ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9o18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds Length = 2850 Score = 646 bits (326), Expect = 0.0 Identities = 486/538 (90%), Gaps = 1/538 (0%) Strand = Plus / Plus Query: 1 tgaaaactgcagcaaattgttgaacccaactgagctaattgatccgaagtgtaaggtctg 60 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 568 tgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggtctg 627 Query: 61 taagaatgctccacgtattcgtgacacagnatcacttattcctggagcttcctctattga 120 ||||||| |||||||| | |||||||||| ||||||||||||| ||||||||||| |||| Sbjct: 628 taagaatactccacgtgtccgtgacacag-atcacttattccttgagcttcctcttttga 686 Query: 121 gtgataagttggtaaactatattaacaacacttcagtagctggtatgtggagtcaaaatg 180 | || ||||||||||||||||| || | ||||| ||||||||||||||||||||||||| Sbjct: 687 gcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagtcaaaatg 746 Query: 181 ctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgctgtatcaccagag 240 ||||||| ||||||||||||||| |||||||||| || |||| ||||||||||||| ||| Sbjct: 747 ctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatcacccgag 806 Query: 241 atcttaaatggggagttcctgttccacatgagaagtacaaagacaaggtgttctatgtct 300 |||| || ||||| |||||||||||||||||||| || || ||||||||||||||||| | Sbjct: 807 atctcaagtggggtgttcctgttccacatgagaaatataaggacaaggtgttctatgttt 866 Query: 301 ggtttgatgcaccaattgggtacatatcaattacagcatcatatacgcctgattgggaga 360 ||||||||||||| ||||| || |||| || ||||| || ||||| ||||||||||||| Sbjct: 867 ggtttgatgcaccgattggctatgtatctatcacagcttcctatacacctgattgggaga 926 Query: 361 agtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaagataatgttc 420 | |||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||| | Sbjct: 927 aatggtggaaggatcctgataacgtagaattgtttcagttcatgggtaaagataatgtgc 986 Query: 421 catttcacacggtcatgttcccttcaacactactgggaactggtgaaaactggacaatga 480 ||||||||||||||||||||||||| ||| |||| |||||||| ||||| |||||||||| Sbjct: 987 catttcacacggtcatgttcccttctacattacttggaactggcgaaaagtggacaatga 1046 Query: 481 tgaagaccataagtgttactgaatatttaaactatgaagcaggaaaattttccaagag 538 |||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1047 tgaagaccataagtgtgactgaatatttgaactacgaagcaggaaaattctccaagag 1104
>gb|AY109485.1| Zea mays CL580_1 mRNA sequence Length = 2647 Score = 297 bits (150), Expect = 2e-77 Identities = 290/339 (85%), Gaps = 1/339 (0%) Strand = Plus / Plus Query: 8 tgcagcaaattgttgaacccaactgagctaattgatccgaagtgtaaggtctgtaagaat 67 ||||||| |||||||| |||||||| || ||||| || ||||| ||||| |||||||| Sbjct: 474 tgcagcaccttgttgaatccaactgaacttattgacccaaagtgcaaggtttgtaagaac 533 Query: 68 gctccacgtattcgtgacacagnatcacttattcctggagcttcctctattgagtgataa 127 ||||||||||||||||||| | |||||||| |||||||||||||||||| || || Sbjct: 534 actccacgtattcgtgacac-ggatcacttannnnnggagcttcctctattgagagacaa 592 Query: 128 gttggtaaactatattaacaacacttcagtagctggtatgtggagtcaaaatgctattca 187 | |||||||||| || || | |||||||| |||||| |||||||||||||||||||||| Sbjct: 593 gctggtaaactacatcaatgaaacttcagttgctggtttgtggagtcaaaatgctattca 652 Query: 188 agcaacaaacgcatggttgaaggaagggttaaagcaacgctgtatcaccagagatcttaa 247 ||||||||| |||||| ||||||||||| |||||| |||||| ||||||||||||||||| Sbjct: 653 agcaacaaatgcatggctgaaggaagggctaaagccacgctgcatcaccagagatcttaa 712 Query: 248 atggggagttcctgttccacatgagaagtacaaagacaaggtgttctatgtctggtttga 307 |||||| |||||||| |||||||||| |||||||||||||||||||| |||||||| Sbjct: 713 atggggtgttcctgtnnnnnatgagaagtataaagacaaggtgttctatgtttggtttga 772 Query: 308 tgcaccaattgggtacatatcaattacagcatcatatac 346 |||||| || || ||| | || ||||| ||||| ||||| Sbjct: 773 tgcacctatcggctacgtgtctattacggcatcctatac 811 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 374 tcctgataatgtagagttgttccagttcatgggcaaagataatgttccatttcacacggt 433 ||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||||||| | Sbjct: 839 tcctgataatgtagaattgtttcagtttatgggcaaagataatgtgccgtttcacacgat 898 Query: 434 catgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccataag 493 ||||||||||||||| ||||| |||||||| ||||| |||||||||||||| || ||||| Sbjct: 899 catgttcccttcaacgctactcggaactggggaaaagtggacaatgatgaaaacgataag 958 Query: 494 tgttactgaatatttaaactatgaagcaggaaaattttccaagagt 539 ||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 959 tgttactgaatatttgaattatgaagcaggcaaattttccaagagt 1004
>ref|NM_196374.1| Oryza sativa (japonica cultivar-group) putative methionyl-tRNA synthetase (OSJNBa0050N08.15), mRNA Length = 1791 Score = 293 bits (148), Expect = 3e-76 Identities = 313/368 (85%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||| ||||| |||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 688 tggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgc 747 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 748 tgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaag 807 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 ||||||||||||||||||||||||||||| |||||||| || ||||| || | || ||| Sbjct: 808 gtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctacacg 867 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 ||||| |||||||| ||||||||| |||| || ||||| || |||| ||||||||||| Sbjct: 868 cctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgggt 927 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||| ||||| ||||| || |||||||||||||| || |||||||| |||||||| ||| Sbjct: 928 aaagacaatgtcccattccatacggtcatgttcccctccacactacttggaactggagaa 987 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 || ||||| |||||||||| || ||||| || || ||| | || |||||| ||||||| Sbjct: 988 aattggactctgatgaagacgattagtgtgacagagtatctcaattatgaatcaggaaag 1047 Query: 528 ttttccaa 535 || ||||| Sbjct: 1048 ttctccaa 1055
>dbj|AK067274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H24, full insert sequence Length = 2243 Score = 293 bits (148), Expect = 3e-76 Identities = 313/368 (85%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||| ||||| |||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 884 tggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgc 943 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 944 tgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaag 1003 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 ||||||||||||||||||||||||||||| |||||||| || ||||| || | || ||| Sbjct: 1004 gtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctacacg 1063 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 ||||| |||||||| ||||||||| |||| || ||||| || |||| ||||||||||| Sbjct: 1064 cctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgggt 1123 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||| ||||| ||||| || |||||||||||||| || |||||||| |||||||| ||| Sbjct: 1124 aaagacaatgtcccattccatacggtcatgttcccctccacactacttggaactggagaa 1183 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 || ||||| |||||||||| || ||||| || || ||| | || |||||| ||||||| Sbjct: 1184 aattggactctgatgaagacgattagtgtgacagagtatctcaattatgaatcaggaaag 1243 Query: 528 ttttccaa 535 || ||||| Sbjct: 1244 ttctccaa 1251
