>PKP4_MOUSE (Q68FH0) Plakophilin-4 (Armadillo-related protein)|
          Length = 1190

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 17/85 (20%)
 Frame = +3

Query: 477 ETLQRPSTRGRALSR----------PSWIT-------RLVFRTCLFLHFGLARFTRSRSF 605
           +TL +PS   RA+ R          PS++T       R   RT L   FG    T SR  
Sbjct: 196 QTLVQPSVANRAMRRVSSVPSRAQSPSYVTSTGVSPSRGSLRTSLGSGFGSPSVTDSRPL 255

Query: 606 *PLTLSSSCAPCIRWLGLCSDRPCT 680
            P   SSS  P  R     S RP +
Sbjct: 256 NPSAYSSSTLPAQRAASPYSQRPAS 280

>V2A_PSVJ (P28727) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 834

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 668 VRAKSKPTDARSTGTRKSQRSKASRTSESSQAKMQEEAGP 549
           V A++ PT       +KS+R +ASRTS  S +      GP
Sbjct: 790 VSAQTSPTKQEGPWAQKSERVEASRTSRDSVSLFPASTGP 829


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,021,908
Number of Sequences: 219361
Number of extensions: 1859715
Number of successful extensions: 4749
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4748
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)