ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11b06 |
|---|---|
| Clone Library Name | barley_pub |
>GMIP_MOUSE (Q6PGG2) GEM-interacting protein (GMIP)| Length = 971 Score = 37.4 bits (85), Expect = 0.044 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 1/95 (1%) Frame = -1 Query: 520 QDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQA 341 QD + P P + +P+P PWE S G+ PG V S S++ Sbjct: 382 QDTKKKFSGPLPPRLEEEGSPEPGPWEVASLGSQGI--------PGSDVDSVGGGSESRS 433 Query: 340 TGS-NNSPGHGDLMLTAEPATGSEARVDDVDASPE 239 S +SPG G L +TG+E+ D + P+ Sbjct: 434 LDSPTSSPGAGARRLVKASSTGTESSDDFEERDPD 468
>NOL3_RAT (Q62881) Nucleolar protein 3| Length = 221 Score = 37.0 bits (84), Expect = 0.057 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPK 455 E G D E V P P+ P+ E +G+ PD Q++ EP +P +P P+ Sbjct: 135 EIGGPEDSEAVQPRTPEEPELEAEAT----KGDEPDLEQEMEPEPEPEVEPEPEPEPEPE 190 Query: 454 PKP 446 P+P Sbjct: 191 PEP 193
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 36.6 bits (83), Expect = 0.075 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 5/119 (4%) Frame = -1 Query: 535 RPDDIQDINDEPPNPDQPIS-KPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRT 359 + +D +PP PDQP+ P PK W K+ + T P ++ G + Sbjct: 453 KEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSNPPARSQSSDTEQPSPTSGGGKV 512 Query: 358 NSTS-QATGSNNSPGHG-DLMLTAEPATGSEARVDDVDASPEQ*LWKRIDEQ--QRDQD 194 + G + G+ D++ + GS +R S + WK +D + ++DQD Sbjct: 513 AAVQPPEEGPSRKDGNKVDVVGATQGQAGSCSRGPGDGGSRDH--WKDLDRKDGKKDQD 569
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 36.6 bits (83), Expect = 0.075 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 8/122 (6%) Frame = -1 Query: 535 RPDDIQDINDEPPNPDQPIS-KPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRT 359 + +D +PP PDQP+ P PK W K +SS ++ +SD + + Sbjct: 453 KEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVK---RSSNPPARSQSSDTEQQSPTSGG 509 Query: 358 NSTSQATGSNNSPGHGDL-----MLTAEPATGSEARVDDVDASPEQ*LWKRIDEQ--QRD 200 + A S PG D M + TG+ +R + + WK D + ++D Sbjct: 510 GKVAPAQPSEEGPGRKDENKVDGMNAPKGQTGNSSRGPGDGGNRDH--WKESDRKDGKKD 567 Query: 199 QD 194 QD Sbjct: 568 QD 569
>CSPG3_HUMAN (O14594) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1321 Score = 35.8 bits (81), Expect = 0.13 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Frame = -1 Query: 613 PETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPD---QPISKPRMAPKPKPW 443 P V P + H ++ V+E+ ++ E P + P PD P+ AP P PW Sbjct: 569 PTMVPPSISGHSRA--PVLEL-EKAEGP------SARPATPDLFWSPLEATVSAPSPAPW 619 Query: 442 EK-QGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPATGSEAR 266 E S L + A P E + + T +T +N HG+ TA P+ +E + Sbjct: 620 EAFPVATSPDLPMMAMLRGPKE---WMLPHPTPISTEANRVEAHGEATATAPPSPAAETK 676 Query: 265 V 263 V Sbjct: 677 V 677
>TONB_NEIMB (P57004) Protein tonB| Length = 280 Score = 35.4 bits (80), Expect = 0.17 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Frame = -1 Query: 619 PDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWE 440 P PE PV P P V++ + + DIQ +EP ++P + + P+PKP Sbjct: 69 PVPEPPKPVEPPKP-----VLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPKPEA 123 Query: 439 KQGQQSSGLDLKAHTSDPGESTSGVRTNSTS-QATGSNNSPG 317 K + + ++ + P E + S Q G + G Sbjct: 124 KPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGEDKGTG 165
>TONB_NEIMA (P57003) Protein tonB| Length = 280 Score = 35.4 bits (80), Expect = 0.17 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Frame = -1 Query: 619 PDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWE 440 P PE PV P P V++ + + DIQ +EP ++P + + P+PKP Sbjct: 69 PVPEPPKPVEPPKP-----VLKPVVTKKADADIQQPKEEPKPEEKPKPEEKPKPEPKPEA 123 Query: 439 KQGQQSSGLDLKAHTSDPGESTSGVRTNSTS-QATGSNNSPG 317 K + + ++ + P E + S Q G + G Sbjct: 124 KPVPKPAEKPVEKPSEKPAEHPGNASAKADSEQGNGEDKGTG 165
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein phosphatase| (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 35.4 bits (80), Expect = 0.17 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -1 Query: 619 PDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKP 446 PDP+ + P+ + E+M+ Q ++ Q + PP P QP +P+ P+P+P Sbjct: 1614 PDPDDQFIIPPELEEEVKEIMKHHQEQQQQQQQQQL-PPPPQPPQPQPQPQPQPQPQP 1670
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) Length = 1217 Score = 35.4 bits (80), Expect = 0.17 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPD-DIQDINDEPPNPDQPISKPRMAP 458 +SQ D + T PQ S +E + +Q + D D + ++PP+P P S P+ P Sbjct: 386 QSQKQYDTPSKTHPNPQQGTSMLE--DDLQLSDSEDSDTEQATEKPPSPPAPPSAPQTLP 443 Query: 457 KPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTA---EP 287 +P SSG S+ ES S + S S ++ S + L A EP Sbjct: 444 EP---VASAHSSSG------ESESSESDSSSDSESESSSSDSEEEEENEPLETRAPEPEP 494 Query: 286 ATGSEARVDD 257 T ++ ++D+ Sbjct: 495 PTTNKWQLDN 504
>NOL3_MOUSE (Q9D1X0) Nucleolar protein 3| Length = 220 Score = 35.0 bits (79), Expect = 0.22 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 634 ESQGSPD-PETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAP 458 E G P+ E + P P+ P+ E E G+ PD Q++N E +P +P P Sbjct: 134 EEVGGPEGSEALQPRTPEEPELEAEATE----GDEPDLEQEMNPEQEPEPEPEPEPEPEP 189 Query: 457 KPKP 446 +P+P Sbjct: 190 EPEP 193
>104K_THEAN (Q4U9M9) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 893 Score = 34.3 bits (77), Expect = 0.37 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Frame = -1 Query: 625 GSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKP-- 452 G P E + P +++ ++ + +DI EP P +P S + +PKP Sbjct: 704 GEPTAEQPDDIEPIEESVFIKETGILTEEVKTEDIHSETGEPEEPKRPDSPTKHSPKPTG 763 Query: 451 --KPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPA-T 281 K+ ++S GL L T+D + + T + S DL E Sbjct: 764 THPSMPKKRRRSDGLALS--TTDLESEAGRILRDPTGKIVTMKRSKSFDDLTTVREKEHM 821 Query: 280 GSEAR---VDD 257 G+E R VDD Sbjct: 822 GAEIRKIVVDD 832
>DSL1_CHICK (P34822) Dorsalin-1 precursor (DSL-1)| Length = 427 Score = 33.9 bits (76), Expect = 0.48 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +2 Query: 8 CFLNIRDNVSTSK-----VLISSNNPIPASKGCRCPPKLNQFLIILGDTA 142 CF + DNV+ +K L+ NP ASK C P KL+ I+ D A Sbjct: 358 CFFPLTDNVTPTKHAIVQTLVHLQNPKKASKACCVPTKLDAISILYKDDA 407
