Clone Name | bags9o20 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full insert sequence Length = 622 Score = 329 bits (166), Expect = 6e-87 Identities = 295/338 (87%) Strand = Plus / Plus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 46 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggctcagc 105 Query: 134 aaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaagagg 193 |||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| |||| Sbjct: 106 aaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagaggagg 165 Query: 194 cggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctca 253 | ||||| || |||||||| |||||||| |||||||||||||| || ||||| ||| | Sbjct: 166 ctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaaggttg 225 Query: 254 ccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaa 313 | |||| |||||||||||||||||||||||||| || |||||||| |||||| | || Sbjct: 226 cagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaa 285 Query: 314 aaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttc 373 |||| | ||| |||||||||||||| |||| |||||||| || |||||||||||||||| Sbjct: 286 aaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttc 345 Query: 374 tgaggcacgtcaccactgtgaagaactaaaggttgatg 411 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 346 tgaggcatgtcaccactgtgaagaactaagggttgatg 383
>dbj|AK059032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C05, full insert sequence Length = 652 Score = 321 bits (162), Expect = 2e-84 Identities = 294/338 (86%) Strand = Plus / Plus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | ||||||||||||| ||||||| Sbjct: 79 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaaggggctcagc 138 Query: 134 aaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaagagg 193 |||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| |||| Sbjct: 139 aaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagaggagg 198 Query: 194 cggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctca 253 | ||||| || |||||||| |||||||| |||||||||||||| || ||||| ||| | Sbjct: 199 ctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaaggttg 258 Query: 254 ccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaa 313 | |||| |||||||||||||||||||||||||| || |||||||| |||||| | || Sbjct: 259 cagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaa 318 Query: 314 aaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttc 373 |||| | ||| |||||||||||||| |||| |||||||| || |||||||||||||||| Sbjct: 319 aaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttc 378 Query: 374 tgaggcacgtcaccactgtgaagaactaaaggttgatg 411 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 379 tgaggcatgtcaccactgtgaagaactaagggttgatg 416
>ref|XM_473769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 319 bits (161), Expect = 6e-84 Identities = 287/329 (87%) Strand = Plus / Plus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 5 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggctcagc 64 Query: 134 aaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaagagg 193 |||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| |||| Sbjct: 65 aaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagaggagg 124 Query: 194 cggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctca 253 | ||||| || |||||||| |||||||| |||||||||||||| || ||||| ||| | Sbjct: 125 ctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaaggttg 184 Query: 254 ccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaa 313 | |||| |||||||||||||||||||||||||| || |||||||| |||||| | || Sbjct: 185 cagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaa 244 Query: 314 aaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttc 373 |||| | ||| |||||||||||||| |||| |||||||| || |||||||||||||||| Sbjct: 245 aaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttc 304 Query: 374 tgaggcacgtcaccactgtgaagaactaa 402 ||||||| ||||||||||||||||||||| Sbjct: 305 tgaggcatgtcaccactgtgaagaactaa 333
>gb|AY108236.1| Zea mays PCO086968 mRNA sequence Length = 750 Score = 238 bits (120), Expect = 2e-59 Identities = 270/320 (84%) Strand = Plus / Plus Query: 81 caggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgt 140 |||||||| | |||| || ||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 158 caggcgccaaggtgggattcagcagttgctggctgcggagcaggaggctcagcaaattgt 217 Query: 141 aaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagag 200 ||||| || || |||||||| | |||||||||||| |||| ||||| ||||| ||||| Sbjct: 218 gaatgcggctagagctgctaagtcagcaaggcttaggcaagcgaaagaggaggcagagag 277 Query: 201 agagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagac 260 || ||||| || |||||||| |||||||||||||| |||||||| ||| || | |||| Sbjct: 278 ggaaatagccgaataccgtgcccagatggaggctgagttccagaggaaggtcgcagagag 337 Query: 261 cagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattga 320 ||| |||||||||||||| || ||||| || || ||| ||||||||| | ||||| || Sbjct: 338 cagtggtgactctggtgcgaacgtcaagcgtctcgaggaagagacaacggcgaaaatcga 397 Query: 321 acagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggca 380 ||||||||| |||||||| |||| |||||||||||| || |||||||||||||||||||| Sbjct: 398 acagctcaaccagcaggctgcaagcatctccccagatgtcattcagatgcttctgaggca 457 Query: 381 cgtcaccactgtgaagaact 400 |||||||| |||||||||| Sbjct: 458 tgtcaccaccgtgaagaact 477