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 262 bits (132), Expect = 1e-66 Identities = 211/236 (89%), Gaps = 1/236 (0%) Strand = Plus / Minus Query: 54 aggtctgtaagaatgctccacgtattcgtgacacagnatcacttattcctggagcttcct 113 |||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||||||| Sbjct: 17934982 aggtctgtaagaatactccacgtgtccgtgacacag-atcacttattccttgagcttcct 17934924 Query: 114 ctattgagtgataagttggtaaactatattaacaacacttcagtagctggtatgtggagt 173 || ||||| || ||||||||||||||||| || | ||||| |||||||||||||||||| Sbjct: 17934923 cttttgagcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagt 17934864 Query: 174 caaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgctgtatc 233 |||||||||||||| ||||||||||||||| |||||||||| || |||| |||||||||| Sbjct: 17934863 caaaatgctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatc 17934804 Query: 234 accagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaaggt 289 ||| ||||||| || ||||| |||||||||||||||||||| || || |||||||| Sbjct: 17934803 acccgagatctcaagtggggtgttcctgttccacatgagaaatataaggacaaggt 17934748 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||| |||||||||||||| ||||| || |||| || ||||| || |||| Sbjct: 17934673 aggtgttctatgtttggtttgatgcaccgattggctatgtatctatcacagcttcctata 17934614 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 | |||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 17934613 cacctgattgggagaaatggtggaaggatcctgataacgtagaattgtttcagttcatgg 17934554 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||||||||| |||||||||||||| Sbjct: 17934553 gtaaagataatgtgccatttcacacggt 17934526 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 ||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||| Sbjct: 17933901 ggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagaccat 17933842 Query: 491 aagtgttactgaatatttaaactatgaagcagg 523 |||||| ||||||||||| ||||| |||||||| Sbjct: 17933841 aagtgtgactgaatatttgaactacgaagcagg 17933809 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 1 tgaaaactgcagcaaattgttgaacccaactgagctaattgatccgaagtgtaaggt 57 |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 17935147 tgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggt 17935091
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 262 bits (132), Expect = 1e-66 Identities = 211/236 (89%), Gaps = 1/236 (0%) Strand = Plus / Minus Query: 54 aggtctgtaagaatgctccacgtattcgtgacacagnatcacttattcctggagcttcct 113 |||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||||||| Sbjct: 1288 aggtctgtaagaatactccacgtgtccgtgacacag-atcacttattccttgagcttcct 1230 Query: 114 ctattgagtgataagttggtaaactatattaacaacacttcagtagctggtatgtggagt 173 || ||||| || ||||||||||||||||| || | ||||| |||||||||||||||||| Sbjct: 1229 cttttgagcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagt 1170 Query: 174 caaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgctgtatc 233 |||||||||||||| ||||||||||||||| |||||||||| || |||| |||||||||| Sbjct: 1169 caaaatgctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatc 1110 Query: 234 accagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaaggt 289 ||| ||||||| || ||||| |||||||||||||||||||| || || |||||||| Sbjct: 1109 acccgagatctcaagtggggtgttcctgttccacatgagaaatataaggacaaggt 1054 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||| |||||||||||||| ||||| || |||| || ||||| || |||| Sbjct: 979 aggtgttctatgtttggtttgatgcaccgattggctatgtatctatcacagcttcctata 920 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 | |||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 919 cacctgattgggagaaatggtggaaggatcctgataacgtagaattgtttcagttcatgg 860 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||||||||| |||||||||||||| Sbjct: 859 gtaaagataatgtgccatttcacacggt 832 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 ||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||| Sbjct: 207 ggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagaccat 148 Query: 491 aagtgttactgaatatttaaactatgaagcagg 523 |||||| ||||||||||| ||||| |||||||| Sbjct: 147 aagtgtgactgaatatttgaactacgaagcagg 115 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 1 tgaaaactgcagcaaattgttgaacccaactgagctaattgatccgaagtgtaaggt 57 |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1453 tgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggt 1397
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 262 bits (132), Expect = 1e-66 Identities = 211/236 (89%), Gaps = 1/236 (0%) Strand = Plus / Minus Query: 54 aggtctgtaagaatgctccacgtattcgtgacacagnatcacttattcctggagcttcct 113 |||||||||||||| |||||||| | |||||||||| ||||||||||||| ||||||||| Sbjct: 140171 aggtctgtaagaatactccacgtgtccgtgacacag-atcacttattccttgagcttcct 140113 Query: 114 ctattgagtgataagttggtaaactatattaacaacacttcagtagctggtatgtggagt 173 || ||||| || ||||||||||||||||| || | ||||| |||||||||||||||||| Sbjct: 140112 cttttgagcgacaagttggtaaactatatcaatgaaacttctgtagctggtatgtggagt 140053 Query: 174 caaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgctgtatc 233 |||||||||||||| ||||||||||||||| |||||||||| || |||| |||||||||| Sbjct: 140052 caaaatgctattcaggcaacaaacgcatggctgaaggaaggtttgaagccacgctgtatc 139993 Query: 234 accagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaaggt 289 ||| ||||||| || ||||| |||||||||||||||||||| || || |||||||| Sbjct: 139992 acccgagatctcaagtggggtgttcctgttccacatgagaaatataaggacaaggt 139937 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||| |||||||||||||| ||||| || |||| || ||||| || |||| Sbjct: 139862 aggtgttctatgtttggtttgatgcaccgattggctatgtatctatcacagcttcctata 139803 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 | |||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 139802 cacctgattgggagaaatggtggaaggatcctgataacgtagaattgtttcagttcatgg 139743 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||||||||| |||||||||||||| Sbjct: 139742 gtaaagataatgtgccatttcacacggt 139715 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 ||||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||| Sbjct: 139090 ggtcatgttcccttctacattacttggaactggcgaaaagtggacaatgatgaagaccat 139031 Query: 491 aagtgttactgaatatttaaactatgaagcagg 523 |||||| ||||||||||| ||||| |||||||| Sbjct: 139030 aagtgtgactgaatatttgaactacgaagcagg 138998 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 1 tgaaaactgcagcaaattgttgaacccaactgagctaattgatccgaagtgtaaggt 57 |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 140336 tgaaaactgcagcaaattgttgaatccaactgagctaattgatcccaagtgtaaggt 140280