>NDX5_CAEEL (O62255) Putative nudix hydrolase 5 (EC 3.6.1.-) (mRNA decapping| enzyme 2 homolog) Length = 367 Score = 33.9 bits (76), Expect = 0.48 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = -3 Query: 452 QAVGEARPTKFRPGPESSHKRPWRIDIGSSNQQHQPGHGIKQQPRSRGLDADGRASYRLR 273 +AV +A + PGPE K+P R +G+ QQ I Q R R + +S Sbjct: 94 KAVAQAPASAPAPGPEEKKKQPKRASVGARMQQQAENARISQTKRPRQVSTSKGSSRNTT 153 Query: 272 SP 267 +P Sbjct: 154 AP 155
>CSPG3_PANTR (Q5IS41) Neurocan core protein precursor (Chondroitin sulfate| proteoglycan 3) Length = 1321 Score = 33.9 bits (76), Expect = 0.48 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 4/121 (3%) Frame = -1 Query: 613 PETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPD---QPISKPRMAPKPKPW 443 P V P + H ++ V+E+ ++ E P + P PD P+ AP P PW Sbjct: 569 PTMVPPSISGHSRA--PVLEL-EKAEGP------SARPATPDLFWSPLEATVSAPSPAPW 619 Query: 442 EK-QGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPATGSEAR 266 E S L + A P E + + T +T +N HG+ T P+ +E + Sbjct: 620 EAFPVATSPDLPMMAMLRGPKE---WMLPHPTPISTEANRVEAHGEATTTPPPSPAAETK 676 Query: 265 V 263 V Sbjct: 677 V 677
>R3HD2_HUMAN (Q9Y2K5) R3H domain-containing protein 2 (Fragment)| Length = 962 Score = 33.9 bits (76), Expect = 0.48 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Frame = -1 Query: 598 PVVPQHPK----SYMEVMEMIQRGERPDDIQDINDEPPNPDQ----PISKPRMAPKPKPW 443 P PQ+P S+ + M QRG++P D+ + P Q P++ P +P P P Sbjct: 702 PQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPV 761 Query: 442 EKQGQQSSGL 413 +GL Sbjct: 762 TSLSSVCTGL 771
>TONB_SALTY (P25945) Protein tonB| Length = 242 Score = 33.5 bits (75), Expect = 0.63 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Frame = -1 Query: 613 PETVTPVVP---QHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPW 443 P TVT V P + P++ E + E + + I + P I KP+ PKPKP Sbjct: 44 PITVTMVSPADLEPPQAVQPPPEPVVEPEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPK 103 Query: 442 E---KQGQQSSGLDLK---AHTSDPGESTSGVR-TNSTSQAT 338 K+ ++ ++K + P E+++ VR T+ST+ AT Sbjct: 104 PKPVKKVEEQPKREVKPAAPRPASPFENSAPVRPTSSTASAT 145
>SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein| B) (S-layer protein 1) Length = 1664 Score = 33.5 bits (75), Expect = 0.63 Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 1/109 (0%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPK 455 E S +P P + E E + P D +DEP D+P P Sbjct: 1296 EPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPS 1355 Query: 454 PKPWEKQGQQSSGLDLKAHT-SDPGESTSGVRTNSTSQATGSNNSPGHG 311 +P S + T +P +T+ T ST+ +GS S G G Sbjct: 1356 DEPTPSDEPTPSDEPTPSETPEEPTPTTTPTPTPSTTPTSGSGGSGGSG 1404
>NCOR1_RAT (Q9WUB5) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Fragment)| Length = 533 Score = 33.5 bits (75), Expect = 0.63 Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 21/138 (15%) Frame = -1 Query: 631 SQGSPDPETVTPVVPQH-PKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPK 455 S+ SP+ ++ T + P+ P+ E + RG RP + + P P +PIS P+ Sbjct: 193 SRYSPESQSQTVLHPRPGPRVSPENLVDKSRGSRPGKSPERSHIPSEPYEPISPPQ---G 249 Query: 454 PKPWEKQGQ----QSSGLDLKAHTSD---PG------------ESTSGVRTNSTSQATGS 332 P EKQ G+D SD PG ESTS + + + Sbjct: 250 PAVHEKQDSMLLLSQRGMDPAEQRSDSRSPGSISYLPYFFTKLESTSPMVKSKKQEIFRK 309 Query: 331 NNSPGHGDL-MLTAEPAT 281 NS G GD M A+P T Sbjct: 310 LNSSGGGDSDMAAAQPGT 327
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 33.1 bits (74), Expect = 0.83 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEKQGQQS--SGLDLKAHTSDPGESTSGVRTNSTSQATGSN 329 PP P P + AP+P P G S +D ++ + P E+ S T S+ A G Sbjct: 1647 PPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGG 1706 Query: 328 NSPGHG 311 ++ G G Sbjct: 1707 SAGGGG 1712
>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 704 Score = 33.1 bits (74), Expect = 0.83 Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 19/152 (12%) Frame = -1 Query: 634 ESQGSPDPETVTP---VVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPD-----QPI 479 ES S + E TP VV + P V + + D DE P P+ Sbjct: 338 ESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPL 397 Query: 478 SKPRMAPKP-------KPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSN--- 329 SKP + PKP P + G KA +S E +S +T ++ + Sbjct: 398 SKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTPKAR 457 Query: 328 -NSPGHGDLMLTAEPATGSEARVDDVDASPEQ 236 + L P G ++ D +S E+ Sbjct: 458 VTAKAAPSLPAKQAPRAGGDSSSDSESSSSEE 489
>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid X| receptor-interacting protein 13) (RIP13) Length = 2453 Score = 33.1 bits (74), Expect = 0.83 Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 21/138 (15%) Frame = -1 Query: 631 SQGSPDPETVTPVVPQH-PKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPK 455 S+ SP+ ++ T + P+ P+ E + RG RP + + P P +PIS P+ Sbjct: 2113 SRYSPESQSQTVLHPRPGPRVSPENLVDKSRGSRPGKSPERSHIPSEPYEPISPPQ---G 2169 Query: 454 PKPWEKQGQ----QSSGLDLKAHTSD---PG------------ESTSGVRTNSTSQATGS 332 P EKQ G+D SD PG ESTS + + + Sbjct: 2170 PAVHEKQDSMLLLSQRGVDPAEQRSDSRSPGSISYLPSFFTKLESTSPMVKSKKQEIFRK 2229 Query: 331 NNSPGHGDL-MLTAEPAT 281 NS G GD M A+P T Sbjct: 2230 LNSSGGGDSDMAAAQPGT 2247
>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 928 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPGE---STSGVRTNSTSQA 341 D+P P+QP + P P+ + SG D + + SD G S SG + S S + Sbjct: 539 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 598 Query: 340 TGSNNSPGHGDLMLTAEPATGSEARVDDVDAS 245 ++S D ++ A+ S++ D AS Sbjct: 599 ASDSDSASDSDSASDSDSASDSDSASDSDSAS 630
>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 946 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPGE---STSGVRTNSTSQA 341 D+P P+QP + P P+ + SG D + + SD G S SG + S S + Sbjct: 539 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 598 Query: 340 TGSNNSPGHGDLMLTAEPATGSEARVDDVDAS 245 ++S D ++ A+ S++ D AS Sbjct: 599 ASDSDSASDSDSASDSDSASDSDSASDSDSAS 630
