ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags9p04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 60.0 bits (30), Expect = 3e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1 tttgaaaatctgtgctatcaaagcccctggttttggag 38 ||||||||| || ||||||||||||||||||||||||| Sbjct: 669 tttgaaaatttgcgctatcaaagcccctggttttggag 706
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 1077 gctatcaaagcccctggttttgg 1099
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 812576 gctatcaaagcccctggttttgg 812554
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 95710 gctatcaaagcccctggttttgg 95688
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 1077 gctatcaaagcccctggttttgg 1099
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 745 gctatcaaagcccctggttttgg 767
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gctatcaaagcccctggttttgg 36 ||||||||||||||||||||||| Sbjct: 71 gctatcaaagcccctggttttgg 93
>gb|AY684149.1| Paramecium tetraurelia heat shock protein 60 mRNA, partial cds Length = 763 Score = 44.1 bits (22), Expect = 0.016 Identities = 28/30 (93%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| |||||||||||| |||||||| Sbjct: 598 tctgtgctgtcaaagcccctgcttttggag 627
>gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta subunit mRNA, partial cds Length = 1471 Score = 44.1 bits (22), Expect = 0.016 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 atcaaagcccctggttttggag 38 |||||||||||||||||||||| Sbjct: 416 atcaaagcccctggttttggag 437
>emb|CR932193.1|CNS0KYH7 Paramecium tetraurelia, hsp60, putative, complete gene Length = 2019 Score = 44.1 bits (22), Expect = 0.016 Identities = 28/30 (93%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| |||||||||||| |||||||| Sbjct: 1019 tctgtgctgtcaaagcccctgcttttggag 1048
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 44.1 bits (22), Expect = 0.016 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tgtgctatcaaagcccctggttttgg 36 ||||| |||||||||||||||||||| Sbjct: 113520 tgtgccatcaaagcccctggttttgg 113495 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 atcaaagcccctggttttgg 36 |||||||||||||||||||| Sbjct: 125301 atcaaagcccctggttttgg 125282
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 44.1 bits (22), Expect = 0.016 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 atcaaagcccctggttttggag 38 |||||||||||||||||||||| Sbjct: 1221 atcaaagcccctggttttggag 1242
>gb|BT017311.1| Zea mays clone EL01N0317H06.c mRNA sequence Length = 1194 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 121 tctgtgctgtcaaagctcctggttttgg 148
>emb|CR932188.1|CNS0KYH2 Paramecium tetraurelia, hsp60, putative, complete gene Length = 2017 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttggag 38 |||||| |||||||||||| |||||||| Sbjct: 1020 tgtgctgtcaaagcccctgcttttggag 1047
>gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete sequence Length = 126204 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aaaatctgtgctatcaaagc 24 |||||||||||||||||||| Sbjct: 68792 aaaatctgtgctatcaaagc 68773
>emb|Z11546.1|ZMCHHSP60 Z.mays mRNA for mitochondrial chaperonin hsp60 Length = 2138 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 976 tctgtgctgtcaaagctcctggttttgg 1003
>emb|Z12115.1|ZMCPNAGB Z.mays CPNB gene encoding mitochondrial chaperonin-60 Length = 2104 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 960 tctgtgctgtcaaagctcctggttttgg 987
>emb|Z12114.1|ZMCPNAGA Z.mays CPNA gene encoding mitochondrial chaperonin-60 Length = 2247 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 1104 tctgtgctgtcaaagctcctggttttgg 1131
>gb|BT023997.1| Zea mays clone EL01N0314G02 mRNA sequence Length = 2188 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 1027 tctgtgctgtcaaagctcctggttttgg 1054
>gb|AY109623.1| Zea mays CL2221_1 mRNA sequence Length = 2265 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 1104 tctgtgctgtcaaagctcctggttttgg 1131
>gb|L21006.1|MZECPN60X Zea mays mitochondrial chaperonin 60 (mtcpn60II) mRNA, complete cds Length = 2139 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 1068 tctgtgctgtcaaagctcctggttttgg 1095
>gb|L21008.1|MZECPN60B Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60II) gene, complete cds Length = 7905 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 5232 tctgtgctgtcaaagctcctggttttgg 5259
>gb|L21007.1|MZECPN60A Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60I) gene, complete cds Length = 6575 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttgg 36 |||||||| ||||||| ||||||||||| Sbjct: 4147 tctgtgctgtcaaagctcctggttttgg 4174
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 tcaaagcccctggttttgg 36 ||||||||||||||||||| Sbjct: 568589 tcaaagcccctggttttgg 568607
>ref|NM_179872.1| Arabidopsis thaliana ATP binding / protein binding AT2G33210 mRNA, complete cds Length = 2094 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| | || |||||||||||||||| Sbjct: 1063 tctgtgctgtgaaggcccctggttttggag 1092
>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence Length = 233631 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 tttgaaaatctgtgctat 18 |||||||||||||||||| Sbjct: 41790 tttgaaaatctgtgctat 41773
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 1070 tgctattaaagctcctggttttggag 1095
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 1090 tgctattaaagctcctggttttggag 1115
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| || |||||||||||||||| Sbjct: 1063 tgctattaaggcccctggttttggag 1088
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||| ||||||| ||||||||||| Sbjct: 740869 tgtgctgtcaaagcgcctggttttgg 740894
>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence Length = 107795 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 ||||||| || || |||||||||||||||| Sbjct: 5625 tctgtgccattaaggcccctggttttggag 5654
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||| ||||||| ||||||||||||| Sbjct: 1047 tgctctcaaagctcctggttttggag 1072
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence Length = 159693 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggtttt 34 |||| ||||||||||||||||| Sbjct: 91091 tgctttcaaagcccctggtttt 91112
>gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete sequence Length = 120364 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Minus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||||| ||||| ||||||||||| Sbjct: 75995 tgtgctataaaagctcctggttttgg 75970
>gb|BC051281.1| Homo sapiens CD163 molecule, transcript variant 1, mRNA (cDNA clone MGC:59680 IMAGE:6280265), complete cds Length = 3780 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 348 tgctatcaaagcccctgg 365
>emb|Z22970.1|HSM130AC2 H.sapiens mRNA for M130 antigen cytoplasmic variant 2 Length = 4950 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>emb|Z22969.1|HSM130AC1 H.sapiens mRNA for M130 antigen cytoplasmic variant 1 Length = 3786 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>emb|Z22971.1|HSM130AE H.sapiens mRNA for M130 antigen extracellular variant Length = 3802 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>emb|Z22968.1|HSM130A H.sapiens mRNA for M130 antigen Length = 3703 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>gb|BT000103.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1799 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| | || |||||||||||||||| Sbjct: 911 tctgtgctgtgaaggcccctggttttggag 940
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||| ||||||| ||||||||||| Sbjct: 812969 tgtgctgtcaaagcgcctggttttgg 812994
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||| ||||||| ||||||||||| Sbjct: 823979 tgtgctgtcaaagcgcctggttttgg 824004
>gb|AY136360.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1982 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| | || |||||||||||||||| Sbjct: 951 tctgtgctgtgaaggcccctggttttggag 980
>ref|NM_004244.3| Homo sapiens CD163 molecule (CD163), transcript variant 1, mRNA Length = 3806 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>ref|NM_203416.1| Homo sapiens CD163 molecule (CD163), transcript variant 2, mRNA Length = 3728 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 374 tgctatcaaagcccctgg 391
>gb|AC114756.4| Homo sapiens BAC clone RP11-284M14 from 4, complete sequence Length = 85149 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 atcaaagcccctggtttt 34 |||||||||||||||||| Sbjct: 35699 atcaaagcccctggtttt 35716
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| | || |||||||||||||||| Sbjct: 23776 tctgtgctgtgaaggcccctggttttggag 23805
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence Length = 188117 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gaaaatctgtgctatcaa 21 |||||||||||||||||| Sbjct: 11700 gaaaatctgtgctatcaa 11717
>dbj|AK087672.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330002H12 product:unclassifiable, full insert sequence Length = 4260 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 19 caaagcccctggttttgg 36 |||||||||||||||||| Sbjct: 3456 caaagcccctggttttgg 3439
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 161467 tgctattaaagctcctggttttggag 161492
>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence Length = 174941 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 gaaaatctgtgctatcaa 21 |||||||||||||||||| Sbjct: 162137 gaaaatctgtgctatcaa 162154
>gb|AC131206.2| Homo sapiens 12 BAC RP11-157G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177260 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 85017 tgctatcaaagcccctgg 85000
>gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, complete sequence Length = 147133 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 gaaaatctgtgctatcaa 21 |||||||||||||||||| Sbjct: 49592 gaaaatctgtgctatcaa 49575
>dbj|AK175415.1| Arabidopsis thaliana mRNA for mitochondrial chaperonin (HSP60), complete cds, clone: RAFL21-85-D12 Length = 2089 Score = 36.2 bits (18), Expect = 4.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 9 tctgtgctatcaaagcccctggttttggag 38 |||||||| | || |||||||||||||||| Sbjct: 1074 tctgtgctgtgaaggcccctggttttggag 1103
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 110494 tgctattaaagctcctggttttggag 110519
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 1069 tgctattaaagctcctggttttggag 1094
>gb|AF151099.1|AF151099 Mus musculus TDAG51/Ipl homologue 1 (Tih1) gene, complete cds Length = 3978 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 atcaaagcccctggtttt 34 |||||||||||||||||| Sbjct: 1248 atcaaagcccctggtttt 1231
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| ||||| ||||||||||||| Sbjct: 1090 tgctattaaagctcctggttttggag 1115
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctggttttggag 38 |||||| || |||||||||||||||| Sbjct: 1191 tgctattaaggcccctggttttggag 1216
>emb|Y18390.1|HSA118390 Homo sapiens CD163 gene, exon 3 Length = 900 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 403 tgctatcaaagcccctgg 420
>gb|DQ058615.1| Homo sapiens CD163 mRNA, complete cds Length = 3434 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tgctatcaaagcccctgg 30 |||||||||||||||||| Sbjct: 288 tgctatcaaagcccctgg 305
>gb|M31918.1|LPNHTPBG Legionella pneumonphila htp heat shock operon HtpB (hptB gene), complete cds Length = 1811 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||| ||||||| ||||||||||| Sbjct: 850 tgtgctgtcaaagcgcctggttttgg 875
>gb|M91673.1|LPNHTPB Legionella pneumophila 58-kDa common antigen (htpB) gene, complete cds Length = 2016 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Plus Query: 11 tgtgctatcaaagcccctggttttgg 36 |||||| ||||||| ||||||||||| Sbjct: 1024 tgtgctgtcaaagcgcctggttttgg 1049
>gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, complete sequence Length = 225487 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 atcaaagcccctggtttt 34 |||||||||||||||||| Sbjct: 111012 atcaaagcccctggtttt 111029 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 284,528 Number of Sequences: 3902068 Number of extensions: 284528 Number of successful extensions: 71676 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71491 Number of HSP's gapped (non-prelim): 185 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