>ref|NM_117452.3| Arabidopsis thaliana ATP binding / methionine-tRNA ligase/ tRNA binding / tRNA ligase AT4G13780 mRNA, complete cds Length = 2640 Score = 159 bits (80), Expect = 1e-35 Identities = 299/372 (80%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||||||||||||||||||| | ||||| |||||| | | ||| ||| | | || | Sbjct: 767 tggagtcaaaatgctattcaaacgacaaatgcatggcttagggatgggcttagacagaga 826 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || || || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 827 tgcattacgagggatcttaagtggggagtgcctgtcccacatgagaaatacaaggacaaa 886 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 || |||||||| ||||||||||| || ||||| ||| | ||||| || | | || || Sbjct: 887 gtcttctatgtttggtttgatgctcctattggatacgtctcaataacgtcttgctacaca 946 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 |||| |||||||||||||||||| ||||||| ||||| ||| | | ||||| ||||| Sbjct: 947 tctgaatgggagaagtggtggaagaatcctgagaatgtggagctttatcagtttatgggg 1006 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||| ||||| ||||||||||| || ||||| || || || | || ||||||| ||| Sbjct: 1007 aaagacaatgtgccatttcacactgtgatgtttccctctacccagcttggaactgaggaa 1066 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 || |||||| | |||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 1067 aattggacactcatgaagacaatcagtgtgactgaatatttaaactatgaagacggaaag 1126 Query: 528 ttttccaagagt 539 || ||||||||| Sbjct: 1127 ttctccaagagt 1138
>gb|AY091454.1| Arabidopsis thaliana putative methionyl-tRNA synthetase (At4g13780) mRNA, complete cds Length = 2425 Score = 159 bits (80), Expect = 1e-35 Identities = 299/372 (80%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||||||||||||||||||| | ||||| |||||| | | ||| ||| | | || | Sbjct: 685 tggagtcaaaatgctattcaaacgacaaatgcatggcttagggatgggcttagacagaga 744 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || || || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 745 tgcattacgagggatcttaagtggggagtgcctgtcccacatgagaaatacaaggacaaa 804 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 || |||||||| ||||||||||| || ||||| ||| | ||||| || | | || || Sbjct: 805 gtcttctatgtttggtttgatgctcctattggatacgtctcaataacgtcttgctacaca 864 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 |||| |||||||||||||||||| ||||||| ||||| ||| | | ||||| ||||| Sbjct: 865 tctgaatgggagaagtggtggaagaatcctgagaatgtggagctttatcagtttatgggg 924 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||| ||||| ||||||||||| || ||||| || || || | || ||||||| ||| Sbjct: 925 aaagacaatgtgccatttcacactgtgatgtttccctctacccagcttggaactgaggaa 984 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 || |||||| | |||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 985 aattggacactcatgaagacaatcagtgtgactgaatatttaaactatgaagacggaaag 1044 Query: 528 ttttccaagagt 539 || ||||||||| Sbjct: 1045 ttctccaagagt 1056
>gb|AY064009.1| Arabidopsis thaliana putative methionyl-tRNA synthetase (At4g13780) mRNA, complete cds Length = 2656 Score = 159 bits (80), Expect = 1e-35 Identities = 299/372 (80%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||||||||||||||||||| | ||||| |||||| | | ||| ||| | | || | Sbjct: 767 tggagtcaaaatgctattcaaacgacaaatgcatggcttagggatgggcttagacagaga 826 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || || || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 827 tgcattacgagggatcttaagtggggagtgcctgtcccacatgagaaatacaaggacaaa 886 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 || |||||||| ||||||||||| || ||||| ||| | ||||| || | | || || Sbjct: 887 gtcttctatgtttggtttgatgctcctattggatacgtctcaataacgtcttgctacaca 946 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 |||| |||||||||||||||||| ||||||| ||||| ||| | | ||||| ||||| Sbjct: 947 tctgaatgggagaagtggtggaagaatcctgagaatgtggagctttatcagtttatgggg 1006 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||| ||||| ||||||||||| || ||||| || || || | || ||||||| ||| Sbjct: 1007 aaagacaatgtgccatttcacactgtgatgtttccctctacccagcttggaactgaggaa 1066 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 || |||||| | |||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 1067 aattggacactcatgaagacaatcagtgtgactgaatatttaaactatgaagacggaaag 1126 Query: 528 ttttccaagagt 539 || ||||||||| Sbjct: 1127 ttctccaagagt 1138
>gb|BT013704.1| Lycopersicon esculentum clone 132546F, mRNA sequence Length = 2678 Score = 133 bits (67), Expect = 7e-28 Identities = 250/311 (80%) Strand = Plus / Plus Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 ||||| || |||||| | |||||||| ||||| ||||||||||| || || || |||||| Sbjct: 842 tgtataactagagatttgaaatggggggttccagttccacatgaaaaatataaggacaag 901 Query: 288 gtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacg 347 || || || || ||||||||||| || ||||| || |||| || || ||| || || Sbjct: 902 gttttttacgtgtggtttgatgctcctattggatatgtatctataacctcatgctacaca 961 Query: 348 cctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggc 407 |||| |||||||||||||||||| |||| || ||||| ||| | | ||||| |||||| Sbjct: 962 actgagtgggagaagtggtggaagaatccagagaatgtggagctctatcagtttatgggc 1021 Query: 408 aaagataatgttccatttcacacggtcatgttcccttcaacactactgggaactggtgaa 467 ||||||||||| || |||||||| || || ||||| || || || || |||||| ||||| Sbjct: 1022 aaagataatgtgccttttcacactgtgattttcccatctacgcttcttggaactcgtgaa 1081 Query: 468 aactggacaatgatgaagaccataagtgttactgaatatttaaactatgaagcaggaaaa 527 |||||||| | |||||||| || ||||| || ||||| || |||||||||||||| ||| Sbjct: 1082 aactggactcttatgaagacaattagtgtaacagaatacttgaactatgaagcaggcaaa 1141 Query: 528 ttttccaagag 538 || || ||||| Sbjct: 1142 ttctcaaagag 1152