>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 935 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPGE---STSGVRTNSTSQA 341 D+P P+QP + P P+ + SG D + + SD G S SG + S S + Sbjct: 540 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 599 Query: 340 TGSNNSPGHGDLMLTAEPATGSEARVDDVDAS 245 ++S D ++ A+ S++ D AS Sbjct: 600 ASDSDSASDSDSASDSDSASDSDSASDSDSAS 631
>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 989 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPGE---STSGVRTNSTSQA 341 D+P P+QP + P P+ + SG D + + SD G S SG + S S + Sbjct: 540 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 599 Query: 340 TGSNNSPGHGDLMLTAEPATGSEARVDDVDAS 245 ++S D ++ A+ S++ D AS Sbjct: 600 ASDSDSASDSDSASDSDSASDSDSASDSDSAS 631
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/76 (25%), Positives = 31/76 (40%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSN 329 D PP PDQP P + P W D+ + P + + T +TS+++ S+ Sbjct: 155 DNPPQPDQPDDNPPIPNIPTDWIPNIPTDWIPDIPEKPTTPATTPNIPATTTTSESSSSS 214 Query: 328 NSPGHGDLMLTAEPAT 281 +S T+ T Sbjct: 215 SSSSSSTTPKTSASTT 230
>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)| (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 Score = 32.3 bits (72), Expect = 1.4 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Frame = -3 Query: 344 GHGIKQQPRSRGLDADGRASY---------RLRSPRGRR*CLAGAVTL-ETHRRTAAGSG 195 GHG+K S GLD G +S ++P+ R +GA L ++ + +G Sbjct: 593 GHGLKGNDESAGLDRRGSSSSSPEHSASSDSTKAPQTPR---SGAAHLCDSQETNCSTAG 649 Query: 194 HDVNQRRPDAGSDSSTTLLYLPGLSET 114 H + P +G+DS T L P LS T Sbjct: 650 H---SKTPPSGADSKTVKLKSPVLSNT 673
>R3HD2_MOUSE (Q80TM6) R3H domain-containing protein 2| Length = 1044 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Frame = -1 Query: 598 PVVPQHPK----SYMEVMEMIQRGERPDDIQDINDEPPNPDQ----PISKPRMAPKPKPW 443 P PQ+P S+ + + QRG++P D+ + P Q P++ P +P P P Sbjct: 784 PQAPQNPSMVQWSHCKYYSVEQRGQKPGDLYSPDGSPQANAQMGSSPVTSPTQSPAPSPV 843 Query: 442 EKQGQQSSGL 413 +GL Sbjct: 844 TSLSNVCTGL 853
>TONB_PSEAE (Q51368) Protein tonB| Length = 342 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 6/111 (5%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPI------SK 473 +++ +P P P P PK + E +P ++ +P +P+ +K Sbjct: 136 KAEPTPQPPAAAPE-PTPPK----IEEPKPEPPKPKPVEKPKPKPKPKPKPVENAIPKAK 190 Query: 472 PRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSP 320 P+ PKPKP + ++S + + P T G T A + P Sbjct: 191 PKPEPKPKPEPEPSTEASSQPSPSSAAPPPAPTVGQSTPGAQTAPSGSQGP 241
>TONB_KLEPN (P45610) Protein tonB| Length = 243 Score = 32.3 bits (72), Expect = 1.4 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 6/128 (4%) Frame = -1 Query: 628 QGSP-DPETVTPVVPQ--HPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAP 458 Q SP P +T V P P V+E + E P+ ++ EPP I KP P Sbjct: 38 QPSPTQPIEITMVAPADLEPPPAQPVVEPVVEPE-PEPEPEVVPEPPKEAVVIHKPEPKP 96 Query: 457 KPKPWEKQGQQSSGLDLKAHTSDPGE--STSGVRTNSTSQA-TGSNNSPGHGDLMLTAEP 287 KPKP K + K E S N+T+ A T + S +TA Sbjct: 97 KPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENNNTAPARTAPSTSTAAAKPTVTAPS 156 Query: 286 ATGSEARV 263 + +RV Sbjct: 157 GPRAISRV 164
>TONB_ENTAE (P46383) Protein tonB| Length = 243 Score = 32.3 bits (72), Expect = 1.4 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 10/115 (8%) Frame = -1 Query: 634 ESQGSPDPETVTPVVP---QHPKSYMEVMEMIQRGERPDDIQDINDEPP-------NPDQ 485 E P +T V P + P++ V+E + E P+ ++ EPP + + Sbjct: 37 EKPSPSQPIEITMVAPADLEPPQAAQPVVEPVVEPE-PEPEPEVVPEPPKEVPVVIHKPE 95 Query: 484 PISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSP 320 P KP+ PKPKP +K + + P E+ + + T + P Sbjct: 96 PKPKPKPKPKPKPEKKVEPKREVKPAEPRPVSPFENNNTAPARTAPSTTAATAKP 150
>XPR6_YARLI (P42781) Dibasic-processing endoprotease precursor (EC 3.4.21.-)| Length = 976 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/83 (21%), Positives = 38/83 (45%) Frame = -1 Query: 547 QRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSG 368 Q+ ++P+D + E D+P KP AP+ KP +++ + + SD +S Sbjct: 781 QKEDKPEDKPEDKPEDTPEDKPEDKPEDAPEDKPSDEKKPEEKPEEKPVDNSDSSSDSSD 840 Query: 367 VRTNSTSQATGSNNSPGHGDLML 299 T+ + ++ +G ++L Sbjct: 841 SHTSWWPDLSSKKSAWLYGAVLL 863
>PAR3L_HUMAN (Q8TEW8) Amyotrophic lateral sclerosis 2 chromosome region candidate| gene 19 protein (Partitioning-defective 3-like protein) (PAR3-L protein) (PAR3-beta) Length = 1205 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = -3 Query: 470 PYGTQAQAVGEARPTKFRPGPESSHKRPWRIDIGSSNQQHQ--PGHGIKQQPRSRGLDAD 297 P T+ + P + P P HK P+R D+ S QHQ P + +P RG D Sbjct: 1127 PRPTELRVADLRYPQHYPPPPAPQHKGPFRQDVPPSPPQHQRMPAYQETGRPGPRGGSPD 1186 Query: 296 GRASYRLRSPR 264 + YR + R Sbjct: 1187 -QYPYRTQDSR 1196
>NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)| Length = 494 Score = 32.3 bits (72), Expect = 1.4 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = -1 Query: 475 KPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPG 317 K + PKP+P K+ +G + ++ ++DPG R T + G PG Sbjct: 418 KKKRLPKPQPQNKE----AGSEAESSSADPGPGRKRKRNRKTDEKAGQGGPPG 466
>FTSK_SHIFL (Q83S00) DNA translocase ftsK| Length = 1342 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Frame = -1 Query: 628 QGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNP------DQPISKPR 467 Q P P+T PV+ P+ Y + + Q + ++ +P P +QP +P Sbjct: 361 QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPY 420 Query: 466 MAPKPK------PWEKQGQQSS 419 AP P+ W+ + QQS+ Sbjct: 421 YAPAPEQPVAGNAWQAEEQQST 442
>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK| Length = 1342 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Frame = -1 Query: 628 QGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNP------DQPISKPR 467 Q P P+T PV+ P+ Y + + Q + ++ +P P +QP +P Sbjct: 361 QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPY 420 Query: 466 MAPKPK------PWEKQGQQSS 419 AP P+ W+ + QQS+ Sbjct: 421 YAPAPEQPVAGNAWQAEEQQST 442