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 42480 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 42421 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 42420 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 42361 Query: 382 gtcaccactgtgaagaactaaaggttgatg 411 ||||||||||||||||||||| |||||||| Sbjct: 42360 gtcaccactgtgaagaactaagggttgatg 42331 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 43194 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggctcagc 43135 Query: 134 aaattgtaaatgctgccagggctg 157 |||| ||||||||||| ||||||| Sbjct: 43134 aaatagtaaatgctgctagggctg 43111 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 164 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 223 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 42676 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 42617 Query: 224 agatggaggctgatttccagag 245 ||||||||||||| || ||||| Sbjct: 42616 agatggaggctgaatttcagag 42595
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 30409102 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 30409043 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 30409042 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 30408983 Query: 382 gtcaccactgtgaagaactaaaggttgatg 411 ||||||||||||||||||||| |||||||| Sbjct: 30408982 gtcaccactgtgaagaactaagggttgatg 30408953 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 30409816 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggctcagc 30409757 Query: 134 aaattgtaaatgctgccagggctg 157 |||| ||||||||||| ||||||| Sbjct: 30409756 aaatagtaaatgctgctagggctg 30409733 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 164 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 223 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 30409298 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 30409239 Query: 224 agatggaggctgatttccagag 245 ||||||||||||| || ||||| Sbjct: 30409238 agatggaggctgaatttcagag 30409217
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 163 bits (82), Expect = 8e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 158998 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 158939 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 158938 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 158879 Query: 382 gtcaccactgtgaagaactaaaggttgatg 411 ||||||||||||||||||||| |||||||| Sbjct: 158878 gtcaccactgtgaagaactaagggttgatg 158849 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 74 acgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagc 133 |||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 159712 acgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggctcagc 159653 Query: 134 aaattgtaaatgctgccagggctg 157 |||| ||||||||||| ||||||| Sbjct: 159652 aaatagtaaatgctgctagggctg 159629 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 164 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 223 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 159194 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 159135 Query: 224 agatggaggctgatttccagag 245 ||||||||||||| || ||||| Sbjct: 159134 agatggaggctgaatttcagag 159113
>ref|XM_467332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 135 bits (68), Expect = 2e-28 Identities = 182/220 (82%) Strand = Plus / Plus Query: 181 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 240 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 304 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 363 Query: 241 cagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaa 300 ||||| ||| | | |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 364 cagaggaaggttgcggagagtagcggtgattctggtgcaaacgtaaaacggcttgagcaa 423 Query: 301 gagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtg 360 || || || ||||||| || || ||| ||||||| ||||| ||||||| || ||| Sbjct: 424 gaaactgacacgaaaattgcgcaactgaaggagcaggctgcaaatgtctcccctgaagtg 483 Query: 361 attcagatgcttctgaggcacgtcaccactgtgaagaact 400 || ||||||||||| ||||| || ||||| |||||||||| Sbjct: 484 atccagatgcttcttaggcatgtaaccaccgtgaagaact 523 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 149 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 238 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 295