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||| ||||| |||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 77930 tggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgc 77989 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 77990 tgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaag 78049 Query: 288 gt 289 || Sbjct: 78050 gt 78051 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||||||||||||||||||||| |||||||| || ||||| || | || | Sbjct: 78142 aggtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctaca 78201 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 ||||||| |||||||| ||||||||| |||| || ||||| || |||| |||||||||| Sbjct: 78202 cgcctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgg 78261 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||| ||||| ||||| || ||||| Sbjct: 78262 gtaaagacaatgtcccattccatacggt 78289 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 |||||||||||| || |||||||| |||||||| ||||| ||||| |||||||||| || Sbjct: 78431 ggtcatgttcccctccacactacttggaactggagaaaattggactctgatgaagacgat 78490 Query: 491 aagtgt 496 ||||| Sbjct: 78491 tagtgt 78496
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||| ||||| |||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 12979014 tggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgc 12979073 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 12979074 tgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaag 12979133 Query: 288 gt 289 || Sbjct: 12979134 gt 12979135 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||||||||||||||||||||| |||||||| || ||||| || | || | Sbjct: 12979226 aggtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctaca 12979285 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 ||||||| |||||||| ||||||||| |||| || ||||| || |||| |||||||||| Sbjct: 12979286 cgcctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgg 12979345 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||| ||||| ||||| || ||||| Sbjct: 12979346 gtaaagacaatgtcccattccatacggt 12979373 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 |||||||||||| || |||||||| |||||||| ||||| ||||| |||||||||| || Sbjct: 12979515 ggtcatgttcccctccacactacttggaactggagaaaattggactctgatgaagacgat 12979574 Query: 491 aagtgt 496 ||||| Sbjct: 12979575 tagtgt 12979580
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||| ||||| |||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 12986354 tggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgc 12986413 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 12986414 tgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaag 12986473 Query: 288 gt 289 || Sbjct: 12986474 gt 12986475 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 286 aggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatata 345 ||||||||||||||||||||||||||||||| |||||||| || ||||| || | || | Sbjct: 12986566 aggtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctaca 12986625 Query: 346 cgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgg 405 ||||||| |||||||| ||||||||| |||| || ||||| || |||| |||||||||| Sbjct: 12986626 cgcctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgg 12986685 Query: 406 gcaaagataatgttccatttcacacggt 433 | ||||| ||||| ||||| || ||||| Sbjct: 12986686 gtaaagacaatgtcccattccatacggt 12986713 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 431 ggtcatgttcccttcaacactactgggaactggtgaaaactggacaatgatgaagaccat 490 |||||||||||| || |||||||| |||||||| ||||| ||||| |||||||||| || Sbjct: 12986855 ggtcatgttcccctccacactacttggaactggagaaaattggactctgatgaagacgat 12986914 Query: 491 aagtgt 496 ||||| Sbjct: 12986915 tagtgt 12986920
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 244 ttaaatggggagttcctgttccacatgagaagtacaaagacaaggtgttctatgtctggt 303 |||| ||||| ||||||||||||| ||||||| |||||| ||||| ||||||||||||| Sbjct: 118022 ttaactggggcgttcctgttccactggagaagttcaaagaaaaggttttctatgtctggt 118081 Query: 304 ttgatgcacc 313 |||||||||| Sbjct: 118082 ttgatgcacc 118091
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence Length = 124550 Score = 79.8 bits (40), Expect = 9e-12 Identities = 115/140 (82%) Strand = Plus / Minus Query: 285 aaggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatat 344 |||||||||||||| ||||||||||| || ||||| || |||||||| || ||| || Sbjct: 81697 aaggtgttctatgtttggtttgatgctccgattggatatatatcaatcacggcaggctac 81638 Query: 345 acgcctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatg 404 || | |||||||||||| |||||||| | ||||| ||||| |||||||| ||||| ||| Sbjct: 81637 acacgtgattgggagaaatggtggaaaaaccctgagaatgtggagttgtttcagtttatg 81578 Query: 405 ggcaaagataatgttccatt 424 || || || ||||| ||||| Sbjct: 81577 ggaaaggacaatgtgccatt 81558 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 |||||||| |||||||||||| ||||||| ||||||| || || ||||| |||| Sbjct: 81894 tggagtcagaatgctattcaaacaacaaattcatggttcaaaatgggattaaaaaaacgt 81835 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaag 287 || || ||||||||||| || ||||| ||||||||||||||||| || |||| |||||| Sbjct: 81834 tgcattaccagagatctgaagtggggggttcctgttccacatgaaaaatacagtgacaag 81775 Query: 288 gt 289 || Sbjct: 81774 gt 81773
>ref|XM_636780.1| Dictyostelium discoideum methionine-tRNA ligase (DDB0231297), partial mRNA Length = 2211 Score = 67.9 bits (34), Expect = 3e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 291 ttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatatacgcct 350 ||||| || ||||| || ||||||||||| ||||| ||||| ||||| ||| || | Sbjct: 802 ttctacgtttggttcgacgcaccaattggttacatttcaatcacagctgaatacaccaat 861 Query: 351 gattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaa 410 || ||||||||||||||||| |||| || |||||| ||||| | || |||||||| ||| Sbjct: 862 gaatgggagaagtggtggaaaaatccagaaaatgtaaagttggtacaattcatgggtaaa 921 Query: 411 gataatgttccatt 424 |||||||| ||||| Sbjct: 922 gataatgtaccatt 935
