Clone Name | bags9o14 |
---|---|
Clone Library Name | barley_pub |
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 357 cggtggagatcgtgttccagagc 379 ||||||||||||||||||||||| Sbjct: 167364 cggtggagatcgtgttccagagc 167386
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 357 cggtggagatcgtgttccagagc 379 ||||||||||||||||||||||| Sbjct: 8850863 cggtggagatcgtgttccagagc 8850841
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 357 cggtggagatcgtgttccagagc 379 ||||||||||||||||||||||| Sbjct: 8922526 cggtggagatcgtgttccagagc 8922504
>gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds Length = 2156 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 356 acggtggagatcgtgttccagagcccggtg 385 ||||||||||||||| |||||| ||||||| Sbjct: 1381 acggtggagatcgtgctccagaacccggtg 1410
>gb|AC151314.2| Xenopus tropicalis clone ISB-195A7, complete sequence Length = 108847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 tttgggacccatgattaata 176 |||||||||||||||||||| Sbjct: 98197 tttgggacccatgattaata 98178
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 ggctgcggtacaatgccacggtgg 362 ||||| |||||||||||||||||| Sbjct: 16376890 ggctgtggtacaatgccacggtgg 16376913
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 taacatgagcagcattagca 251 |||||||||||||||||||| Sbjct: 63289 taacatgagcagcattagca 63308
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete sequence Length = 267607 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 taacatgagcagcattagca 251 |||||||||||||||||||| Sbjct: 139828 taacatgagcagcattagca 139847
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 ggctgcggtacaatgccacggtgg 362 ||||| |||||||||||||||||| Sbjct: 16330123 ggctgtggtacaatgccacggtgg 16330146
>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127989 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 ggctgcggtacaatgccacggtgg 362 ||||| |||||||||||||||||| Sbjct: 75501 ggctgtggtacaatgccacggtgg 75478
>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence Length = 186518 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 tctgtccacatggcgaatcatcct 146 ||||||||||||| |||||||||| Sbjct: 110719 tctgtccacatggtgaatcatcct 110696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,574,775 Number of Sequences: 3902068 Number of extensions: 2574775 Number of successful extensions: 39997 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39932 Number of HSP's gapped (non-prelim): 65 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)