>gb|AY103882.1| Zea mays PCO130190 mRNA sequence Length = 760 Score = 119 bits (60), Expect = 1e-23 Identities = 255/320 (79%) Strand = Plus / Plus Query: 81 caggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgt 140 |||||||| ||||| |||||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 153 caggcgccagagtgggatccagcagttgctggctgcggagcaggaggctcagcaaattgt 212 Query: 141 aaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagag 200 ||||| || || ||||| || | || ||||| ||| |||||||||| ||||| ||| | Sbjct: 213 gaatgccgctagagctgccaagtcagcgaggctcaggcaagcaaaagaggaggctgagcg 272 Query: 201 agagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagac 260 || ||||| || |||||||| |||||||||||||| || ||||| ||| | | |||| Sbjct: 273 ggaaatagccgaataccgtgcccagatggaggctgagtttcagaggaaggttgcagagag 332 Query: 261 cagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattga 320 |||||| ||||| |||||||| ||||| || || ||| |||| || | || || || Sbjct: 333 cagcggcgactccggtgcaaacgtcaagcgtctcgaggaagaaacggcggcgaagatcga 392 Query: 321 acagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggca 380 || |||| |||||||| ||| ||||||||| || || ||||||||||||||| |||| Sbjct: 393 gcaactcacccagcaggccacaagcatctccccggatgtcattcagatgcttctgcggca 452 Query: 381 cgtcaccactgtgaagaact 400 |||||||| || ||||||| Sbjct: 453 tgtcaccaccgtcaagaact 472
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 181 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 240 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 28917561 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 28917502 Query: 241 cagag 245 ||||| Sbjct: 28917501 cagag 28917497 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 28917405 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 28917346 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 28917345 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 28917286 Query: 382 gtcaccactgtgaagaact 400 || ||||| |||||||||| Sbjct: 28917285 gtaaccaccgtgaagaact 28917267 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 149 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 28918325 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 28918268
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 181 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 240 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 110253 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 110194 Query: 241 cagag 245 ||||| Sbjct: 110193 cagag 110189 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 110097 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 110038 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 110037 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 109978 Query: 382 gtcaccactgtgaagaact 400 || ||||| |||||||||| Sbjct: 109977 gtaaccaccgtgaagaact 109959 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 149 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 111017 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 110960
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 181 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 240 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 619 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 560 Query: 241 cagag 245 ||||| Sbjct: 559 cagag 555 Score = 77.8 bits (39), Expect = 4e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 321 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 463 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 404 Query: 322 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 381 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 403 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 344 Query: 382 gtcaccactgtgaagaact 400 || ||||| |||||||||| Sbjct: 343 gtaaccaccgtgaagaact 325 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 149 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1383 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1326
>emb|AJ005900.1|NTA005900 Nicotiana tabacum mRNA for V-ATPase subunit G (vag2 gene) Length = 552 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 257 agaccagcggtgactctggtgcaaatgtcaaacgccttgagcaaga 302 |||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 266 agactagcggtgattcgggtgctaatgtcaaacgccttgagcaaga 311 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 114 tgcagagcaagatgctcagcaaattgtaaatgctgccagg 153 |||||||||||| ||||| || || || |||||||||||| Sbjct: 123 tgcagagcaagaagctcaacatatagtcaatgctgccagg 162
>gb|DQ284486.1| Solanum tuberosum clone 020G11 ATPase-like mRNA, complete cds Length = 716 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 367 atgcttctgaggcacgtcaccactgtgaagaactaaa 403 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 341 atgcttctgaggcacgtaaccacagtgaagaactaaa 377 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 202 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 261 ||||||||||| | |||||| | ||||||||||| || ||||||||||| |||| Sbjct: 176 gagatagctgaattccgtgcttacatggaggctgaatttcagagaaagcttgaacagact 235 Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgag 297 || |||||||| ||||| ||||||||||| |||||| Sbjct: 236 agtggtgactcaggtgctaatgtcaaacgtcttgag 271