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 349 ctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggca 408 |||| |||||||||||||||||| ||||||| ||||| ||| | | ||||| ||||| | Sbjct: 88393 ctgaatgggagaagtggtggaagaatcctgagaatgtggagctttatcagtttatgggga 88334 Query: 409 aagataatgttccatttcacac 430 |||| ||||| ||||||||||| Sbjct: 88333 aagacaatgtgccatttcacac 88312 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 456 ggaactggtgaaaactggacaatgatgaagaccataagtgttactgaatatttaaactat 515 ||||||| ||||| |||||| | |||||||| || ||||| |||||||||||||||||| Sbjct: 88070 ggaactgaggaaaattggacactcatgaagacaatcagtgtgactgaatatttaaactat 88011 Query: 516 gaag 519 |||| Sbjct: 88010 gaag 88007 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||||||||||||||||||| | ||||| |||||| | | ||| ||| | | || | Sbjct: 88645 tggagtcaaaatgctattcaaacgacaaatgcatggcttagggatgggcttagacagaga 88586 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaa 286 || || || || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 88585 tgcattacgagggatcttaagtggggagtgcctgtcccacatgagaaatacaaggacaa 88527
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 349 ctgattgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggca 408 |||| |||||||||||||||||| ||||||| ||||| ||| | | ||||| ||||| | Sbjct: 67301 ctgaatgggagaagtggtggaagaatcctgagaatgtggagctttatcagtttatgggga 67242 Query: 409 aagataatgttccatttcacac 430 |||| ||||| ||||||||||| Sbjct: 67241 aagacaatgtgccatttcacac 67220 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 456 ggaactggtgaaaactggacaatgatgaagaccataagtgttactgaatatttaaactat 515 ||||||| ||||| |||||| | |||||||| || ||||| |||||||||||||||||| Sbjct: 66978 ggaactgaggaaaattggacactcatgaagacaatcagtgtgactgaatatttaaactat 66919 Query: 516 gaag 519 |||| Sbjct: 66918 gaag 66915 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 168 tggagtcaaaatgctattcaagcaacaaacgcatggttgaaggaagggttaaagcaacgc 227 ||||||||||||||||||||| | ||||| |||||| | | ||| ||| | | || | Sbjct: 67553 tggagtcaaaatgctattcaaacgacaaatgcatggcttagggatgggcttagacagaga 67494 Query: 228 tgtatcaccagagatcttaaatggggagttcctgttccacatgagaagtacaaagacaa 286 || || || || |||||||| |||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 67493 tgcattacgagggatcttaagtggggagtgcctgtcccacatgagaaatacaaggacaa 67435
>gb|BC077353.1| Xenopus laevis methionine-tRNA synthetase, mRNA (cDNA clone MGC:81271 IMAGE:6631630), complete cds Length = 2911 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 281 agacaaggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagc 337 |||||||||||||||||||||||||||||| || ||||| || || || |||||||| Sbjct: 1548 agacaaggtgttctatgtctggtttgatgctcccattggctatatttctattacagc 1604
>gb|BC057757.1| Xenopus laevis hypothetical protein MGC69150, mRNA (cDNA clone MGC:69150 IMAGE:5048691), complete cds Length = 3010 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 281 agacaaggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagc 337 |||||||||||||||||||||||||||||| || ||||| || || || |||||||| Sbjct: 1660 agacaaggtgttctatgtctggtttgatgctcccattggctatatttctattacagc 1716
>ref|XM_754585.1| Ustilago maydis 521 hypothetical protein (UM03531.1) partial mRNA Length = 2505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 354 tgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaagat 413 |||||||| ||||||||| ||||||| ||||| || | | |||||||||||||||||| Sbjct: 1261 tgggagaaatggtggaagaatcctgacaatgtcaagctttaccagttcatgggcaaagac 1320 Query: 414 aatgttc 420 ||||||| Sbjct: 1321 aatgttc 1327
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 390 ttgttccagttcatgggcaaagataatgttccatttcacacggtcat 436 |||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1351071 ttgtaccagttcatgggcaaagacaatgttccattccacactgtcat 1351025
>ref|NM_212060.1| Eremothecium gossypii AGR332Cp (AGR332C), mRNA Length = 2253 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 390 ttgttccagttcatgggcaaagataatgttccatttcacacggtcat 436 |||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1432 ttgtaccagttcatgggcaaagacaatgttccattccacactgtcat 1478
>gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete sequence Length = 113967 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 285 aaggtgttctatgtctggtttgatgcaccaattgggtacatatcaattacagcatcatat 344 ||||| |||||||| ||||||||||| || ||||| || |||||||| || |||| || Sbjct: 57383 aaggttttctatgtgtggtttgatgcgcctattggttatatatcaatcaccgcatgctac 57442 Query: 345 acgcctgattgggagaagtggtggaa 370 || | |||||||||||| |||||||| Sbjct: 57443 acacatgattgggagaaatggtggaa 57468 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 224 acgctgtatcaccagagatcttaaatggggagttcctgttccacatga 271 ||||||||| || |||||||| || ||||| ||||||||||||||||| Sbjct: 57234 acgctgtataactagagatctgaagtggggggttcctgttccacatga 57281 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 450 ctactgggaactggtgaaaactggacaatgatgaagaccataagtgttactgaatattta 509 ||||| ||||| |||||||| ||||| | |||||||| || |||||||||||||| || Sbjct: 58259 ctactcggaaccggtgaaaattggactttaatgaagactattagtgttactgaatacttg 58318 Query: 510 aactatgaagcagg 523 || |||||| |||| Sbjct: 58319 aagtatgaatcagg 58332
>gb|BC111362.1| Bos taurus cDNA clone MGC:134096 IMAGE:8048743, complete cds Length = 2897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 ||||||||||||||||||||||||||||| Sbjct: 1588 gacaaggtgttctatgtctggtttgatgc 1616
>ref|NM_001038091.1| Bos taurus similar to methionine-tRNA synthetase (MGC134096), mRNA Length = 2897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 ||||||||||||||||||||||||||||| Sbjct: 1588 gacaaggtgttctatgtctggtttgatgc 1616
>ref|XM_747175.1| Aspergillus fumigatus Af293 methionyl-tRNA synthetase (Afu1g09010) partial mRNA Length = 1956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 198 gcatggttgaaggaagggttaaagcaacgctgtatcaccagagatcttaaatggggagtt 257 ||||||||||| ||||| |||||| | || | |||||||||||||| |||||||| ||| Sbjct: 700 gcatggttgaaagaaggcttaaaggaccgtggcatcaccagagatctcaaatggggtgtt 759 Query: 258 cctgttcc 265 || ||||| Sbjct: 760 ccagttcc 767
>ref|XM_509164.1| PREDICTED: Pan troglodytes similar to methionine-tRNA synthetase; methionyl-tRNA synthetase; methionine tRNA ligase (LOC452016), mRNA Length = 2780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1532 aagacaaggtattctatgtctggtttgatgc 1562
>gb|BC065187.1| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:5021529), partial cds Length = 2830 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1567 aagacaaggtattctatgtctggtttgatgc 1597
>ref|NM_004990.2| Homo sapiens methionine-tRNA synthetase (MARS), mRNA Length = 2795 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1555 aagacaaggtattctatgtctggtttgatgc 1585
>emb|Z49216.1|HSMXR9 H.sapiens mitoxantrone-resistance associated mRNA Length = 1550 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 266 aagacaaggtattctatgtctggtttgatgc 296