>FTSK_ECOLI (P46889) DNA translocase ftsK| Length = 1329 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Frame = -1 Query: 628 QGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNP------DQPISKPR 467 Q P P+T PV+ P+ Y + + Q + ++ +P P +QP +P Sbjct: 361 QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPY 420 Query: 466 MAPKPK------PWEKQGQQSS 419 AP P+ W+ + QQS+ Sbjct: 421 YAPAPEQPVAGNAWQAEEQQST 442
>WWP1_MOUSE (Q8BZZ3) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-)| (WW domain-containing protein 1) Length = 918 Score = 32.0 bits (71), Expect = 1.8 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 17/96 (17%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEK-------QGQQSSGLDLKAHTSDPGESTSGVRTNSTSQ 344 P +P Q ++P+ AP PKP G+ SS L +TS G T STS Sbjct: 214 PSSPSQVAARPKNAPAPKPVTSAPTSDTVNGESSS--VLADNTSTMGTLLPSEDTTSTSN 271 Query: 343 ATGSNN----------SPGHGDLMLTAEPATGSEAR 266 T + S H + + +A G EAR Sbjct: 272 CTSTTTQEPPVQEPPASSEHSECIPSASAEVGPEAR 307
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 32.0 bits (71), Expect = 1.8 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = -1 Query: 496 NPDQPISKP-RMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSP 320 +PD + P R P+ P + QG Q G L PG S ++S+S ++ + P Sbjct: 442 DPDSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRP 501 Query: 319 G----HGDLMLTAEPATGSEARVDDVDASPEQ 236 G HGD A ++ S A A+P Q Sbjct: 502 GGPTTHGD----APSSSSSLAEAQPPLAAPPQ 529
>HMGN4_HUMAN (O00479) High-mobility group nucleosome-binding domain-containing| protein 4 (Nonhistone chromosomal protein HMG-17-like 3) (Non-histone chromosomal protein) Length = 89 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = -1 Query: 544 RGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGEST 374 +G+ D + DEP +S PKP+P K+ G L + +D G+ Sbjct: 6 KGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKASAKKGEKLPKGRKGKADAGKDG 65 Query: 373 SGVRTNSTSQATGSNNSPGHGD 308 + N + S + G GD Sbjct: 66 NNPAKNRDASTLQSQKAEGTGD 87
>HMGN4_BOVIN (Q2YDK4) High-mobility group nucleosome-binding domain-containing| protein 4 Length = 89 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Frame = -1 Query: 544 RGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL------KAHTSDPG 383 +G+ D + DEP +S PKP+P K+ G L KA S G Sbjct: 6 KGDAKGDKGKVKDEPQRRSARLSAKPALPKPEPRPKKAPAKKGEKLAKGRKGKAEVSKDG 65 Query: 382 ESTSGVRTNSTSQATGSNNSPGHGD 308 + + R ST Q S + G GD Sbjct: 66 NNPAKNRDASTVQ---SQKAEGTGD 87
>PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2| Length = 634 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 17/108 (15%) Frame = -1 Query: 547 QRGERPDDIQDINDEPPNPDQPIS---KPRMAPKPK--PWEKQGQQSSGLD-------LK 404 Q ++ ++ ++ ++ P P P S KPR PKPK P +G + +K Sbjct: 135 QAEDKKENTENHSETPAAPALPPSAPPKPRSKPKPKKSPVPPKGATAGASHKGDEVPPIK 194 Query: 403 AHTSDPGEST-----SGVRTNSTSQATGSNNSPGHGDLMLTAEPATGS 275 +T PG+ N+T +A GS++S +A P+T S Sbjct: 195 KNTKAPGKQAPVPPPKPASRNTTREAAGSSHSKKTTGSKASASPSTSS 242
>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor-binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protei Length = 2004 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = -1 Query: 538 ERPDDIQDINDEPPNPDQPIS---KPRMAPKPKPWEKQGQQ 425 ERP Q PP P QP +P+ AP+P P ++Q QQ Sbjct: 1641 ERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQ 1681
>CMGA_BOVIN (P05059) Chromogranin A precursor (CgA) (Pituitary secretory| protein I) (SP-I) [Contains: Vasostatin-1; Chromostatin; Chromacin; Pancreastatin; WE-14; Catestatin] Length = 449 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 9/117 (7%) Frame = -1 Query: 580 PKSYMEVMEMIQRGERPDDIQDI--NDEPPNPDQPISKPRMAPKPK-------PWEKQGQ 428 PK E + E+ DD +++ +DE + D+P + P + P PK P E++ Sbjct: 117 PKEVTEEVSSKDAAEKRDDFKEVEKSDEDSDGDRPQASPGLGPGPKVEEDNQAPGEEEEA 176 Query: 427 QSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPATGSEARVDD 257 S+ L S P G + S+ G + P + L+AE +E ++ Sbjct: 177 PSNAHPL---ASLPSPKYPGPQAKEDSE--GPSQGPASREKGLSAEQGRQTEREEEE 228
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/111 (25%), Positives = 38/111 (34%), Gaps = 8/111 (7%) Frame = -1 Query: 616 DPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPK---- 449 D E+ P PQ S E + +P +++PP P S+ PKP+ Sbjct: 197 DSESEDPPRPQVSDSESEELP------KPRVSDSESEDPPRPQASDSESEELPKPRVSDS 250 Query: 448 ----PWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGD 308 P + S D H P ES N + N S GH D Sbjct: 251 ESEDPQKGPASDSEAEDASRHKEKP-ESEDSDGENKREDSEVQNESDGHAD 300
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 31.6 bits (70), Expect = 2.4 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQP-ISKPRMAP 458 +S+G P P PK +V E+IQ+ P + E P P KP Sbjct: 198 KSEGMAKPPLQQPSPKPIPKQQGQVKEVIQQDSSPKSVSSQQAEKVKPQAPGTGKP---S 254 Query: 457 KPKPWEKQGQQSSGLDLKAHTSDPGESTSGVR----TNSTSQATGSNNSP 320 + P + QQ+S K PG + + V+ S +Q G+ SP Sbjct: 255 QQSPAQTPAQQAS--PGKPVAQQPGSAKATVQQPGPAKSPAQPAGTGKSP 302
>CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing protein 6| Length = 1037 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = -1 Query: 592 VPQHPKSYMEVMEMIQRGE-RPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSG 416 VP PKS Q + +P + +P P P SKP +P+P + + ++ Sbjct: 963 VPSQPKSSQTKSCQSQPSQTKPSPCKSTQPKPSQPWPPQSKPS---QPRPPQPKSSSTNP 1019 Query: 415 LDLKAHTSDPGESTSG 368 KAH S G+ G Sbjct: 1020 SQAKAHHSKAGQKRGG 1035
>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 1029 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/88 (25%), Positives = 37/88 (42%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSN 329 D+P P+QP + P P+ + SG D + S SG + S S + + Sbjct: 540 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSD----SGSDSNSDSGSDSGSDSTSDSGS 595 Query: 328 NSPGHGDLMLTAEPATGSEARVDDVDAS 245 +S D ++ A+ S++ D AS Sbjct: 596 DSASDSDSASDSDSASDSDSASDSDSAS 623
>TONB_PASMU (Q9ZH79) Protein tonB| Length = 256 Score = 31.6 bits (70), Expect = 2.4 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 3/101 (2%) Frame = -1 Query: 619 PDPETVTPVV-PQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPW 443 P+PE PVV P+ PK +++ D +P P +P KP+ KPK Sbjct: 63 PEPEPAPPVVEPELPK---------------EEVADPTVKPEPPKEP-EKPKEPEKPKEK 106 Query: 442 EKQGQQSSGLDLKAHTSDPGESTSGVRTNST--SQATGSNN 326 K+ + K D +S + +NS+ QAT + N Sbjct: 107 PKEKPKEKPKKPKKEQRDLPKSDRQIDSNSSINQQATTTGN 147