>emb|AJ005899.1|NTA005899 Nicotiana tabacum mRNA for V-ATPase subunit G (vag1 gene) Length = 807 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 364 cagatgcttctgaggcacgtcaccactgtgaagaactaa 402 |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 346 cagatgctcctgaggcacgtaaccacagtgaagaactaa 384 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 202 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 261 ||||||||||| | ||||| | ||||||||||| || ||||||||||| |||| Sbjct: 184 gagatagctgaatttcgtgcttacatggaggctgagtttcagagaaagcttgaacagact 243 Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagcaaga 302 || |||||||| || || ||||||||||| ||||||||||| Sbjct: 244 agtggtgactcgggcgctaatgtcaaacgtcttgagcaaga 284
>dbj|AK068212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D16, full insert sequence Length = 1366 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 149 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1069 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1126
>emb|AJ879064.1| Capsicum chinense mRNA for ATPase Length = 617 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 202 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 261 ||||||||||| | |||||| | |||||||| || || ||||||||||| |||| Sbjct: 198 gagatagctgaattccgtgcttacatggaggccgagtttcagagaaagcttgaacagact 257 Query: 262 agcggtgactctggtgcaaatgtcaaacgccttgagc 298 || |||||||| ||||| ||||||||||| ||||||| Sbjct: 258 agtggtgactcaggtgctaatgtcaaacggcttgagc 294 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 agatgcttctgaggcacgtcaccactgtgaagaactaa 402 |||||||||||||||| || || || |||||||||||| Sbjct: 361 agatgcttctgaggcatgtaacgacagtgaagaactaa 398
>gb|AY149472.1| Acinetobacter baumannii strain 8399 siderophore and iron transport locus, complete sequence Length = 21931 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 312 aaaaattgaacagctcaagcagca 335 |||||||||||||||||||||||| Sbjct: 3128 aaaaattgaacagctcaagcagca 3151
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence Length = 110895 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 271 tctggtgcaaatgtcaaacgccttgagcaagagac 305 |||||||| |||||||| || |||||||||||||| Sbjct: 39 tctggtgctaatgtcaagcgacttgagcaagagac 73
>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence Length = 128239 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 271 tctggtgcaaatgtcaaacgccttgagcaagagac 305 |||||||| |||||||| || |||||||||||||| Sbjct: 102402 tctggtgctaatgtcaagcgacttgagcaagagac 102436
>ref|NM_118502.2| Arabidopsis thaliana unknown protein AT4G23710 mRNA, complete cds Length = 697 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 146 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 122 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 171
>ref|NM_180158.2| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.2 mRNA, complete cds Length = 834 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 268 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 327 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 328 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 377
>ref|NM_111005.3| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.1 mRNA, complete cds Length = 665 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on chromosome 1 Contains the 5' end of the CDC42BPA gene for CDC42 binding protein kinase alpha (DMPK-like), a cathepsin B (CTSB) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 124156 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 486 ttttgccacttccagctgtaat 507 |||||||||||||||||||||| Sbjct: 3878 ttttgccacttccagctgtaat 3899
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 146 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 9976 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 10025
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 146 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 68385 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 68434
>gb|AY114730.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G AVMA10 (At3g01390) mRNA, complete cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 28 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 87 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 88 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 137
>gb|AY072365.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) (At3g01390) mRNA, complete cds Length = 654 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>emb|BX825355.1|CNS0A6BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZE11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 613 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 48 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 107 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 108 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 157
>gb|BT003107.1| Arabidopsis thaliana At4g23710 mRNA, complete cds Length = 321 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 146 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 16 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 65