>emb|X94754.1|HSYMTRNH H.sapiens mRNA for yeast methionyl-tRNA synthetase homologue Length = 2779 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1539 aagacaaggtattctatgtctggtttgatgc 1569
>gb|BT007338.1| Homo sapiens methionine-tRNA synthetase mRNA, complete cds Length = 2703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1532 aagacaaggtattctatgtctggtttgatgc 1562
>emb|CR626104.1| full-length cDNA clone CS0CAP008YK22 of Thymus of Homo sapiens (human) Length = 1372 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 157 aagacaaggtattctatgtctggtttgatgc 187
>dbj|AK122956.1| Homo sapiens cDNA FLJ16674 fis, clone THYMU3008136, highly similar to Methionyl-tRNA synthetase (EC 6.1.1.10) Length = 3574 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 2218 aagacaaggtattctatgtctggtttgatgc 2248
>gb|BC015011.1|BC015011 Homo sapiens, methionine-tRNA synthetase, clone IMAGE:4864644, mRNA, partial cds Length = 2790 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1530 aagacaaggtattctatgtctggtttgatgc 1560
>dbj|AK222767.1| Homo sapiens mRNA for methionine-tRNA synthetase variant, clone: HEP00371 Length = 2738 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1552 aagacaaggtattctatgtctggtttgatgc 1582
>gb|AY889906.1| Synthetic construct Homo sapiens clone FLH022775.01X methionine-tRNA synthetase (MARS) mRNA, complete cds Length = 2703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1532 aagacaaggtattctatgtctggtttgatgc 1562
>gb|BC011639.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:12828 IMAGE:4120680), complete cds Length = 2799 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1540 aagacaaggtattctatgtctggtttgatgc 1570
>gb|BC011849.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:20313 IMAGE:4135154), complete cds Length = 2800 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1538 aagacaaggtattctatgtctggtttgatgc 1568
>gb|BC002384.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:8646 IMAGE:2961615), complete cds Length = 2799 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1538 aagacaaggtattctatgtctggtttgatgc 1568
>gb|BC006328.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:12889 IMAGE:4139330), complete cds Length = 2795 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1538 aagacaaggtattctatgtctggtttgatgc 1568
>dbj|D84224.1| Homo sapiens mRNA for methionyl tRNA synthetase, complete cds Length = 2800 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 280 aagacaaggtgttctatgtctggtttgatgc 310 |||||||||| |||||||||||||||||||| Sbjct: 1555 aagacaaggtattctatgtctggtttgatgc 1585
>ref|XM_388790.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08614.1) partial mRNA Length = 2022 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 354 tgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaagat 413 |||||||||||||||||| | ||||| || || || | | ||||||||||||||| || Sbjct: 964 tgggagaagtggtggaagaaccctgagaacgtcaagctttaccagttcatgggcaaggac 1023 Query: 414 aatgttccatttcacacggtcatgttccct 443 || |||||||| ||||| |||| |||||| Sbjct: 1024 aacgttccattccacaccatcatcttccct 1053
>ref|XM_964108.1| PREDICTED: Tribolium castaneum similar to CG15100-PA (LOC657661), mRNA Length = 2870 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 278 caaagacaaggtgttctatgtctggtttgatgcaccaattgggtacatatcaat 331 ||||||||||||||| || ||||||||||| || || ||||| ||||| ||||| Sbjct: 1506 caaagacaaggtgttttacgtctggtttgacgccccgattggctacatgtcaat 1559
>ref|XM_853945.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 5 (LOC474414), mRNA Length = 2741 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| |||||||||||||||||||| Sbjct: 1551 gacaaggtattctatgtctggtttgatgc 1579
>ref|XM_844439.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 3 (LOC474414), mRNA Length = 2735 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| |||||||||||||||||||| Sbjct: 1551 gacaaggtattctatgtctggtttgatgc 1579
>ref|XM_853869.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 4 (LOC474414), mRNA Length = 1965 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| |||||||||||||||||||| Sbjct: 1551 gacaaggtattctatgtctggtttgatgc 1579
>ref|XM_531646.2| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 1 (LOC474414), mRNA Length = 2784 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| |||||||||||||||||||| Sbjct: 1551 gacaaggtattctatgtctggtttgatgc 1579
>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence Length = 169497 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 atcaccagagatcttaaatgggg 253 ||||||||||||||||||||||| Sbjct: 43836 atcaccagagatcttaaatgggg 43814
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 354 tgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaaga 412 ||||| || ||||||||| ||||||| ||||||||| | | || |||||||||||||| Sbjct: 1182105 tgggaaaaatggtggaagaatcctgacaatgtagagctctatcaattcatgggcaaaga 1182163
>ref|XM_570588.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND04250) partial mRNA Length = 2252 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 354 tgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaaga 412 ||||| || ||||||||| ||||||| ||||||||| | | || |||||||||||||| Sbjct: 988 tgggaaaaatggtggaagaatcctgacaatgtagagctctatcaattcatgggcaaaga 1046
>ref|XM_647775.1| Entamoeba histolytica HM-1:IMSS methionyl-tRNA synthetase, putative (102.t00015) partial mRNA Length = 2265 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 tgtatcaccagagatcttaaatgggga 254 |||||||| |||||||||||||||||| Sbjct: 727 tgtatcacaagagatcttaaatgggga 753 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 294 tatgtctggtttgatgcaccaattgg 319 ||||| |||||||||||||||||||| Sbjct: 793 tatgtttggtttgatgcaccaattgg 818
>gb|BT024103.1| Zea mays clone EL01N0522A02 mRNA sequence Length = 1706 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 513 tatgaagcaggaaaattttccaagagt 539 ||||||||||| ||||||||||||||| Sbjct: 17 tatgaagcaggcaaattttccaagagt 43
>ref|XM_368198.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01046.4) partial mRNA Length = 2103 Score = 44.1 bits (22), Expect = 0.47 Identities = 73/90 (81%) Strand = Plus / Plus Query: 354 tgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaaagat 413 |||||||||||||||||| | || || ||||| | |||| |||||| |||||||| || Sbjct: 958 tgggagaagtggtggaagaaccccgaaaatgttaaattgtaccagtttatgggcaaggac 1017 Query: 414 aatgttccatttcacacggtcatgttccct 443 || ||||| || ||||| |||| |||||| Sbjct: 1018 aacgttcctttccacaccatcatcttccct 1047