>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) Length = 1692 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 6/85 (7%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDP------GESTSGVRTNSTSQA 341 PP QP P + P P P G S + T++P G + + + ++S Sbjct: 1128 PPPASQPTPSPHLVPSPAPSPGPGPVPS----RPPTAEPPPCLRRGAAAADLLSSSPESQ 1183 Query: 340 TGSNNSPGHGDLMLTAEPATGSEAR 266 G PG G +L +E R Sbjct: 1184 HGGTQPPGGGQPLLQPTKVDAAEGR 1208
>IL4RA_PIG (Q863Z5) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 830 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = -1 Query: 538 ERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVR- 362 E ++++ P P +P P + P+P+ WE+ +QS A G S+SG R Sbjct: 528 EALEEVEPSLPAAPQPSEP--PPTLQPEPETWEQILRQSVLQRRAAPAPASGPSSSGYRE 585 Query: 361 -TNSTSQATGSNNSPGHG 311 ++ Q T + G G Sbjct: 586 FVHAVEQGTQDRRAAGSG 603
>TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF-responsive| element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) (AR1) Length = 1960 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/85 (27%), Positives = 34/85 (40%) Frame = -1 Query: 547 QRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSG 368 ++GE D+ P N + + KP + + W + A T G+ G Sbjct: 1408 RKGEVASDLVS----PANQELHVEKP-LPRSSEEWRGSVDDKVKTETHAETVTAGKEPPG 1462 Query: 367 VRTNSTSQATGSNNSPGHGDLMLTA 293 T++TSQ GSN G L TA Sbjct: 1463 AMTSTTSQKPGSNQGRPDGSLGGTA 1487
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/82 (28%), Positives = 32/82 (39%) Frame = -1 Query: 619 PDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWE 440 P ET P+ P P+ + + G+ + PP P +P APKPKP Sbjct: 3420 PVVETAQPLPPVKPQKATPG-PVAEVGKATVTTVQVQSAPPKPAPVAKQPAPAPKPKPKP 3478 Query: 439 KQGQQSSGLDLKAHTSDPGEST 374 K KA PG++T Sbjct: 3479 KP---------KAERPKPGKTT 3491
>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)| Length = 443 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Frame = -1 Query: 628 QGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQP--ISKPRMAPK 455 Q +P P TP P P S P N P N + ++ P +A + Sbjct: 106 QPAPQPPAPTPAAPPPPSS-----------ASPPQNASNNPTPANAAKSPLLNSPTVAKQ 154 Query: 454 PKPWEKQGQQSSGLDLKAHTSDPGESTSG 368 PW K+ +Q++ K +S GES +G Sbjct: 155 IFPWMKESRQNT--KQKTSSSSSGESCAG 181
>ACHA4_HUMAN (P43681) Neuronal acetylcholine receptor protein, alpha-4 subunit| precursor Length = 627 Score = 31.2 bits (69), Expect = 3.1 Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 14/105 (13%) Frame = -1 Query: 619 PDPETVTPVVPQ----HPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKP 452 P+PE P HP S + + E + +D+ P P QP+ + +P P Sbjct: 386 PEPEGEPPATSGTQSLHPPSPSFCVPLDVPAEPGPSCKSPSDQLP-PQQPLEAEKASPHP 444 Query: 451 KPW---EKQGQQSSGLDLKA------HTSDPGEST-SGVRTNSTS 347 P G Q+ GL KA H S PGE+ GVR S S Sbjct: 445 SPGPCRPPHGTQAPGL-AKARSLSVQHMSSPGEAVEGGVRCRSRS 488
>HMGN2_MOUSE (P09602) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -1 Query: 541 GERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGESTS 371 G+ D + DEP +S PKP+P K+ G + K +D G+ + Sbjct: 7 GDAKGDKTKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDAN 66 Query: 370 GVRTNSTSQATGSNNSPGHGD 308 N ++ + + G GD Sbjct: 67 NPAENGDAKTDQAQKAEGAGD 87
>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPG-ESTSGVRTNSTSQATG 335 D+P P+QP + P P+ + SG D + + SD G +STS ++S S + Sbjct: 540 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 599 Query: 334 SNNSPGHGDLMLTAEPATGSEARVDD 257 +++S D ++ + S++ D+ Sbjct: 600 ASDSDSASDSDSASDSDSASDSDSDN 625
>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -1 Query: 508 DEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT-SDPG-ESTSGVRTNSTSQATG 335 D+P P+QP + P P+ + SG D + + SD G +STS ++S S + Sbjct: 540 DKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDS 599 Query: 334 SNNSPGHGDLMLTAEPATGSEARVDD 257 +++S D ++ + S++ D+ Sbjct: 600 ASDSDSASDSDSASDSDSASDSDSDN 625
>TONB_ECOLI (P02929) Protein tonB| Length = 239 Score = 30.8 bits (68), Expect = 4.1 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Frame = -1 Query: 604 VTPVVPQHPKSYMEVMEMIQRGE-RPDDIQDINDEPPNP-DQPISKPRMAPKPKPWEKQG 431 VTP + P++ E + E P+ I + E P ++P KP+ PKPKP +K Sbjct: 50 VTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPK--PKPKPVKKVQ 107 Query: 430 QQSSG--LDLKAHTSDPGESTSGVRTNSTSQATGSNNSP 320 +Q +++ + P E+T+ R S S AT + + P Sbjct: 108 EQPKRDVKPVESRPASPFENTAPARLTS-STATAATSKP 145
>GMIP_HUMAN (Q9P107) GEM-interacting protein (GMIP)| Length = 970 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 7/102 (6%) Frame = -1 Query: 523 IQDINDEPPNPDQPISKP------RMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVR 362 + +N P + + +S P + +P PWE G T PG V Sbjct: 370 LPSLNSSPLDIRKKLSGPLPPRLDENSAEPGPWEDPGTGWRWQGTPGPT--PGSDVDSVG 427 Query: 361 TNSTSQATGS-NNSPGHGDLMLTAEPATGSEARVDDVDASPE 239 S S++ S +SPG G L +TG+E+ D + P+ Sbjct: 428 GGSESRSLDSPTSSPGAGTRQLVKASSTGTESSDDFEERDPD 469
>UBQL1_HUMAN (Q9UMX0) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) (hPLIC-1) Length = 589 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/83 (25%), Positives = 30/83 (36%) Frame = -1 Query: 487 QPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGD 308 QP P P PW Q QSS ++ G + S S T N PG G Sbjct: 310 QPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGA 369 Query: 307 LMLTAEPATGSEARVDDVDASPE 239 M G ++ + + +P+ Sbjct: 370 SMFN---TPGMQSLLQQITENPQ 389
>TOB1_RAT (Q8R5K6) Tob1 protein (Transducer of erbB-2 1)| Length = 365 Score = 30.8 bits (68), Expect = 4.1 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Frame = -1 Query: 499 PNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNS------TSQAT 338 P P QP S+P P P P ++Q Q + P + TS + N+ Q Sbjct: 244 PQPQQPPSQP-PPPPPPPQQQQQHQQQQQQQQQQQQQPQQQTSALSPNAKEFIFPNMQGQ 302 Query: 337 GSN-NSPGHGDLMLTAEPATGSEA 269 GS+ N GD L P S A Sbjct: 303 GSSTNGMFPGDSPLNLSPLQYSNA 326