>emb|AJ005901.1|ATA005901 Arabidopsis thaliana mRNA for V-ATPase subunit G (vag1 gene) Length = 528 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 66 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 125 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 126 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 175
>gb|AF184068.1|AF184068 Citrus limon vacuolar membrane ATPase subunit G (LVMA10) mRNA, complete cds Length = 500 Score = 44.1 bits (22), Expect = 0.54 Identities = 121/154 (78%) Strand = Plus / Plus Query: 92 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgcca 151 ||||||| ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 113 gtggaattcagcaattgctggctgctgaacaagaagctcaacacattgttgctgctgcca 172 Query: 152 gggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctg 211 | ||| |||| ||| || || | | |||| ||||||||||| || || ||||| |||| Sbjct: 173 gaaatgcaaaaatggctagactgaagcaagccaaagaagaggctgaaagggagattgctg 232 Query: 212 agtaccgtgcgcagatggaggctgatttccagag 245 | || || || ||| ||||| ||| |||||||| Sbjct: 233 aatatcgagctcaggtggagcgtgagttccagag 266
>gb|AF181688.1|AF181688 Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) mRNA, complete cds Length = 652 Score = 44.1 bits (22), Expect = 0.54 Identities = 88/110 (80%) Strand = Plus / Plus Query: 97 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 156 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 70 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 129 Query: 157 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 206 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 130 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 179
>emb|CR715651.2|CNS0GF5B Tetraodon nigroviridis full-length cDNA Length = 1034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ggaggctgatttccagagaaa 248 ||||||||||||||||||||| Sbjct: 852 ggaggctgatttccagagaaa 872
>gb|AC099558.2| Homo sapiens chromosome 3 clone RP11-680P23, complete sequence Length = 180049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gtaaatgctgccagggctgct 159 ||||||||||||||||||||| Sbjct: 56512 gtaaatgctgccagggctgct 56532
>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence Length = 199721 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tggaggctgatttccagagaa 247 ||||||||||||||||||||| Sbjct: 149858 tggaggctgatttccagagaa 149878
>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence Length = 196773 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gtaaatgctgccagggctgct 159 ||||||||||||||||||||| Sbjct: 134646 gtaaatgctgccagggctgct 134666
>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence Length = 188406 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 170354 gcagatggaggctgatttcc 170335
>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence Length = 215406 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aaattgtaaatgctgccagg 153 |||||||||||||||||||| Sbjct: 1962 aaattgtaaatgctgccagg 1943
>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence Length = 165179 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aaattgtaaatgctgccagg 153 |||||||||||||||||||| Sbjct: 21739 aaattgtaaatgctgccagg 21758
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence Length = 195918 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 acatctccccagaggtgattcaga 367 |||||||||||||||||| ||||| Sbjct: 170750 acatctccccagaggtgactcaga 170727
>gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome 14, complete sequence Length = 201316 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 acagctcaagcagcaggcag 340 |||||||||||||||||||| Sbjct: 30267 acagctcaagcagcaggcag 30248
>emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on chromosome 1 Contains the 3' end of the ATF6 gene for activating transcription factor 6, a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)(PSME1) pseudogene, the 3' end of a novel gene (DKFZP586L151) and a CpG island, complete sequence Length = 211662 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gatggaggctgatttccagagaaa 248 |||||||||||||| ||||||||| Sbjct: 30731 gatggaggctgattgccagagaaa 30708
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence Length = 186890 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 140680 gcagatggaggctgatttcc 140699
>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence Length = 196465 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 agaggcggagagagagatag 208 |||||||||||||||||||| Sbjct: 154900 agaggcggagagagagatag 154881
>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 agaggcggagagagagatag 208 |||||||||||||||||||| Sbjct: 160522 agaggcggagagagagatag 160541
>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 Length = 250050 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 tcgtaaattttgtcgattta 612 |||||||||||||||||||| Sbjct: 92868 tcgtaaattttgtcgattta 92887
>gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, complete sequence Length = 92418 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 gctgtaattccttgttcttt 519 |||||||||||||||||||| Sbjct: 17864 gctgtaattccttgttcttt 17845
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 taaaggttgatgagtcggcc 419 |||||||||||||||||||| Sbjct: 232829 taaaggttgatgagtcggcc 232848
>gb|AC106727.5| Homo sapiens 3q BAC RP11-534K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153692 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gagagagagatagctgagta 215 |||||||||||||||||||| Sbjct: 20110 gagagagagatagctgagta 20091
>gb|AC023538.7| Homo sapiens chromosome 8, clone RP11-510I21, complete sequence Length = 189543 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gagagagagatagctgagta 215 |||||||||||||||||||| Sbjct: 133588 gagagagagatagctgagta 133607
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence Length = 148807 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 68419 gcagatggaggctgatttcc 68400
>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence Length = 154436 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 acatctccccagaggtgattcaga 367 |||||||||||||||||| ||||| Sbjct: 122971 acatctccccagaggtgactcaga 122994
>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence Length = 185187 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 54778 gcagatggaggctgatttcc 54797
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence Length = 173206 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 80391 gcagatggaggctgatttcc 80410
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aggaaagcaaaagaagaggc 194 |||||||||||||||||||| Sbjct: 156263 aggaaagcaaaagaagaggc 156282
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 151083 gcagatggaggctgatttcc 151102
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 cgtgcgcagatggaggctgatttc 240 ||||||||||| |||||||||||| Sbjct: 20700 cgtgcgcagatcgaggctgatttc 20723
>emb|AJ438591.1|MCR438591 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit G (vha-G gene) Length = 587 Score = 40.1 bits (20), Expect = 8.5 Identities = 131/168 (77%) Strand = Plus / Plus Query: 156 tgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagta 215 |||||| ||||| || || ||| |||||||||||||||| || | ||||| ||||| | Sbjct: 130 tgctaagacggccagactaaggcaagcaaaagaagaggctgaaaaggagattgctgaatt 189 Query: 216 ccgtgcgcagatggaggctgatttccagagaaagctcaccgagaccagcggtgactctgg 275 |||||| || ||||| || ||| ||||||| ||| | |||| | ||| ||||| || Sbjct: 190 ccgtgcccaaatggaagccgatcatcagagaaggcttgcagagagtaccggagactcagg 249 Query: 276 tgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaaca 323 ||| ||||| || |||||||| ||||| || || | ||||||||||| Sbjct: 250 tgctaatgtgaagcgccttgaacaagaaaccaatgctaaaattgaaca 297
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 423254 gcagatggaggctgatttcc 423273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 240991 gcagatggaggctgatttcc 241010
>gb|AC005337.1|AC005337 Homo sapiens chromosome 19, cosmid R25269, complete sequence Length = 43581 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 aggcttaggaaagcaaaaga 188 |||||||||||||||||||| Sbjct: 14524 aggcttaggaaagcaaaaga 14505
>gb|CP000165.1| Drosophila melanogaster genomic scaffold 211000022278591 Length = 119078 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aaggcttaggaaagcaaaag 187 |||||||||||||||||||| Sbjct: 6302 aaggcttaggaaagcaaaag 6321
>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence Length = 192911 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aaattgtaaatgctgccagg 153 |||||||||||||||||||| Sbjct: 189609 aaattgtaaatgctgccagg 189590
>emb|AL355432.7|HS56F10 Homo sapiens chromosome 9 BAC RP11-56F10, complete sequence Length = 188491 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 atctgtttatttctttggga 467 |||||||||||||||||||| Sbjct: 52392 atctgtttatttctttggga 52373
>emb|AL355433.6|HS179D22 Homo sapiens chromosome 9 BAC RP11-179D22, complete sequence Length = 177219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 atctgtttatttctttggga 467 |||||||||||||||||||| Sbjct: 138176 atctgtttatttctttggga 138157
>gb|M99679.1|HUMIGH353X Human immunoglobulin heavy chain variable region V3-53 (IGHV@) gene, exons 1-2 Length = 724 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 608 gcagatggaggctgatttcc 627
>dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 3 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 23254 gcagatggaggctgatttcc 23273
>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 2 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcagatggaggctgatttcc 241 |||||||||||||||||||| Sbjct: 40991 gcagatggaggctgatttcc 41010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,361,648 Number of Sequences: 3902068 Number of extensions: 6361648 Number of successful extensions: 119121 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 118853 Number of HSP's gapped (non-prelim): 258 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)