>ref|XM_959545.1| Neurospora crassa OR74A hypothetical protein (NCU07451.1) partial mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 352 attgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaa 409 |||||||||||||||||||| | || ||||| || |||| ||||||||||||||| Sbjct: 947 attgggagaagtggtggaagaaccccgataacgtcaccttgtaccagttcatgggcaa 1004
>ref|XM_327736.1| Neurospora crassa OR74A hypothetical protein (NCU07451.1) partial mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 352 attgggagaagtggtggaaggatcctgataatgtagagttgttccagttcatgggcaa 409 |||||||||||||||||||| | || ||||| || |||| ||||||||||||||| Sbjct: 947 attgggagaagtggtggaagaaccccgataacgtcaccttgtaccagttcatgggcaa 1004
>emb|AL109652.1|SPBC17A3 S.pombe chromosome II cosmid c17A3 Length = 21343 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 396 cagttcatgggcaaagataatgttccatttcacacggtcatgttcccttc 445 ||||| ||||| ||||||||||||||||| || || || || |||||||| Sbjct: 7911 cagtttatgggtaaagataatgttccattccatactgttattttcccttc 7862
>ref|NM_001021482.1| Schizosaccharomyces pombe 972h- methionyl-tRNA synthetase (SPBC17A3.04c), partial mRNA Length = 2349 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 396 cagttcatgggcaaagataatgttccatttcacacggtcatgttcccttc 445 ||||| ||||| ||||||||||||||||| || || || || |||||||| Sbjct: 1522 cagtttatgggtaaagataatgttccattccatactgttattttcccttc 1571
>emb|CR293524.10| Zebrafish DNA sequence from clone DKEY-57M7 in linkage group 18, complete sequence Length = 190196 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 509 aaactatgaagcaggaaaattt 530 |||||||||||||||||||||| Sbjct: 34889 aaactatgaagcaggaaaattt 34868
>dbj|AB004537.1| Schizosaccharomyces pombe 37 kb genomic DNA, clone c213 Length = 37187 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 396 cagttcatgggcaaagataatgttccatttcacacggtcatgttcccttc 445 ||||| ||||| ||||||||||||||||| || || || || |||||||| Sbjct: 15567 cagtttatgggtaaagataatgttccattccatactgttattttcccttc 15616
>gb|CP000013.1| Borrelia garinii PBi, complete genome Length = 904246 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 294 tatgtctggtttgatgcaccaattgggtacatatcaattac 334 ||||||||||||||||| ||||| || || || |||||||| Sbjct: 608157 tatgtctggtttgatgctccaataggatatatttcaattac 608117
>ref|XM_462423.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G21549g) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| || ||||||||||||||||| Sbjct: 1324 gacaaggtcttgtatgtctggtttgatgc 1352
>gb|AE006066.1| Pasteurella multocida subsp. multocida str. Pm70 section 33 of 204 of the complete genome Length = 11017 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 291 ttctatgtctggtttgatgcaccaattgg 319 |||||||||||||| ||||| |||||||| Sbjct: 2566 ttctatgtctggttagatgccccaattgg 2594
>ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA synthetase (CaO19_11437), mRNA Length = 2247 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 402 atgggcaaagataatgttccatttcacac 430 ||||| ||||||||||||||||| ||||| Sbjct: 1438 atgggtaaagataatgttccattccacac 1466
>ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA synthetase (CaO19_3955), mRNA Length = 2247 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 402 atgggcaaagataatgttccatttcacac 430 ||||| ||||||||||||||||| ||||| Sbjct: 1438 atgggtaaagataatgttccattccacac 1466
>ref|XM_653892.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1380.2), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 agagatcttaaatggggagttcctgttcc 265 ||||||||||||||||| ||||| ||||| Sbjct: 739 agagatcttaaatggggtgttcccgttcc 767
>ref|XM_506024.1| Yarrowia lipolytica CLIB122, YALI0F29843g predicted mRNA Length = 2253 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 395 ccagttcatgggcaaagataatgttccatttcacacggtcatgttccct 443 ||||||||||||||| ||||| || || || ||||| ||||| |||||| Sbjct: 1440 ccagttcatgggcaaggataacgtccccttccacactgtcattttccct 1488
>emb|AL162291.14| Human DNA sequence from clone RP11-402F1 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 98399 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tatgaagcaggaaaattttcc 533 ||||||||||||||||||||| Sbjct: 41002 tatgaagcaggaaaattttcc 40982
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 283 acaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||||| || ||||| ||||||||||| |||||||| Sbjct: 715621 acaaggtattttatgtatggtttgatgctccaattgg 715585
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| || ||||||||||||||||| Sbjct: 1642639 gacaaggtcttgtatgtctggtttgatgc 1642611
>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence Length = 188276 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cacttattcctggagcttcct 113 ||||||||||||||||||||| Sbjct: 116529 cacttattcctggagcttcct 116549
>gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172136 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 aggtgttctatgtctggtttgatgc 310 |||| |||||||||||||||||||| Sbjct: 96080 aggtattctatgtctggtttgatgc 96056
>ref|XM_216910.3| PREDICTED: Rattus norvegicus methionine-tRNA synthetase (predicted) (Mars_predicted), mRNA Length = 2824 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 gacaaggtgttctatgtctggtttgatgc 310 |||||||| || ||||||||||||||||| Sbjct: 1597 gacaaggtattttatgtctggtttgatgc 1625
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome Length = 910724 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 294 tatgtctggtttgatgcaccaattgggtacatatcaattac 334 ||||| ||||||||||| ||||| || ||||| |||||||| Sbjct: 606227 tatgtgtggtttgatgctccaataggatacatttcaattac 606187
>gb|L32146.1|BORMETG Borrelia burgdorferi methionyl tRNA synthetase (metG) gene, partial cds Length = 346 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 294 tatgtctggtttgatgcaccaattgggtacatatcaattac 334 ||||| ||||||||||| ||||| || ||||| |||||||| Sbjct: 23 tatgtgtggtttgatgctccaataggatacatttcaattac 63
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Minus Query: 395 ccagttcatgggcaaagataatgttccatttcacacggtcatgttccct 443 ||||||||||||||| ||||| || || || ||||| ||||| |||||| Sbjct: 3734675 ccagttcatgggcaaggataacgtccccttccacactgtcattttccct 3734627
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 tatacgcctgattgggagaa 361 |||||||||||||||||||| Sbjct: 95068 tatacgcctgattgggagaa 95087