>PE2R4_RAT (P43114) Prostaglandin E2 receptor, EP4 subtype (Prostanoid EP4| receptor) (PGE receptor, EP4 subtype) Length = 488 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = -3 Query: 227 ETHRRTAAGSGHDVN--QRRPDAGSDSSTTLLYLPGLSETGLV*GGSGIL 84 E+ R ++A SGH + R S +S TLLYLP L+E+ L GG +L Sbjct: 368 ESRRTSSAMSGHSRSFLSRELREISSTSHTLLYLPDLTESSL--GGKNLL 415
>OXAA_MYCTU (P65626) Membrane protein oxaA| Length = 366 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Frame = -1 Query: 562 VMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPW------EKQGQQSSGLDLKA 401 V MI++ E + + N P +KP+ +PK P + G G + A Sbjct: 273 VFGMIEKEEEAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPTEAGDTDDGAESDA 332 Query: 400 HTSDPGESTSGVRTNSTSQA 341 T P ++++ R NS A Sbjct: 333 STERPADTSNPARRNSGPSA 352
>OXAA_MYCBO (P65627) Membrane protein oxaA| Length = 366 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Frame = -1 Query: 562 VMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPW------EKQGQQSSGLDLKA 401 V MI++ E + + N P +KP+ +PK P + G G + A Sbjct: 273 VFGMIEKEEEAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPTEAGDTDDGAESDA 332 Query: 400 HTSDPGESTSGVRTNSTSQA 341 T P ++++ R NS A Sbjct: 333 STERPADTSNPARRNSGPSA 352
>HELI_HUMAN (Q9UKS7) Zinc finger protein Helios| Length = 526 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = -1 Query: 613 PETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQ 434 P T+ V P +Y +V R ERP + + N D PIS R PK +P E++ Sbjct: 341 PSTIAEVAPVISSAYSQVYHP-NRIERPISRETADSHENNMDGPISLIR--PKSRPQERE 397 Query: 433 GQQSS 419 S+ Sbjct: 398 ASPSN 402
>PE2R4_MOUSE (P32240) Prostaglandin E2 receptor, EP4 subtype (Prostanoid EP4| receptor) (PGE receptor, EP4 subtype) Length = 513 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = -3 Query: 227 ETHRRTAAGSGHDVN--QRRPDAGSDSSTTLLYLPGLSETGLV*GGSGIL 84 E+ R ++A SGH + R S +S TLLYLP L+E+ L GG +L Sbjct: 393 ESRRTSSAMSGHSRSFLARELKEISSTSQTLLYLPDLTESSL--GGRNLL 440
>DCAK1_MOUSE (Q9JLM8) Serine/threonine-protein kinase DCAMKL1 (EC 2.7.11.1)| (Doublecortin-like and CAM kinase-like 1) Length = 756 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/80 (25%), Positives = 30/80 (37%) Frame = -1 Query: 547 QRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSG 368 +R + P +N P +S PR P P S G K S G S++ Sbjct: 303 RRSKSPASTSSVNG---TPGSQLSTPRSGKSPSP----SPTSPGSLRKQRISQHGGSSTS 355 Query: 367 VRTNSTSQATGSNNSPGHGD 308 + + + N+ PG GD Sbjct: 356 LSSTKVCSSMDENDGPGEGD 375
>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 699 Score = 30.4 bits (67), Expect = 5.4 Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 12/141 (8%) Frame = -1 Query: 622 SPDPETVTP---VVPQHPKSYMEVMEMIQRGERPDDIQDINDEP---PNPDQPISKPRMA 461 +P P P + Q PK +E + ++ E D D + E P +SK Sbjct: 292 APPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTK 351 Query: 460 PKPKPWEKQGQQSSGLDLKAHTSDPGESTS---GVRTNSTSQATGSNNSPGHGDLMLTAE 290 P P K+ +SS + +S+ E+ S G NS+++ + SP + Sbjct: 352 PPP---AKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQ 408 Query: 289 PATGSE---ARVDDVDASPEQ 236 P G + R D +S E+ Sbjct: 409 PVGGGQKLLTRKADSSSSEEE 429
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/83 (24%), Positives = 32/83 (38%) Frame = -1 Query: 535 RPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTN 356 RP P+ + P + +P + Q+S A P S + N Sbjct: 912 RPTQSDGPRTSSPSRSKQSEVPWASIALRPTQGDRPQTSSPSRPAQHDPPQSSFGPTQYN 971 Query: 355 STSQATGSNNSPGHGDLMLTAEP 287 S+AT S+++PGH T+ P Sbjct: 972 LPSRATSSSHNPGHQSTSRTSSP 994
>T2FA_HUMAN (P35269) Transcription initiation factor IIF alpha subunit (EC| 2.7.11.1) (TFIIF-alpha) (Transcription initiation factor RAP74) (General transcription factor IIF polypeptide 1 74 kDa subunit protein) Length = 517 Score = 30.4 bits (67), Expect = 5.4 Identities = 23/119 (19%), Positives = 42/119 (35%) Frame = -1 Query: 631 SQGSPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKP 452 SQ P+ + P + PK E + + E ++PP D+ + + AP P Sbjct: 281 SQEEPESKAKAPQQEEGPKGVDEQSDSSEESEE--------EKPPEEDKEEEEEKKAPTP 332 Query: 451 KPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPATGS 275 + +++ S D + E++S + P G + P T S Sbjct: 333 QEKKRRKDSSEESDSSEESDIDSEASSALFMAKKKTPPKRERKPSGGSSRGNSRPGTPS 391
>SF3B1_XENLA (O57683) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (146 kDa nuclear protein) Length = 1307 Score = 30.4 bits (67), Expect = 5.4 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 13/115 (11%) Frame = -1 Query: 622 SPDPE----TVTPVVPQH--PKSYMEVMEMIQRGERPDDIQDIN-DEPPNPDQPISKPRM 464 +PDP+ T V+ + K E+ + I + D++ +N + QP SK Sbjct: 140 TPDPKLNARTFKDVMQEQYLTKEEREIRQQIAEKAKSGDLKVVNGSSASSAAQPPSK--- 196 Query: 463 APKPKPWEKQGQQSSGLDLKAHTS------DPGESTSGVRTNSTSQATGSNNSPG 317 + + W++ G Q+ G K +S PG + S +R + T N +PG Sbjct: 197 --RKRRWDQTGDQTPGSTPKKLSSWDQAEVTPGHTPSSLRWDETPGRAKGNETPG 249
>HMGN2_PIG (P80272) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -1 Query: 541 GERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGESTS 371 G+ D + DEP +S PKP+P K+ G + K +D G+ + Sbjct: 7 GDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGN 66 Query: 370 GVRTNSTSQATGSNNSPGHGD 308 N ++ + + G GD Sbjct: 67 NPAENGDAKTDQAQKAEGAGD 87
>HMGN2_HUMAN (P05204) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -1 Query: 541 GERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGESTS 371 G+ D + DEP +S PKP+P K+ G + K +D G+ + Sbjct: 7 GDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKEGN 66 Query: 370 GVRTNSTSQATGSNNSPGHGD 308 N ++ + + G GD Sbjct: 67 NPAENGDAKTDQAQKAEGAGD 87
>HMGN2_GECJA (Q64FT8) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -1 Query: 541 GERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGESTS 371 G+ D + DEP +S PKP+P K+ G + K +D G+ + Sbjct: 7 GDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGN 66 Query: 370 GVRTNSTSQATGSNNSPGHGD 308 N ++ + + G GD Sbjct: 67 NPAENGDAKTDQAQKAEGAGD 87
