKIVESVVEALSEFVEIESRDNVQVDISTDAGLGTVYSVT------ 300 IL+ +E + IV+S+VE + V ++ + +++S D GT+ + Sbjct: 312 ILYDGENHDCEEKPQDIVQSIVEEMVNIVVGDTGERTTINVSADGNNGTIEDGSDSENIQ 371 Query: 299 ---VPVRRVKPEYQESEEQYGGKIVGVDFKDTGESSG 198 +P + Y S + D +++G SSG Sbjct: 372 ANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSG 408
>ZFP38_HUMAN (Q9Y5A6) Zinc finger protein 38 homolog (Zfp-38) (Zinc finger and| SCAN domain-containing protein 21) (NY-REN-21 antigen) Length = 473 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +3 Query: 54 LDIYIRSGNSSILPEESQGAIKEHNRAH*AKESVVLIRDIEIECD 188 L++ + +ILP+E Q ++EH A+E+V L+ D+E E D Sbjct: 85 LELLVLEQFLTILPQELQAWVQEHCPES-AEEAVTLLEDLERELD 128
>SYI_METMP (Q6LX78) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1034 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = -2 Query: 284 VKPEYQESEEQYGGKIVGVDFKDTGESSGNVDVTFDFYVPNENH*FLGLVRSVV 123 +KPEY E + IVGV+F S GNV + + N+ GLVR VV Sbjct: 914 IKPEYVEFRVEIPENIVGVEF-----SKGNVYINIEM---NDEVIKEGLVREVV 959
>SYCP2_HUMAN (Q9BX26) Synaptonemal complex protein 2 (SCP-2) (Synaptonemal| complex lateral element protein) (hsSCP2) Length = 1530 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = -2 Query: 440 EVSDEAKKKIVESVVEALSEFVEIESRDNV 351 +VSDE KK++VES V + V I+SR N+ Sbjct: 138 DVSDEGKKQVVESFVPRICSLV-IDSRVNI 166
>MUC13_HUMAN (Q9H3R2) Mucin-13 precursor (Down-regulated in colon cancer 1)| Length = 512 Score = 28.9 bits (63), Expect = 9.1 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Frame = +1 Query: 226 STPTIFPPYCSSDSWYSGFTRRTG-------TVTEYTVPRPASVEISTCTLSRDSISTNS 384 +T T FP S+ + F T T + T+P PA IST + S I T + Sbjct: 45 TTETNFPETASTTANTPSFPTATSPAPPIISTHSSSTIPTPAPPIISTHSSSTIPIPTAA 104 Query: 385 DSASTT 402 DS STT Sbjct: 105 DSESTT 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,180,724 Number of Sequences: 219361 Number of extensions: 1532628 Number of successful extensions: 5058 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5052 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)