>gb|AY423024.1| Danio rerio methionine-tRNA synthetase (MARS) mRNA, complete cds Length = 3191 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 1703 tacaaggagaaggtgttctatgtgtggttcgatgctcctattgg 1746
>gb|AY648846.1| Danio rerio methionine-tRNA synthetase mRNA, complete cds Length = 3151 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 1703 tacaaggagaaggtgttctatgtgtggttcgatgctcctattgg 1746
>ref|XM_451421.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09647g predicted mRNA Length = 2334 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 399 ttcatgggcaaagataatgttccatttcacac 430 |||||||| ||||||||||| ||||| ||||| Sbjct: 1525 ttcatgggtaaagataatgtcccattccacac 1556
>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence Length = 233685 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gtggagtcaaaatgctattc 186 |||||||||||||||||||| Sbjct: 39117 gtggagtcaaaatgctattc 39136
>gb|AC127697.3| Mus musculus chromosome 15 clone RP24-83I10, complete sequence Length = 205653 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 agttcatgggcaaagataat 416 |||||||||||||||||||| Sbjct: 128396 agttcatgggcaaagataat 128415
>gb|BC057463.1| Danio rerio methionine-tRNA synthetase, mRNA (cDNA clone MGC:66122 IMAGE:2639182), complete cds Length = 3143 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 1684 tacaaggagaaggtgttctatgtgtggttcgatgctcctattgg 1727
>gb|BC046899.1| Danio rerio methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:3818335), partial cds Length = 3151 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 1703 tacaaggagaaggtgttctatgtgtggttcgatgctcctattgg 1746
>emb|BX927247.20| Zebrafish DNA sequence from clone CH211-189K22 in linkage group 6, complete sequence Length = 160349 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tgaaaactgcagcaaattgt 20 |||||||||||||||||||| Sbjct: 130069 tgaaaactgcagcaaattgt 130050
>emb|CR392006.7| Zebrafish DNA sequence from clone DKEYP-57F11 in linkage group 3, complete sequence Length = 99278 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 aagtgttactgaatatttaaacta 514 ||||| |||||||||||||||||| Sbjct: 35374 aagtgatactgaatatttaaacta 35351
>ref|XM_793490.1| PREDICTED: Strongylocentrotus purpuratus similar to methionine-tRNA synthetase (LOC594037), partial mRNA Length = 1649 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 |||| ||| |||||||||||||| |||| |||||| || ||||| Sbjct: 1072 tacacagataaggtgttctatgtatggtatgatgctcctattgg 1115
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 399 ttcatgggcaaagataatgttccatttcacac 430 |||||||| ||||||||||| ||||| ||||| Sbjct: 845054 ttcatgggtaaagataatgtcccattccacac 845023
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tatgtctggtttgatgcacc 313 |||||||||||||||||||| Sbjct: 809251 tatgtctggtttgatgcacc 809270
>emb|CR855397.9| Zebrafish DNA sequence from clone CH73-77E20 in linkage group 18, complete sequence Length = 104077 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 aaactatgaagcaggaaaat 528 |||||||||||||||||||| Sbjct: 91436 aaactatgaagcaggaaaat 91417
>emb|BX005322.8| Zebrafish DNA sequence from clone DKEY-195H23 in linkage group 18, complete sequence Length = 65266 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 aaactatgaagcaggaaaat 528 |||||||||||||||||||| Sbjct: 47424 aaactatgaagcaggaaaat 47443
>ref|NM_200076.1| Danio rerio methionine-tRNA synthetase (mars), mRNA Length = 3191 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 tacaaagacaaggtgttctatgtctggtttgatgcaccaattgg 319 ||||| || |||||||||||||| ||||| ||||| || ||||| Sbjct: 1703 tacaaggagaaggtgttctatgtgtggttcgatgctcctattgg 1746
>gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3, complete sequence Length = 220715 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 agttcatgggcaaagataat 416 |||||||||||||||||||| Sbjct: 146993 agttcatgggcaaagataat 146974
>emb|AJ581528.1|TMI581528 Tuberose mild mottle virus partial ORF1 for polyprotein, genomic RNA Length = 4607 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 gatcctgataatgtagagttgttc 395 |||||||| ||||||||||||||| Sbjct: 3731 gatcctgaaaatgtagagttgttc 3708
>gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, complete sequence Length = 176921 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 agttcatgggcaaagataat 416 |||||||||||||||||||| Sbjct: 52768 agttcatgggcaaagataat 52787
>ref|XM_397235.2| PREDICTED: Apis mellifera similar to ENSANGP00000010004 (LOC413796), mRNA Length = 3181 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 408 aaagataatgttccatttcacacggtcatgttccct 443 |||||||||||||||||||| | ||||||||||| Sbjct: 1661 aaagataatgttccatttcatgcaatcatgttccct 1696
>gb|AC080018.14|AC080018 Mus musculus 3 BAC RP23-200E11 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 209643 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 actggacaatgatgaagaccataa 492 ||||||||||||||||| |||||| Sbjct: 100880 actggacaatgatgaagtccataa 100903
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tgataatgtagagttgttcc 396 |||||||||||||||||||| Sbjct: 2075234 tgataatgtagagttgttcc 2075215
>emb|BX005474.6| Zebrafish DNA sequence from clone CH211-141E22 in linkage group 18, complete sequence Length = 106095 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 aaactatgaagcaggaaaat 528 |||||||||||||||||||| Sbjct: 93410 aaactatgaagcaggaaaat 93391
>gb|AC133953.3| Mus musculus BAC clone RP23-144D4 from chromosome 3, complete sequence Length = 196827 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ggtacatatcaattacagca 338 |||||||||||||||||||| Sbjct: 79308 ggtacatatcaattacagca 79289
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tattcctggagcttcctcta 116 |||||||||||||||||||| Sbjct: 114014 tattcctggagcttcctcta 114033
>emb|AL606832.4| Mouse DNA sequence from clone RP23-346G22 on chromosome 3, complete sequence Length = 157428 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 actggacaatgatgaagaccataa 492 ||||||||||||||||| |||||| Sbjct: 94017 actggacaatgatgaagtccataa 93994 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,787,028 Number of Sequences: 3902068 Number of extensions: 4787028 Number of successful extensions: 91581 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 91206 Number of HSP's gapped (non-prelim): 362 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