>HMGN2_CANFA (Q711A6) Nonhistone chromosomal protein HMG-17 (High-mobility group| nucleosome-binding domain-containing protein 2) Length = 89 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Frame = -1 Query: 541 GERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDL---KAHTSDPGESTS 371 G+ D + DEP +S PKP+P K+ G + K +D G+ + Sbjct: 7 GDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDGN 66 Query: 370 GVRTNSTSQATGSNNSPGHGD 308 N ++ + + G GD Sbjct: 67 NPAENGDAKTDQAQKAEGAGD 87
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 30.0 bits (66), Expect = 7.0 Identities = 30/95 (31%), Positives = 41/95 (43%) Frame = -1 Query: 619 PDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKPRMAPKPKPWE 440 P PET P P PK+ V +R D + P P+ P S P PKP+ Sbjct: 618 PPPETAVP--PGTPKAKSGV-------KRTDPATPV--VKPVPEAPKSGEAEEPVPKPYS 666 Query: 439 KQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATG 335 + +S SD G S+ GV ++S S+ TG Sbjct: 667 QDLSRS-----PQSLSDTGYSSDGV-SSSQSEITG 695
>TOP2B_HUMAN (Q02880) DNA topoisomerase 2-beta (EC 5.99.1.3) (DNA topoisomerase| II, beta isozyme) Length = 1626 Score = 30.0 bits (66), Expect = 7.0 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 11/97 (11%) Frame = -1 Query: 634 ESQGSPDPETVTPVV-----------PQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPD 488 ES+ D E PVV + PK + E E DD D +D+ N D Sbjct: 1339 ESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDFSE-----EEDDDADDDDDD--NND 1391 Query: 487 QPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGES 377 K + +P E + S GLD +T PG+S Sbjct: 1392 LEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKS 1428
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 30.0 bits (66), Expect = 7.0 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Frame = -1 Query: 634 ESQGSPDPETVTPVVPQH-PKSYMEVMEMIQRGERP-DDIQDINDEPPNPDQPISKPRMA 461 + + +P P TP P+H P + + P + ++E P P P P A Sbjct: 65 KEEHAPAPAAETPPAPEHPPDAEQPAAPAAEHAPTPTHEAAPAHEEGPPPAAPAEAP--A 122 Query: 460 PKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGH 314 P+P+P EK ++ + L + E+ S T + TG ++ G+ Sbjct: 123 PEPEP-EKPKEEPPSVPLSLAVEEVTEN-SVTLTWKAPEHTGKSSLDGY 169
>CRYD_GIBZE (Q4I1Q6) Putative crytochrome DASH| Length = 678 Score = 30.0 bits (66), Expect = 7.0 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 9/80 (11%) Frame = -1 Query: 490 DQPISKPRMAPKPKPWEKQGQQSSG-----LDLKAHTSDPGESTSGVRTNSTSQATGSNN 326 D ++KPR +P W KQG + G +TS G++ R N S G N Sbjct: 534 DFSVTKPRGNRRPYRWRKQGDRGRGGRGGRGGGTGNTSGNGDN----RHNEPSPPNGGNR 589 Query: 325 ----SPGHGDLMLTAEPATG 278 SP +G + +P +G Sbjct: 590 HNDFSPANGGSYMQGQPISG 609
>TLE2_BRARE (O13166) Groucho 2 protein| Length = 761 Score = 30.0 bits (66), Expect = 7.0 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 12/89 (13%) Frame = -1 Query: 541 GERPDD-IQDINDEPPN----------PDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHT 395 G++ DD + D+++E P P+ I KPR A K P SSG + T Sbjct: 248 GDKSDDLVVDVSNEDPATPRGSPAHSPPENGIDKPRPAKKDTPRRPASVASSGSTPSSKT 307 Query: 394 SDPGESTSGVRTNSTSQA-TGSNNSPGHG 311 P + S+A T N++P G Sbjct: 308 KPPEHNDKSSTPGLKSKAPTPRNDAPTPG 336
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 30.0 bits (66), Expect = 7.0 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Frame = -1 Query: 622 SPDPETVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQP-ISKPRMAPKPKP 446 SP P + P P + + I R P Q E P+P P + P P+P+P Sbjct: 528 SPSPFLPLSLTPPSPSEEIALPPPIFRVPPPLPAQ----ETPSPPAPALVPPTQPPQPQP 583 Query: 445 WEK-QGQQSSGLDLKAHTSDPGES 377 WE+ S L+ +H P + Sbjct: 584 WEEIISTFLSSLNASSHKPSPSSA 607
>NHERF_RABIT (Q28619) Ezrin-radixin-moesin-binding phosphoprotein 50 (EBP50)| (Na(+)/H(+) exchange regulatory cofactor NHE-RF) (NHERF-1) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 Length = 357 Score = 30.0 bits (66), Expect = 7.0 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Frame = -1 Query: 505 EPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSN- 329 E +P++ +PR+ K+G G +L + S PG+ V +S ++A+G Sbjct: 140 EKSHPERRELRPRLCAM-----KKGPNGYGFNLHSDKSRPGQFIRAVDPDSPAEASGLRE 194 Query: 328 ------------NSPGHGDLMLTAEPATGSEARVDDVDASPEQ 236 HGD ++TA A G EA++ VD ++ Sbjct: 195 QDRIVEVNGVCVEGKQHGD-VVTAIKAGGDEAKLLVVDKETDE 236
>GR65_RAT (O35254) Golgi reassembly-stacking protein 1 (Golgi| reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi peripheral membrane protein p65) Length = 450 Score = 30.0 bits (66), Expect = 7.0 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNS 323 P QP + P AP P P Q SSG +L + SD E+ V + S Sbjct: 220 PAKTPQPNAFPLGAPPPWPIP---QDSSGPELGSRQSDYMEALPQVPGGFMEEQLPGPGS 276 Query: 322 PGHG 311 PGHG Sbjct: 277 PGHG 280
>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 30.0 bits (66), Expect = 7.0 Identities = 19/59 (32%), Positives = 23/59 (38%) Frame = -1 Query: 487 QPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHG 311 QP P P PW Q QSS P T+G TN+ S + G+ S G Sbjct: 301 QPSRTENRDPLPNPWAPQTSQSS----------PASGTTGSTTNTMSTSGGTATSTPAG 349
>PSAA_CYACA (Q9TLQ5) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)| (PSI-A) Length = 752 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 38 TSKVLISSNNPIPAS-KGCRCPPKLNQFLIILGDTAMWCWNLNQHQVDADSH 190 T+K+L+ NP+P S + P ++ L T W WNL+ D DSH Sbjct: 12 TAKILVD-RNPVPTSFEKWGVPGHFSRSLAKGPKTTTWIWNLHADVHDFDSH 62
>PDLI7_BOVIN (Q3SX40) PDZ and LIM domain protein 7| Length = 424 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 3/102 (2%) Frame = -1 Query: 607 TVTPVVPQHPKSYMEVMEMIQRGERPDDIQDINDEP---PNPDQPISKPRMAPKPKPWEK 437 T T + + +++ + R E P EP P P S+P A P E+ Sbjct: 140 TGTEFMQDPDEEHLKKSSQVPRTEAPTPASATPQEPWPGPTTPSPTSRPPWAVDPAFAER 199 Query: 436 QGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHG 311 + L HT + RT+ A G + G G Sbjct: 200 YAPDKTSTVLTRHTQPATPTPMQNRTSIVQAAAGGGHGGGGG 241
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 29.6 bits (65), Expect = 9.1 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 31/164 (18%) Frame = -1 Query: 595 VVPQHPKSYMEVMEMIQRGERPDDIQD----------INDEPPNPDQPISKPRMAPKPKP 446 V +S EV E +R + P+ + D ND + ++P+ +P P+P+P Sbjct: 142 VTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEPVVEPEPEPEPEP 201 Query: 445 W------------EKQGQQSSGLDLKAHTS----DPGESTSGVRTNSTSQATGSNNSPGH 314 E ++++ D++ TS D + +RT S + T N P Sbjct: 202 EPEPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADVAPAQEDLRTFSWASVTSKNLPPS- 260 Query: 313 GDLMLTAEPATGSEARVDDVDAS---PEQ*LWKRIDEQ--QRDQ 197 A P TG+ V V AS PE +I Q QRDQ Sbjct: 261 -----GAVPVTGTPPHVVKVPASQPRPESKPDSQIPPQRPQRDQ 299
>VG11_BPPZA (P68931) Lower collar protein (Late protein GP11)| Length = 293 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = -1 Query: 484 PISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDL 305 P+ R+ K + ++ D+K + G S++ + N TS+ TG+ S G G + Sbjct: 100 PLENTRVGVKSNT-KNDTDRNDNRDVKQDLTSNGTSSTDAKQNDTSKTTGNEKSSGSGSI 158
>VG11_BPPH2 (P68930) Lower collar protein (Late protein GP11)| Length = 293 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = -1 Query: 484 PISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDL 305 P+ R+ K + ++ D+K + G S++ + N TS+ TG+ S G G + Sbjct: 100 PLENTRVGVKSNT-KNDTDRNDNRDVKQDLTSNGTSSTDAKQNDTSKTTGNEKSSGSGSI 158
>SSFA2_MOUSE (Q922B9) Sperm-specific antigen 2| Length = 264 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -1 Query: 418 GLDLKAHTSDPGESTSGVRTNSTSQATGSNNSPGHGDLMLTAEPATGSEARV 263 GL A+ PGES+ V + +TS+++ +SP H + P + AR+ Sbjct: 96 GLGDMAYEIPPGESSESVFSQATSESSSVCSSPSHTNRRSRGLPGSKPRARL 147
>TONB_HELPJ (Q9ZJP4) Protein tonB| Length = 280 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 538 ERPDDIQDINDEPPNPDQPISKPRMAPKPKPWEK 437 E+P + +EP +P KP+ PKPKP K Sbjct: 79 EKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPK 112
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 9/83 (10%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEKQGQ------QSSGLDLKAHTS---DPGESTSGVRTNST 350 PP P+ P + P P P + G+ QSSG +L S P S + V+ + Sbjct: 1714 PPLPNTAAPPPAVQPAPPPLPEMGKQSRLTGQSSGNNLTKSLSVPDGPQSSPARVQLQKS 1773 Query: 349 SQATGSNNSPGHGDLMLTAEPAT 281 + GS N L L + A+ Sbjct: 1774 ASVPGSTNVGAPSSLSLDSTTAS 1796
>RM19_PONPY (Q5R8M4) 39S ribosomal protein L19, mitochondrial precursor (L19mt)| (MRP-L19) Length = 292 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 4/35 (11%) Frame = -1 Query: 517 DINDEP----PNPDQPISKPRMAPKPKPWEKQGQQ 425 D+N +P PN P+++ ++ KPKPW K+ ++ Sbjct: 201 DVNMKPEVQEPNQKVPVNELKVKMKPKPWSKRWER 235
>RM19_HUMAN (P49406) 39S ribosomal protein L19, mitochondrial precursor (L19mt)| (MRP-L19) (MRP-L15) Length = 292 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 4/35 (11%) Frame = -1 Query: 517 DINDEP----PNPDQPISKPRMAPKPKPWEKQGQQ 425 D+N +P PN P+++ ++ KPKPW K+ ++ Sbjct: 201 DVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWER 235
>PRP45_CANAL (Q5AC37) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing| protein 45) Length = 286 Score = 29.6 bits (65), Expect = 9.1 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Frame = -1 Query: 595 VVPQHPKSYMEVMEMIQRGERPDDIQDINDEPPNPDQPIS----KPRMAPKPKPWEKQGQ 428 +V PK ++ +++ + D I + +DEP N I P P P P ++Q Q Sbjct: 79 LVHNFPKPELDENVILETKKIIDSILNPSDEPTNDINYIKYENPNPNPNPNPNPNQEQQQ 138 Query: 427 QSSG-----LDLKAHTSDP 386 QSS + +K DP Sbjct: 139 QSSSSSSKIIQIKQFQEDP 157
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Frame = -1 Query: 502 PPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDP------GESTSGVRTNSTSQA 341 PP +QP P + P P P G S + T++P G + + + ++S Sbjct: 935 PPPANQPAPSPHLVPSPAPSPGPGPVPS----RPPTAEPPPCLRRGAAAADLLSSSPESQ 990 Query: 340 TGSNNSPGHGDLMLTAEPATGSE 272 G PG G +L +E Sbjct: 991 HGGTQPPGGGQPLLQPTKVDAAE 1013
>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1) Length = 814 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/110 (21%), Positives = 44/110 (40%) Frame = -1 Query: 517 DINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTSQAT 338 ++ EP + S P +P P E+ + + A PGE R++S +QA Sbjct: 65 EVRTEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQARDERSDSRAQAV 124 Query: 337 GSNNSPGHGDLMLTAEPATGSEARVDDVDASPEQ*LWKRIDEQQRDQDMM 188 S ++ G+ AEP D+ S + + E++ D++ Sbjct: 125 -SEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVL 173
>YDIS_ECOLI (P77337) Probable electron transfer flavoprotein-quinone| oxidoreductase ydiS (EC 1.5.5.-) Length = 429 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +2 Query: 20 IRDNVSTSKVLISSNNPIPASKGCRCPPKLNQFLIILGDTAMWCWNL 160 IR +S K+L S + +P P +N+ ++I+GD A +C NL Sbjct: 264 IRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNL 310
>TBB1_NEIMB (Q09057) Transferrin-binding protein 2 precursor (TBP-2)| Length = 711 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -1 Query: 526 DIQDINDEPPNPDQPISKPRMAPKPKPWEKQGQQSSGLDLKAHTSDPGESTSGVRTNSTS 347 D+ ++ E P P P + + KP+ + QG + LK PG S V+ N + Sbjct: 29 DLDSVDTEAPRP-APKYQDVSSEKPQAQKDQGGYGFAMRLKRRNWYPGAEESEVKLNESD 87 Query: 346 -QATGSNNSP 320 +ATG P Sbjct: 88 WEATGLPTKP 97
>SELO_HUMAN (Q9BVL4) Selenoprotein O| Length = 669 Score = 29.6 bits (65), Expect = 9.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 337 PWPGWCCWFELPMSIRQGRLCELSGPGRNFVGLASPTA 450 P PG C P +RQ RL LS P +GL +P A Sbjct: 76 PVPGACFTRVQPTPLRQPRLVALSEPALALLGLGAPPA 113
>ERCC1_ARATH (Q9MA98) DNA excision repair protein ERCC-1 (EC 3.1.-.-) (AtERCC1)| (AtRAD10) (Ultraviolet hypersensitive 7) Length = 410 Score = 29.6 bits (65), Expect = 9.1 Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 9/90 (10%) Frame = -1 Query: 574 SYMEVMEMIQRGERPDDIQDINDEPPNPDQPISKP---------RMAPKPKPWEKQGQQS 422 SY EV+E Q P + P Q S+ P P Q Sbjct: 32 SYQEVLESSQTKSTPPSLF-------KPSQSFSQAFAFVKSSDVYSPPPPSSAAASSSQP 84 Query: 421 SGLDLKAHTSDPGESTSGVRTNSTSQATGS 332 SG H+S T G ++ST ATGS Sbjct: 85 SGASQVPHSSSQTHQTDGASSSSTPVATGS 114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,567,983 Number of Sequences: 219361 Number of extensions: 2375984 Number of successful extensions: 8626 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 7508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8463 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
